2024-07-08 16:42:53,178 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-08 16:42:53,495 Running on GPU 2024-07-08 16:42:57,387 Found 6 citations for tools or databases 2024-07-08 16:42:57,388 Query 1/1: ASB15_SMAD6 (length 1084) 2024-07-08 16:42:57,847 Sleeping for 7s. Reason: PENDING 2024-07-08 16:43:05,273 Sleeping for 6s. Reason: RUNNING 2024-07-08 16:43:11,709 Sleeping for 9s. Reason: RUNNING 2024-07-08 16:43:21,128 Sleeping for 7s. Reason: RUNNING 2024-07-08 16:43:29,041 Sleeping for 8s. Reason: RUNNING 2024-07-08 16:43:37,468 Sleeping for 6s. Reason: RUNNING 2024-07-08 16:43:43,887 Sleeping for 8s. Reason: RUNNING 2024-07-08 16:43:53,006 Sleeping for 8s. Reason: RUNNING 2024-07-08 16:44:01,415 Sleeping for 7s. Reason: RUNNING 2024-07-08 16:44:09,326 Sleeping for 5s. Reason: RUNNING 2024-07-08 16:44:14,755 Sleeping for 6s. Reason: RUNNING 2024-07-08 16:44:21,406 Sleeping for 8s. Reason: RUNNING 2024-07-08 16:44:30,177 Sleeping for 9s. Reason: RUNNING 2024-07-08 16:44:39,594 Sleeping for 6s. Reason: RUNNING 2024-07-08 16:44:46,014 Sleeping for 6s. Reason: RUNNING 2024-07-08 16:45:05,034 Sleeping for 8s. Reason: PENDING 2024-07-08 16:45:13,486 Sleeping for 9s. Reason: RUNNING 2024-07-08 16:45:22,910 Sleeping for 6s. Reason: RUNNING 2024-07-08 16:45:29,327 Sleeping for 10s. Reason: RUNNING 2024-07-08 16:45:40,005 Sleeping for 8s. Reason: RUNNING 2024-07-08 16:45:48,435 Sleeping for 6s. Reason: RUNNING 2024-07-08 16:45:54,851 Sleeping for 5s. Reason: RUNNING 2024-07-08 16:46:00,266 Sleeping for 9s. Reason: RUNNING 2024-07-08 16:46:09,679 Sleeping for 8s. Reason: RUNNING 2024-07-08 16:46:18,113 Sleeping for 6s. Reason: RUNNING 2024-07-08 16:46:27,505 Setting max_seq=508, max_extra_seq=2048 2024-07-08 16:48:59,146 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.1 pTM=0.539 ipTM=0.203 2024-07-08 16:49:24,804 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.9 pTM=0.537 ipTM=0.208 tol=7.73 2024-07-08 16:49:50,523 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.4 pTM=0.532 ipTM=0.215 tol=5.15 2024-07-08 16:50:16,318 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.8 pTM=0.539 ipTM=0.195 tol=5.34 2024-07-08 16:50:42,145 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.2 pTM=0.537 ipTM=0.2 tol=2.6 2024-07-08 16:51:07,993 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.4 pTM=0.541 ipTM=0.212 tol=1.5 2024-07-08 16:51:33,861 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.3 pTM=0.539 ipTM=0.221 tol=1.22 2024-07-08 16:51:59,772 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.4 pTM=0.544 ipTM=0.207 tol=1.15 2024-07-08 16:52:25,691 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.4 pTM=0.542 ipTM=0.228 tol=1.16 2024-07-08 16:52:51,586 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.5 pTM=0.544 ipTM=0.221 tol=1.11 2024-07-08 16:53:17,495 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.2 pTM=0.541 ipTM=0.208 tol=1.05 2024-07-08 16:53:43,404 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.4 pTM=0.542 ipTM=0.206 tol=1.01 2024-07-08 16:54:09,324 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.3 pTM=0.543 ipTM=0.205 tol=0.91 2024-07-08 16:54:35,224 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=68.4 pTM=0.543 ipTM=0.213 tol=0.916 2024-07-08 16:55:01,136 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.3 pTM=0.541 ipTM=0.215 tol=0.86 2024-07-08 16:55:27,039 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.4 pTM=0.542 ipTM=0.203 tol=0.681 2024-07-08 16:55:52,961 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.5 pTM=0.541 ipTM=0.2 tol=0.734 2024-07-08 16:56:18,855 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.1 pTM=0.54 ipTM=0.203 tol=0.741 2024-07-08 16:56:44,797 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.6 pTM=0.542 ipTM=0.213 tol=1.72 2024-07-08 16:57:10,683 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.6 pTM=0.543 ipTM=0.236 tol=1.59 2024-07-08 16:57:36,574 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.2 pTM=0.538 