2024-07-08 15:49:18,818 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 15:49:19,130 Running on GPU
2024-07-08 15:49:19,917 Found 6 citations for tools or databases
2024-07-08 15:49:19,917 Query 1/1: ARHG4_NTAQ1 (length 895)
2024-07-08 15:49:20,353 Sleeping for 5s. Reason: PENDING
2024-07-08 15:49:25,773 Sleeping for 6s. Reason: RUNNING
2024-07-08 15:49:33,051 Sleeping for 10s. Reason: RUNNING
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2024-07-08 15:50:00,336 Sleeping for 7s. Reason: RUNNING
2024-07-08 15:50:07,755 Sleeping for 6s. Reason: RUNNING
2024-07-08 15:50:14,169 Sleeping for 7s. Reason: RUNNING
2024-07-08 15:50:22,365 Sleeping for 10s. Reason: RUNNING
2024-07-08 15:50:32,805 Sleeping for 7s. Reason: RUNNING
2024-07-08 15:50:40,228 Sleeping for 7s. Reason: RUNNING
2024-07-08 15:50:47,656 Sleeping for 5s. Reason: RUNNING
2024-07-08 15:50:53,074 Sleeping for 7s. Reason: RUNNING
2024-07-08 15:51:00,500 Sleeping for 6s. Reason: RUNNING
2024-07-08 15:51:06,920 Sleeping for 10s. Reason: RUNNING
2024-07-08 15:51:17,330 Sleeping for 7s. Reason: RUNNING
2024-07-08 15:51:25,273 Sleeping for 6s. Reason: RUNNING
2024-07-08 15:51:35,025 Sleeping for 10s. Reason: PENDING
2024-07-08 15:51:45,447 Sleeping for 6s. Reason: RUNNING
2024-07-08 15:51:51,885 Sleeping for 5s. Reason: RUNNING
2024-07-08 15:51:57,306 Sleeping for 9s. Reason: RUNNING
2024-07-08 15:52:06,720 Sleeping for 7s. Reason: RUNNING
2024-07-08 15:52:14,422 Sleeping for 9s. Reason: RUNNING
2024-07-08 15:52:23,845 Sleeping for 5s. Reason: RUNNING
2024-07-08 15:52:29,251 Sleeping for 8s. Reason: RUNNING
2024-07-08 15:52:37,831 Sleeping for 5s. Reason: RUNNING
2024-07-08 15:52:43,259 Sleeping for 5s. Reason: RUNNING
2024-07-08 15:52:49,171 Sleeping for 7s. Reason: RUNNING
2024-07-08 15:52:56,584 Sleeping for 6s. Reason: RUNNING
2024-07-08 15:53:05,934 Setting max_seq=508, max_extra_seq=2048
2024-07-08 15:55:56,797 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.5 pTM=0.407 ipTM=0.279
2024-07-08 15:56:13,226 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.9 pTM=0.379 ipTM=0.441 tol=10.5
2024-07-08 15:56:29,737 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.2 pTM=0.367 ipTM=0.613 tol=7.9
2024-07-08 15:56:46,260 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.2 pTM=0.388 ipTM=0.601 tol=10.3
2024-07-08 15:57:02,813 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.2 pTM=0.393 ipTM=0.574 tol=5.2
2024-07-08 15:57:19,376 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.6 pTM=0.395 ipTM=0.581 tol=3.78
2024-07-08 15:57:35,962 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.8 pTM=0.399 ipTM=0.622 tol=3.04
2024-07-08 15:57:52,556 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65 pTM=0.411 ipTM=0.616 tol=2.57
2024-07-08 15:58:09,171 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.9 pTM=0.399 ipTM=0.576 tol=6.42
2024-07-08 15:58:25,798 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.1 pTM=0.404 ipTM=0.549 tol=3.89
2024-07-08 15:58:42,446 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.2 pTM=0.412 ipTM=0.591 tol=6.43
2024-07-08 15:58:59,089 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.2 pTM=0.421 ipTM=0.58 tol=5.48
2024-07-08 15:59:15,742 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.1 pTM=0.418 ipTM=0.553 tol=4.01
2024-07-08 15:59:32,399 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.5 pTM=0.421 ipTM=0.613 tol=5.12
2024-07-08 15:59:49,060 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.4 pTM=0.427 ipTM=0.595 tol=4.6
2024-07-08 16:00:05,716 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.4 pTM=0.424 ipTM=0.601 tol=3.44
2024-07-08 16:00:22,371 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.2 pTM=0.422 ipTM=0.619 tol=3.06
2024-07-08 16:00:39,029 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.1 pTM=0.419 ipTM=0.606 tol=4.62
2024-07-08 16:00:55,689 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.2 pTM=0.428 ipTM=0.609 tol=1.41
2024-07-08 16:01:12,351 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.1 pTM=0.423 ipTM=0.586 tol=1.17
