2024-07-08 18:21:31,793 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-08 18:21:32,108 Running on GPU 2024-07-08 18:21:35,727 Found 6 citations for tools or databases 2024-07-08 18:21:35,727 Query 1/1: BAAS2_TACO1 (length 402) 2024-07-08 18:21:36,179 Sleeping for 8s. Reason: PENDING 2024-07-08 18:21:44,620 Sleeping for 8s. Reason: RUNNING 2024-07-08 18:21:53,041 Sleeping for 5s. Reason: RUNNING 2024-07-08 18:21:58,476 Sleeping for 10s. Reason: RUNNING 2024-07-08 18:22:09,779 Sleeping for 5s. Reason: RUNNING 2024-07-08 18:22:15,186 Sleeping for 10s. Reason: RUNNING 2024-07-08 18:22:25,622 Sleeping for 7s. Reason: RUNNING 2024-07-08 18:22:33,034 Sleeping for 9s. Reason: RUNNING 2024-07-08 18:22:42,468 Sleeping for 6s. Reason: RUNNING 2024-07-08 18:22:52,182 Sleeping for 8s. Reason: PENDING 2024-07-08 18:23:00,621 Sleeping for 9s. Reason: RUNNING 2024-07-08 18:23:10,523 Sleeping for 5s. Reason: RUNNING 2024-07-08 18:23:15,937 Sleeping for 8s. Reason: RUNNING 2024-07-08 18:23:25,733 Setting max_seq=508, max_extra_seq=1546 2024-07-08 18:26:03,843 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59 pTM=0.549 ipTM=0.0997 2024-07-08 18:26:07,869 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.3 pTM=0.573 ipTM=0.159 tol=15.4 2024-07-08 18:26:11,886 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.1 pTM=0.575 ipTM=0.154 tol=7.7 2024-07-08 18:26:15,901 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.2 pTM=0.58 ipTM=0.178 tol=4.07 2024-07-08 18:26:19,914 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.3 pTM=0.581 ipTM=0.179 tol=1.39 2024-07-08 18:26:23,931 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.8 pTM=0.583 ipTM=0.184 tol=1.89 2024-07-08 18:26:27,948 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.7 pTM=0.582 ipTM=0.183 tol=1.08 2024-07-08 18:26:31,964 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.9 pTM=0.582 ipTM=0.179 tol=1.65 2024-07-08 18:26:35,982 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.8 pTM=0.582 ipTM=0.184 tol=1.81 2024-07-08 18:26:40,000 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.2 pTM=0.584 ipTM=0.184 tol=1.29 2024-07-08 18:26:44,019 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.3 pTM=0.583 ipTM=0.183 tol=0.803 2024-07-08 18:26:48,039 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.2 pTM=0.585 ipTM=0.189 tol=1.73 2024-07-08 18:26:52,058 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.3 pTM=0.584 ipTM=0.187 tol=0.797 2024-07-08 18:26:56,076 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.4 pTM=0.584 ipTM=0.187 tol=1.12 2024-07-08 18:27:00,095 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.1 pTM=0.584 ipTM=0.188 tol=2.53 2024-07-08 18:27:04,113 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.3 pTM=0.586 ipTM=0.192 tol=1.01 2024-07-08 18:27:08,130 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.4 pTM=0.588 ipTM=0.194 tol=1.3 2024-07-08 18:27:12,150 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.2 pTM=0.586 ipTM=0.197 tol=1.13 2024-07-08 18:27:16,166 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59 pTM=0.586 ipTM=0.199 tol=0.962 2024-07-08 18:27:20,180 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.9 pTM=0.587 ipTM=0.204 tol=1.23 2024-07-08 18:27:24,198 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59 pTM=0.586 ipTM=0.2 tol=1.31 2024-07-08 18:27:28,215 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.2 pTM=0.586 ipTM=0.197 tol=1.17 2024-07-08 18:27:32,235 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.2 pTM=0.589 ipTM=0.2 tol=2.72 2024-07-08 18:27:36,257 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59 pTM=0.591 ipTM=0.211 tol=0.825 2024-07-08 18:27:40,274 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59 pTM=0.586 ipTM=0.202 tol=1.16 2024-07-08 18:27:44,291 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59 pTM=0.587 ipTM=0.205 