2024-07-08 18:23:10,918 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 18:23:11,213 Running on GPU
2024-07-08 18:23:11,980 Found 6 citations for tools or databases
2024-07-08 18:23:11,980 Query 1/1: BAGE3_CROL2 (length 396)
2024-07-08 18:23:12,387 Sleeping for 10s. Reason: PENDING
2024-07-08 18:23:22,798 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:23:32,216 Sleeping for 5s. Reason: RUNNING
2024-07-08 18:23:37,655 Sleeping for 9s. Reason: RUNNING
2024-07-08 18:23:48,156 Sleeping for 9s. Reason: PENDING
2024-07-08 18:23:57,576 Sleeping for 10s. Reason: RUNNING
2024-07-08 18:24:08,868 Setting max_seq=508, max_extra_seq=438
2024-07-08 18:26:25,436 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.5 pTM=0.311 ipTM=0.221
2024-07-08 18:26:29,228 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.8 pTM=0.31 ipTM=0.177 tol=4.53
2024-07-08 18:26:33,011 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.5 pTM=0.314 ipTM=0.199 tol=5.24
2024-07-08 18:26:36,792 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.6 pTM=0.316 ipTM=0.21 tol=2.28
2024-07-08 18:26:40,576 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.7 pTM=0.314 ipTM=0.201 tol=2.26
2024-07-08 18:26:44,354 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.2 pTM=0.315 ipTM=0.208 tol=2.16
2024-07-08 18:26:48,137 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57 pTM=0.317 ipTM=0.22 tol=3.67
2024-07-08 18:26:51,920 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.8 pTM=0.315 ipTM=0.206 tol=2.83
2024-07-08 18:26:55,705 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.9 pTM=0.313 ipTM=0.201 tol=4.63
2024-07-08 18:26:59,490 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.7 pTM=0.313 ipTM=0.195 tol=2.46
2024-07-08 18:27:03,276 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.2 pTM=0.311 ipTM=0.192 tol=2.88
2024-07-08 18:27:07,061 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.9 pTM=0.312 ipTM=0.197 tol=1.73
2024-07-08 18:27:10,848 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.8 pTM=0.312 ipTM=0.194 tol=2.76
2024-07-08 18:27:14,634 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.1 pTM=0.314 ipTM=0.208 tol=2.33
2024-07-08 18:27:18,420 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.8 pTM=0.313 ipTM=0.2 tol=2.6
2024-07-08 18:27:22,206 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.1 pTM=0.313 ipTM=0.201 tol=2.71
2024-07-08 18:27:25,993 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.4 pTM=0.312 ipTM=0.197 tol=3.66
2024-07-08 18:27:29,782 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.8 pTM=0.311 ipTM=0.194 tol=2.58
2024-07-08 18:27:33,572 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.4 pTM=0.31 ipTM=0.19 tol=3.39
2024-07-08 18:27:37,360 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.7 pTM=0.31 ipTM=0.195 tol=2.32
2024-07-08 18:27:41,150 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56 pTM=0.312 ipTM=0.195 tol=3.32
2024-07-08 18:27:44,937 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.3 pTM=0.307 ipTM=0.192 tol=4.57
2024-07-08 18:27:48,725 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.7 pTM=0.309 ipTM=0.187 tol=4.52
2024-07-08 18:27:52,509 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.6 pTM=0.307 ipTM=0.195 tol=2.8
2024-07-08 18:27:56,290 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.5 pTM=0.31 ipTM=0.188 tol=2.2
2024-07-08 18:28:00,079 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.3 pTM=0.314 ipTM=0.199 tol=2.48
2024-07-08 18:28:03,862 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.1 pTM=0.308 ipTM=0.188 tol=2.88
2024-07-08 18:28:07,652 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.1 pTM=0.31 ipTM=0.191 tol=2.65
2024-07-08 18:28:11,439 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.3 pTM=0.309 ipTM=0.19 tol=2.98
2024-07-08 18:28:15,228 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.4 pTM=0.315 ipTM=0.204 tol=2.48
2024-07-08 18:28:19,015 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.9 pTM=0.312 ipTM=0.192 tol=2.52
2024-07-08 18:28:19,015 alphafold2_multimer_v3_model_1_seed_000 took 244.9s (30 recycles)
2024-07-08 18:28:22,916 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.6 pTM=0.307 ipTM=0.16
2024-07-08 18:28:26,701 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.1 pTM=0.312 ipTM=0.157 tol=6.8
2024-07-08 18:28:30,482 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53 pTM=0.313 ipTM=0.167 tol=3.36
2024-07-08 18:28:34,265 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.3 pTM=0.308 ipTM=0.149 tol=2.12
2024-07-08 18:28:38,046 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.6 pTM=0.308 ipTM=0.152 tol=1.95
2024-07-08 18:28:41,826 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.6 pTM=0.305 ipTM=0.14 tol=3.29
