2024-07-08 14:21:31,307 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 14:21:31,624 Running on GPU
2024-07-08 14:21:35,562 Found 6 citations for tools or databases
2024-07-08 14:21:35,562 Query 1/1: APBB3_MYBPH (length 963)
2024-07-08 14:21:36,036 Sleeping for 7s. Reason: PENDING
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2024-07-08 14:21:51,413 Sleeping for 5s. Reason: RUNNING
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2024-07-08 14:22:09,712 Sleeping for 7s. Reason: RUNNING
2024-07-08 14:22:17,144 Sleeping for 6s. Reason: RUNNING
2024-07-08 14:22:23,558 Sleeping for 7s. Reason: RUNNING
2024-07-08 14:22:30,999 Sleeping for 9s. Reason: RUNNING
2024-07-08 14:22:40,428 Sleeping for 10s. Reason: RUNNING
2024-07-08 14:22:50,850 Sleeping for 9s. Reason: RUNNING
2024-07-08 14:23:00,264 Sleeping for 10s. Reason: RUNNING
2024-07-08 14:23:10,685 Sleeping for 9s. Reason: RUNNING
2024-07-08 14:23:20,129 Sleeping for 8s. Reason: RUNNING
2024-07-08 14:23:30,043 Sleeping for 7s. Reason: RUNNING
2024-07-08 14:23:37,457 Sleeping for 6s. Reason: RUNNING
2024-07-08 14:23:43,885 Sleeping for 6s. Reason: RUNNING
2024-07-08 14:23:50,473 Sleeping for 6s. Reason: RUNNING
2024-07-08 14:23:56,881 Sleeping for 8s. Reason: RUNNING
2024-07-08 14:24:05,290 Sleeping for 7s. Reason: RUNNING
2024-07-08 14:24:12,707 Sleeping for 8s. Reason: RUNNING
2024-07-08 14:24:21,136 Sleeping for 7s. Reason: RUNNING
2024-07-08 14:24:29,588 Sleeping for 7s. Reason: RUNNING
2024-07-08 14:24:37,012 Sleeping for 6s. Reason: RUNNING
2024-07-08 14:24:43,424 Sleeping for 8s. Reason: RUNNING
2024-07-08 14:24:51,842 Sleeping for 6s. Reason: RUNNING
2024-07-08 14:24:58,763 Sleeping for 5s. Reason: RUNNING
2024-07-08 14:25:04,176 Sleeping for 5s. Reason: RUNNING
2024-07-08 14:25:10,113 Sleeping for 7s. Reason: RUNNING
2024-07-08 14:25:17,556 Sleeping for 6s. Reason: RUNNING
2024-07-08 14:25:23,972 Sleeping for 8s. Reason: RUNNING
2024-07-08 14:25:39,408 Sleeping for 7s. Reason: PENDING
2024-07-08 14:25:46,827 Sleeping for 10s. Reason: RUNNING
2024-07-08 14:25:57,260 Sleeping for 9s. Reason: RUNNING
2024-07-08 14:26:06,693 Sleeping for 8s. Reason: RUNNING
2024-07-08 14:26:15,124 Sleeping for 10s. Reason: RUNNING
2024-07-08 14:26:25,563 Sleeping for 5s. Reason: RUNNING
2024-07-08 14:26:30,995 Sleeping for 8s. Reason: RUNNING
2024-07-08 14:26:39,426 Sleeping for 10s. Reason: RUNNING
2024-07-08 14:26:52,999 Setting max_seq=508, max_extra_seq=2048
2024-07-08 14:29:49,749 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.9 pTM=0.342 ipTM=0.177
2024-07-08 14:30:10,700 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.8 pTM=0.342 ipTM=0.188 tol=7.31
2024-07-08 14:30:31,731 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.2 pTM=0.329 ipTM=0.179 tol=4.5
2024-07-08 14:30:52,845 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.3 pTM=0.323 ipTM=0.169 tol=4.82
2024-07-08 14:31:13,993 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.1 pTM=0.321 ipTM=0.166 tol=4.26
2024-07-08 14:31:35,152 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.7 pTM=0.317 ipTM=0.163 tol=4.5
2024-07-08 14:31:56,314 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.4 pTM=0.315 ipTM=0.159 tol=5.05
2024-07-08 14:32:17,486 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.1 pTM=0.316 ipTM=0.157 tol=3.34
2024-07-08 14:32:38,684 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61 pTM=0.318 ipTM=0.155 tol=3.58
2024-07-08 14:32:59,913 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.1 pTM=0.318 ipTM=0.157 tol=4.14
2024-07-08 14:33:21,153 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.7 pTM=0.321 ipTM=0.156 tol=3.04
2024-07-08 14:33:42,394 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.8 pTM=0.321 ipTM=0.157 tol=3.07
2024-07-08 14:34:03,645 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.4 pTM=0.32 ipTM=0.155 tol=1.54
2024-07-08 14:34:24,902 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.4 pTM=0.317 ipTM=0.156 tol=3.16
2024-07-08 14:34:46,159 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61 pTM=0.319 ipTM=0.155 tol=2.59
