2024-07-08 15:14:59,517 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 15:14:59,830 Running on GPU
2024-07-08 15:15:03,662 Found 6 citations for tools or databases
2024-07-08 15:15:03,662 Query 1/1: APOE_DNPEP (length 802)
2024-07-08 15:15:04,104 Sleeping for 8s. Reason: PENDING
2024-07-08 15:15:12,509 Sleeping for 6s. Reason: RUNNING
2024-07-08 15:15:18,942 Sleeping for 9s. Reason: RUNNING
2024-07-08 15:15:28,372 Sleeping for 6s. Reason: RUNNING
2024-07-08 15:15:34,800 Sleeping for 8s. Reason: RUNNING
2024-07-08 15:15:43,985 Sleeping for 9s. Reason: RUNNING
2024-07-08 15:15:53,413 Sleeping for 9s. Reason: RUNNING
2024-07-08 15:16:02,833 Sleeping for 10s. Reason: RUNNING
2024-07-08 15:16:15,662 Sleeping for 6s. Reason: PENDING
2024-07-08 15:16:22,076 Sleeping for 5s. Reason: RUNNING
2024-07-08 15:16:27,508 Sleeping for 8s. Reason: RUNNING
2024-07-08 15:16:35,926 Sleeping for 5s. Reason: RUNNING
2024-07-08 15:16:41,344 Sleeping for 10s. Reason: RUNNING
2024-07-08 15:16:54,470 Setting max_seq=508, max_extra_seq=2048
2024-07-08 15:19:33,317 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.5 pTM=0.609 ipTM=0.141
2024-07-08 15:19:46,577 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.1 pTM=0.615 ipTM=0.134 tol=16.2
2024-07-08 15:19:59,850 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.4 pTM=0.618 ipTM=0.139 tol=4.44
2024-07-08 15:20:13,143 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.4 pTM=0.616 ipTM=0.134 tol=3.71
2024-07-08 15:20:26,462 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.1 pTM=0.614 ipTM=0.131 tol=3.29
2024-07-08 15:20:39,811 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.6 pTM=0.615 ipTM=0.131 tol=3.92
2024-07-08 15:20:53,145 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.6 pTM=0.614 ipTM=0.129 tol=2.68
2024-07-08 15:21:06,539 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.2 pTM=0.616 ipTM=0.132 tol=3.04
2024-07-08 15:21:19,910 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.4 pTM=0.615 ipTM=0.132 tol=2.81
2024-07-08 15:21:33,281 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.1 pTM=0.615 ipTM=0.132 tol=2.63
2024-07-08 15:21:46,663 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.9 pTM=0.615 ipTM=0.132 tol=2.27
2024-07-08 15:22:00,055 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.9 pTM=0.615 ipTM=0.134 tol=3.94
2024-07-08 15:22:13,447 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.7 pTM=0.615 ipTM=0.131 tol=3.1
2024-07-08 15:22:26,860 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.1 pTM=0.614 ipTM=0.129 tol=3.58
2024-07-08 15:22:40,296 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.4 pTM=0.613 ipTM=0.126 tol=3.05
2024-07-08 15:22:53,712 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.1 pTM=0.614 ipTM=0.128 tol=3.3
2024-07-08 15:23:07,131 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.1 pTM=0.613 ipTM=0.127 tol=5.36
2024-07-08 15:23:20,538 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.7 pTM=0.615 ipTM=0.131 tol=4.24
2024-07-08 15:23:33,944 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.6 pTM=0.613 ipTM=0.129 tol=2.85
2024-07-08 15:23:47,380 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.9 pTM=0.613 ipTM=0.127 tol=3.34
2024-07-08 15:24:00,800 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.9 pTM=0.613 ipTM=0.128 tol=1.91
2024-07-08 15:24:14,227 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.2 pTM=0.615 ipTM=0.131 tol=5.07
2024-07-08 15:24:27,661 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72 pTM=0.613 ipTM=0.125 tol=2.53
2024-07-08 15:24:41,093 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.6 pTM=0.614 ipTM=0.129 tol=1.83
2024-07-08 15:24:54,518 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.4 pTM=0.613 ipTM=0.126 tol=3.25
2024-07-08 15:25:07,962 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.8 pTM=0.614 ipTM=0.13 tol=2.64