ipTM=0.193 tol=1.12 2024-07-08 16:58:02,442 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.5 pTM=0.54 ipTM=0.199 tol=1.11 2024-07-08 16:58:28,338 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.5 pTM=0.542 ipTM=0.199 tol=1.28 2024-07-08 16:58:54,200 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.2 pTM=0.54 ipTM=0.226 tol=1.9 2024-07-08 16:59:20,086 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.5 pTM=0.539 ipTM=0.232 tol=2.36 2024-07-08 16:59:45,969 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.3 pTM=0.54 ipTM=0.224 tol=1.57 2024-07-08 17:00:11,873 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.6 pTM=0.542 ipTM=0.202 tol=1.67 2024-07-08 17:00:37,769 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.4 pTM=0.54 ipTM=0.2 tol=1.18 2024-07-08 17:01:03,674 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.3 pTM=0.539 ipTM=0.194 tol=1.91 2024-07-08 17:01:29,555 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.3 pTM=0.535 ipTM=0.196 tol=2.95 2024-07-08 17:01:55,449 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.2 pTM=0.538 ipTM=0.194 tol=1.44 2024-07-08 17:01:55,450 alphafold2_multimer_v3_model_1_seed_000 took 923.9s (30 recycles) 2024-07-08 17:02:22,072 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.8 pTM=0.536 ipTM=0.194 2024-07-08 17:02:47,973 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.8 pTM=0.574 ipTM=0.282 tol=18.4 2024-07-08 17:03:13,861 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.4 pTM=0.553 ipTM=0.239 tol=7.21 2024-07-08 17:03:39,822 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.4 pTM=0.543 ipTM=0.203 tol=5.72 2024-07-08 17:04:05,706 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.6 pTM=0.55 ipTM=0.232 tol=5.04 2024-07-08 17:04:31,623 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.9 pTM=0.544 ipTM=0.206 tol=1.64 2024-07-08 17:04:57,574 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.5 pTM=0.54 ipTM=0.191 tol=3.33 2024-07-08 17:05:23,455 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.9 pTM=0.554 ipTM=0.236 tol=6.39 2024-07-08 17:05:49,360 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.7 pTM=0.545 ipTM=0.209 tol=4.21 2024-07-08 17:06:15,313 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.8 pTM=0.542 ipTM=0.191 tol=3.37 2024-07-08 17:06:41,211 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.7 pTM=0.544 ipTM=0.21 tol=3.45 2024-07-08 17:07:07,087 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.8 pTM=0.548 ipTM=0.227 tol=3.92 2024-07-08 17:07:32,997 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.8 pTM=0.549 ipTM=0.228 tol=4.06 2024-07-08 17:07:58,901 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.1 pTM=0.554 ipTM=0.236 tol=3.24 2024-07-08 17:08:24,804 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.6 pTM=0.547 ipTM=0.229 tol=4.35 2024-07-08 17:08:50,704 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.8 pTM=0.554 ipTM=0.241 tol=3.39 2024-07-08 17:09:16,629 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.9 pTM=0.547 ipTM=0.212 tol=2.42 2024-07-08 17:09:42,579 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.5 pTM=0.538 ipTM=0.189 tol=4.07 2024-07-08 17:10:08,505 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70 pTM=0.548 ipTM=0.213 tol=4.29 2024-07-08 17:10:34,407 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.2 pTM=0.569 ipTM=0.282 tol=3.32 2024-07-08 17:11:00,328 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.8 pTM=0.551 ipTM=0.224 tol=3.43 2024-07-08 17:11:26,265 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.7 pTM=0.542 ipTM=0.199 tol=5.01 2024-07-08 17:11:52,158 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.8 pTM=0.557 ipTM=0.251 tol=3.89 2024-07-08 17:12:18,048 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.6 pTM=0.546 ipTM=0.219 tol=2.45 2024-07-08 17:12:44,010 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.4 pTM=0.538 ipTM=0.187 tol=12.8 2024-07-08 17:13:09,989 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.8 