2024-07-08 14:35:07,399 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.8 pTM=0.319 ipTM=0.157 tol=2.57
2024-07-08 14:35:28,665 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.4 pTM=0.321 ipTM=0.153 tol=1.71
2024-07-08 14:35:49,925 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.5 pTM=0.322 ipTM=0.154 tol=1.81
2024-07-08 14:36:11,184 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.4 pTM=0.323 ipTM=0.153 tol=2.48
2024-07-08 14:36:32,454 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.5 pTM=0.321 ipTM=0.154 tol=2.19
2024-07-08 14:36:53,726 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.2 pTM=0.317 ipTM=0.153 tol=2.35
2024-07-08 14:37:15,006 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.3 pTM=0.318 ipTM=0.155 tol=2.26
2024-07-08 14:37:36,272 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.9 pTM=0.32 ipTM=0.156 tol=2
2024-07-08 14:37:57,543 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.7 pTM=0.321 ipTM=0.154 tol=1.86
2024-07-08 14:38:18,814 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.8 pTM=0.321 ipTM=0.155 tol=2.33
2024-07-08 14:38:40,074 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.6 pTM=0.321 ipTM=0.154 tol=2.46
2024-07-08 14:39:01,327 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.6 pTM=0.322 ipTM=0.155 tol=1.59
2024-07-08 14:39:22,595 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.2 pTM=0.322 ipTM=0.154 tol=2.2
2024-07-08 14:39:43,858 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.6 pTM=0.323 ipTM=0.157 tol=2.07
2024-07-08 14:40:05,123 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.2 pTM=0.322 ipTM=0.156 tol=1.16
2024-07-08 14:40:26,397 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.6 pTM=0.316 ipTM=0.161 tol=2.8
2024-07-08 14:40:26,398 alphafold2_multimer_v3_model_1_seed_000 took 808.0s (30 recycles)
2024-07-08 14:40:48,260 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64 pTM=0.354 ipTM=0.193
2024-07-08 14:41:09,561 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.5 pTM=0.349 ipTM=0.187 tol=5.3
2024-07-08 14:41:30,864 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.7 pTM=0.343 ipTM=0.184 tol=4.91
2024-07-08 14:41:52,177 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.8 pTM=0.345 ipTM=0.19 tol=5.33
2024-07-08 14:42:13,492 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.3 pTM=0.348 ipTM=0.188 tol=4.82
2024-07-08 14:42:34,806 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.9 pTM=0.344 ipTM=0.186 tol=2.68
2024-07-08 14:42:56,120 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.6 pTM=0.339 ipTM=0.176 tol=3.55
2024-07-08 14:43:17,440 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.4 pTM=0.334 ipTM=0.167 tol=2.97
2024-07-08 14:43:38,759 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.2 pTM=0.334 ipTM=0.165 tol=2.72
2024-07-08 14:44:00,093 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.6 pTM=0.334 ipTM=0.16 tol=2.67
2024-07-08 14:44:21,427 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.5 pTM=0.333 ipTM=0.157 tol=3.23
2024-07-08 14:44:42,773 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.5 pTM=0.332 ipTM=0.156 tol=4.62
2024-07-08 14:45:04,119 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.3 pTM=0.332 ipTM=0.158 tol=3.61
2024-07-08 14:45:25,461 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.2 pTM=0.329 ipTM=0.156 tol=1.98
2024-07-08 14:45:46,811 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.4 pTM=0.331 ipTM=0.154 tol=1.47
2024-07-08 14:46:08,153 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.5 pTM=0.331 ipTM=0.155 tol=4.89
2024-07-08 14:46:29,485 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.1 pTM=0.332 ipTM=0.154 tol=6.14
2024-07-08 14:46:50,819 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.6 pTM=0.333 ipTM=0.153 tol=3.25
2024-07-08 14:47:12,142 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.4 pTM=0.333 ipTM=0.152 tol=3.32
2024-07-08 14:47:33,459 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.1 pTM=0.333 ipTM=0.156 tol=2.65
2024-07-08 14:47:54,773 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64 pTM=0.331 ipTM=0.157 tol=2.37
2024-07-08 14:48:16,093 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.6 pTM=0.332 ipTM=0.155 tol=3.53