2024-07-08 15:25:21,390 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.9 pTM=0.614 ipTM=0.13 tol=3.94
2024-07-08 15:25:34,820 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.8 pTM=0.613 ipTM=0.127 tol=3.08
2024-07-08 15:25:48,254 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.4 pTM=0.614 ipTM=0.129 tol=2.71
2024-07-08 15:26:01,686 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72 pTM=0.612 ipTM=0.126 tol=3.21
2024-07-08 15:26:15,117 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72 pTM=0.614 ipTM=0.129 tol=1.73
2024-07-08 15:26:15,118 alphafold2_multimer_v3_model_1_seed_000 took 555.7s (30 recycles)
2024-07-08 15:26:28,868 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.2 pTM=0.612 ipTM=0.151
2024-07-08 15:26:42,236 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.6 pTM=0.618 ipTM=0.145 tol=8.67
2024-07-08 15:26:55,621 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.9 pTM=0.62 ipTM=0.148 tol=5.93
2024-07-08 15:27:09,010 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.4 pTM=0.619 ipTM=0.141 tol=3.78
2024-07-08 15:27:22,414 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.7 pTM=0.619 ipTM=0.143 tol=3.48
2024-07-08 15:27:35,856 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.7 pTM=0.621 ipTM=0.144 tol=3.86
2024-07-08 15:27:49,312 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.8 pTM=0.62 ipTM=0.14 tol=5.91
2024-07-08 15:28:02,758 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.1 pTM=0.621 ipTM=0.143 tol=3.11
2024-07-08 15:28:16,224 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.7 pTM=0.621 ipTM=0.143 tol=3.54
2024-07-08 15:28:29,671 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.5 pTM=0.62 ipTM=0.14 tol=11.4
2024-07-08 15:28:43,127 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.4 pTM=0.62 ipTM=0.141 tol=6.18
2024-07-08 15:28:56,601 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.8 pTM=0.621 ipTM=0.143 tol=7.02
2024-07-08 15:29:10,052 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.3 pTM=0.621 ipTM=0.143 tol=4.68
2024-07-08 15:29:23,509 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.6 pTM=0.621 ipTM=0.145 tol=7.28
2024-07-08 15:29:36,964 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.3 pTM=0.619 ipTM=0.137 tol=7.64
2024-07-08 15:29:50,424 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.7 pTM=0.618 ipTM=0.135 tol=7.44
2024-07-08 15:30:03,896 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.8 pTM=0.621 ipTM=0.144 tol=8.22
2024-07-08 15:30:17,327 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.2 pTM=0.622 ipTM=0.147 tol=5.77
2024-07-08 15:30:30,748 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.6 pTM=0.622 ipTM=0.147 tol=3.09
2024-07-08 15:30:44,222 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.1 pTM=0.623 ipTM=0.15 tol=3.32
2024-07-08 15:30:57,682 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.1 pTM=0.619 ipTM=0.14 tol=2.29
2024-07-08 15:31:11,148 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73 pTM=0.62 ipTM=0.141 tol=3.34
2024-07-08 15:31:24,602 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.2 pTM=0.621 ipTM=0.146 tol=2.16
2024-07-08 15:31:38,080 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=70.3 pTM=0.619 ipTM=0.139 tol=3.27
2024-07-08 15:31:51,544 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.2 pTM=0.621 ipTM=0.144 tol=3.25
2024-07-08 15:32:04,994 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.9 pTM=0.622 ipTM=0.147 tol=2.16
2024-07-08 15:32:18,452 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.2 pTM=0.619 ipTM=0.138 tol=10.5
2024-07-08 15:32:31,906 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.9 pTM=0.618 ipTM=0.139 tol=7.56
2024-07-08 15:32:45,360 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.3 pTM=0.621 ipTM=0.145 tol=7.64