2024-07-08 16:01:29,009 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65 pTM=0.426 ipTM=0.572 tol=3.97
2024-07-08 16:01:45,667 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.9 pTM=0.421 ipTM=0.556 tol=3.63
2024-07-08 16:02:02,325 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.7 pTM=0.416 ipTM=0.575 tol=2.18
2024-07-08 16:02:18,977 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.1 pTM=0.422 ipTM=0.588 tol=3.27
2024-07-08 16:02:35,641 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.2 pTM=0.426 ipTM=0.625 tol=1.18
2024-07-08 16:02:52,305 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.1 pTM=0.425 ipTM=0.619 tol=1.73
2024-07-08 16:03:08,965 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65 pTM=0.422 ipTM=0.616 tol=4.43
2024-07-08 16:03:25,627 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.2 pTM=0.427 ipTM=0.608 tol=4.25
2024-07-08 16:03:42,286 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.1 pTM=0.431 ipTM=0.6 tol=8.4
2024-07-08 16:03:58,944 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.2 pTM=0.429 ipTM=0.586 tol=8.71
2024-07-08 16:04:15,603 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65 pTM=0.425 ipTM=0.617 tol=5.39
2024-07-08 16:04:15,604 alphafold2_multimer_v3_model_1_seed_000 took 665.4s (30 recycles)
2024-07-08 16:04:32,800 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64 pTM=0.391 ipTM=0.174
2024-07-08 16:04:49,525 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.6 pTM=0.362 ipTM=0.196 tol=15.8
2024-07-08 16:05:06,284 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.8 pTM=0.378 ipTM=0.551 tol=10.1
2024-07-08 16:05:23,018 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.7 pTM=0.378 ipTM=0.543 tol=6.64
2024-07-08 16:05:39,778 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.6 pTM=0.379 ipTM=0.534 tol=5.48
2024-07-08 16:05:56,528 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.8 pTM=0.382 ipTM=0.52 tol=5.45
2024-07-08 16:06:13,267 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.9 pTM=0.381 ipTM=0.575 tol=3.74
2024-07-08 16:06:30,001 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66 pTM=0.388 ipTM=0.551 tol=4.41
2024-07-08 16:06:46,733 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.1 pTM=0.387 ipTM=0.547 tol=1.9
2024-07-08 16:07:03,451 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66 pTM=0.392 ipTM=0.561 tol=2.22
2024-07-08 16:07:20,183 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66 pTM=0.391 ipTM=0.545 tol=2.24
2024-07-08 16:07:36,924 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.9 pTM=0.388 ipTM=0.527 tol=3.2
2024-07-08 16:07:53,651 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.9 pTM=0.385 ipTM=0.57 tol=4.53
2024-07-08 16:08:10,381 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.1 pTM=0.386 ipTM=0.575 tol=4.59
2024-07-08 16:08:27,106 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.9 pTM=0.382 ipTM=0.559 tol=3.75
2024-07-08 16:08:43,832 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.8 pTM=0.375 ipTM=0.562 tol=3.54
2024-07-08 16:09:00,560 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.7 pTM=0.378 ipTM=0.554 tol=2.69
2024-07-08 16:09:17,284 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.8 pTM=0.378 ipTM=0.545 tol=2.64
2024-07-08 16:09:34,016 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.8 pTM=0.383 ipTM=0.556 tol=3.02
2024-07-08 16:09:50,741 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.9 pTM=0.383 ipTM=0.547 tol=3.19
2024-07-08 16:10:07,462 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.7 pTM=0.379 ipTM=0.562 tol=2.86
2024-07-08 16:10:24,180 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.6 pTM=0.378 ipTM=0.54 tol=2.07
2024-07-08 16:10:40,910 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.8 pTM=0.376 ipTM=0.563 tol=2.44
2024-07-08 16:10:57,637 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.7 pTM=0.374 ipTM=0.538 tol=2.39
2024-07-08 16:11:14,370 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.8 pTM=0.375 ipTM=0.569 tol=3.22
