2024-07-08 16:20:38,343 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 16:20:38,662 Running on GPU
2024-07-08 16:20:42,399 Found 6 citations for tools or databases
2024-07-08 16:20:42,400 Query 1/1: ARI3B_CDKAL (length 1140)
2024-07-08 16:20:43,540 Sleeping for 8s. Reason: PENDING
2024-07-08 16:20:51,964 Sleeping for 6s. Reason: RUNNING
2024-07-08 16:20:58,382 Sleeping for 5s. Reason: RUNNING
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2024-07-08 16:21:34,027 Sleeping for 5s. Reason: RUNNING
2024-07-08 16:21:39,459 Sleeping for 7s. Reason: RUNNING
2024-07-08 16:21:47,088 Sleeping for 6s. Reason: RUNNING
2024-07-08 16:21:53,522 Sleeping for 5s. Reason: RUNNING
2024-07-08 16:21:58,940 Sleeping for 9s. Reason: RUNNING
2024-07-08 16:22:08,351 Sleeping for 5s. Reason: RUNNING
2024-07-08 16:22:13,775 Sleeping for 6s. Reason: RUNNING
2024-07-08 16:22:20,335 Sleeping for 5s. Reason: RUNNING
2024-07-08 16:22:25,764 Sleeping for 6s. Reason: RUNNING
2024-07-08 16:22:32,182 Sleeping for 6s. Reason: RUNNING
2024-07-08 16:22:38,611 Sleeping for 7s. Reason: RUNNING
2024-07-08 16:22:46,085 Sleeping for 6s. Reason: RUNNING
2024-07-08 16:22:52,496 Sleeping for 7s. Reason: RUNNING
2024-07-08 16:23:39,698 Sleeping for 9s. Reason: PENDING
2024-07-08 16:23:49,599 Sleeping for 6s. Reason: RUNNING
2024-07-08 16:23:56,545 Sleeping for 6s. Reason: RUNNING
2024-07-08 16:24:03,034 Sleeping for 7s. Reason: RUNNING
2024-07-08 16:24:10,495 Sleeping for 6s. Reason: RUNNING
2024-07-08 16:24:16,904 Sleeping for 10s. Reason: RUNNING
2024-07-08 16:24:27,332 Sleeping for 8s. Reason: RUNNING
2024-07-08 16:24:35,754 Sleeping for 7s. Reason: RUNNING
2024-07-08 16:24:43,174 Sleeping for 7s. Reason: RUNNING
2024-07-08 16:24:50,595 Sleeping for 8s. Reason: RUNNING
2024-07-08 16:24:59,020 Sleeping for 7s. Reason: RUNNING
2024-07-08 16:25:06,974 Sleeping for 7s. Reason: RUNNING
2024-07-08 16:25:14,941 Sleeping for 5s. Reason: RUNNING
2024-07-08 16:25:20,377 Sleeping for 9s. Reason: RUNNING
2024-07-08 16:25:29,789 Sleeping for 9s. Reason: RUNNING
2024-07-08 16:25:43,141 Setting max_seq=508, max_extra_seq=2048
2024-07-08 16:28:21,534 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.3 pTM=0.467 ipTM=0.196
2024-07-08 16:28:51,210 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.3 pTM=0.466 ipTM=0.176 tol=18.2
2024-07-08 16:29:20,976 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.9 pTM=0.47 ipTM=0.215 tol=9.08
2024-07-08 16:29:50,812 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.8 pTM=0.468 ipTM=0.208 tol=4.28
2024-07-08 16:30:20,677 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.7 pTM=0.467 ipTM=0.193 tol=5.07
2024-07-08 16:30:50,576 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.6 pTM=0.469 ipTM=0.189 tol=7.73
2024-07-08 16:31:20,499 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53.5 pTM=0.468 ipTM=0.201 tol=6.42
2024-07-08 16:31:50,464 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.9 pTM=0.47 ipTM=0.188 tol=5.01
2024-07-08 16:32:20,465 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.7 pTM=0.472 ipTM=0.192 tol=5.92
2024-07-08 16:32:50,478 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.9 pTM=0.47 ipTM=0.185 tol=4.05
2024-07-08 16:33:20,498 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.8 pTM=0.47 ipTM=0.184 tol=5.54
2024-07-08 16:33:50,509 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.9 pTM=0.473 ipTM=0.268 tol=4.9
2024-07-08 16:34:20,521 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.8 pTM=0.474 ipTM=0.211 tol=3.74
2024-07-08 16:34:50,540 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.9 pTM=0.474 ipTM=0.199 tol=2.61
2024-07-08 16:35:20,612 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54 pTM=0.476 ipTM=0.236 tol=2.87
2024-07-08 16:35:50,623 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54 pTM=0.475 ipTM=0.217 tol=2.38
2024-07-08 16:36:20,630 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54 pTM=0.471 ipTM=0.205 tol=2.79
2024-07-08 16:36:50,643 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.8 pTM=0.473 ipTM=0.205 tol=3.51
