2024-07-08 15:06:03,232 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 15:06:03,701 Running on GPU
2024-07-08 15:06:08,081 Found 6 citations for tools or databases
2024-07-08 15:06:08,081 Query 1/1: APOA2_TIAF1 (length 215)
2024-07-08 15:06:08,592 Sleeping for 5s. Reason: PENDING
2024-07-08 15:06:13,996 Sleeping for 9s. Reason: RUNNING
2024-07-08 15:06:23,417 Sleeping for 6s. Reason: RUNNING
2024-07-08 15:06:29,890 Sleeping for 8s. Reason: RUNNING
2024-07-08 15:06:38,327 Sleeping for 7s. Reason: RUNNING
2024-07-08 15:06:46,720 Sleeping for 7s. Reason: PENDING
2024-07-08 15:06:54,143 Sleeping for 7s. Reason: RUNNING
2024-07-08 15:07:02,430 Setting max_seq=508, max_extra_seq=6
2024-07-08 15:09:31,735 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=38 pTM=0.216 ipTM=0.103
2024-07-08 15:09:33,411 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=38.3 pTM=0.223 ipTM=0.108 tol=7.76
2024-07-08 15:09:35,089 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=38.8 pTM=0.218 ipTM=0.0996 tol=9.51
2024-07-08 15:09:36,765 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=38.9 pTM=0.223 ipTM=0.102 tol=5
2024-07-08 15:09:38,441 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=38.6 pTM=0.217 ipTM=0.0982 tol=2.37
2024-07-08 15:09:40,116 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=38.9 pTM=0.221 ipTM=0.102 tol=2.72
2024-07-08 15:09:41,793 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=39.4 pTM=0.225 ipTM=0.103 tol=2.56
2024-07-08 15:09:43,470 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=39.2 pTM=0.223 ipTM=0.102 tol=1.53
2024-07-08 15:09:45,148 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=39.2 pTM=0.223 ipTM=0.104 tol=1.51
2024-07-08 15:09:46,824 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=39 pTM=0.22 ipTM=0.104 tol=1.65
2024-07-08 15:09:48,503 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=39.1 pTM=0.222 ipTM=0.105 tol=1.42
2024-07-08 15:09:50,181 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=39.5 pTM=0.222 ipTM=0.106 tol=1.32
2024-07-08 15:09:51,859 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=39.6 pTM=0.222 ipTM=0.107 tol=1.38
2024-07-08 15:09:53,535 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=39.4 pTM=0.221 ipTM=0.104 tol=1.29
2024-07-08 15:09:55,212 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=39.3 pTM=0.222 ipTM=0.106 tol=1.6
2024-07-08 15:09:56,886 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=38.9 pTM=0.221 ipTM=0.106 tol=1.51
2024-07-08 15:09:58,563 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=39.1 pTM=0.223 ipTM=0.107 tol=1.01
2024-07-08 15:10:00,239 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=39.2 pTM=0.223 ipTM=0.107 tol=1.31
2024-07-08 15:10:01,916 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=39.1 pTM=0.222 ipTM=0.105 tol=1.39
2024-07-08 15:10:03,592 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=38.9 pTM=0.218 ipTM=0.102 tol=2.39
2024-07-08 15:10:05,271 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=38.8 pTM=0.223 ipTM=0.105 tol=1.99
2024-07-08 15:10:06,948 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=38.8 pTM=0.219 ipTM=0.103 tol=1.59
2024-07-08 15:10:08,625 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=38.7 pTM=0.219 ipTM=0.105 tol=1.51
2024-07-08 15:10:10,301 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=39.1 pTM=0.22 ipTM=0.105 tol=1.16
2024-07-08 15:10:11,980 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=39.3 pTM=0.223 ipTM=0.105 tol=1.45
2024-07-08 15:10:13,657 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=38.7 pTM=0.221 ipTM=0.105 tol=2.47
2024-07-08 15:10:15,335 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=38.5 pTM=0.22 ipTM=0.105 tol=1.88
2024-07-08 15:10:17,012 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=38.5 pTM=0.224 ipTM=0.105 tol=1.45