2024-07-08 14:48:37,424 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.6 pTM=0.333 ipTM=0.15 tol=3.28
2024-07-08 14:48:58,748 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.5 pTM=0.331 ipTM=0.149 tol=2.83
2024-07-08 14:49:20,068 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.5 pTM=0.333 ipTM=0.152 tol=2.39
2024-07-08 14:49:41,395 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.7 pTM=0.332 ipTM=0.15 tol=1.98
2024-07-08 14:50:02,721 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.7 pTM=0.334 ipTM=0.152 tol=1.79
2024-07-08 14:50:24,050 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.9 pTM=0.332 ipTM=0.152 tol=1.91
2024-07-08 14:50:45,380 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.5 pTM=0.331 ipTM=0.153 tol=1.39
2024-07-08 14:51:06,692 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.6 pTM=0.331 ipTM=0.154 tol=2.98
2024-07-08 14:51:28,012 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.4 pTM=0.334 ipTM=0.162 tol=3.64
2024-07-08 14:51:28,013 alphafold2_multimer_v3_model_2_seed_000 took 661.0s (30 recycles)
2024-07-08 14:51:49,940 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.1 pTM=0.333 ipTM=0.146
2024-07-08 14:52:11,299 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.4 pTM=0.339 ipTM=0.155 tol=7.77
2024-07-08 14:52:32,672 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.4 pTM=0.333 ipTM=0.143 tol=3.74
2024-07-08 14:52:54,050 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.8 pTM=0.334 ipTM=0.145 tol=5.71
2024-07-08 14:53:15,431 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.9 pTM=0.334 ipTM=0.145 tol=4.9
2024-07-08 14:53:36,801 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.4 pTM=0.333 ipTM=0.146 tol=3.39
2024-07-08 14:53:58,186 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.8 pTM=0.332 ipTM=0.145 tol=3.76
2024-07-08 14:54:19,569 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.7 pTM=0.333 ipTM=0.147 tol=2.28
2024-07-08 14:54:40,950 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.6 pTM=0.335 ipTM=0.149 tol=2.57
2024-07-08 14:55:02,328 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.6 pTM=0.337 ipTM=0.149 tol=3.1
2024-07-08 14:55:23,706 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.7 pTM=0.338 ipTM=0.149 tol=2.75
2024-07-08 14:55:45,081 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.6 pTM=0.338 ipTM=0.15 tol=3.02
2024-07-08 14:56:06,452 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.5 pTM=0.338 ipTM=0.151 tol=3.39
2024-07-08 14:56:27,831 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.7 pTM=0.337 ipTM=0.151 tol=1.91
2024-07-08 14:56:49,207 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.6 pTM=0.338 ipTM=0.149 tol=2.49
2024-07-08 14:57:10,588 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.5 pTM=0.338 ipTM=0.147 tol=2.77
2024-07-08 14:57:31,961 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.3 pTM=0.338 ipTM=0.15 tol=4.06
2024-07-08 14:57:53,346 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.6 pTM=0.339 ipTM=0.147 tol=3.1
2024-07-08 14:58:14,732 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62 pTM=0.338 ipTM=0.149 tol=3.46
2024-07-08 14:58:36,130 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.2 pTM=0.34 ipTM=0.151 tol=3.7
2024-07-08 14:58:57,524 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.7 pTM=0.338 ipTM=0.151 tol=4.04
2024-07-08 14:59:18,927 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.7 pTM=0.337 ipTM=0.149 tol=3.6
2024-07-08 14:59:40,335 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.1 pTM=0.335 ipTM=0.145 tol=4.04
2024-07-08 15:00:01,743 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62 pTM=0.336 ipTM=0.146 tol=2.79
2024-07-08 15:00:23,144 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.5 pTM=0.338 ipTM=0.15 tol=5.03
2024-07-08 15:00:44,536 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.5 pTM=0.336 ipTM=0.153 tol=6.27
2024-07-08 15:01:05,939 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.6 pTM=0.339 ipTM=0.153 tol=6.73
2024-07-08 15:01:27,339 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.6 pTM=0.337 ipTM=0.149 tol=5.24