2024-07-08 18:28:45,607 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.6 pTM=0.307 ipTM=0.155 tol=1.61
2024-07-08 18:28:49,396 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.8 pTM=0.299 ipTM=0.131 tol=3.03
2024-07-08 18:28:53,179 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.7 pTM=0.297 ipTM=0.132 tol=2.38
2024-07-08 18:28:56,966 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.8 pTM=0.302 ipTM=0.135 tol=1.46
2024-07-08 18:29:00,750 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.4 pTM=0.293 ipTM=0.123 tol=2.93
2024-07-08 18:29:04,538 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.7 pTM=0.292 ipTM=0.117 tol=3.07
2024-07-08 18:29:08,324 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.6 pTM=0.289 ipTM=0.116 tol=2.78
2024-07-08 18:29:12,110 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.4 pTM=0.296 ipTM=0.128 tol=2.61
2024-07-08 18:29:15,895 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.8 pTM=0.292 ipTM=0.124 tol=5.43
2024-07-08 18:29:19,681 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.2 pTM=0.298 ipTM=0.136 tol=6.25
2024-07-08 18:29:23,465 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.2 pTM=0.305 ipTM=0.159 tol=5.04
2024-07-08 18:29:27,251 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.2 pTM=0.303 ipTM=0.149 tol=2.05
2024-07-08 18:29:31,032 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.5 pTM=0.31 ipTM=0.168 tol=3.17
2024-07-08 18:29:34,812 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.4 pTM=0.305 ipTM=0.151 tol=4.71
2024-07-08 18:29:38,597 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.7 pTM=0.297 ipTM=0.142 tol=2.26
2024-07-08 18:29:42,385 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.7 pTM=0.301 ipTM=0.143 tol=2.47
2024-07-08 18:29:46,168 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53.1 pTM=0.299 ipTM=0.143 tol=2.49
2024-07-08 18:29:49,954 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53 pTM=0.3 ipTM=0.156 tol=1.78
2024-07-08 18:29:53,740 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.2 pTM=0.299 ipTM=0.136 tol=4.47
2024-07-08 18:29:57,525 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.6 pTM=0.297 ipTM=0.133 tol=4.67
2024-07-08 18:30:01,310 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.3 pTM=0.295 ipTM=0.15 tol=2.46
2024-07-08 18:30:05,099 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.7 pTM=0.296 ipTM=0.139 tol=4.95
2024-07-08 18:30:08,883 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.6 pTM=0.294 ipTM=0.154 tol=1.91
2024-07-08 18:30:12,667 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.3 pTM=0.293 ipTM=0.14 tol=6.57
2024-07-08 18:30:16,451 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.3 pTM=0.291 ipTM=0.141 tol=2.12
2024-07-08 18:30:16,452 alphafold2_multimer_v3_model_2_seed_000 took 117.3s (30 recycles)
2024-07-08 18:30:20,376 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.6 pTM=0.31 ipTM=0.213
2024-07-08 18:30:24,167 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.8 pTM=0.306 ipTM=0.18 tol=8.88
2024-07-08 18:30:27,958 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.7 pTM=0.305 ipTM=0.178 tol=7.87
2024-07-08 18:30:31,755 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.8 pTM=0.306 ipTM=0.183 tol=4.98
2024-07-08 18:30:35,552 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.4 pTM=0.305 ipTM=0.192 tol=5.2
2024-07-08 18:30:39,348 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.3 pTM=0.304 ipTM=0.18 tol=6.76
2024-07-08 18:30:43,139 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55.2 pTM=0.308 ipTM=0.219 tol=5.21
2024-07-08 18:30:46,930 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55 pTM=0.31 ipTM=0.23 tol=4.01
2024-07-08 18:30:50,723 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55.5 pTM=0.314 ipTM=0.275 tol=5.2
2024-07-08 18:30:54,518 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.9 pTM=0.332 ipTM=0.346 tol=4.04
2024-07-08 18:30:58,308 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.8 pTM=0.349 ipTM=0.416 tol=3.76
2024-07-08 18:31:02,101 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.6 pTM=0.348 ipTM=0.412 tol=4.73
2024-07-08 18:31:05,888 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.2 pTM=0.361 ipTM=0.446 tol=2.01
2024-07-08 18:31:09,678 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60 pTM=0.361 ipTM=0.466 tol=2.26
2024-07-08 18:31:13,470 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.7 pTM=0.358 ipTM=0.457 tol=2.43
2024-07-08 18:31:17,262 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.8 pTM=0.368 ipTM=0.496 tol=1.72
2024-07-08 18:31:21,055 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.6 pTM=0.363 ipTM=0.466 tol=1.16