2024-07-08 15:32:58,812 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.4 pTM=0.622 ipTM=0.148 tol=2.66
2024-07-08 15:33:12,284 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.1 pTM=0.619 ipTM=0.136 tol=2.65
2024-07-08 15:33:12,285 alphafold2_multimer_v3_model_2_seed_000 took 416.8s (30 recycles)
2024-07-08 15:33:26,047 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.9 pTM=0.602 ipTM=0.127
2024-07-08 15:33:39,371 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.2 pTM=0.607 ipTM=0.139 tol=12.5
2024-07-08 15:33:52,711 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.1 pTM=0.604 ipTM=0.132 tol=9.7
2024-07-08 15:34:06,022 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68 pTM=0.607 ipTM=0.139 tol=4.45
2024-07-08 15:34:19,320 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.8 pTM=0.608 ipTM=0.146 tol=3.7
2024-07-08 15:34:32,654 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.8 pTM=0.606 ipTM=0.137 tol=4.7
2024-07-08 15:34:45,974 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.6 pTM=0.607 ipTM=0.139 tol=3.05
2024-07-08 15:34:59,301 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.9 pTM=0.608 ipTM=0.139 tol=3.45
2024-07-08 15:35:12,644 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.9 pTM=0.605 ipTM=0.135 tol=4.3
2024-07-08 15:35:25,978 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68 pTM=0.605 ipTM=0.137 tol=3.79
2024-07-08 15:35:39,339 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.8 pTM=0.607 ipTM=0.139 tol=6.46
2024-07-08 15:35:52,677 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.8 pTM=0.607 ipTM=0.138 tol=2.76
2024-07-08 15:36:06,022 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69 pTM=0.606 ipTM=0.137 tol=3.86
2024-07-08 15:36:19,341 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68 pTM=0.607 ipTM=0.138 tol=3.03
2024-07-08 15:36:32,641 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.6 pTM=0.607 ipTM=0.141 tol=3.71
2024-07-08 15:36:45,959 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.1 pTM=0.607 ipTM=0.136 tol=3.88
2024-07-08 15:36:59,255 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.9 pTM=0.607 ipTM=0.141 tol=3.73
2024-07-08 15:37:12,547 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.4 pTM=0.605 ipTM=0.136 tol=3.62
2024-07-08 15:37:25,815 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.6 pTM=0.607 ipTM=0.14 tol=0.754
2024-07-08 15:37:39,117 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.6 pTM=0.606 ipTM=0.135 tol=2.94
2024-07-08 15:37:52,424 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.7 pTM=0.606 ipTM=0.138 tol=3.14
2024-07-08 15:38:05,722 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.4 pTM=0.606 ipTM=0.137 tol=2.01
2024-07-08 15:38:19,035 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.6 pTM=0.607 ipTM=0.139 tol=2.93
2024-07-08 15:38:32,365 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.5 pTM=0.606 ipTM=0.136 tol=3.18
2024-07-08 15:38:45,680 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.6 pTM=0.606 ipTM=0.138 tol=1.72
2024-07-08 15:38:58,981 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.5 pTM=0.607 ipTM=0.141 tol=3.27
2024-07-08 15:39:12,297 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.8 pTM=0.606 ipTM=0.138 tol=3.37
2024-07-08 15:39:25,617 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68 pTM=0.607 ipTM=0.137 tol=1.69
2024-07-08 15:39:38,927 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.7 pTM=0.607 ipTM=0.138 tol=3.05
2024-07-08 15:39:52,240 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68.5 pTM=0.605 ipTM=0.136 tol=3.2
2024-07-08 15:40:05,564 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.6 pTM=0.606 ipTM=0.137 tol=1.47
2024-07-08 15:40:05,565 alphafold2_multimer_v3_model_3_seed_000 took 412.9s (30 recycles)
2024-07-08 15:40:19,388 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.6 pTM=0.601 ipTM=0.118