2024-07-08 16:11:31,091 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.5 pTM=0.38 ipTM=0.55 tol=3.13
2024-07-08 16:11:47,820 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.8 pTM=0.378 ipTM=0.563 tol=2.15
2024-07-08 16:12:04,535 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.7 pTM=0.382 ipTM=0.556 tol=2.73
2024-07-08 16:12:21,265 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.4 pTM=0.381 ipTM=0.556 tol=2.56
2024-07-08 16:12:38,000 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.8 pTM=0.383 ipTM=0.533 tol=3.46
2024-07-08 16:12:54,741 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.6 pTM=0.381 ipTM=0.574 tol=2.53
2024-07-08 16:12:54,742 alphafold2_multimer_v3_model_2_seed_000 took 518.6s (30 recycles)
2024-07-08 16:13:11,942 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.6 pTM=0.405 ipTM=0.435
2024-07-08 16:13:28,666 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.6 pTM=0.379 ipTM=0.226 tol=19.6
2024-07-08 16:13:45,328 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.6 pTM=0.496 ipTM=0.593 tol=13.7
2024-07-08 16:14:01,980 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68 pTM=0.512 ipTM=0.613 tol=8.8
2024-07-08 16:14:18,639 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.1 pTM=0.519 ipTM=0.556 tol=5.03
2024-07-08 16:14:35,292 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.9 pTM=0.516 ipTM=0.581 tol=2.93
2024-07-08 16:14:51,939 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.3 pTM=0.531 ipTM=0.579 tol=3.04
2024-07-08 16:15:08,583 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.6 pTM=0.547 ipTM=0.646 tol=4.81
2024-07-08 16:15:25,229 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.8 pTM=0.558 ipTM=0.654 tol=1.45
2024-07-08 16:15:41,874 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69 pTM=0.559 ipTM=0.611 tol=1.26
2024-07-08 16:15:58,526 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.2 pTM=0.568 ipTM=0.638 tol=1.38
2024-07-08 16:16:15,191 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.4 pTM=0.58 ipTM=0.671 tol=1.68
2024-07-08 16:16:31,837 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.3 pTM=0.576 ipTM=0.66 tol=1.05
2024-07-08 16:16:48,475 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.1 pTM=0.567 ipTM=0.636 tol=1.46
2024-07-08 16:17:05,122 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.2 pTM=0.567 ipTM=0.626 tol=0.773
2024-07-08 16:17:21,762 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.1 pTM=0.561 ipTM=0.61 tol=1.23
2024-07-08 16:17:38,400 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.2 pTM=0.567 ipTM=0.628 tol=0.755
2024-07-08 16:17:55,033 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.1 pTM=0.569 ipTM=0.636 tol=0.799
2024-07-08 16:18:11,674 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.1 pTM=0.566 ipTM=0.636 tol=0.88
2024-07-08 16:18:28,322 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.1 pTM=0.564 ipTM=0.644 tol=0.801
2024-07-08 16:18:44,973 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.9 pTM=0.562 ipTM=0.633 tol=0.84
2024-07-08 16:19:01,619 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.1 pTM=0.565 ipTM=0.625 tol=0.844
2024-07-08 16:19:18,255 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.9 pTM=0.559 ipTM=0.612 tol=0.705
2024-07-08 16:19:34,899 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.1 pTM=0.567 ipTM=0.636 tol=1.18
2024-07-08 16:19:51,555 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.1 pTM=0.566 ipTM=0.644 tol=0.694
2024-07-08 16:20:08,211 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69 pTM=0.565 ipTM=0.65 tol=1.24
2024-07-08 16:20:24,861 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.1 pTM=0.571 ipTM=0.668 tol=0.971
2024-07-08 16:20:41,508 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.3 pTM=0.577 ipTM=0.672 tol=1.75
2024-07-08 16:20:58,163 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.1 pTM=0.569 ipTM=0.648 tol=1.2
2024-07-08 16:21:14,812 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.1 pTM=0.575 ipTM=0.674 tol=1.5