2024-07-08 15:10:18,691 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=38.9 pTM=0.221 ipTM=0.104 tol=1.09
2024-07-08 15:10:20,369 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=38.7 pTM=0.223 ipTM=0.105 tol=1.63
2024-07-08 15:10:22,047 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=38.8 pTM=0.22 ipTM=0.103 tol=1.06
2024-07-08 15:10:22,047 alphafold2_multimer_v3_model_1_seed_000 took 194.5s (30 recycles)
2024-07-08 15:10:23,776 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=32.5 pTM=0.199 ipTM=0.0963
2024-07-08 15:10:25,454 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=35.3 pTM=0.219 ipTM=0.105 tol=9.05
2024-07-08 15:10:27,131 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=35.8 pTM=0.217 ipTM=0.103 tol=3.2
2024-07-08 15:10:28,809 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=36.1 pTM=0.22 ipTM=0.103 tol=3.02
2024-07-08 15:10:30,488 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=35.8 pTM=0.219 ipTM=0.102 tol=2.63
2024-07-08 15:10:32,166 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=36.7 pTM=0.221 ipTM=0.105 tol=2.66
2024-07-08 15:10:33,845 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=36.6 pTM=0.223 ipTM=0.104 tol=2.14
2024-07-08 15:10:35,523 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=37 pTM=0.226 ipTM=0.106 tol=1.77
2024-07-08 15:10:37,202 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=37 pTM=0.224 ipTM=0.105 tol=2.04
2024-07-08 15:10:38,881 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=37 pTM=0.222 ipTM=0.105 tol=1.38
2024-07-08 15:10:40,561 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=36.7 pTM=0.219 ipTM=0.103 tol=2.86
2024-07-08 15:10:42,239 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=37 pTM=0.219 ipTM=0.104 tol=2.47
2024-07-08 15:10:43,919 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=37.3 pTM=0.219 ipTM=0.106 tol=1.23
2024-07-08 15:10:45,595 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=37.2 pTM=0.22 ipTM=0.105 tol=1.62
2024-07-08 15:10:47,273 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=37.2 pTM=0.224 ipTM=0.107 tol=0.838
2024-07-08 15:10:48,951 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=37.3 pTM=0.224 ipTM=0.107 tol=1.16
2024-07-08 15:10:50,628 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=37.5 pTM=0.226 ipTM=0.109 tol=0.867
2024-07-08 15:10:52,304 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=37.3 pTM=0.224 ipTM=0.106 tol=2.16
2024-07-08 15:10:53,984 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=37.5 pTM=0.224 ipTM=0.107 tol=2.06
2024-07-08 15:10:55,662 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=37.2 pTM=0.222 ipTM=0.104 tol=1.3
2024-07-08 15:10:57,341 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=37.1 pTM=0.224 ipTM=0.107 tol=1.01
2024-07-08 15:10:59,019 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=37.1 pTM=0.222 ipTM=0.105 tol=1.38
2024-07-08 15:11:00,696 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=37.2 pTM=0.218 ipTM=0.107 tol=2.29
2024-07-08 15:11:02,375 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=37 pTM=0.221 ipTM=0.105 tol=1.4
2024-07-08 15:11:04,053 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=37.6 pTM=0.225 ipTM=0.106 tol=1.77
2024-07-08 15:11:05,730 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=36.8 pTM=0.222 ipTM=0.107 tol=2.61
2024-07-08 15:11:07,409 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=36.9 pTM=0.222 ipTM=0.108 tol=1.47
2024-07-08 15:11:09,087 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=37 pTM=0.225 ipTM=0.11 tol=1.91
2024-07-08 15:11:10,767 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=37.3 pTM=0.225 ipTM=0.108 tol=1.24
2024-07-08 15:11:12,444 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=37.1 pTM=0.225 ipTM=0.11 tol=1.94
2024-07-08 15:11:14,124 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=37.2 pTM=0.223 ipTM=0.108 tol=1.99