2024-07-08 15:40:32,764 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=70.2 pTM=0.626 ipTM=0.172 tol=16.4
2024-07-08 15:40:46,137 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69 pTM=0.614 ipTM=0.136 tol=3.96
2024-07-08 15:40:59,522 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.9 pTM=0.62 ipTM=0.152 tol=6.13
2024-07-08 15:41:12,909 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.7 pTM=0.617 ipTM=0.146 tol=3.83
2024-07-08 15:41:26,311 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.1 pTM=0.618 ipTM=0.143 tol=3.77
2024-07-08 15:41:39,711 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.6 pTM=0.618 ipTM=0.146 tol=4.04
2024-07-08 15:41:53,118 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.2 pTM=0.62 ipTM=0.149 tol=4.08
2024-07-08 15:42:06,510 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.8 pTM=0.62 ipTM=0.15 tol=3.08
2024-07-08 15:42:19,899 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.3 pTM=0.62 ipTM=0.147 tol=4.05
2024-07-08 15:42:33,307 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.2 pTM=0.622 ipTM=0.152 tol=3.6
2024-07-08 15:42:46,704 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.9 pTM=0.621 ipTM=0.15 tol=4.17
2024-07-08 15:43:00,092 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.2 pTM=0.622 ipTM=0.153 tol=4.2
2024-07-08 15:43:13,478 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68 pTM=0.621 ipTM=0.151 tol=3.35
2024-07-08 15:43:26,887 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.4 pTM=0.62 ipTM=0.149 tol=3.12
2024-07-08 15:43:40,281 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.2 pTM=0.622 ipTM=0.151 tol=2.92
2024-07-08 15:43:53,650 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.2 pTM=0.622 ipTM=0.153 tol=3.33
2024-07-08 15:44:07,053 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.2 pTM=0.623 ipTM=0.156 tol=3.85
2024-07-08 15:44:20,446 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.1 pTM=0.622 ipTM=0.153 tol=3.28
2024-07-08 15:44:33,850 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.2 pTM=0.621 ipTM=0.147 tol=3.64
2024-07-08 15:44:47,252 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.8 pTM=0.622 ipTM=0.154 tol=3.79
2024-07-08 15:45:00,645 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.3 pTM=0.622 ipTM=0.152 tol=2.73
2024-07-08 15:45:14,042 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.6 pTM=0.624 ipTM=0.156 tol=3.67
2024-07-08 15:45:27,447 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.3 pTM=0.624 ipTM=0.156 tol=4.05
2024-07-08 15:45:40,855 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.1 pTM=0.625 ipTM=0.159 tol=4.88
2024-07-08 15:45:54,246 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.4 pTM=0.625 ipTM=0.16 tol=4.79
2024-07-08 15:46:07,635 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.4 pTM=0.625 ipTM=0.16 tol=6.74
2024-07-08 15:46:21,030 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.4 pTM=0.625 ipTM=0.161 tol=4.18
2024-07-08 15:46:34,430 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.2 pTM=0.624 ipTM=0.157 tol=3.2
2024-07-08 15:46:47,826 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.7 pTM=0.623 ipTM=0.154 tol=3.54
2024-07-08 15:47:01,198 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.6 pTM=0.623 ipTM=0.155 tol=2.98
2024-07-08 15:47:01,198 alphafold2_multimer_v3_model_4_seed_000 took 415.2s (30 recycles)
2024-07-08 15:47:14,969 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.5 pTM=0.605 ipTM=0.124
2024-07-08 15:47:28,348 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=70.4 pTM=0.612 ipTM=0.134 tol=11.3
2024-07-08 15:47:41,694 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69 pTM=0.611 ipTM=0.13 tol=2.57
2024-07-08 15:47:55,055 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.6 pTM=0.615 ipTM=0.141 tol=4.46
2024-07-08 15:48:08,379 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.2 pTM=0.612 ipTM=0.132 tol=4.48