2024-07-08 16:21:31,464 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.2 pTM=0.575 ipTM=0.67 tol=1.2
2024-07-08 16:21:31,465 alphafold2_multimer_v3_model_3_seed_000 took 516.2s (30 recycles)
2024-07-08 16:21:48,671 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.4 pTM=0.425 ipTM=0.18
2024-07-08 16:22:05,387 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.8 pTM=0.385 ipTM=0.212 tol=14.8
2024-07-08 16:22:22,080 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.2 pTM=0.386 ipTM=0.282 tol=7.85
2024-07-08 16:22:38,766 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.4 pTM=0.394 ipTM=0.154 tol=7.02
2024-07-08 16:22:55,458 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.7 pTM=0.41 ipTM=0.193 tol=6.96
2024-07-08 16:23:12,124 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.7 pTM=0.408 ipTM=0.336 tol=6.8
2024-07-08 16:23:28,803 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.9 pTM=0.411 ipTM=0.336 tol=7.75
2024-07-08 16:23:45,476 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.6 pTM=0.41 ipTM=0.626 tol=3.79
2024-07-08 16:24:02,113 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.1 pTM=0.444 ipTM=0.529 tol=8.04
2024-07-08 16:24:18,717 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.5 pTM=0.496 ipTM=0.551 tol=3.09
2024-07-08 16:24:35,322 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.9 pTM=0.519 ipTM=0.609 tol=1.17
2024-07-08 16:24:51,937 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.6 pTM=0.546 ipTM=0.642 tol=2.67
2024-07-08 16:25:08,539 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.2 pTM=0.537 ipTM=0.651 tol=3.02
2024-07-08 16:25:25,146 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.8 pTM=0.562 ipTM=0.69 tol=3.31
2024-07-08 16:25:41,744 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.1 pTM=0.56 ipTM=0.681 tol=3.76
2024-07-08 16:25:58,336 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.3 pTM=0.566 ipTM=0.673 tol=4.43
2024-07-08 16:26:14,933 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.1 pTM=0.557 ipTM=0.66 tol=2.07
2024-07-08 16:26:31,535 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69 pTM=0.565 ipTM=0.69 tol=1.25
2024-07-08 16:26:48,142 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69 pTM=0.561 ipTM=0.694 tol=0.933
2024-07-08 16:27:04,745 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.8 pTM=0.554 ipTM=0.684 tol=0.965
2024-07-08 16:27:21,352 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.4 pTM=0.544 ipTM=0.667 tol=1.18
2024-07-08 16:27:37,963 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.6 pTM=0.548 ipTM=0.652 tol=1.02
2024-07-08 16:27:54,576 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.4 pTM=0.537 ipTM=0.643 tol=1.84
2024-07-08 16:28:11,182 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.6 pTM=0.549 ipTM=0.665 tol=2.81
2024-07-08 16:28:27,801 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.7 pTM=0.541 ipTM=0.653 tol=1.6
2024-07-08 16:28:44,418 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.8 pTM=0.548 ipTM=0.655 tol=1.17
2024-07-08 16:29:01,033 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.4 pTM=0.537 ipTM=0.67 tol=0.901
2024-07-08 16:29:17,651 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.2 pTM=0.564 ipTM=0.671 tol=1.81
2024-07-08 16:29:34,267 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.8 pTM=0.546 ipTM=0.672 tol=2.3
2024-07-08 16:29:50,877 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.1 pTM=0.565 ipTM=0.698 tol=2.43
2024-07-08 16:30:07,497 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69 pTM=0.557 ipTM=0.69 tol=1.24
2024-07-08 16:30:07,498 alphafold2_multimer_v3_model_4_seed_000 took 515.5s (30 recycles)
2024-07-08 16:30:24,728 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.8 pTM=0.396 ipTM=0.42
2024-07-08 16:30:41,487 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.2 pTM=0.381 ipTM=0.22 tol=12.3
2024-07-08 16:30:58,238 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.5 pTM=0.388 ipTM=0.19 tol=20.9
