2024-07-08 19:30:58,408 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 19:30:58,732 Running on GPU
2024-07-08 19:31:02,620 Found 6 citations for tools or databases
2024-07-08 19:31:02,620 Query 1/1: BNIP3_TDG (length 604)
2024-07-08 19:31:03,106 Sleeping for 5s. Reason: PENDING
2024-07-08 19:31:08,519 Sleeping for 9s. Reason: RUNNING
2024-07-08 19:31:17,959 Sleeping for 10s. Reason: RUNNING
2024-07-08 19:31:28,383 Sleeping for 9s. Reason: RUNNING
2024-07-08 19:31:37,805 Sleeping for 10s. Reason: RUNNING
2024-07-08 19:31:48,221 Sleeping for 6s. Reason: RUNNING
2024-07-08 19:31:54,635 Sleeping for 9s. Reason: RUNNING
2024-07-08 19:32:04,067 Sleeping for 10s. Reason: RUNNING
2024-07-08 19:32:22,040 Sleeping for 6s. Reason: PENDING
2024-07-08 19:32:28,464 Sleeping for 5s. Reason: RUNNING
2024-07-08 19:32:33,870 Sleeping for 9s. Reason: RUNNING
2024-07-08 19:32:43,304 Sleeping for 10s. Reason: RUNNING
2024-07-08 19:32:56,151 Setting max_seq=508, max_extra_seq=2048
2024-07-08 19:35:11,575 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46 pTM=0.426 ipTM=0.204
2024-07-08 19:35:19,183 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.9 pTM=0.41 ipTM=0.156 tol=11.7
2024-07-08 19:35:26,802 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46.6 pTM=0.411 ipTM=0.169 tol=7.95
2024-07-08 19:35:34,425 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.8 pTM=0.41 ipTM=0.158 tol=5.66
2024-07-08 19:35:42,057 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47 pTM=0.412 ipTM=0.154 tol=6.34
2024-07-08 19:35:49,681 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.3 pTM=0.407 ipTM=0.157 tol=5.23
2024-07-08 19:35:57,322 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.3 pTM=0.405 ipTM=0.153 tol=2.74
2024-07-08 19:36:04,968 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.5 pTM=0.406 ipTM=0.164 tol=3.03
2024-07-08 19:36:12,621 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=46.6 pTM=0.405 ipTM=0.161 tol=2.04
2024-07-08 19:36:20,274 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=46.4 pTM=0.408 ipTM=0.17 tol=1.88
2024-07-08 19:36:27,933 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.6 pTM=0.408 ipTM=0.169 tol=2.73
2024-07-08 19:36:35,606 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=46.7 pTM=0.41 ipTM=0.175 tol=2
2024-07-08 19:36:43,272 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=46.6 pTM=0.406 ipTM=0.165 tol=1.2
2024-07-08 19:36:50,935 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=46.5 pTM=0.407 ipTM=0.171 tol=1.58
2024-07-08 19:36:58,596 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.5 pTM=0.408 ipTM=0.172 tol=1.42
2024-07-08 19:37:06,272 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.8 pTM=0.41 ipTM=0.177 tol=1.75
2024-07-08 19:37:13,947 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.7 pTM=0.406 ipTM=0.167 tol=1.84
2024-07-08 19:37:21,622 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.8 pTM=0.41 ipTM=0.176 tol=1.96
2024-07-08 19:37:29,298 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46.6 pTM=0.407 ipTM=0.167 tol=1.64
2024-07-08 19:37:36,971 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.5 pTM=0.411 ipTM=0.18 tol=1.6
2024-07-08 19:37:44,650 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=46.7 pTM=0.407 ipTM=0.167 tol=2.03
2024-07-08 19:37:52,328 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.7 pTM=0.411 ipTM=0.178 tol=1.57
2024-07-08 19:38:00,003 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.6 pTM=0.406 ipTM=0.166 tol=1.49
2024-07-08 19:38:07,685 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47 pTM=0.409 ipTM=0.174 tol=2.08
2024-07-08 19:38:15,361 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46.7 pTM=0.407 ipTM=0.168 tol=1.52
2024-07-08 19:38:23,034 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.7 pTM=0.41 ipTM=0.177 tol=2.21