pTM=0.54 ipTM=0.187 tol=7.09 2024-07-08 17:13:35,930 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.9 pTM=0.541 ipTM=0.196 tol=5.81 2024-07-08 17:14:01,889 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.9 pTM=0.54 ipTM=0.191 tol=5.22 2024-07-08 17:14:27,844 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.9 pTM=0.54 ipTM=0.193 tol=3.52 2024-07-08 17:14:53,793 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.8 pTM=0.54 ipTM=0.202 tol=1.88 2024-07-08 17:15:19,729 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.1 pTM=0.545 ipTM=0.221 tol=1.83 2024-07-08 17:15:19,730 alphafold2_multimer_v3_model_2_seed_000 took 803.6s (30 recycles) 2024-07-08 17:15:46,389 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.2 pTM=0.54 ipTM=0.215 2024-07-08 17:16:12,350 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.6 pTM=0.539 ipTM=0.199 tol=12.3 2024-07-08 17:16:38,238 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.4 pTM=0.604 ipTM=0.394 tol=8.02 2024-07-08 17:17:04,206 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.3 pTM=0.539 ipTM=0.197 tol=5.04 2024-07-08 17:17:30,218 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.8 pTM=0.533 ipTM=0.181 tol=9.94 2024-07-08 17:17:56,146 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.4 pTM=0.561 ipTM=0.242 tol=9.42 2024-07-08 17:18:22,070 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.8 pTM=0.55 ipTM=0.22 tol=2.76 2024-07-08 17:18:48,017 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.4 pTM=0.548 ipTM=0.206 tol=3.77 2024-07-08 17:19:13,895 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70 pTM=0.571 ipTM=0.264 tol=3.76 2024-07-08 17:19:39,791 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.6 pTM=0.556 ipTM=0.225 tol=1.62 2024-07-08 17:20:05,740 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.8 pTM=0.542 ipTM=0.2 tol=3.37 2024-07-08 17:20:31,752 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.6 pTM=0.537 ipTM=0.183 tol=7.25 2024-07-08 17:20:57,720 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.8 pTM=0.539 ipTM=0.197 tol=5.25 2024-07-08 17:21:23,716 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.5 pTM=0.539 ipTM=0.186 tol=5.52 2024-07-08 17:21:49,663 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.6 pTM=0.54 ipTM=0.201 tol=5.99 2024-07-08 17:22:15,652 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.5 pTM=0.539 ipTM=0.186 tol=6.08 2024-07-08 17:22:41,625 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.1 pTM=0.546 ipTM=0.204 tol=6.23 2024-07-08 17:23:07,597 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.4 pTM=0.542 ipTM=0.191 tol=5.31 2024-07-08 17:23:33,531 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.1 pTM=0.55 ipTM=0.21 tol=4.28 2024-07-08 17:23:59,512 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.6 pTM=0.543 ipTM=0.191 tol=5.35 2024-07-08 17:24:25,422 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=69.9 pTM=0.57 ipTM=0.263 tol=3.8 2024-07-08 17:24:51,404 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.8 pTM=0.538 ipTM=0.187 tol=3.59 2024-07-08 17:25:17,449 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.3 pTM=0.534 ipTM=0.176 tol=13.8 2024-07-08 17:25:43,400 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.6 pTM=0.551 ipTM=0.213 tol=14.3 2024-07-08 17:26:09,367 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.7 pTM=0.542 ipTM=0.201 tol=4.11 2024-07-08 17:26:35,378 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.4 pTM=0.541 ipTM=0.186 tol=4.15 2024-07-08 17:27:01,280 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.8 pTM=0.567 ipTM=0.254 tol=4.27 2024-07-08 17:27:27,297 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.2 pTM=0.536 ipTM=0.181 tol=14.9 2024-07-08 17:27:53,303 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.4 pTM=0.537 ipTM=0.179 tol=11.1 2024-07-08 17:28:19,251 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.7 pTM=0.553 ipTM=0.219 tol=5.81 2024-07-08 17:28:45,195 