2024-07-08 20:17:17,942 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 20:17:18,246 Running on GPU
2024-07-08 20:17:22,021 Found 6 citations for tools or databases
2024-07-08 20:17:22,022 Query 1/1: BRD3_ERF3A (length 1225)
2024-07-08 20:17:22,530 Sleeping for 5s. Reason: PENDING
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2024-07-08 20:20:31,124 Sleeping for 5s. Reason: RUNNING
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2024-07-08 20:20:43,954 Sleeping for 5s. Reason: RUNNING
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2024-07-08 20:21:03,199 Sleeping for 8s. Reason: RUNNING
2024-07-08 20:21:11,627 Sleeping for 6s. Reason: RUNNING
2024-07-08 20:22:02,409 Sleeping for 7s. Reason: PENDING
2024-07-08 20:22:10,093 Sleeping for 10s. Reason: RUNNING
2024-07-08 20:22:20,522 Sleeping for 10s. Reason: RUNNING
2024-07-08 20:22:30,959 Sleeping for 5s. Reason: RUNNING
2024-07-08 20:22:36,380 Sleeping for 10s. Reason: RUNNING
2024-07-08 20:22:46,801 Sleeping for 5s. Reason: RUNNING
2024-07-08 20:22:52,222 Sleeping for 6s. Reason: RUNNING
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2024-07-08 20:23:06,612 Sleeping for 10s. Reason: RUNNING
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2024-07-08 20:23:31,875 Sleeping for 5s. Reason: RUNNING
2024-07-08 20:23:37,589 Sleeping for 10s. Reason: RUNNING
2024-07-08 20:23:48,004 Sleeping for 10s. Reason: RUNNING
2024-07-08 20:23:59,558 Sleeping for 6s. Reason: RUNNING
2024-07-08 20:24:05,991 Sleeping for 7s. Reason: RUNNING
2024-07-08 20:24:13,410 Sleeping for 8s. Reason: RUNNING
2024-07-08 20:24:21,831 Sleeping for 6s. Reason: RUNNING
2024-07-08 20:24:28,245 Sleeping for 6s. Reason: RUNNING
2024-07-08 20:24:34,669 Sleeping for 8s. Reason: RUNNING
2024-07-08 20:24:43,092 Sleeping for 7s. Reason: RUNNING
2024-07-08 20:25:03,300 Setting max_seq=508, max_extra_seq=2048
2024-07-08 20:28:27,731 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.9 pTM=0.443 ipTM=0.388
2024-07-08 20:29:05,015 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.6 pTM=0.431 ipTM=0.234 tol=10
2024-07-08 20:29:42,535 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.3 pTM=0.433 ipTM=0.221 tol=6.82
2024-07-08 20:30:20,112 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.9 pTM=0.44 ipTM=0.275 tol=7.64
2024-07-08 20:30:57,793 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.6 pTM=0.447 ipTM=0.283 tol=4.33
2024-07-08 20:31:35,480 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.2 pTM=0.455 ipTM=0.33 tol=4.19
2024-07-08 20:32:13,206 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.4 pTM=0.456 ipTM=0.355 tol=4.11
2024-07-08 20:32:50,960 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.9 pTM=0.46 ipTM=0.392 tol=2.68
2024-07-08 20:33:28,657 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60 pTM=0.463 ipTM=0.406 tol=2.6
2024-07-08 20:34:06,459 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.2 pTM=0.465 ipTM=0.407 tol=2.81
2024-07-08 20:34:44,242 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.3 pTM=0.467 ipTM=0.423 tol=1.71
2024-07-08 20:35:21,923 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60 pTM=0.465 ipTM=0.416 tol=1.49
2024-07-08 20:35:59,691 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.2 pTM=0.468 ipTM=0.427 tol=1.67
2024-07-08 20:36:37,481 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60 pTM=0.464 ipTM=0.403 tol=2.84
2024-07-08 20:37:15,307 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60 pTM=0.464 ipTM=0.406 tol=1.75
2024-07-08 20:37:53,132 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60 pTM=0.464 ipTM=0.403 tol=2.11
2024-07-08 20:38:30,868 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.9 pTM=0.465 ipTM=0.408 tol=3.59
2024-07-08 20:39:08,826 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.1 pTM=0.467 ipTM=0.411 tol=3.28
2024-07-08 20:39:46,554 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.1 pTM=0.465 ipTM=0.409 tol=2.66
2024-07-08 20:40:24,258 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.2 pTM=0.468 ipTM=0.426 tol=3.71
2024-07-08 20:41:02,055 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.3 pTM=0.469 ipTM=0.443 tol=3.81
2024-07-08 20:41:39,869 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.3 pTM=0.47 ipTM=0.448 tol=3.57
2024-07-08 20:42:17,647 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.2 pTM=0.468 ipTM=0.42 tol=2.5