2024-07-08 16:37:20,656 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=53.7 pTM=0.471 ipTM=0.189 tol=2.73
2024-07-08 16:37:50,658 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.8 pTM=0.473 ipTM=0.195 tol=3.01
2024-07-08 16:38:20,676 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.9 pTM=0.476 ipTM=0.208 tol=4.43
2024-07-08 16:38:50,686 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.8 pTM=0.475 ipTM=0.202 tol=3.63
2024-07-08 16:39:20,691 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=53.9 pTM=0.476 ipTM=0.211 tol=4.61
2024-07-08 16:39:50,707 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.1 pTM=0.474 ipTM=0.21 tol=6.4
2024-07-08 16:40:20,733 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54 pTM=0.473 ipTM=0.205 tol=4.81
2024-07-08 16:40:50,781 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.8 pTM=0.474 ipTM=0.214 tol=4.03
2024-07-08 16:41:20,780 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54 pTM=0.473 ipTM=0.199 tol=2.63
2024-07-08 16:41:50,797 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.9 pTM=0.47 ipTM=0.191 tol=1.89
2024-07-08 16:42:20,805 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54 pTM=0.472 ipTM=0.203 tol=3.93
2024-07-08 16:42:50,813 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54 pTM=0.473 ipTM=0.207 tol=4.69
2024-07-08 16:43:20,807 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.7 pTM=0.47 ipTM=0.197 tol=4.04
2024-07-08 16:43:20,808 alphafold2_multimer_v3_model_1_seed_000 took 1052.8s (30 recycles)
2024-07-08 16:43:51,578 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.4 pTM=0.472 ipTM=0.193
2024-07-08 16:44:21,692 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54.7 pTM=0.47 ipTM=0.187 tol=19.9
2024-07-08 16:44:51,773 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.3 pTM=0.479 ipTM=0.214 tol=13.4
2024-07-08 16:45:21,853 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.2 pTM=0.481 ipTM=0.218 tol=5.28
2024-07-08 16:45:51,964 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.4 pTM=0.482 ipTM=0.225 tol=4.66
2024-07-08 16:46:22,105 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=55.6 pTM=0.485 ipTM=0.246 tol=5.99
2024-07-08 16:46:52,251 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55.8 pTM=0.49 ipTM=0.262 tol=3.03
2024-07-08 16:47:22,361 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56 pTM=0.492 ipTM=0.273 tol=2
2024-07-08 16:47:52,475 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.9 pTM=0.493 ipTM=0.281 tol=3.19
2024-07-08 16:48:22,605 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.3 pTM=0.494 ipTM=0.284 tol=4.22
2024-07-08 16:48:52,719 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56.2 pTM=0.495 ipTM=0.296 tol=3.39
2024-07-08 16:49:22,820 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56.2 pTM=0.495 ipTM=0.298 tol=2.37
2024-07-08 16:49:52,919 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.2 pTM=0.498 ipTM=0.312 tol=3.76
2024-07-08 16:50:23,011 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56.2 pTM=0.498 ipTM=0.304 tol=3.12
2024-07-08 16:50:53,139 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.3 pTM=0.5 ipTM=0.326 tol=5
2024-07-08 16:51:23,247 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.3 pTM=0.5 ipTM=0.324 tol=3.31
2024-07-08 16:51:53,376 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.3 pTM=0.498 ipTM=0.314 tol=2.6
2024-07-08 16:52:23,500 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.2 pTM=0.496 ipTM=0.301 tol=2.56
2024-07-08 16:52:53,614 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.3 pTM=0.501 ipTM=0.326 tol=2.48
2024-07-08 16:53:23,727 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.3 pTM=0.5 ipTM=0.316 tol=2.73
2024-07-08 16:53:53,824 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.2 pTM=0.5 ipTM=0.313 tol=3.66
2024-07-08 16:54:23,943 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.3 pTM=0.5 ipTM=0.316 tol=3.58
2024-07-08 16:54:54,084 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.2 pTM=0.499 ipTM=0.318 tol=3.16