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.4 pTM=0.554 ipTM=0.222 tol=3.96 2024-07-08 17:28:45,196 alphafold2_multimer_v3_model_3_seed_000 took 804.7s (30 recycles) 2024-07-08 17:29:11,805 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.4 pTM=0.544 ipTM=0.204 2024-07-08 17:29:37,711 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.4 pTM=0.549 ipTM=0.217 tol=8.86 2024-07-08 17:30:03,630 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.9 pTM=0.554 ipTM=0.226 tol=7.29 2024-07-08 17:30:29,589 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.2 pTM=0.546 ipTM=0.207 tol=3.67 2024-07-08 17:30:55,526 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.2 pTM=0.553 ipTM=0.225 tol=3.1 2024-07-08 17:31:21,510 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.2 pTM=0.542 ipTM=0.195 tol=4.61 2024-07-08 17:31:47,441 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.4 pTM=0.56 ipTM=0.241 tol=4.27 2024-07-08 17:32:13,455 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.6 pTM=0.538 ipTM=0.184 tol=5.15 2024-07-08 17:32:39,388 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.6 pTM=0.583 ipTM=0.294 tol=3.91 2024-07-08 17:33:05,345 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.4 pTM=0.562 ipTM=0.254 tol=3.8 2024-07-08 17:33:31,259 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.6 pTM=0.578 ipTM=0.297 tol=3 2024-07-08 17:33:57,192 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.5 pTM=0.554 ipTM=0.221 tol=2.65 2024-07-08 17:34:23,112 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.5 pTM=0.57 ipTM=0.257 tol=3.17 2024-07-08 17:34:49,055 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.2 pTM=0.553 ipTM=0.233 tol=4.38 2024-07-08 17:35:14,964 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.6 pTM=0.565 ipTM=0.309 tol=3.32 2024-07-08 17:35:40,904 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.1 pTM=0.549 ipTM=0.207 tol=4.09 2024-07-08 17:36:06,844 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.8 pTM=0.562 ipTM=0.234 tol=5.32 2024-07-08 17:36:32,783 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.2 pTM=0.554 ipTM=0.219 tol=4.64 2024-07-08 17:36:58,709 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69 pTM=0.576 ipTM=0.276 tol=2.88 2024-07-08 17:37:24,656 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.2 pTM=0.554 ipTM=0.213 tol=2.52 2024-07-08 17:37:50,575 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.6 pTM=0.565 ipTM=0.245 tol=3.6 2024-07-08 17:38:16,525 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.9 pTM=0.548 ipTM=0.244 tol=4.69 2024-07-08 17:38:42,470 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.7 pTM=0.559 ipTM=0.226 tol=4.72 2024-07-08 17:39:08,405 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.2 pTM=0.553 ipTM=0.216 tol=5.15 2024-07-08 17:39:34,337 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69 pTM=0.562 ipTM=0.233 tol=3.72 2024-07-08 17:40:00,274 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.2 pTM=0.558 ipTM=0.218 tol=3.44 2024-07-08 17:40:26,198 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.8 pTM=0.559 ipTM=0.265 tol=3.82 2024-07-08 17:40:52,125 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.8 pTM=0.554 ipTM=0.214 tol=4.45 2024-07-08 17:41:18,059 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.8 pTM=0.563 ipTM=0.238 tol=4.84 2024-07-08 17:41:44,006 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.2 pTM=0.551 ipTM=0.208 tol=5.43 2024-07-08 17:42:09,954 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.9 pTM=0.557 ipTM=0.222 tol=5.99 2024-07-08 17:42:09,955 alphafold2_multimer_v3_model_4_seed_000 took 804.0s (30 recycles) 2024-07-08 17:42:36,610 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.2 pTM=0.538 ipTM=0.206 2024-07-08 17:43:02,622 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.4 pTM=0.529 ipTM=0.175 tol=5.93 2024-07-08 17:43:28,624 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.9 pTM=0.535 ipTM=0.188 tol=4.56 2024-07-08 17:43:54,647 