2024-07-08 18:31:24,847 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.1 pTM=0.367 ipTM=0.49 tol=1.47
2024-07-08 18:31:28,634 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.2 pTM=0.361 ipTM=0.477 tol=4.05
2024-07-08 18:31:32,425 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.3 pTM=0.364 ipTM=0.472 tol=2.09
2024-07-08 18:31:36,215 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.5 pTM=0.383 ipTM=0.534 tol=1.79
2024-07-08 18:31:40,002 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.9 pTM=0.365 ipTM=0.49 tol=1.43
2024-07-08 18:31:43,791 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.8 pTM=0.366 ipTM=0.497 tol=1.82
2024-07-08 18:31:47,580 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.6 pTM=0.374 ipTM=0.507 tol=2.57
2024-07-08 18:31:51,372 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.2 pTM=0.375 ipTM=0.516 tol=1.85
2024-07-08 18:31:55,164 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.6 pTM=0.368 ipTM=0.489 tol=2.13
2024-07-08 18:31:58,955 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.4 pTM=0.375 ipTM=0.528 tol=1.31
2024-07-08 18:32:02,747 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.2 pTM=0.37 ipTM=0.502 tol=1.8
2024-07-08 18:32:06,538 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62 pTM=0.384 ipTM=0.555 tol=2.35
2024-07-08 18:32:10,327 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.1 pTM=0.374 ipTM=0.521 tol=2.15
2024-07-08 18:32:14,114 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.9 pTM=0.376 ipTM=0.518 tol=6.67
2024-07-08 18:32:14,114 alphafold2_multimer_v3_model_3_seed_000 took 117.5s (30 recycles)
2024-07-08 18:32:18,026 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53.2 pTM=0.313 ipTM=0.218
2024-07-08 18:32:21,814 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.7 pTM=0.299 ipTM=0.16 tol=9.05
2024-07-08 18:32:25,603 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=54.6 pTM=0.292 ipTM=0.14 tol=5.69
2024-07-08 18:32:29,390 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.4 pTM=0.292 ipTM=0.143 tol=5.55
2024-07-08 18:32:33,178 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.4 pTM=0.291 ipTM=0.142 tol=3.41
2024-07-08 18:32:36,972 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.6 pTM=0.283 ipTM=0.111 tol=3.71
2024-07-08 18:32:40,762 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.4 pTM=0.287 ipTM=0.133 tol=2.81
2024-07-08 18:32:44,554 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.5 pTM=0.288 ipTM=0.131 tol=2.5
2024-07-08 18:32:48,344 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.2 pTM=0.292 ipTM=0.143 tol=4.25
2024-07-08 18:32:52,127 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.3 pTM=0.294 ipTM=0.147 tol=4.84
2024-07-08 18:32:55,912 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.3 pTM=0.294 ipTM=0.152 tol=2.95
2024-07-08 18:32:59,700 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.4 pTM=0.291 ipTM=0.139 tol=3.98
2024-07-08 18:33:03,483 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.9 pTM=0.285 ipTM=0.116 tol=3.67
2024-07-08 18:33:07,273 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.7 pTM=0.291 ipTM=0.14 tol=2.97
2024-07-08 18:33:11,059 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.3 pTM=0.291 ipTM=0.142 tol=3.3
2024-07-08 18:33:14,846 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.6 pTM=0.296 ipTM=0.154 tol=2.05
2024-07-08 18:33:18,630 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.7 pTM=0.294 ipTM=0.142 tol=3.01
2024-07-08 18:33:22,417 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.7 pTM=0.29 ipTM=0.135 tol=1.41
2024-07-08 18:33:26,204 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.5 pTM=0.292 ipTM=0.139 tol=1.77
2024-07-08 18:33:29,992 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54.1 pTM=0.292 ipTM=0.131 tol=2.06
2024-07-08 18:33:33,780 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.8 pTM=0.294 ipTM=0.137 tol=2.41
2024-07-08 18:33:37,568 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.8 pTM=0.292 ipTM=0.138 tol=2.38
2024-07-08 18:33:41,354 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.3 pTM=0.294 ipTM=0.147 tol=3.84
2024-07-08 18:33:45,143 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.9 pTM=0.289 ipTM=0.124 tol=3.64
2024-07-08 18:33:48,934 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.7 pTM=0.287 ipTM=0.115 tol=2.06
2024-07-08 18:33:52,724 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.8 pTM=0.29 ipTM=0.122 tol=2.11
2024-07-08 18:33:56,517 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.7 pTM=0.292 ipTM=0.134 tol=1.58
2024-07-08 18:34:00,308 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.8 pTM=0.288 ipTM=0.118 tol=2.06
2024-07-08 18:34:04,099 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.8 pTM=0.287 ipTM=0.12 tol=4.15