2024-07-08 16:55:24,217 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.4 pTM=0.502 ipTM=0.329 tol=2.66
2024-07-08 16:55:54,335 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.2 pTM=0.499 ipTM=0.316 tol=3.37
2024-07-08 16:56:24,455 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=56.3 pTM=0.498 ipTM=0.305 tol=3.98
2024-07-08 16:56:54,576 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.2 pTM=0.498 ipTM=0.31 tol=3.97
2024-07-08 16:57:24,709 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.4 pTM=0.499 ipTM=0.315 tol=3.74
2024-07-08 16:57:54,836 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.2 pTM=0.499 ipTM=0.313 tol=3.79
2024-07-08 16:58:24,972 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.4 pTM=0.5 ipTM=0.315 tol=2.87
2024-07-08 16:58:55,077 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.4 pTM=0.499 ipTM=0.316 tol=2.28
2024-07-08 16:58:55,078 alphafold2_multimer_v3_model_2_seed_000 took 933.5s (30 recycles)
2024-07-08 16:59:26,065 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.3 pTM=0.475 ipTM=0.187
2024-07-08 16:59:56,331 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.1 pTM=0.474 ipTM=0.202 tol=14
2024-07-08 17:00:26,572 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.5 pTM=0.487 ipTM=0.286 tol=15.3
2024-07-08 17:00:56,804 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.6 pTM=0.484 ipTM=0.27 tol=8.95
2024-07-08 17:01:27,035 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.4 pTM=0.511 ipTM=0.385 tol=5.43
2024-07-08 17:01:57,237 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.2 pTM=0.534 ipTM=0.5 tol=4.95
2024-07-08 17:02:27,411 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.8 pTM=0.549 ipTM=0.574 tol=6.01
2024-07-08 17:02:57,614 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.2 pTM=0.558 ipTM=0.609 tol=3.79
2024-07-08 17:03:27,830 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.3 pTM=0.562 ipTM=0.621 tol=2.2
2024-07-08 17:03:58,066 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.4 pTM=0.565 ipTM=0.637 tol=4.75
2024-07-08 17:04:28,264 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.6 pTM=0.566 ipTM=0.651 tol=3.25
2024-07-08 17:04:58,467 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.5 pTM=0.567 ipTM=0.651 tol=2.46
2024-07-08 17:05:28,667 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.6 pTM=0.567 ipTM=0.655 tol=2.64
2024-07-08 17:05:58,872 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.5 pTM=0.568 ipTM=0.65 tol=2.8
2024-07-08 17:06:29,089 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.8 pTM=0.569 ipTM=0.663 tol=2.83
2024-07-08 17:06:59,295 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.5 pTM=0.567 ipTM=0.649 tol=2.38
2024-07-08 17:07:29,518 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.6 pTM=0.567 ipTM=0.657 tol=3.27
2024-07-08 17:07:59,734 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.6 pTM=0.57 ipTM=0.662 tol=2.35
2024-07-08 17:08:29,940 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.7 pTM=0.569 ipTM=0.666 tol=2.95
2024-07-08 17:09:00,147 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.6 pTM=0.569 ipTM=0.652 tol=3.16
2024-07-08 17:09:30,361 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.7 pTM=0.569 ipTM=0.66 tol=1.89
2024-07-08 17:10:00,556 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.7 pTM=0.57 ipTM=0.66 tol=2.96
2024-07-08 17:10:30,763 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.7 pTM=0.568 ipTM=0.666 tol=2.72
2024-07-08 17:11:00,959 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.6 pTM=0.569 ipTM=0.666 tol=1.91
2024-07-08 17:11:31,171 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.9 pTM=0.572 ipTM=0.671 tol=1.99
2024-07-08 17:12:01,376 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.6 pTM=0.569 ipTM=0.664 tol=2.36
2024-07-08 17:12:31,595 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.8 pTM=0.57 ipTM=0.667 tol=2.48
2024-07-08 17:13:01,790 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.7 pTM=0.57 ipTM=0.666 tol=1.73
2024-07-08 17:13:31,987 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.7 pTM=0.57 ipTM=0.665 tol=1.78