2024-07-08 19:38:30,715 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.6 pTM=0.408 ipTM=0.17 tol=1.49
2024-07-08 19:38:38,390 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.7 pTM=0.41 ipTM=0.177 tol=1.64
2024-07-08 19:38:46,072 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46.6 pTM=0.408 ipTM=0.172 tol=1.85
2024-07-08 19:38:53,751 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=46.6 pTM=0.41 ipTM=0.176 tol=1.93
2024-07-08 19:39:01,431 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=46 pTM=0.407 ipTM=0.172 tol=5.01
2024-07-08 19:39:01,431 alphafold2_multimer_v3_model_1_seed_000 took 359.9s (30 recycles)
2024-07-08 19:39:09,354 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.2 pTM=0.405 ipTM=0.149
2024-07-08 19:39:17,044 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=47.7 pTM=0.4 ipTM=0.143 tol=12.1
2024-07-08 19:39:24,741 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.2 pTM=0.398 ipTM=0.135 tol=5.5
2024-07-08 19:39:32,440 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.1 pTM=0.398 ipTM=0.13 tol=5.55
2024-07-08 19:39:40,135 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.9 pTM=0.402 ipTM=0.136 tol=3.34
2024-07-08 19:39:47,832 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.9 pTM=0.401 ipTM=0.133 tol=3.29
2024-07-08 19:39:55,533 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.6 pTM=0.401 ipTM=0.137 tol=10.2
2024-07-08 19:40:03,225 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47.6 pTM=0.404 ipTM=0.143 tol=5.73
2024-07-08 19:40:10,920 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.6 pTM=0.405 ipTM=0.144 tol=4.02
2024-07-08 19:40:18,620 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.5 pTM=0.401 ipTM=0.135 tol=5.12
2024-07-08 19:40:26,324 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.8 pTM=0.401 ipTM=0.134 tol=4
2024-07-08 19:40:34,021 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.9 pTM=0.4 ipTM=0.133 tol=3.03
2024-07-08 19:40:41,715 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.7 pTM=0.399 ipTM=0.131 tol=3.2
2024-07-08 19:40:49,414 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48 pTM=0.4 ipTM=0.13 tol=2.6
2024-07-08 19:40:57,110 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.7 pTM=0.401 ipTM=0.133 tol=2.07
2024-07-08 19:41:04,812 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.1 pTM=0.401 ipTM=0.132 tol=2.07
2024-07-08 19:41:12,504 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.1 pTM=0.402 ipTM=0.131 tol=2.91
2024-07-08 19:41:20,202 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48 pTM=0.402 ipTM=0.137 tol=2.08
2024-07-08 19:41:27,901 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48 pTM=0.401 ipTM=0.135 tol=3.03
2024-07-08 19:41:35,587 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.9 pTM=0.401 ipTM=0.137 tol=2.59
2024-07-08 19:41:43,285 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.1 pTM=0.401 ipTM=0.135 tol=1.37
2024-07-08 19:41:50,986 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.1 pTM=0.402 ipTM=0.137 tol=2.72
2024-07-08 19:41:58,682 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.9 pTM=0.401 ipTM=0.136 tol=1.68
2024-07-08 19:42:06,382 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.2 pTM=0.403 ipTM=0.136 tol=1.52
2024-07-08 19:42:14,076 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.1 pTM=0.403 ipTM=0.135 tol=3.18
2024-07-08 19:42:21,777 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.8 pTM=0.403 ipTM=0.134 tol=2.32
2024-07-08 19:42:29,475 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48 pTM=0.401 ipTM=0.131 tol=2.56
2024-07-08 19:42:37,170 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.1 pTM=0.412 ipTM=0.137 tol=5.5
2024-07-08 19:42:44,868 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.9 pTM=0.408 ipTM=0.138 tol=4
2024-07-08 19:42:52,556 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.6 pTM=0.406 ipTM=0.134 tol=4.43