2024-07-08 18:34:07,889 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=54.5 pTM=0.29 ipTM=0.123 tol=4.61
2024-07-08 18:34:11,679 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54 pTM=0.286 ipTM=0.113 tol=4.68
2024-07-08 18:34:11,679 alphafold2_multimer_v3_model_4_seed_000 took 117.4s (30 recycles)
2024-07-08 18:34:15,597 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.3 pTM=0.314 ipTM=0.177
2024-07-08 18:34:19,392 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.7 pTM=0.332 ipTM=0.245 tol=8.3
2024-07-08 18:34:23,186 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.3 pTM=0.326 ipTM=0.238 tol=5.62
2024-07-08 18:34:26,980 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.4 pTM=0.329 ipTM=0.24 tol=6.75
2024-07-08 18:34:30,776 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.2 pTM=0.331 ipTM=0.254 tol=6.14
2024-07-08 18:34:34,570 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.9 pTM=0.326 ipTM=0.241 tol=5.42
2024-07-08 18:34:38,368 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.8 pTM=0.323 ipTM=0.237 tol=4.86
2024-07-08 18:34:42,162 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.3 pTM=0.331 ipTM=0.257 tol=3.5
2024-07-08 18:34:45,956 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.4 pTM=0.33 ipTM=0.253 tol=2.03
2024-07-08 18:34:49,753 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.1 pTM=0.332 ipTM=0.26 tol=3.85
2024-07-08 18:34:53,548 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55 pTM=0.338 ipTM=0.292 tol=3.14
2024-07-08 18:34:57,346 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.4 pTM=0.334 ipTM=0.278 tol=3.27
2024-07-08 18:35:01,141 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.2 pTM=0.34 ipTM=0.305 tol=2.75
2024-07-08 18:35:04,933 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.8 pTM=0.333 ipTM=0.293 tol=2.81
2024-07-08 18:35:08,727 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.8 pTM=0.34 ipTM=0.315 tol=2.26
2024-07-08 18:35:12,524 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.5 pTM=0.332 ipTM=0.284 tol=3.04
2024-07-08 18:35:16,323 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.4 pTM=0.344 ipTM=0.324 tol=2.36
2024-07-08 18:35:20,117 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.9 pTM=0.329 ipTM=0.274 tol=3.84
2024-07-08 18:35:23,915 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56 pTM=0.337 ipTM=0.288 tol=5.27
2024-07-08 18:35:27,708 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.9 pTM=0.328 ipTM=0.26 tol=7.46
2024-07-08 18:35:31,503 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.2 pTM=0.34 ipTM=0.295 tol=3.51
2024-07-08 18:35:35,299 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.5 pTM=0.325 ipTM=0.26 tol=3.48
2024-07-08 18:35:39,093 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.1 pTM=0.335 ipTM=0.28 tol=5.42
2024-07-08 18:35:42,884 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.3 pTM=0.347 ipTM=0.337 tol=5.02
2024-07-08 18:35:46,679 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.3 pTM=0.349 ipTM=0.351 tol=3.51
2024-07-08 18:35:50,474 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.8 pTM=0.351 ipTM=0.355 tol=6.58
2024-07-08 18:35:54,269 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.6 pTM=0.345 ipTM=0.348 tol=7.57
2024-07-08 18:35:58,060 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55 pTM=0.34 ipTM=0.304 tol=2.86
2024-07-08 18:36:01,851 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55.8 pTM=0.348 ipTM=0.334 tol=6.88
2024-07-08 18:36:05,647 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.7 pTM=0.348 ipTM=0.339 tol=4.56
2024-07-08 18:36:09,441 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56 pTM=0.343 ipTM=0.325 tol=3.06
2024-07-08 18:36:09,442 alphafold2_multimer_v3_model_5_seed_000 took 117.6s (30 recycles)
2024-07-08 18:36:09,558 reranking models by 'multimer' metric
2024-07-08 18:36:12,523 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 18:36:34,275 Relaxation took 24.7s
2024-07-08 18:36:34,276 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.9 pTM=0.376 ipTM=0.518
2024-07-08 18:36:52,449 Relaxation took 18.2s
2024-07-08 18:36:52,449 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56 pTM=0.343 ipTM=0.325
2024-07-08 18:37:04,740 Relaxation took 12.3s
2024-07-08 18:37:04,741 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.9 pTM=0.312 ipTM=0.192
2024-07-08 18:37:23,853 Relaxation took 19.1s
2024-07-08 18:37:23,853 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.3 pTM=0.291 ipTM=0.141
2024-07-08 18:37:35,968 Relaxation took 12.1s
2024-07-08 18:37:35,968 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54 pTM=0.286 ipTM=0.113
2024-07-08 18:37:36,848 Done