2024-07-08 17:14:02,187 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.7 pTM=0.569 ipTM=0.667 tol=1.25
2024-07-08 17:14:32,360 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.8 pTM=0.57 ipTM=0.664 tol=1.82
2024-07-08 17:14:32,361 alphafold2_multimer_v3_model_3_seed_000 took 936.5s (30 recycles)
2024-07-08 17:15:03,413 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53 pTM=0.472 ipTM=0.215
2024-07-08 17:15:33,685 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.5 pTM=0.503 ipTM=0.274 tol=20.6
2024-07-08 17:16:03,952 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.1 pTM=0.488 ipTM=0.276 tol=11.9
2024-07-08 17:16:34,226 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53 pTM=0.49 ipTM=0.246 tol=6.69
2024-07-08 17:17:04,534 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.1 pTM=0.487 ipTM=0.211 tol=10.4
2024-07-08 17:17:34,829 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.3 pTM=0.493 ipTM=0.248 tol=9.8
2024-07-08 17:18:05,154 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.2 pTM=0.488 ipTM=0.208 tol=10.7
2024-07-08 17:18:35,472 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.8 pTM=0.493 ipTM=0.243 tol=7.64
2024-07-08 17:19:05,780 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.9 pTM=0.495 ipTM=0.274 tol=5.48
2024-07-08 17:19:36,104 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.8 pTM=0.494 ipTM=0.27 tol=4.27
2024-07-08 17:20:06,445 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=54 pTM=0.493 ipTM=0.272 tol=7.3
2024-07-08 17:20:36,761 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.8 pTM=0.494 ipTM=0.277 tol=6.89
2024-07-08 17:21:07,105 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.8 pTM=0.491 ipTM=0.274 tol=2.85
2024-07-08 17:21:37,422 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.8 pTM=0.495 ipTM=0.265 tol=9.9
2024-07-08 17:22:07,759 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.7 pTM=0.49 ipTM=0.253 tol=7.45
2024-07-08 17:22:38,078 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.6 pTM=0.488 ipTM=0.256 tol=7.63
2024-07-08 17:23:08,394 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.6 pTM=0.489 ipTM=0.225 tol=5.46
2024-07-08 17:23:38,735 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.8 pTM=0.494 ipTM=0.251 tol=4.8
2024-07-08 17:24:09,061 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.5 pTM=0.491 ipTM=0.218 tol=5.52
2024-07-08 17:24:39,354 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.4 pTM=0.494 ipTM=0.25 tol=5.84
2024-07-08 17:25:09,654 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.3 pTM=0.493 ipTM=0.245 tol=6.03
2024-07-08 17:25:39,964 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.6 pTM=0.497 ipTM=0.256 tol=4.61
2024-07-08 17:26:10,292 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.6 pTM=0.493 ipTM=0.228 tol=6.6
2024-07-08 17:26:40,624 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.6 pTM=0.497 ipTM=0.243 tol=3.48
2024-07-08 17:27:10,991 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.4 pTM=0.492 ipTM=0.218 tol=3.62
2024-07-08 17:27:41,323 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.7 pTM=0.495 ipTM=0.246 tol=6.45
2024-07-08 17:28:11,669 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.4 pTM=0.487 ipTM=0.205 tol=8.66
2024-07-08 17:28:41,982 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.4 pTM=0.494 ipTM=0.244 tol=6.95
2024-07-08 17:29:12,322 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.3 pTM=0.49 ipTM=0.218 tol=4.58
2024-07-08 17:29:42,650 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.6 pTM=0.497 ipTM=0.248 tol=4.93
2024-07-08 17:30:12,986 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.4 pTM=0.491 ipTM=0.221 tol=6.28
2024-07-08 17:30:12,987 alphafold2_multimer_v3_model_4_seed_000 took 939.8s (30 recycles)
2024-07-08 17:30:44,052 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.3 pTM=0.468 ipTM=0.177
2024-07-08 17:31:14,350 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.1 pTM=0.466 ipTM=0.165 tol=14.4
2024-07-08 17:31:44,687 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.5 pTM=0.465 ipTM=0.162 tol=11.3