2024-07-08 19:43:00,248 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.6 pTM=0.404 ipTM=0.143 tol=2.67
2024-07-08 19:43:00,249 alphafold2_multimer_v3_model_2_seed_000 took 238.6s (30 recycles)
2024-07-08 19:43:08,207 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46.2 pTM=0.414 ipTM=0.175
2024-07-08 19:43:15,935 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.4 pTM=0.416 ipTM=0.17 tol=10.8
2024-07-08 19:43:23,660 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46.9 pTM=0.408 ipTM=0.144 tol=7.79
2024-07-08 19:43:31,388 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.3 pTM=0.414 ipTM=0.174 tol=5.41
2024-07-08 19:43:39,121 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47 pTM=0.409 ipTM=0.156 tol=4.11
2024-07-08 19:43:46,851 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.1 pTM=0.413 ipTM=0.161 tol=4.07
2024-07-08 19:43:54,580 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.1 pTM=0.413 ipTM=0.159 tol=4.18
2024-07-08 19:44:02,308 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.1 pTM=0.413 ipTM=0.162 tol=2.27
2024-07-08 19:44:10,039 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.2 pTM=0.41 ipTM=0.156 tol=3.37
2024-07-08 19:44:17,767 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.1 pTM=0.412 ipTM=0.159 tol=2.57
2024-07-08 19:44:25,493 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.2 pTM=0.412 ipTM=0.16 tol=2.81
2024-07-08 19:44:33,221 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.1 pTM=0.41 ipTM=0.151 tol=4.65
2024-07-08 19:44:40,952 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=46.9 pTM=0.409 ipTM=0.151 tol=4.11
2024-07-08 19:44:48,684 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47 pTM=0.407 ipTM=0.145 tol=2.67
2024-07-08 19:44:56,410 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47 pTM=0.411 ipTM=0.156 tol=3.09
2024-07-08 19:45:04,140 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=46.8 pTM=0.406 ipTM=0.144 tol=3.13
2024-07-08 19:45:11,869 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47 pTM=0.409 ipTM=0.154 tol=5.03
2024-07-08 19:45:19,594 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=46.9 pTM=0.406 ipTM=0.146 tol=4.23
2024-07-08 19:45:27,316 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47 pTM=0.412 ipTM=0.162 tol=3.02
2024-07-08 19:45:35,050 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=46.8 pTM=0.409 ipTM=0.153 tol=3.82
2024-07-08 19:45:42,779 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47 pTM=0.413 ipTM=0.163 tol=3.26
2024-07-08 19:45:50,507 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=46.8 pTM=0.411 ipTM=0.158 tol=2.88
2024-07-08 19:45:58,227 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=46.8 pTM=0.41 ipTM=0.159 tol=3.79
2024-07-08 19:46:05,950 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.1 pTM=0.412 ipTM=0.161 tol=2.98
2024-07-08 19:46:13,680 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.2 pTM=0.412 ipTM=0.154 tol=4.98
2024-07-08 19:46:21,409 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47 pTM=0.412 ipTM=0.163 tol=4.67
2024-07-08 19:46:29,138 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.9 pTM=0.41 ipTM=0.155 tol=9.32
2024-07-08 19:46:36,865 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46.9 pTM=0.411 ipTM=0.155 tol=8.64
2024-07-08 19:46:44,593 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46.8 pTM=0.41 ipTM=0.204 tol=9.71
2024-07-08 19:46:52,319 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46.7 pTM=0.41 ipTM=0.156 tol=8.97
2024-07-08 19:47:00,051 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=46.6 pTM=0.407 ipTM=0.15 tol=7.79
2024-07-08 19:47:00,052 alphafold2_multimer_v3_model_3_seed_000 took 239.6s (30 recycles)
2024-07-08 19:47:08,026 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.7 pTM=0.408 ipTM=0.178