2024-07-08 15:48:21,752 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.2 pTM=0.611 ipTM=0.13 tol=3.05
2024-07-08 15:48:35,106 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68 pTM=0.614 ipTM=0.142 tol=3.57
2024-07-08 15:48:48,456 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.2 pTM=0.61 ipTM=0.132 tol=7.82
2024-07-08 15:49:01,809 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.9 pTM=0.611 ipTM=0.136 tol=7.36
2024-07-08 15:49:15,158 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.6 pTM=0.611 ipTM=0.138 tol=3.58
2024-07-08 15:49:28,518 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.7 pTM=0.61 ipTM=0.136 tol=4.46
2024-07-08 15:49:41,837 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.3 pTM=0.609 ipTM=0.135 tol=1.72
2024-07-08 15:49:55,150 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.1 pTM=0.611 ipTM=0.14 tol=3.54
2024-07-08 15:50:08,513 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.3 pTM=0.61 ipTM=0.136 tol=3.17
2024-07-08 15:50:21,872 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.4 pTM=0.609 ipTM=0.134 tol=1.34
2024-07-08 15:50:35,203 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.2 pTM=0.611 ipTM=0.137 tol=3.19
2024-07-08 15:50:48,526 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.2 pTM=0.609 ipTM=0.133 tol=2.77
2024-07-08 15:51:01,864 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.2 pTM=0.609 ipTM=0.135 tol=1.04
2024-07-08 15:51:15,208 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.2 pTM=0.611 ipTM=0.14 tol=3.17
2024-07-08 15:51:28,552 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.3 pTM=0.609 ipTM=0.135 tol=2.79
2024-07-08 15:51:41,899 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.5 pTM=0.609 ipTM=0.137 tol=1.75
2024-07-08 15:51:55,239 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.5 pTM=0.609 ipTM=0.135 tol=1.97
2024-07-08 15:52:08,580 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.9 pTM=0.608 ipTM=0.134 tol=1.78
2024-07-08 15:52:21,930 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67 pTM=0.61 ipTM=0.137 tol=3.09
2024-07-08 15:52:35,280 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.9 pTM=0.607 ipTM=0.132 tol=3.23
2024-07-08 15:52:48,624 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.2 pTM=0.61 ipTM=0.137 tol=1.78
2024-07-08 15:53:01,982 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.8 pTM=0.61 ipTM=0.137 tol=3.41
2024-07-08 15:53:15,331 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.4 pTM=0.609 ipTM=0.133 tol=2.59
2024-07-08 15:53:28,659 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.4 pTM=0.609 ipTM=0.134 tol=1.87
2024-07-08 15:53:41,980 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.9 pTM=0.609 ipTM=0.137 tol=3.55
2024-07-08 15:53:55,316 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.6 pTM=0.608 ipTM=0.131 tol=3.25
2024-07-08 15:53:55,317 alphafold2_multimer_v3_model_5_seed_000 took 413.7s (30 recycles)
2024-07-08 15:53:55,722 reranking models by 'multimer' metric
2024-07-08 15:53:58,930 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 15:54:46,405 Relaxation took 50.7s
2024-07-08 15:54:46,406 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.6 pTM=0.623 ipTM=0.155
2024-07-08 15:55:26,100 Relaxation took 39.7s
2024-07-08 15:55:26,100 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.1 pTM=0.619 ipTM=0.136
2024-07-08 15:56:00,989 Relaxation took 34.9s
2024-07-08 15:56:00,989 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.6 pTM=0.606 ipTM=0.137
2024-07-08 15:56:58,532 Relaxation took 57.5s
2024-07-08 15:56:58,532 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.6 pTM=0.608 ipTM=0.131
2024-07-08 15:57:56,701 Relaxation took 58.2s
2024-07-08 15:57:56,701 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72 pTM=0.614 ipTM=0.129
2024-07-08 15:57:58,198 Done