2024-07-08 15:11:14,125 alphafold2_multimer_v3_model_2_seed_000 took 52.0s (30 recycles)
2024-07-08 15:11:15,846 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42.8 pTM=0.218 ipTM=0.107
2024-07-08 15:11:17,522 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=40.6 pTM=0.206 ipTM=0.101 tol=7.15
2024-07-08 15:11:19,199 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=37.9 pTM=0.207 ipTM=0.103 tol=5.03
2024-07-08 15:11:20,873 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=39.4 pTM=0.212 ipTM=0.108 tol=3.57
2024-07-08 15:11:22,551 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=38.5 pTM=0.21 ipTM=0.108 tol=1.81
2024-07-08 15:11:24,226 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=38.2 pTM=0.209 ipTM=0.107 tol=2.98
2024-07-08 15:11:25,903 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=38.1 pTM=0.21 ipTM=0.106 tol=2.63
2024-07-08 15:11:27,578 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=37.6 pTM=0.21 ipTM=0.104 tol=2.28
2024-07-08 15:11:29,255 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=37.2 pTM=0.209 ipTM=0.0984 tol=3.02
2024-07-08 15:11:30,931 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=38.2 pTM=0.213 ipTM=0.106 tol=2.13
2024-07-08 15:11:32,607 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=37.3 pTM=0.21 ipTM=0.101 tol=2.05
2024-07-08 15:11:34,281 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=37.4 pTM=0.208 ipTM=0.101 tol=3.84
2024-07-08 15:11:35,957 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=37.9 pTM=0.209 ipTM=0.102 tol=3.29
2024-07-08 15:11:37,632 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=37.3 pTM=0.21 ipTM=0.103 tol=4.27
2024-07-08 15:11:39,308 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=38 pTM=0.212 ipTM=0.104 tol=3.17
2024-07-08 15:11:40,982 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=37.5 pTM=0.209 ipTM=0.1 tol=1.68
2024-07-08 15:11:42,659 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=38 pTM=0.211 ipTM=0.104 tol=2.81
2024-07-08 15:11:44,332 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=37.8 pTM=0.21 ipTM=0.102 tol=1.44
2024-07-08 15:11:46,008 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=38.2 pTM=0.213 ipTM=0.107 tol=1.35
2024-07-08 15:11:47,683 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=37.5 pTM=0.212 ipTM=0.0983 tol=3.29
2024-07-08 15:11:49,358 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=38.5 pTM=0.217 ipTM=0.103 tol=2.27
2024-07-08 15:11:51,032 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=38.2 pTM=0.21 ipTM=0.105 tol=1.89
2024-07-08 15:11:52,708 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=37.7 pTM=0.209 ipTM=0.104 tol=1.82
2024-07-08 15:11:54,383 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=37.7 pTM=0.208 ipTM=0.102 tol=1.34
2024-07-08 15:11:56,060 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=37.6 pTM=0.207 ipTM=0.0989 tol=0.911
2024-07-08 15:11:57,734 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=37.7 pTM=0.209 ipTM=0.104 tol=1.51
2024-07-08 15:11:59,409 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=37.3 pTM=0.212 ipTM=0.101 tol=3.52
2024-07-08 15:12:01,084 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=37.6 pTM=0.211 ipTM=0.1 tol=2.11
2024-07-08 15:12:02,759 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=37.5 pTM=0.209 ipTM=0.101 tol=2.29
2024-07-08 15:12:04,433 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=37.2 pTM=0.209 ipTM=0.0996 tol=1.33
2024-07-08 15:12:06,109 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=38.1 pTM=0.21 ipTM=0.102 tol=2.2
2024-07-08 15:12:06,110 alphafold2_multimer_v3_model_3_seed_000 took 51.9s (30 recycles)
2024-07-08 15:12:07,830 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=35.3 pTM=0.19 ipTM=0.0967
2024-07-08 15:12:09,507 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=35.2 pTM=0.195 ipTM=0.1 tol=8.92