2024-07-08 17:32:15,050 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.2 pTM=0.464 ipTM=0.163 tol=6.73
2024-07-08 17:32:45,385 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.4 pTM=0.464 ipTM=0.161 tol=3.91
2024-07-08 17:33:15,740 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.4 pTM=0.466 ipTM=0.168 tol=3.69
2024-07-08 17:33:46,097 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.6 pTM=0.466 ipTM=0.162 tol=6.15
2024-07-08 17:34:16,441 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.8 pTM=0.468 ipTM=0.163 tol=6.35
2024-07-08 17:34:46,765 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.7 pTM=0.469 ipTM=0.163 tol=5.18
2024-07-08 17:35:17,087 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.8 pTM=0.47 ipTM=0.165 tol=3
2024-07-08 17:35:47,388 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.8 pTM=0.469 ipTM=0.166 tol=4.62
2024-07-08 17:36:17,696 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.8 pTM=0.469 ipTM=0.168 tol=2.72
2024-07-08 17:36:47,992 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.7 pTM=0.469 ipTM=0.169 tol=2.53
2024-07-08 17:37:18,299 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55 pTM=0.472 ipTM=0.17 tol=2.26
2024-07-08 17:37:48,580 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.8 pTM=0.47 ipTM=0.171 tol=2.11
2024-07-08 17:38:18,880 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.9 pTM=0.472 ipTM=0.168 tol=5.53
2024-07-08 17:38:49,172 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54.7 pTM=0.469 ipTM=0.168 tol=2.59
2024-07-08 17:39:19,489 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.9 pTM=0.471 ipTM=0.168 tol=5.27
2024-07-08 17:39:49,776 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.8 pTM=0.47 ipTM=0.168 tol=2.96
2024-07-08 17:40:20,045 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.8 pTM=0.47 ipTM=0.167 tol=2.67
2024-07-08 17:40:50,294 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.7 pTM=0.469 ipTM=0.168 tol=5.04
2024-07-08 17:41:20,564 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.8 pTM=0.471 ipTM=0.167 tol=4.86
2024-07-08 17:41:50,806 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.8 pTM=0.47 ipTM=0.167 tol=1.86
2024-07-08 17:42:21,059 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55 pTM=0.471 ipTM=0.168 tol=2.39
2024-07-08 17:42:51,325 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55 pTM=0.471 ipTM=0.169 tol=1.77
2024-07-08 17:43:21,582 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55 pTM=0.472 ipTM=0.168 tol=1.94
2024-07-08 17:43:51,862 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55 pTM=0.471 ipTM=0.17 tol=4.68
2024-07-08 17:44:22,160 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55 pTM=0.471 ipTM=0.172 tol=4.74
2024-07-08 17:44:52,462 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55 pTM=0.473 ipTM=0.171 tol=1.74
2024-07-08 17:45:22,775 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.1 pTM=0.472 ipTM=0.17 tol=1.76
2024-07-08 17:45:53,096 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55 pTM=0.471 ipTM=0.172 tol=5.16
2024-07-08 17:45:53,097 alphafold2_multimer_v3_model_5_seed_000 took 939.3s (30 recycles)
2024-07-08 17:45:53,885 reranking models by 'multimer' metric
2024-07-08 17:45:57,436 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 17:47:16,144 Relaxation took 82.3s
2024-07-08 17:47:16,144 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.8 pTM=0.57 ipTM=0.664
2024-07-08 17:48:42,726 Relaxation took 86.6s
2024-07-08 17:48:42,726 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.4 pTM=0.499 ipTM=0.316
2024-07-08 17:50:22,796 Relaxation took 100.1s
2024-07-08 17:50:22,796 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.4 pTM=0.491 ipTM=0.221
2024-07-08 17:51:37,760 Relaxation took 75.0s
2024-07-08 17:51:37,760 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.7 pTM=0.47 ipTM=0.197
2024-07-08 17:52:44,563 Relaxation took 66.8s
2024-07-08 17:52:44,563 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55 pTM=0.471 ipTM=0.172
2024-07-08 17:52:46,725 Done