tol=1.23 2024-07-08 18:27:48,310 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.1 pTM=0.586 ipTM=0.202 tol=0.873 2024-07-08 18:27:52,347 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.3 pTM=0.588 ipTM=0.205 tol=0.943 2024-07-08 18:27:56,365 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.4 pTM=0.587 ipTM=0.198 tol=1.23 2024-07-08 18:28:00,385 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.2 pTM=0.587 ipTM=0.2 tol=0.93 2024-07-08 18:28:04,404 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59 pTM=0.586 ipTM=0.204 tol=0.874 2024-07-08 18:28:04,404 alphafold2_multimer_v3_model_1_seed_000 took 273.5s (30 recycles) 2024-07-08 18:28:08,570 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.7 pTM=0.562 ipTM=0.111 2024-07-08 18:28:12,608 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.8 pTM=0.579 ipTM=0.136 tol=15.4 2024-07-08 18:28:16,642 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.4 pTM=0.577 ipTM=0.138 tol=8.72 2024-07-08 18:28:20,669 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.2 pTM=0.578 ipTM=0.153 tol=4.04 2024-07-08 18:28:24,696 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.2 pTM=0.58 ipTM=0.161 tol=2.82 2024-07-08 18:28:28,721 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.4 pTM=0.583 ipTM=0.168 tol=2.89 2024-07-08 18:28:32,744 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.3 pTM=0.582 ipTM=0.171 tol=2.22 2024-07-08 18:28:36,768 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.7 pTM=0.584 ipTM=0.171 tol=1.42 2024-07-08 18:28:40,791 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.5 pTM=0.584 ipTM=0.177 tol=1.52 2024-07-08 18:28:44,815 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.5 pTM=0.586 ipTM=0.177 tol=1.71 2024-07-08 18:28:48,839 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.5 pTM=0.584 ipTM=0.176 tol=1.36 2024-07-08 18:28:52,862 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.7 pTM=0.587 ipTM=0.182 tol=1.79 2024-07-08 18:28:56,888 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.3 pTM=0.585 ipTM=0.179 tol=1.85 2024-07-08 18:29:00,913 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.8 pTM=0.586 ipTM=0.182 tol=1.59 2024-07-08 18:29:04,937 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.2 pTM=0.584 ipTM=0.18 tol=1.03 2024-07-08 18:29:08,961 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.9 pTM=0.587 ipTM=0.181 tol=1.11 2024-07-08 18:29:12,985 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.8 pTM=0.587 ipTM=0.18 tol=0.816 2024-07-08 18:29:17,009 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.7 pTM=0.586 ipTM=0.181 tol=1.01 2024-07-08 18:29:21,031 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.4 pTM=0.584 ipTM=0.18 tol=0.839 2024-07-08 18:29:25,051 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.4 pTM=0.585 ipTM=0.184 tol=1.08 2024-07-08 18:29:29,071 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.3 pTM=0.584 ipTM=0.181 tol=1.04 2024-07-08 18:29:33,094 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.8 pTM=0.585 ipTM=0.181 tol=0.929 2024-07-08 18:29:37,119 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.9 pTM=0.586 ipTM=0.182 tol=1.1 2024-07-08 18:29:41,141 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.9 pTM=0.59 ipTM=0.192 tol=0.658 2024-07-08 18:29:45,165 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.7 pTM=0.584 ipTM=0.179 tol=0.708 2024-07-08 18:29:49,188 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.5 pTM=0.587 ipTM=0.189 tol=1.1 2024-07-08 18:29:53,211 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.6 pTM=0.585 ipTM=0.184 tol=0.864 2024-07-08 18:29:57,235 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.9 pTM=0.586 ipTM=0.184 tol=1.14 2024-07-08 18:30:01,259 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59 pTM=0.584 ipTM=0.18 tol=1.25 2024-07-08 18:30:05,282 