2024-07-08 15:12:11,185 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=36.4 pTM=0.199 ipTM=0.106 tol=9.8
2024-07-08 15:12:12,864 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=37.9 pTM=0.201 ipTM=0.105 tol=6.87
2024-07-08 15:12:14,545 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=38.5 pTM=0.198 ipTM=0.103 tol=2.41
2024-07-08 15:12:16,224 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=38.6 pTM=0.199 ipTM=0.108 tol=1.95
2024-07-08 15:12:17,905 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=38.9 pTM=0.199 ipTM=0.106 tol=1.38
2024-07-08 15:12:19,582 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=38.9 pTM=0.201 ipTM=0.108 tol=1.29
2024-07-08 15:12:21,262 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=39.1 pTM=0.202 ipTM=0.105 tol=1.41
2024-07-08 15:12:22,940 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=39 pTM=0.2 ipTM=0.106 tol=1.33
2024-07-08 15:12:24,619 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=39 pTM=0.2 ipTM=0.105 tol=1.06
2024-07-08 15:12:26,298 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=39.2 pTM=0.201 ipTM=0.106 tol=0.825
2024-07-08 15:12:27,977 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=39.1 pTM=0.203 ipTM=0.105 tol=1.22
2024-07-08 15:12:29,654 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=38.6 pTM=0.202 ipTM=0.106 tol=1.22
2024-07-08 15:12:31,334 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=39.1 pTM=0.201 ipTM=0.105 tol=1.45
2024-07-08 15:12:33,011 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=38.8 pTM=0.202 ipTM=0.104 tol=0.974
2024-07-08 15:12:34,690 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=38.5 pTM=0.2 ipTM=0.104 tol=1.6
2024-07-08 15:12:36,368 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=39.1 pTM=0.201 ipTM=0.104 tol=1.73
2024-07-08 15:12:38,048 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=39.1 pTM=0.202 ipTM=0.104 tol=1.82
2024-07-08 15:12:39,727 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=39 pTM=0.202 ipTM=0.102 tol=0.972
2024-07-08 15:12:41,405 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=39 pTM=0.203 ipTM=0.103 tol=1.03
2024-07-08 15:12:43,083 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=38.9 pTM=0.2 ipTM=0.104 tol=0.79
2024-07-08 15:12:44,762 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=38.9 pTM=0.203 ipTM=0.103 tol=1.16
2024-07-08 15:12:46,439 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=39.3 pTM=0.203 ipTM=0.105 tol=1.43
2024-07-08 15:12:48,119 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=39.5 pTM=0.203 ipTM=0.103 tol=0.904
2024-07-08 15:12:49,796 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=38.6 pTM=0.203 ipTM=0.104 tol=1.59
2024-07-08 15:12:51,475 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=38.7 pTM=0.201 ipTM=0.109 tol=1.66
2024-07-08 15:12:53,154 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=39 pTM=0.205 ipTM=0.105 tol=1.35
2024-07-08 15:12:54,834 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.2 pTM=0.204 ipTM=0.11 tol=1.29
2024-07-08 15:12:56,510 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=38.9 pTM=0.202 ipTM=0.114 tol=1.23
2024-07-08 15:12:58,191 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=39 pTM=0.204 ipTM=0.114 tol=1
2024-07-08 15:12:58,191 alphafold2_multimer_v3_model_4_seed_000 took 52.0s (30 recycles)
2024-07-08 15:12:59,910 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=34 pTM=0.19 ipTM=0.103
2024-07-08 15:13:01,585 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=33.1 pTM=0.185 ipTM=0.104 tol=7.54
2024-07-08 15:13:03,261 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=34 pTM=0.184 ipTM=0.098 tol=9.6
2024-07-08 15:13:04,937 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=35.3 pTM=0.188 ipTM=0.0962 tol=5.02
2024-07-08 15:13:06,614 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=34.8 pTM=0.184 ipTM=0.0978 tol=3.9
