2024-07-08 17:49:25,503 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 17:49:25,817 Running on GPU
2024-07-08 17:49:29,465 Found 6 citations for tools or databases
2024-07-08 17:49:29,465 Query 1/1: ATP7B_SARNP (length 1675)
2024-07-08 17:49:29,898 Sleeping for 9s. Reason: PENDING
2024-07-08 17:49:39,303 Sleeping for 7s. Reason: RUNNING
2024-07-08 17:49:46,728 Sleeping for 8s. Reason: RUNNING
2024-07-08 17:49:55,143 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:50:05,568 Sleeping for 6s. Reason: RUNNING
2024-07-08 17:50:11,987 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:50:21,739 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:50:27,151 Sleeping for 7s. Reason: RUNNING
2024-07-08 17:50:34,561 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:50:44,977 Sleeping for 7s. Reason: RUNNING
2024-07-08 17:50:52,396 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:50:57,820 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:51:03,267 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:51:12,696 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:51:22,649 Sleeping for 8s. Reason: RUNNING
2024-07-08 17:51:31,070 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:51:41,494 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:51:46,911 Sleeping for 8s. Reason: RUNNING
2024-07-08 17:51:55,355 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:52:04,774 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:52:14,424 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:52:24,846 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:52:35,257 Sleeping for 6s. Reason: RUNNING
2024-07-08 17:52:41,766 Sleeping for 8s. Reason: RUNNING
2024-07-08 17:52:51,216 Sleeping for 6s. Reason: RUNNING
2024-07-08 17:52:57,637 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:53:08,067 Sleeping for 6s. Reason: RUNNING
2024-07-08 17:53:14,483 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:53:25,071 Sleeping for 7s. Reason: RUNNING
2024-07-08 17:53:32,495 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:53:37,912 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:53:47,358 Sleeping for 7s. Reason: RUNNING
2024-07-08 17:53:54,759 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:54:05,375 Sleeping for 6s. Reason: RUNNING
2024-07-08 17:54:11,790 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:54:17,228 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:54:22,658 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:54:28,083 Sleeping for 6s. Reason: RUNNING
2024-07-08 17:54:34,493 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:54:39,912 Sleeping for 7s. Reason: RUNNING
2024-07-08 17:54:47,336 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:54:52,756 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:55:02,190 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:55:07,593 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:55:17,523 Sleeping for 6s. Reason: RUNNING
2024-07-08 17:55:23,944 Sleeping for 7s. Reason: RUNNING
2024-07-08 17:55:31,376 Sleeping for 6s. Reason: RUNNING
2024-07-08 17:55:37,786 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:55:48,571 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:55:58,013 Sleeping for 6s. Reason: RUNNING
2024-07-08 17:56:04,429 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:56:09,843 Sleeping for 8s. Reason: RUNNING
2024-07-08 17:56:18,419 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:56:27,845 Sleeping for 7s. Reason: RUNNING
2024-07-08 17:56:35,268 Sleeping for 6s. Reason: RUNNING
2024-07-08 17:56:41,693 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:56:47,108 Sleeping for 5s. Reason: RUNNING
2024-07-08 17:56:52,521 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:57:02,938 Sleeping for 8s. Reason: RUNNING
2024-07-08 17:57:11,355 Sleeping for 7s. Reason: RUNNING
2024-07-08 17:57:18,797 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:57:28,237 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:59:19,595 Sleeping for 10s. Reason: PENDING
2024-07-08 17:59:29,999 Sleeping for 10s. Reason: RUNNING
2024-07-08 17:59:40,423 Sleeping for 8s. Reason: RUNNING
2024-07-08 17:59:49,046 Sleeping for 9s. Reason: RUNNING