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.6 pTM=0.585 ipTM=0.184 tol=0.889 2024-07-08 18:30:09,304 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.4 pTM=0.584 ipTM=0.186 tol=1.35 2024-07-08 18:30:09,304 alphafold2_multimer_v3_model_2_seed_000 took 124.8s (30 recycles) 2024-07-08 18:30:13,463 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.3 pTM=0.532 ipTM=0.135 2024-07-08 18:30:17,485 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.8 pTM=0.544 ipTM=0.191 tol=6.02 2024-07-08 18:30:21,501 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.8 pTM=0.555 ipTM=0.214 tol=8.88 2024-07-08 18:30:25,513 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.4 pTM=0.553 ipTM=0.225 tol=2.77 2024-07-08 18:30:29,528 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.9 pTM=0.557 ipTM=0.236 tol=1.2 2024-07-08 18:30:33,542 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57 pTM=0.559 ipTM=0.242 tol=2.1 2024-07-08 18:30:37,559 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57 pTM=0.558 ipTM=0.243 tol=1.75 2024-07-08 18:30:41,578 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.4 pTM=0.562 ipTM=0.243 tol=2.13 2024-07-08 18:30:45,596 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.1 pTM=0.56 ipTM=0.246 tol=0.885 2024-07-08 18:30:49,609 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.2 pTM=0.561 ipTM=0.247 tol=2.95 2024-07-08 18:30:53,626 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.4 pTM=0.562 ipTM=0.246 tol=1.49 2024-07-08 18:30:57,645 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.4 pTM=0.563 ipTM=0.243 tol=2.74 2024-07-08 18:31:01,663 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.2 pTM=0.564 ipTM=0.247 tol=0.981 2024-07-08 18:31:05,676 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.6 pTM=0.565 ipTM=0.245 tol=1.52 2024-07-08 18:31:09,692 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.4 pTM=0.566 ipTM=0.249 tol=0.943 2024-07-08 18:31:13,709 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.6 pTM=0.568 ipTM=0.249 tol=1.52 2024-07-08 18:31:17,727 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.6 pTM=0.567 ipTM=0.245 tol=1.5 2024-07-08 18:31:21,743 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.4 pTM=0.563 ipTM=0.244 tol=1.6 2024-07-08 18:31:25,758 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.3 pTM=0.564 ipTM=0.248 tol=0.905 2024-07-08 18:31:29,775 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.3 pTM=0.565 ipTM=0.251 tol=1.14 2024-07-08 18:31:33,791 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.2 pTM=0.562 ipTM=0.248 tol=0.647 2024-07-08 18:31:37,807 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.3 pTM=0.562 ipTM=0.249 tol=1.59 2024-07-08 18:31:41,824 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.3 pTM=0.562 ipTM=0.251 tol=1.54 2024-07-08 18:31:45,841 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.6 pTM=0.564 ipTM=0.25 tol=1.44 2024-07-08 18:31:49,859 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.4 pTM=0.563 ipTM=0.248 tol=2.03 2024-07-08 18:31:53,875 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.1 pTM=0.56 ipTM=0.249 tol=1.58 2024-07-08 18:31:57,893 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.3 pTM=0.561 ipTM=0.248 tol=0.991 2024-07-08 18:32:01,910 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.6 pTM=0.565 ipTM=0.249 tol=1.33 2024-07-08 18:32:05,926 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.6 pTM=0.56 ipTM=0.242 tol=2.83 2024-07-08 18:32:09,945 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.6 pTM=0.564 ipTM=0.247 tol=2.86 2024-07-08 18:32:13,964 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.5 pTM=0.564 ipTM=0.249 tol=1.27 2024-07-08 18:32:13,965 alphafold2_multimer_v3_model_3_seed_000 took 124.5s (30 recycles) 2024-07-08 18:32:18,119 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.3 pTM=0.561 ipTM=0.146 2024-07-08 18:32:22,141 