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.5 pTM=0.535 ipTM=0.177 tol=4.86 2024-07-08 17:44:20,682 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.4 pTM=0.532 ipTM=0.181 tol=5.05 2024-07-08 17:44:46,731 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.5 pTM=0.533 ipTM=0.175 tol=7.3 2024-07-08 17:45:12,735 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.1 pTM=0.533 ipTM=0.186 tol=9.46 2024-07-08 17:45:38,748 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.3 pTM=0.533 ipTM=0.181 tol=4.89 2024-07-08 17:46:04,790 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.6 pTM=0.535 ipTM=0.18 tol=5.32 2024-07-08 17:46:30,795 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.2 pTM=0.533 ipTM=0.182 tol=6.53 2024-07-08 17:46:56,822 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.3 pTM=0.532 ipTM=0.179 tol=5.95 2024-07-08 17:47:22,824 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.4 pTM=0.536 ipTM=0.184 tol=5.61 2024-07-08 17:47:48,870 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.4 pTM=0.533 ipTM=0.178 tol=6.36 2024-07-08 17:48:14,895 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.6 pTM=0.532 ipTM=0.175 tol=4.71 2024-07-08 17:48:40,930 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.4 pTM=0.53 ipTM=0.176 tol=5.11 2024-07-08 17:49:06,951 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.3 pTM=0.532 ipTM=0.179 tol=3.48 2024-07-08 17:49:33,008 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.5 pTM=0.533 ipTM=0.176 tol=2.83 2024-07-08 17:49:59,043 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.4 pTM=0.533 ipTM=0.178 tol=4.4 2024-07-08 17:50:25,079 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.5 pTM=0.533 ipTM=0.178 tol=6.46 2024-07-08 17:50:51,119 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.4 pTM=0.534 ipTM=0.178 tol=4.36 2024-07-08 17:51:17,191 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.4 pTM=0.53 ipTM=0.171 tol=5.22 2024-07-08 17:51:43,202 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69 pTM=0.535 ipTM=0.183 tol=7.32 2024-07-08 17:52:09,247 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.2 pTM=0.529 ipTM=0.178 tol=7.45 2024-07-08 17:52:35,252 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.1 pTM=0.533 ipTM=0.181 tol=4.88 2024-07-08 17:53:01,262 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.1 pTM=0.527 ipTM=0.177 tol=4.77 2024-07-08 17:53:27,266 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.4 pTM=0.534 ipTM=0.178 tol=4.85 2024-07-08 17:53:53,257 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.1 pTM=0.53 ipTM=0.182 tol=3.9 2024-07-08 17:54:19,226 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.8 pTM=0.536 ipTM=0.187 tol=4.07 2024-07-08 17:54:45,212 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69 pTM=0.529 ipTM=0.18 tol=4.63 2024-07-08 17:55:11,173 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.3 pTM=0.532 ipTM=0.181 tol=3.68 2024-07-08 17:55:37,141 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.2 pTM=0.53 ipTM=0.183 tol=3.83 2024-07-08 17:55:37,142 alphafold2_multimer_v3_model_5_seed_000 took 806.5s (30 recycles) 2024-07-08 17:55:37,855 reranking models by 'multimer' metric 2024-07-08 17:55:41,405 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-08 17:57:16,238 Relaxation took 98.4s 2024-07-08 17:57:16,238 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.9 pTM=0.557 ipTM=0.222 2024-07-08 17:59:11,704 Relaxation took 115.5s 2024-07-08 17:59:11,704 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.4 pTM=0.554 ipTM=0.222 2024-07-08 18:01:24,813 Relaxation took 133.1s 2024-07-08 18:01:24,814 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.1 pTM=0.545 ipTM=0.221 2024-07-08 18:02:54,609 Relaxation took 89.8s 2024-07-08 18:02:54,609 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.2 pTM=0.538 ipTM=0.194 2024-07-08 18:04:36,852 Relaxation took 102.2s 2024-07-08 18:04:36,852 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.2 pTM=0.53 ipTM=0.183 2024-07-08 18:04:38,889 Done