2024-07-08 17:59:58,464 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:00:06,940 Sleeping for 10s. Reason: RUNNING
2024-07-08 18:00:17,843 Sleeping for 7s. Reason: RUNNING
2024-07-08 18:00:25,261 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:00:33,690 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:00:43,265 Sleeping for 5s. Reason: RUNNING
2024-07-08 18:00:49,699 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:00:59,126 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:01:08,552 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:01:17,975 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:01:26,737 Sleeping for 6s. Reason: RUNNING
2024-07-08 18:01:34,317 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:01:42,750 Sleeping for 5s. Reason: RUNNING
2024-07-08 18:01:48,175 Sleeping for 5s. Reason: RUNNING
2024-07-08 18:01:53,586 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:02:02,032 Sleeping for 5s. Reason: RUNNING
2024-07-08 18:02:07,453 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:02:15,897 Sleeping for 6s. Reason: RUNNING
2024-07-08 18:02:22,332 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:02:30,754 Sleeping for 7s. Reason: RUNNING
2024-07-08 18:02:38,174 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:02:46,583 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:02:55,010 Sleeping for 5s. Reason: RUNNING
2024-07-08 18:03:00,443 Sleeping for 10s. Reason: RUNNING
2024-07-08 18:03:10,878 Sleeping for 6s. Reason: RUNNING
2024-07-08 18:03:17,292 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:03:26,718 Sleeping for 10s. Reason: RUNNING
2024-07-08 18:03:37,142 Sleeping for 7s. Reason: RUNNING
2024-07-08 18:03:44,556 Sleeping for 6s. Reason: RUNNING
2024-07-08 18:03:50,988 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:04:00,408 Sleeping for 10s. Reason: RUNNING
2024-07-08 18:04:10,839 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:04:19,247 Sleeping for 8s. Reason: RUNNING
2024-07-08 18:04:27,688 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:04:37,165 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:04:46,590 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:04:55,999 Sleeping for 5s. Reason: RUNNING
2024-07-08 18:05:01,402 Sleeping for 5s. Reason: RUNNING
2024-07-08 18:05:06,835 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:05:16,264 Sleeping for 7s. Reason: RUNNING
2024-07-08 18:05:23,665 Sleeping for 6s. Reason: RUNNING
2024-07-08 18:05:30,237 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:05:40,150 Sleeping for 6s. Reason: RUNNING
2024-07-08 18:05:46,574 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:05:56,006 Sleeping for 6s. Reason: RUNNING
2024-07-08 18:06:02,422 Sleeping for 10s. Reason: RUNNING
2024-07-08 18:06:13,060 Sleeping for 6s. Reason: RUNNING
2024-07-08 18:06:30,603 Setting max_seq=508, max_extra_seq=2048
2024-07-08 18:10:50,272 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.2 pTM=0.502 ipTM=0.182
2024-07-08 18:12:21,733 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.8 pTM=0.501 ipTM=0.18 tol=13.2
2024-07-08 18:13:53,343 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.6 pTM=0.474 ipTM=0.175 tol=8.84
2024-07-08 18:15:24,788 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.6 pTM=0.474 ipTM=0.177 tol=3.64
2024-07-08 18:16:56,234 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.8 pTM=0.483 ipTM=0.185 tol=6.24
2024-07-08 18:18:27,643 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64 pTM=0.489 ipTM=0.186 tol=2.26
2024-07-08 18:19:59,080 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64 pTM=0.485 ipTM=0.187 tol=1.68
2024-07-08 18:21:30,546 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.9 pTM=0.485 ipTM=0.187 tol=1.88
2024-07-08 18:23:01,996 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63.5 pTM=0.483 ipTM=0.186 tol=1.51
2024-07-08 18:24:33,403 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.6 pTM=0.481 ipTM=0.184 tol=1.26
2024-07-08 18:26:04,811 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.6 pTM=0.483 ipTM=0.188 tol=1.74
2024-07-08 18:27:36,188 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.6 pTM=0.483 ipTM=0.184 tol=3.36