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.2 pTM=0.579 ipTM=0.191 tol=11.6 2024-07-08 18:32:26,156 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.6 pTM=0.578 ipTM=0.196 tol=5.04 2024-07-08 18:32:30,168 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.8 pTM=0.581 ipTM=0.21 tol=1.67 2024-07-08 18:32:34,180 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.1 pTM=0.586 ipTM=0.226 tol=1.91 2024-07-08 18:32:38,191 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.2 pTM=0.587 ipTM=0.234 tol=1.93 2024-07-08 18:32:42,202 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.5 pTM=0.589 ipTM=0.24 tol=1.55 2024-07-08 18:32:46,213 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.8 pTM=0.59 ipTM=0.239 tol=0.625 2024-07-08 18:32:50,225 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.7 pTM=0.592 ipTM=0.25 tol=1.46 2024-07-08 18:32:54,237 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.9 pTM=0.592 ipTM=0.25 tol=1.48 2024-07-08 18:32:58,249 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.1 pTM=0.595 ipTM=0.257 tol=1.12 2024-07-08 18:33:02,260 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.2 pTM=0.595 ipTM=0.258 tol=1.52 2024-07-08 18:33:06,272 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58 pTM=0.596 ipTM=0.261 tol=0.953 2024-07-08 18:33:10,284 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.2 pTM=0.593 ipTM=0.256 tol=1.2 2024-07-08 18:33:14,297 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.1 pTM=0.596 ipTM=0.262 tol=2.43 2024-07-08 18:33:18,308 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.2 pTM=0.594 ipTM=0.255 tol=1.02 2024-07-08 18:33:22,319 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.3 pTM=0.597 ipTM=0.261 tol=1.61 2024-07-08 18:33:26,328 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.2 pTM=0.595 ipTM=0.257 tol=1.17 2024-07-08 18:33:30,340 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.2 pTM=0.598 ipTM=0.265 tol=1.77 2024-07-08 18:33:34,350 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58 pTM=0.593 ipTM=0.258 tol=1.31 2024-07-08 18:33:38,360 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.9 pTM=0.595 ipTM=0.26 tol=0.961 2024-07-08 18:33:42,373 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.8 pTM=0.592 ipTM=0.253 tol=1.34 2024-07-08 18:33:46,385 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58 pTM=0.596 ipTM=0.263 tol=0.7 2024-07-08 18:33:50,396 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.2 pTM=0.595 ipTM=0.259 tol=0.932 2024-07-08 18:33:54,408 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.1 pTM=0.595 ipTM=0.26 tol=1.52 2024-07-08 18:33:58,419 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.8 pTM=0.593 ipTM=0.256 tol=1.37 2024-07-08 18:34:02,426 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58 pTM=0.595 ipTM=0.257 tol=1.78 2024-07-08 18:34:06,436 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58 pTM=0.593 ipTM=0.252 tol=0.705 2024-07-08 18:34:10,449 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.1 pTM=0.595 ipTM=0.254 tol=0.73 2024-07-08 18:34:14,462 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.1 pTM=0.595 ipTM=0.256 tol=0.953 2024-07-08 18:34:18,474 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.9 pTM=0.595 ipTM=0.259 tol=0.89 2024-07-08 18:34:18,475 alphafold2_multimer_v3_model_4_seed_000 took 124.4s (30 recycles) 2024-07-08 18:34:22,633 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.9 pTM=0.552 ipTM=0.129 2024-07-08 18:34:26,663 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.1 pTM=0.569 ipTM=0.152 tol=15.5 2024-07-08 18:34:30,691 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.9 pTM=0.573 ipTM=0.165 tol=4.83 2024-07-08 18:34:34,713 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.5 pTM=0.568 ipTM=0.173 tol=4.18 2024-07-08 18:34:38,733 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.8 