2024-07-08 15:01:48,732 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.2 pTM=0.337 ipTM=0.151 tol=5.67
2024-07-08 15:02:10,106 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.7 pTM=0.338 ipTM=0.151 tol=3.6
2024-07-08 15:02:31,474 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.9 pTM=0.336 ipTM=0.149 tol=4.3
2024-07-08 15:02:31,475 alphafold2_multimer_v3_model_3_seed_000 took 662.9s (30 recycles)
2024-07-08 15:02:53,336 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.4 pTM=0.331 ipTM=0.159
2024-07-08 15:03:14,622 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61 pTM=0.329 ipTM=0.162 tol=7.31
2024-07-08 15:03:35,937 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.2 pTM=0.328 ipTM=0.164 tol=4.06
2024-07-08 15:03:57,268 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.1 pTM=0.33 ipTM=0.162 tol=4.16
2024-07-08 15:04:18,601 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.6 pTM=0.333 ipTM=0.162 tol=3.18
2024-07-08 15:04:39,933 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61.1 pTM=0.332 ipTM=0.169 tol=2.93
2024-07-08 15:05:01,282 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.6 pTM=0.33 ipTM=0.164 tol=3.88
2024-07-08 15:05:22,620 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.9 pTM=0.333 ipTM=0.167 tol=4.15
2024-07-08 15:05:43,969 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.2 pTM=0.332 ipTM=0.163 tol=3.11
2024-07-08 15:06:05,332 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.2 pTM=0.338 ipTM=0.169 tol=2.93
2024-07-08 15:06:26,689 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.6 pTM=0.334 ipTM=0.163 tol=2.18
2024-07-08 15:06:48,043 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.3 pTM=0.338 ipTM=0.172 tol=4.05
2024-07-08 15:07:09,390 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.7 pTM=0.337 ipTM=0.17 tol=3.38
2024-07-08 15:07:30,723 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.2 pTM=0.338 ipTM=0.175 tol=5.27
2024-07-08 15:07:52,060 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.5 pTM=0.342 ipTM=0.176 tol=4.37
2024-07-08 15:08:13,377 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.2 pTM=0.349 ipTM=0.203 tol=5.59
2024-07-08 15:08:34,716 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.5 pTM=0.338 ipTM=0.169 tol=4.31
2024-07-08 15:08:56,061 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.1 pTM=0.34 ipTM=0.172 tol=3.04
2024-07-08 15:09:17,399 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.5 pTM=0.343 ipTM=0.174 tol=2.86
2024-07-08 15:09:38,737 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.1 pTM=0.342 ipTM=0.175 tol=2.51
2024-07-08 15:10:00,072 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.2 pTM=0.338 ipTM=0.174 tol=4
2024-07-08 15:10:21,408 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.3 pTM=0.344 ipTM=0.18 tol=3.45
2024-07-08 15:10:42,731 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.6 pTM=0.342 ipTM=0.178 tol=2.52
2024-07-08 15:11:04,051 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.7 pTM=0.341 ipTM=0.177 tol=2.42
2024-07-08 15:11:25,377 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.2 pTM=0.339 ipTM=0.176 tol=2.24
2024-07-08 15:11:46,716 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61 pTM=0.341 ipTM=0.177 tol=2.2
2024-07-08 15:12:08,050 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.4 pTM=0.34 ipTM=0.172 tol=2.61
2024-07-08 15:12:29,381 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.1 pTM=0.341 ipTM=0.174 tol=2.6
2024-07-08 15:12:50,694 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.3 pTM=0.34 ipTM=0.176 tol=1.94
2024-07-08 15:13:12,008 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.6 pTM=0.337 ipTM=0.171 tol=3.15
2024-07-08 15:13:33,318 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61 pTM=0.338 ipTM=0.173 tol=3.21
2024-07-08 15:13:33,319 alphafold2_multimer_v3_model_4_seed_000 took 661.3s (30 recycles)
2024-07-08 15:13:55,196 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.3 pTM=0.344 ipTM=0.166
2024-07-08 15:14:16,521 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.9 pTM=0.338 ipTM=0.156 tol=9.3