2024-07-08 18:29:07,686 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.5 pTM=0.481 ipTM=0.186 tol=2.86
2024-07-08 18:30:39,082 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.6 pTM=0.482 ipTM=0.188 tol=1.5
2024-07-08 18:32:10,486 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.5 pTM=0.484 ipTM=0.192 tol=1.12
2024-07-08 18:33:41,920 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.6 pTM=0.482 ipTM=0.186 tol=1.15
2024-07-08 18:35:13,343 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.5 pTM=0.484 ipTM=0.187 tol=1.14
2024-07-08 18:36:44,771 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.7 pTM=0.484 ipTM=0.188 tol=1.14
2024-07-08 18:38:16,202 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.4 pTM=0.482 ipTM=0.187 tol=1.05
2024-07-08 18:39:47,726 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.5 pTM=0.483 ipTM=0.188 tol=1
2024-07-08 18:41:19,162 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.3 pTM=0.481 ipTM=0.189 tol=2.88
2024-07-08 18:42:50,612 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.8 pTM=0.487 ipTM=0.188 tol=3.1
2024-07-08 18:44:22,023 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.5 pTM=0.484 ipTM=0.187 tol=1.33
2024-07-08 18:45:53,412 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.8 pTM=0.488 ipTM=0.19 tol=1.42
2024-07-08 18:47:24,821 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.5 pTM=0.484 ipTM=0.187 tol=1.39
2024-07-08 18:48:56,339 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.7 pTM=0.49 ipTM=0.193 tol=1.38
2024-07-08 18:50:27,743 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.4 pTM=0.486 ipTM=0.194 tol=1.19
2024-07-08 18:51:59,142 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.7 pTM=0.486 ipTM=0.19 tol=1.5
2024-07-08 18:53:30,684 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.4 pTM=0.481 ipTM=0.184 tol=1.22
2024-07-08 18:55:02,098 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.5 pTM=0.482 ipTM=0.187 tol=1.23
2024-07-08 18:56:33,654 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.2 pTM=0.479 ipTM=0.184 tol=2.78
2024-07-08 18:56:33,656 alphafold2_multimer_v3_model_1_seed_000 took 2999.6s (30 recycles)
2024-07-08 18:58:06,709 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64 pTM=0.51 ipTM=0.183
2024-07-08 18:59:38,261 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64 pTM=0.5 ipTM=0.19 tol=8.77
2024-07-08 19:01:09,723 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.5 pTM=0.474 ipTM=0.186 tol=9.27
2024-07-08 19:02:41,167 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.8 pTM=0.477 ipTM=0.191 tol=4.76
2024-07-08 19:04:12,652 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.8 pTM=0.477 ipTM=0.192 tol=5.2
2024-07-08 19:05:44,295 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.9 pTM=0.471 ipTM=0.194 tol=4.54
2024-07-08 19:07:15,893 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.8 pTM=0.478 ipTM=0.19 tol=7.41
2024-07-08 19:08:47,339 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.7 pTM=0.477 ipTM=0.191 tol=2.92
2024-07-08 19:10:18,953 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.8 pTM=0.469 ipTM=0.193 tol=5.92
2024-07-08 19:11:50,414 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.6 pTM=0.464 ipTM=0.197 tol=2.07
2024-07-08 19:13:22,038 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.7 pTM=0.471 ipTM=0.198 tol=1.72
2024-07-08 19:14:53,512 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.6 pTM=0.469 ipTM=0.201 tol=1.35
2024-07-08 19:16:25,129 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.8 pTM=0.473 ipTM=0.196 tol=2.15
2024-07-08 19:17:56,583 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.5 pTM=0.467 ipTM=0.201 tol=1.97
2024-07-08 19:19:28,064 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.8 pTM=0.475 ipTM=0.202 tol=2.02
2024-07-08 19:20:59,540 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.7 pTM=0.467 ipTM=0.202 tol=1.54
2024-07-08 19:22:31,040 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.7 pTM=0.471 ipTM=0.196 tol=2.14
2024-07-08 19:24:02,519 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.8 pTM=0.47 ipTM=0.204 tol=1.98
2024-07-08 19:25:33,989 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.7 pTM=0.472 ipTM=0.198 tol=1.43