2024-07-08 20:42:55,419 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.2 pTM=0.467 ipTM=0.414 tol=2.51
2024-07-08 20:43:33,215 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.4 pTM=0.47 ipTM=0.433 tol=1.88
2024-07-08 20:44:11,024 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.2 pTM=0.467 ipTM=0.429 tol=1.96
2024-07-08 20:44:48,813 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.3 pTM=0.467 ipTM=0.43 tol=1.44
2024-07-08 20:45:26,581 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.9 pTM=0.465 ipTM=0.424 tol=2.32
2024-07-08 20:46:04,269 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.2 pTM=0.466 ipTM=0.422 tol=4.09
2024-07-08 20:46:41,946 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.1 pTM=0.464 ipTM=0.398 tol=4.29
2024-07-08 20:47:19,643 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.1 pTM=0.467 ipTM=0.402 tol=1.78
2024-07-08 20:47:19,644 alphafold2_multimer_v3_model_1_seed_000 took 1331.6s (30 recycles)
2024-07-08 20:47:58,436 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58 pTM=0.423 ipTM=0.239
2024-07-08 20:48:36,360 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.6 pTM=0.419 ipTM=0.187 tol=16.6
2024-07-08 20:49:14,314 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.5 pTM=0.419 ipTM=0.188 tol=9.15
2024-07-08 20:49:52,146 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.7 pTM=0.42 ipTM=0.227 tol=7.57
2024-07-08 20:50:30,100 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.1 pTM=0.43 ipTM=0.312 tol=5.14
2024-07-08 20:51:08,175 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.2 pTM=0.454 ipTM=0.503 tol=6.2
2024-07-08 20:51:46,276 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.7 pTM=0.461 ipTM=0.558 tol=8.2
2024-07-08 20:52:24,303 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.8 pTM=0.463 ipTM=0.571 tol=5.7
2024-07-08 20:53:02,281 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.9 pTM=0.462 ipTM=0.576 tol=2.62
2024-07-08 20:53:40,390 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62 pTM=0.464 ipTM=0.575 tol=2.33
2024-07-08 20:54:18,284 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.8 pTM=0.464 ipTM=0.576 tol=2.59
2024-07-08 20:54:56,165 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.8 pTM=0.461 ipTM=0.576 tol=3.71
2024-07-08 20:55:34,123 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.8 pTM=0.463 ipTM=0.581 tol=3.27
2024-07-08 20:56:12,073 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.7 pTM=0.462 ipTM=0.571 tol=2.54
2024-07-08 20:56:49,908 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.7 pTM=0.46 ipTM=0.568 tol=1.76
2024-07-08 20:57:27,855 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.7 pTM=0.462 ipTM=0.578 tol=2.63
2024-07-08 20:58:05,836 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.5 pTM=0.46 ipTM=0.568 tol=3.23
2024-07-08 20:58:43,823 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.8 pTM=0.462 ipTM=0.573 tol=2.65
2024-07-08 20:59:21,695 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.8 pTM=0.463 ipTM=0.581 tol=3.54
2024-07-08 20:59:59,556 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.6 pTM=0.465 ipTM=0.58 tol=3.55
2024-07-08 21:00:37,533 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.7 pTM=0.464 ipTM=0.584 tol=2.84
2024-07-08 21:01:15,399 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.7 pTM=0.465 ipTM=0.588 tol=2.51
2024-07-08 21:01:53,259 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.6 pTM=0.462 ipTM=0.568 tol=4.08
2024-07-08 21:02:31,093 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.7 pTM=0.463 ipTM=0.574 tol=5.05
2024-07-08 21:03:09,014 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.6 pTM=0.466 ipTM=0.583 tol=3.2
2024-07-08 21:03:46,931 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.6 pTM=0.464 ipTM=0.567 tol=4.13
2024-07-08 21:04:24,755 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.7 pTM=0.464 ipTM=0.579 tol=4.23
2024-07-08 21:05:02,700 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.3 pTM=0.462 ipTM=0.58 tol=2.86
2024-07-08 21:05:40,618 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.6 pTM=0.462 ipTM=0.578 tol=2.81
2024-07-08 21:06:18,449 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.6 pTM=0.463 ipTM=0.571 tol=2.78
2024-07-08 21:06:56,402 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.2 pTM=0.462 ipTM=0.572 tol=6.07