2024-07-08 16:31:14,966 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.7 pTM=0.381 ipTM=0.372 tol=8.03
2024-07-08 16:31:31,721 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65 pTM=0.386 ipTM=0.45 tol=5.36
2024-07-08 16:31:48,464 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=64.5 pTM=0.38 ipTM=0.478 tol=4.87
2024-07-08 16:32:05,207 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.6 pTM=0.418 ipTM=0.518 tol=8.03
2024-07-08 16:32:21,936 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.4 pTM=0.422 ipTM=0.5 tol=3.65
2024-07-08 16:32:38,665 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.5 pTM=0.433 ipTM=0.456 tol=3.88
2024-07-08 16:32:55,398 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.8 pTM=0.437 ipTM=0.471 tol=3.05
2024-07-08 16:33:12,130 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.6 pTM=0.436 ipTM=0.444 tol=3.87
2024-07-08 16:33:28,869 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.8 pTM=0.441 ipTM=0.458 tol=3.83
2024-07-08 16:33:45,599 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.7 pTM=0.439 ipTM=0.478 tol=4.42
2024-07-08 16:34:02,330 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.6 pTM=0.44 ipTM=0.46 tol=2.93
2024-07-08 16:34:19,063 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.7 pTM=0.444 ipTM=0.44 tol=4.12
2024-07-08 16:34:35,810 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.8 pTM=0.445 ipTM=0.443 tol=3.38
2024-07-08 16:34:52,553 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.7 pTM=0.443 ipTM=0.457 tol=3.17
2024-07-08 16:35:09,294 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.6 pTM=0.444 ipTM=0.45 tol=6
2024-07-08 16:35:26,040 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.6 pTM=0.446 ipTM=0.461 tol=4.15
2024-07-08 16:35:42,798 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.8 pTM=0.449 ipTM=0.44 tol=3.32
2024-07-08 16:35:59,556 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.5 pTM=0.444 ipTM=0.444 tol=5.88
2024-07-08 16:36:16,317 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.6 pTM=0.447 ipTM=0.438 tol=4.35
2024-07-08 16:36:33,067 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.7 pTM=0.445 ipTM=0.452 tol=3.86
2024-07-08 16:36:49,814 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.6 pTM=0.444 ipTM=0.417 tol=3.43
2024-07-08 16:37:06,563 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.6 pTM=0.448 ipTM=0.467 tol=2.63
2024-07-08 16:37:23,300 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.6 pTM=0.448 ipTM=0.442 tol=4.36
2024-07-08 16:37:40,038 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.8 pTM=0.451 ipTM=0.468 tol=3.96
2024-07-08 16:37:56,772 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.8 pTM=0.453 ipTM=0.44 tol=4.3
2024-07-08 16:38:13,499 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.4 pTM=0.451 ipTM=0.448 tol=4.32
2024-07-08 16:38:30,241 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.9 pTM=0.457 ipTM=0.444 tol=2.75
2024-07-08 16:38:46,968 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.8 pTM=0.456 ipTM=0.459 tol=4.42
2024-07-08 16:38:46,968 alphafold2_multimer_v3_model_5_seed_000 took 519.0s (30 recycles)
2024-07-08 16:38:47,474 reranking models by 'multimer' metric
2024-07-08 16:38:50,837 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 16:40:01,537 Relaxation took 74.1s
2024-07-08 16:40:01,537 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69 pTM=0.557 ipTM=0.69
2024-07-08 16:41:07,089 Relaxation took 65.6s
2024-07-08 16:41:07,090 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.2 pTM=0.575 ipTM=0.67
2024-07-08 16:42:11,466 Relaxation took 64.4s
2024-07-08 16:42:11,466 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65 pTM=0.425 ipTM=0.617
2024-07-08 16:43:17,380 Relaxation took 65.9s
2024-07-08 16:43:17,380 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.6 pTM=0.381 ipTM=0.574
2024-07-08 16:44:47,825 Relaxation took 90.4s
2024-07-08 16:44:47,826 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.8 pTM=0.456 ipTM=0.459
2024-07-08 16:44:49,534 Done