2024-07-08 19:27:05,433 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.6 pTM=0.468 ipTM=0.202 tol=2.05
2024-07-08 19:28:36,899 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.7 pTM=0.474 ipTM=0.196 tol=4.47
2024-07-08 19:30:08,357 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.8 pTM=0.481 ipTM=0.194 tol=2.57
2024-07-08 19:31:39,781 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.7 pTM=0.479 ipTM=0.192 tol=2.44
2024-07-08 19:33:11,216 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.7 pTM=0.474 ipTM=0.195 tol=5.95
2024-07-08 19:34:42,670 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.3 pTM=0.469 ipTM=0.196 tol=2.46
2024-07-08 19:36:14,098 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.6 pTM=0.484 ipTM=0.193 tol=5.82
2024-07-08 19:37:45,530 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.4 pTM=0.481 ipTM=0.191 tol=1.84
2024-07-08 19:39:17,116 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.4 pTM=0.469 ipTM=0.193 tol=5.89
2024-07-08 19:40:48,570 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.3 pTM=0.464 ipTM=0.197 tol=1.8
2024-07-08 19:42:19,986 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.3 pTM=0.47 ipTM=0.196 tol=1.2
2024-07-08 19:43:51,398 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.9 pTM=0.462 ipTM=0.199 tol=1.68
2024-07-08 19:43:51,400 alphafold2_multimer_v3_model_2_seed_000 took 2836.1s (30 recycles)
2024-07-08 19:45:24,718 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.7 pTM=0.439 ipTM=0.182
2024-07-08 19:46:56,371 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.7 pTM=0.444 ipTM=0.171 tol=14.9
2024-07-08 19:48:27,970 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.4 pTM=0.461 ipTM=0.18 tol=7.13
2024-07-08 19:49:59,727 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.8 pTM=0.469 ipTM=0.183 tol=4.21
2024-07-08 19:51:31,365 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.8 pTM=0.464 ipTM=0.184 tol=7.04
2024-07-08 19:53:02,963 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63 pTM=0.47 ipTM=0.185 tol=6.12
2024-07-08 19:54:34,570 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63 pTM=0.469 ipTM=0.185 tol=3.71
2024-07-08 19:56:06,127 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.9 pTM=0.47 ipTM=0.185 tol=2.96
2024-07-08 19:57:37,716 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63 pTM=0.472 ipTM=0.187 tol=2.46
2024-07-08 19:59:09,254 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.7 pTM=0.47 ipTM=0.189 tol=2.93
2024-07-08 20:00:40,842 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63 pTM=0.472 ipTM=0.191 tol=2.41
2024-07-08 20:02:12,418 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.9 pTM=0.471 ipTM=0.19 tol=2.7
2024-07-08 20:03:43,994 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.1 pTM=0.475 ipTM=0.191 tol=2.57
2024-07-08 20:05:15,573 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.8 pTM=0.471 ipTM=0.187 tol=1.92
2024-07-08 20:06:47,199 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63 pTM=0.471 ipTM=0.189 tol=3.23
2024-07-08 20:08:18,775 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.9 pTM=0.47 ipTM=0.184 tol=3.14
2024-07-08 20:09:50,541 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.8 pTM=0.47 ipTM=0.188 tol=2.46
2024-07-08 20:11:22,119 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.1 pTM=0.475 ipTM=0.192 tol=2.42
2024-07-08 20:12:53,724 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.2 pTM=0.479 ipTM=0.191 tol=1.96
2024-07-08 20:14:25,314 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.1 pTM=0.478 ipTM=0.188 tol=2.93
2024-07-08 20:15:56,906 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.6 pTM=0.487 ipTM=0.195 tol=2.73
2024-07-08 20:17:28,585 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.1 pTM=0.48 ipTM=0.19 tol=2.46
2024-07-08 20:19:00,323 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.9 pTM=0.474 ipTM=0.193 tol=4.15
2024-07-08 20:20:31,868 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.1 pTM=0.477 ipTM=0.191 tol=4.17
2024-07-08 20:22:03,453 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.2 pTM=0.48 ipTM=0.195 tol=4.43
2024-07-08 20:23:35,157 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63 pTM=0.479 ipTM=0.188 tol=4.82