pTM=0.574 ipTM=0.194 tol=4.35 2024-07-08 18:34:42,753 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.5 pTM=0.574 ipTM=0.196 tol=4.74 2024-07-08 18:34:46,773 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.6 pTM=0.575 ipTM=0.205 tol=7.13 2024-07-08 18:34:50,796 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57 pTM=0.578 ipTM=0.204 tol=1.63 2024-07-08 18:34:54,818 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.9 pTM=0.579 ipTM=0.219 tol=2.26 2024-07-08 18:34:58,839 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.6 pTM=0.575 ipTM=0.214 tol=4.59 2024-07-08 18:35:02,863 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.2 pTM=0.583 ipTM=0.236 tol=2.5 2024-07-08 18:35:06,885 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.9 pTM=0.58 ipTM=0.23 tol=2.1 2024-07-08 18:35:10,912 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57.4 pTM=0.59 ipTM=0.254 tol=2.42 2024-07-08 18:35:14,938 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=57.4 pTM=0.582 ipTM=0.233 tol=2.11 2024-07-08 18:35:18,966 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.6 pTM=0.591 ipTM=0.256 tol=1.12 2024-07-08 18:35:22,989 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57 pTM=0.583 ipTM=0.237 tol=2.01 2024-07-08 18:35:27,014 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.6 pTM=0.592 ipTM=0.257 tol=2.62 2024-07-08 18:35:31,036 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57 pTM=0.582 ipTM=0.236 tol=1.82 2024-07-08 18:35:35,061 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.6 pTM=0.592 ipTM=0.26 tol=2.44 2024-07-08 18:35:39,079 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.9 pTM=0.581 ipTM=0.237 tol=2.04 2024-07-08 18:35:43,104 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.4 pTM=0.589 ipTM=0.259 tol=1.48 2024-07-08 18:35:47,124 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.1 pTM=0.583 ipTM=0.239 tol=1.67 2024-07-08 18:35:51,149 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.4 pTM=0.592 ipTM=0.264 tol=2.56 2024-07-08 18:35:55,173 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.4 pTM=0.585 ipTM=0.241 tol=2.7 2024-07-08 18:35:59,200 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.6 pTM=0.591 ipTM=0.259 tol=3.86 2024-07-08 18:36:03,224 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.8 pTM=0.581 ipTM=0.239 tol=3.23 2024-07-08 18:36:07,248 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57.6 pTM=0.589 ipTM=0.258 tol=2.04 2024-07-08 18:36:11,272 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57 pTM=0.583 ipTM=0.238 tol=2.62 2024-07-08 18:36:15,299 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.6 pTM=0.589 ipTM=0.256 tol=2.49 2024-07-08 18:36:19,324 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57 pTM=0.582 ipTM=0.237 tol=2.24 2024-07-08 18:36:23,350 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.6 pTM=0.59 ipTM=0.261 tol=2.57 2024-07-08 18:36:23,350 alphafold2_multimer_v3_model_5_seed_000 took 124.8s (30 recycles) 2024-07-08 18:36:23,471 reranking models by 'multimer' metric 2024-07-08 18:36:24,361 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-08 18:36:50,598 Relaxation took 27.1s 2024-07-08 18:36:50,598 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.6 pTM=0.59 ipTM=0.261 2024-07-08 18:37:16,012 Relaxation took 25.4s 2024-07-08 18:37:16,012 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.9 pTM=0.595 ipTM=0.259 2024-07-08 18:37:40,659 Relaxation took 24.6s 2024-07-08 18:37:40,659 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.5 pTM=0.564 ipTM=0.249 2024-07-08 18:38:05,338 Relaxation took 24.7s 2024-07-08 18:38:05,338 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59 pTM=0.586 ipTM=0.204 2024-07-08 18:38:29,455 Relaxation took 24.1s 2024-07-08 18:38:29,455 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.4 pTM=0.584 ipTM=0.186 2024-07-08 18:38:30,432 Done