2024-07-08 19:47:15,758 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.9 pTM=0.425 ipTM=0.183 tol=15.1
2024-07-08 19:47:23,479 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.1 pTM=0.419 ipTM=0.163 tol=11.1
2024-07-08 19:47:31,198 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.8 pTM=0.42 ipTM=0.167 tol=5.94
2024-07-08 19:47:38,916 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.6 pTM=0.417 ipTM=0.149 tol=3.38
2024-07-08 19:47:46,634 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.5 pTM=0.415 ipTM=0.149 tol=2.48
2024-07-08 19:47:54,349 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47.4 pTM=0.414 ipTM=0.144 tol=7.53
2024-07-08 19:48:02,064 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.4 pTM=0.411 ipTM=0.148 tol=3.27
2024-07-08 19:48:09,782 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=47.3 pTM=0.415 ipTM=0.158 tol=2.61
2024-07-08 19:48:17,500 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.1 pTM=0.412 ipTM=0.158 tol=2.22
2024-07-08 19:48:25,206 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.3 pTM=0.42 ipTM=0.175 tol=2.42
2024-07-08 19:48:32,917 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.1 pTM=0.415 ipTM=0.185 tol=2.18
2024-07-08 19:48:40,617 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47 pTM=0.417 ipTM=0.204 tol=1.92
2024-07-08 19:48:48,318 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47 pTM=0.415 ipTM=0.194 tol=1.42
2024-07-08 19:48:56,025 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47 pTM=0.416 ipTM=0.18 tol=1.84
2024-07-08 19:49:03,736 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.1 pTM=0.417 ipTM=0.174 tol=1.71
2024-07-08 19:49:11,444 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47 pTM=0.418 ipTM=0.179 tol=2.49
2024-07-08 19:49:19,149 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.9 pTM=0.414 ipTM=0.17 tol=1.79
2024-07-08 19:49:26,856 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47 pTM=0.419 ipTM=0.187 tol=2.95
2024-07-08 19:49:34,552 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.9 pTM=0.417 ipTM=0.193 tol=3.04
2024-07-08 19:49:42,251 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.1 pTM=0.418 ipTM=0.186 tol=2.09
2024-07-08 19:49:49,949 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.1 pTM=0.419 ipTM=0.189 tol=2.65
2024-07-08 19:49:57,648 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.1 pTM=0.418 ipTM=0.196 tol=1.15
2024-07-08 19:50:05,352 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.3 pTM=0.418 ipTM=0.188 tol=2.02
2024-07-08 19:50:13,052 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.3 pTM=0.42 ipTM=0.184 tol=1.22
2024-07-08 19:50:20,757 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.2 pTM=0.419 ipTM=0.195 tol=1.78
2024-07-08 19:50:28,456 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.1 pTM=0.418 ipTM=0.182 tol=2.43
2024-07-08 19:50:36,146 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.1 pTM=0.419 ipTM=0.18 tol=1.63
2024-07-08 19:50:43,848 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47 pTM=0.418 ipTM=0.184 tol=1.78
2024-07-08 19:50:51,551 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.9 pTM=0.418 ipTM=0.188 tol=2.38
2024-07-08 19:50:59,249 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.1 pTM=0.422 ipTM=0.203 tol=2.23
2024-07-08 19:50:59,250 alphafold2_multimer_v3_model_4_seed_000 took 239.0s (30 recycles)
2024-07-08 19:51:07,245 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.8 pTM=0.404 ipTM=0.146
2024-07-08 19:51:14,988 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46 pTM=0.418 ipTM=0.165 tol=15.5
2024-07-08 19:51:22,722 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=47.1 pTM=0.422 ipTM=0.159 tol=9.81
2024-07-08 19:51:30,466 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.5 pTM=0.421 ipTM=0.151 tol=8.94
2024-07-08 19:51:38,214 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.2 pTM=0.413 ipTM=0.133 tol=5.91