2024-07-08 20:25:06,938 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.9 pTM=0.474 ipTM=0.188 tol=2.99
2024-07-08 20:26:38,629 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.1 pTM=0.477 ipTM=0.187 tol=2.48
2024-07-08 20:28:10,251 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.1 pTM=0.47 ipTM=0.184 tol=4.26
2024-07-08 20:29:41,856 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.9 pTM=0.471 ipTM=0.188 tol=3.92
2024-07-08 20:31:13,436 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.4 pTM=0.483 ipTM=0.192 tol=2.26
2024-07-08 20:31:13,438 alphafold2_multimer_v3_model_3_seed_000 took 2840.4s (30 recycles)
2024-07-08 20:32:46,751 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.1 pTM=0.525 ipTM=0.178
2024-07-08 20:34:18,466 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.9 pTM=0.521 ipTM=0.174 tol=11.7
2024-07-08 20:35:50,112 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.4 pTM=0.508 ipTM=0.184 tol=6.28
2024-07-08 20:37:21,791 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.2 pTM=0.505 ipTM=0.2 tol=3.54
2024-07-08 20:38:53,334 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.1 pTM=0.503 ipTM=0.21 tol=4.23
2024-07-08 20:40:25,032 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.1 pTM=0.503 ipTM=0.214 tol=2.45
2024-07-08 20:41:56,725 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.2 pTM=0.505 ipTM=0.23 tol=2.21
2024-07-08 20:43:28,247 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.7 pTM=0.502 ipTM=0.219 tol=1.89
2024-07-08 20:44:59,841 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.2 pTM=0.486 ipTM=0.225 tol=5.14
2024-07-08 20:46:31,380 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.8 pTM=0.501 ipTM=0.221 tol=4.3
2024-07-08 20:48:02,896 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.9 pTM=0.503 ipTM=0.226 tol=1.46
2024-07-08 20:49:34,587 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.1 pTM=0.506 ipTM=0.237 tol=1.65
2024-07-08 20:51:06,094 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.7 pTM=0.498 ipTM=0.23 tol=2.47
2024-07-08 20:52:37,656 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63 pTM=0.502 ipTM=0.236 tol=2.32
2024-07-08 20:54:09,203 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.9 pTM=0.504 ipTM=0.23 tol=1.56
2024-07-08 20:55:40,790 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.8 pTM=0.5 ipTM=0.239 tol=3.22
2024-07-08 20:57:12,341 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.9 pTM=0.507 ipTM=0.262 tol=1.74
2024-07-08 20:58:43,927 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63 pTM=0.507 ipTM=0.25 tol=1.33
2024-07-08 21:00:15,475 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.6 pTM=0.503 ipTM=0.239 tol=1.62
2024-07-08 21:01:47,072 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.7 pTM=0.487 ipTM=0.245 tol=8.31
2024-07-08 21:03:18,759 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.8 pTM=0.498 ipTM=0.254 tol=4.04
2024-07-08 21:04:50,317 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.2 pTM=0.501 ipTM=0.255 tol=2.28
2024-07-08 21:06:21,860 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63 pTM=0.501 ipTM=0.251 tol=1.72
2024-07-08 21:07:53,560 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.1 pTM=0.501 ipTM=0.241 tol=1.24
2024-07-08 21:09:25,318 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.9 pTM=0.501 ipTM=0.232 tol=1.16
2024-07-08 21:10:56,896 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.1 pTM=0.502 ipTM=0.24 tol=1.03
2024-07-08 21:12:28,442 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.1 pTM=0.502 ipTM=0.247 tol=1.88
2024-07-08 21:13:59,982 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.2 pTM=0.503 ipTM=0.23 tol=2.2
2024-07-08 21:15:31,559 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63 pTM=0.5 ipTM=0.215 tol=1.44
2024-07-08 21:17:03,274 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.9 pTM=0.499 ipTM=0.229 tol=2.17
2024-07-08 21:18:34,972 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63 pTM=0.5 ipTM=0.228 tol=1.94
2024-07-08 21:18:34,974 alphafold2_multimer_v3_model_4_seed_000 took 2839.9s (30 recycles)
2024-07-08 21:20:08,472 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.3 pTM=0.426 ipTM=0.162