2024-07-08 15:13:08,289 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=34.5 pTM=0.185 ipTM=0.097 tol=1.96
2024-07-08 15:13:09,966 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=34.4 pTM=0.184 ipTM=0.0953 tol=2.07
2024-07-08 15:13:11,643 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=34.9 pTM=0.186 ipTM=0.095 tol=1.98
2024-07-08 15:13:13,320 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=34.8 pTM=0.186 ipTM=0.0906 tol=1.79
2024-07-08 15:13:14,995 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=34.7 pTM=0.183 ipTM=0.0945 tol=1.97
2024-07-08 15:13:16,672 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=35 pTM=0.183 ipTM=0.0925 tol=2.02
2024-07-08 15:13:18,347 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=35.1 pTM=0.185 ipTM=0.0941 tol=2.31
2024-07-08 15:13:20,024 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=34.6 pTM=0.186 ipTM=0.0927 tol=1.96
2024-07-08 15:13:21,701 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=34.8 pTM=0.185 ipTM=0.093 tol=1.54
2024-07-08 15:13:23,379 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=35.3 pTM=0.185 ipTM=0.0908 tol=1.93
2024-07-08 15:13:25,055 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=34.6 pTM=0.184 ipTM=0.0916 tol=1.19
2024-07-08 15:13:26,732 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=34.8 pTM=0.183 ipTM=0.0947 tol=1.88
2024-07-08 15:13:28,408 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=35.3 pTM=0.184 ipTM=0.0927 tol=1.9
2024-07-08 15:13:30,084 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=35 pTM=0.182 ipTM=0.0945 tol=2.79
2024-07-08 15:13:31,759 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=35.1 pTM=0.182 ipTM=0.0931 tol=2.34
2024-07-08 15:13:33,437 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=34.9 pTM=0.185 ipTM=0.0957 tol=1.17
2024-07-08 15:13:35,111 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=34.8 pTM=0.183 ipTM=0.096 tol=1.31
2024-07-08 15:13:36,788 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=34.4 pTM=0.184 ipTM=0.0933 tol=1.41
2024-07-08 15:13:38,464 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=35.3 pTM=0.183 ipTM=0.0933 tol=2.29
2024-07-08 15:13:40,142 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=34.8 pTM=0.183 ipTM=0.0934 tol=1.35
2024-07-08 15:13:41,819 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=34.8 pTM=0.184 ipTM=0.0936 tol=1.51
2024-07-08 15:13:43,496 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=34.7 pTM=0.183 ipTM=0.093 tol=1.56
2024-07-08 15:13:45,172 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=35 pTM=0.184 ipTM=0.094 tol=2.06
2024-07-08 15:13:46,851 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=34.6 pTM=0.181 ipTM=0.0936 tol=2.01
2024-07-08 15:13:48,528 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=34.3 pTM=0.182 ipTM=0.0927 tol=1.28
2024-07-08 15:13:50,205 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=34.6 pTM=0.182 ipTM=0.0965 tol=1.94
2024-07-08 15:13:50,205 alphafold2_multimer_v3_model_5_seed_000 took 52.0s (30 recycles)
2024-07-08 15:13:50,246 reranking models by 'multimer' metric
2024-07-08 15:13:52,882 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 15:14:00,548 Relaxation took 10.3s
2024-07-08 15:14:00,548 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=39 pTM=0.204 ipTM=0.114
2024-07-08 15:14:04,587 Relaxation took 4.0s
2024-07-08 15:14:04,587 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=37.2 pTM=0.223 ipTM=0.108
2024-07-08 15:14:08,186 Relaxation took 3.6s
2024-07-08 15:14:08,186 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=38.8 pTM=0.22 ipTM=0.103
2024-07-08 15:14:16,197 Relaxation took 8.0s
2024-07-08 15:14:16,197 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=38.1 pTM=0.21 ipTM=0.102
2024-07-08 15:14:22,244 Relaxation took 6.0s
2024-07-08 15:14:22,245 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=34.6 pTM=0.182 ipTM=0.0965
2024-07-08 15:14:23,049 Done