2024-07-08 15:14:37,868 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.7 pTM=0.342 ipTM=0.164 tol=14.7
2024-07-08 15:14:59,221 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.7 pTM=0.339 ipTM=0.165 tol=4.19
2024-07-08 15:15:20,543 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.5 pTM=0.398 ipTM=0.306 tol=4.83
2024-07-08 15:15:41,871 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62 pTM=0.343 ipTM=0.181 tol=4.59
2024-07-08 15:16:03,210 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.9 pTM=0.346 ipTM=0.183 tol=4.7
2024-07-08 15:16:24,526 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.5 pTM=0.365 ipTM=0.232 tol=3.54
2024-07-08 15:16:45,855 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.343 ipTM=0.174 tol=3.68
2024-07-08 15:17:07,193 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.1 pTM=0.343 ipTM=0.167 tol=3.4
2024-07-08 15:17:28,497 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.8 pTM=0.393 ipTM=0.284 tol=4.69
2024-07-08 15:17:49,803 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.2 pTM=0.346 ipTM=0.185 tol=6.16
2024-07-08 15:18:11,120 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.1 pTM=0.35 ipTM=0.19 tol=3.17
2024-07-08 15:18:32,415 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.9 pTM=0.365 ipTM=0.225 tol=4.51
2024-07-08 15:18:53,728 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.9 pTM=0.353 ipTM=0.192 tol=2.18
2024-07-08 15:19:15,044 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.9 pTM=0.354 ipTM=0.2 tol=1.91
2024-07-08 15:19:36,359 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.3 pTM=0.353 ipTM=0.196 tol=4.34
2024-07-08 15:19:57,672 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.2 pTM=0.364 ipTM=0.218 tol=3.54
2024-07-08 15:20:18,994 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.3 pTM=0.349 ipTM=0.184 tol=2.08
2024-07-08 15:20:40,319 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.9 pTM=0.353 ipTM=0.192 tol=2.29
2024-07-08 15:21:01,651 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.2 pTM=0.352 ipTM=0.194 tol=2.32
2024-07-08 15:21:22,973 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.3 pTM=0.368 ipTM=0.234 tol=1.37
2024-07-08 15:21:44,307 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.3 pTM=0.346 ipTM=0.185 tol=4.73
2024-07-08 15:22:05,630 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.4 pTM=0.367 ipTM=0.218 tol=6.41
2024-07-08 15:22:26,968 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.4 pTM=0.352 ipTM=0.189 tol=3.52
2024-07-08 15:22:48,306 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.1 pTM=0.357 ipTM=0.208 tol=3.05
2024-07-08 15:23:09,664 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.6 pTM=0.351 ipTM=0.188 tol=2.97
2024-07-08 15:23:31,013 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.3 pTM=0.355 ipTM=0.201 tol=2.63
2024-07-08 15:23:52,354 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.7 pTM=0.35 ipTM=0.19 tol=1.92
2024-07-08 15:24:13,686 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.5 pTM=0.354 ipTM=0.2 tol=1.9
2024-07-08 15:24:35,021 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.7 pTM=0.351 ipTM=0.193 tol=1.89
2024-07-08 15:24:35,022 alphafold2_multimer_v3_model_5_seed_000 took 661.1s (30 recycles)
2024-07-08 15:24:35,598 reranking models by 'multimer' metric
2024-07-08 15:24:39,283 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 15:25:40,964 Relaxation took 65.4s
2024-07-08 15:25:40,965 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.7 pTM=0.351 ipTM=0.193
2024-07-08 15:26:58,623 Relaxation took 77.7s
2024-07-08 15:26:58,623 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61 pTM=0.338 ipTM=0.173
2024-07-08 15:28:13,315 Relaxation took 74.7s
2024-07-08 15:28:13,315 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.4 pTM=0.334 ipTM=0.162
2024-07-08 15:29:30,964 Relaxation took 77.6s
2024-07-08 15:29:30,964 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.6 pTM=0.316 ipTM=0.161
2024-07-08 15:30:55,852 Relaxation took 84.9s
2024-07-08 15:30:55,853 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.9 pTM=0.336 ipTM=0.149
2024-07-08 15:30:57,580 Done