2024-07-08 21:21:40,215 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62 pTM=0.482 ipTM=0.172 tol=11.5
2024-07-08 21:23:11,813 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.5 pTM=0.467 ipTM=0.175 tol=6.8
2024-07-08 21:24:43,429 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.2 pTM=0.479 ipTM=0.172 tol=3.99
2024-07-08 21:26:15,040 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.8 pTM=0.472 ipTM=0.172 tol=5.56
2024-07-08 21:27:46,595 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62 pTM=0.479 ipTM=0.173 tol=2.84
2024-07-08 21:29:18,173 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.7 pTM=0.474 ipTM=0.172 tol=2.78
2024-07-08 21:30:49,755 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.2 pTM=0.482 ipTM=0.173 tol=2.54
2024-07-08 21:32:21,332 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.478 ipTM=0.172 tol=3.36
2024-07-08 21:33:52,871 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.1 pTM=0.48 ipTM=0.173 tol=2.81
2024-07-08 21:35:24,565 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.1 pTM=0.482 ipTM=0.172 tol=3.27
2024-07-08 21:36:56,084 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.2 pTM=0.483 ipTM=0.173 tol=1.74
2024-07-08 21:38:27,797 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.9 pTM=0.478 ipTM=0.172 tol=1.5
2024-07-08 21:39:59,329 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.4 pTM=0.483 ipTM=0.173 tol=1.38
2024-07-08 21:41:31,023 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62 pTM=0.485 ipTM=0.173 tol=1.88
2024-07-08 21:43:02,562 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.9 pTM=0.482 ipTM=0.173 tol=3.21
2024-07-08 21:44:34,120 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.7 pTM=0.481 ipTM=0.173 tol=2.84
2024-07-08 21:46:05,668 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.2 pTM=0.484 ipTM=0.173 tol=1.85
2024-07-08 21:47:37,230 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.8 pTM=0.484 ipTM=0.174 tol=1.51
2024-07-08 21:49:08,919 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.2 pTM=0.484 ipTM=0.174 tol=1.45
2024-07-08 21:50:40,466 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62 pTM=0.482 ipTM=0.174 tol=1.58
2024-07-08 21:52:12,032 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.2 pTM=0.483 ipTM=0.174 tol=2.13
2024-07-08 21:53:43,587 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.8 pTM=0.484 ipTM=0.174 tol=2.1
2024-07-08 21:55:15,154 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.2 pTM=0.488 ipTM=0.173 tol=3.32
2024-07-08 21:56:46,728 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.8 pTM=0.484 ipTM=0.172 tol=3.04
2024-07-08 21:58:18,408 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62 pTM=0.487 ipTM=0.173 tol=2.9
2024-07-08 21:59:49,942 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.7 pTM=0.484 ipTM=0.173 tol=2.86
2024-07-08 22:01:21,465 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.2 pTM=0.486 ipTM=0.173 tol=2.85
2024-07-08 22:02:52,985 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.9 pTM=0.486 ipTM=0.171 tol=2.2
2024-07-08 22:04:24,572 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62 pTM=0.486 ipTM=0.172 tol=1.95
2024-07-08 22:05:56,168 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.9 pTM=0.486 ipTM=0.173 tol=1.64
2024-07-08 22:05:56,170 alphafold2_multimer_v3_model_5_seed_000 took 2839.6s (30 recycles)
2024-07-08 22:05:57,800 reranking models by 'multimer' metric
2024-07-08 22:06:01,896 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 22:08:39,288 Relaxation took 161.5s
2024-07-08 22:08:39,288 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63 pTM=0.5 ipTM=0.228
2024-07-08 22:12:04,723 Relaxation took 205.4s
2024-07-08 22:12:04,723 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.9 pTM=0.462 ipTM=0.199
2024-07-08 22:14:33,012 Relaxation took 148.3s
2024-07-08 22:14:33,012 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.4 pTM=0.483 ipTM=0.192
2024-07-08 22:17:17,351 Relaxation took 164.3s
2024-07-08 22:17:17,352 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.2 pTM=0.479 ipTM=0.184
2024-07-08 22:20:09,414 Relaxation took 172.1s
2024-07-08 22:20:09,415 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.9 pTM=0.486 ipTM=0.173
2024-07-08 22:20:14,512 Done