2024-07-08 19:51:45,969 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.3 pTM=0.404 ipTM=0.125 tol=5.65
2024-07-08 19:51:53,730 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.1 pTM=0.4 ipTM=0.12 tol=7.34
2024-07-08 19:52:01,491 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.5 pTM=0.397 ipTM=0.12 tol=8.27
2024-07-08 19:52:09,255 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.5 pTM=0.398 ipTM=0.13 tol=8.19
2024-07-08 19:52:17,015 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.6 pTM=0.397 ipTM=0.128 tol=4.39
2024-07-08 19:52:24,773 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.8 pTM=0.403 ipTM=0.14 tol=5.57
2024-07-08 19:52:32,531 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.7 pTM=0.399 ipTM=0.131 tol=6.64
2024-07-08 19:52:40,291 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.8 pTM=0.401 ipTM=0.14 tol=5.47
2024-07-08 19:52:48,052 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.9 pTM=0.399 ipTM=0.128 tol=4.11
2024-07-08 19:52:55,793 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.8 pTM=0.402 ipTM=0.138 tol=4.48
2024-07-08 19:53:03,548 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.8 pTM=0.399 ipTM=0.13 tol=5.12
2024-07-08 19:53:11,298 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.8 pTM=0.402 ipTM=0.14 tol=2.75
2024-07-08 19:53:19,051 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.9 pTM=0.399 ipTM=0.129 tol=3.23
2024-07-08 19:53:26,801 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.8 pTM=0.4 ipTM=0.139 tol=2.73
2024-07-08 19:53:34,552 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.6 pTM=0.397 ipTM=0.13 tol=3.22
2024-07-08 19:53:42,300 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.8 pTM=0.401 ipTM=0.137 tol=2.98
2024-07-08 19:53:50,052 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.7 pTM=0.399 ipTM=0.125 tol=1.87
2024-07-08 19:53:57,800 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.7 pTM=0.399 ipTM=0.131 tol=2.57
2024-07-08 19:54:05,559 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.8 pTM=0.399 ipTM=0.125 tol=3.24
2024-07-08 19:54:13,310 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48 pTM=0.403 ipTM=0.137 tol=2.83
2024-07-08 19:54:21,068 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48 pTM=0.4 ipTM=0.127 tol=3.83
2024-07-08 19:54:28,820 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.8 pTM=0.4 ipTM=0.132 tol=5.08
2024-07-08 19:54:36,567 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.6 pTM=0.398 ipTM=0.128 tol=4.09
2024-07-08 19:54:44,312 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.6 pTM=0.403 ipTM=0.14 tol=4.44
2024-07-08 19:54:52,058 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.5 pTM=0.401 ipTM=0.133 tol=4.41
2024-07-08 19:54:59,797 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.2 pTM=0.406 ipTM=0.146 tol=4.39
2024-07-08 19:54:59,798 alphafold2_multimer_v3_model_5_seed_000 took 240.3s (30 recycles)
2024-07-08 19:55:00,037 reranking models by 'multimer' metric
2024-07-08 19:55:03,233 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 19:55:59,146 Relaxation took 59.1s
2024-07-08 19:55:59,147 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.1 pTM=0.422 ipTM=0.203
2024-07-08 19:56:36,428 Relaxation took 37.3s
2024-07-08 19:56:36,428 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=46 pTM=0.407 ipTM=0.172
2024-07-08 19:57:13,478 Relaxation took 37.0s
2024-07-08 19:57:13,478 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=46.6 pTM=0.407 ipTM=0.15
2024-07-08 19:57:49,309 Relaxation took 35.8s
2024-07-08 19:57:49,309 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.2 pTM=0.406 ipTM=0.146
2024-07-08 19:58:41,170 Relaxation took 51.9s
2024-07-08 19:58:41,171 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.6 pTM=0.404 ipTM=0.143
2024-07-08 19:58:42,279 Done