2024-07-08 21:06:56,404 alphafold2_multimer_v3_model_2_seed_000 took 1175.9s (30 recycles)
2024-07-08 21:07:35,297 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.6 pTM=0.43 ipTM=0.205
2024-07-08 21:08:13,407 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.7 pTM=0.425 ipTM=0.185 tol=22.3
2024-07-08 21:08:51,523 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.1 pTM=0.433 ipTM=0.229 tol=10.2
2024-07-08 21:09:29,505 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.3 pTM=0.467 ipTM=0.568 tol=10.2
2024-07-08 21:10:07,609 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.6 pTM=0.472 ipTM=0.612 tol=7.07
2024-07-08 21:10:45,716 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62 pTM=0.475 ipTM=0.645 tol=4.82
2024-07-08 21:11:23,818 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62 pTM=0.475 ipTM=0.646 tol=4.39
2024-07-08 21:12:02,070 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.1 pTM=0.478 ipTM=0.666 tol=5.82
2024-07-08 21:12:40,108 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.3 pTM=0.478 ipTM=0.675 tol=3.34
2024-07-08 21:13:18,132 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.3 pTM=0.479 ipTM=0.675 tol=2.86
2024-07-08 21:13:56,271 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.3 pTM=0.479 ipTM=0.679 tol=1.95
2024-07-08 21:14:34,377 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.3 pTM=0.479 ipTM=0.677 tol=1.7
2024-07-08 21:15:12,487 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.2 pTM=0.481 ipTM=0.685 tol=2.19
2024-07-08 21:15:50,489 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.1 pTM=0.484 ipTM=0.678 tol=3.39
2024-07-08 21:16:28,483 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.1 pTM=0.485 ipTM=0.679 tol=3.74
2024-07-08 21:17:06,488 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.8 pTM=0.486 ipTM=0.68 tol=3.59
2024-07-08 21:17:44,510 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.7 pTM=0.482 ipTM=0.674 tol=5.65
2024-07-08 21:18:22,657 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.8 pTM=0.484 ipTM=0.681 tol=4.06
2024-07-08 21:19:00,815 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62 pTM=0.491 ipTM=0.685 tol=4.07
2024-07-08 21:19:38,840 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62 pTM=0.489 ipTM=0.685 tol=4.71
2024-07-08 21:20:16,860 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.9 pTM=0.489 ipTM=0.683 tol=3.58
2024-07-08 21:20:54,882 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.9 pTM=0.489 ipTM=0.683 tol=2.59
2024-07-08 21:21:33,013 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.9 pTM=0.484 ipTM=0.673 tol=1.81
2024-07-08 21:22:11,048 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.9 pTM=0.485 ipTM=0.677 tol=2.45
2024-07-08 21:22:49,088 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.9 pTM=0.485 ipTM=0.681 tol=2.89
2024-07-08 21:23:27,122 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.9 pTM=0.483 ipTM=0.682 tol=1.78
2024-07-08 21:24:05,277 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.9 pTM=0.487 ipTM=0.68 tol=1.83
2024-07-08 21:24:43,396 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.7 pTM=0.484 ipTM=0.678 tol=2.14
2024-07-08 21:25:21,500 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.9 pTM=0.483 ipTM=0.678 tol=1.81
2024-07-08 21:25:59,612 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.9 pTM=0.485 ipTM=0.673 tol=1.46
2024-07-08 21:26:37,746 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.8 pTM=0.482 ipTM=0.672 tol=1.2
2024-07-08 21:26:37,748 alphafold2_multimer_v3_model_3_seed_000 took 1180.4s (30 recycles)
2024-07-08 21:27:16,573 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.5 pTM=0.463 ipTM=0.434
2024-07-08 21:27:54,534 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.4 pTM=0.49 ipTM=0.691 tol=16.8
2024-07-08 21:28:32,398 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.8 pTM=0.485 ipTM=0.703 tol=14.7
2024-07-08 21:29:10,449 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.3 pTM=0.476 ipTM=0.688 tol=10.1
2024-07-08 21:29:48,422 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.3 pTM=0.476 ipTM=0.686 tol=4.56
2024-07-08 21:30:26,417 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.4 pTM=0.474 ipTM=0.684 tol=5.49
2024-07-08 21:31:04,397 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.2 pTM=0.471 ipTM=0.676 tol=5.45
2024-07-08 21:31:42,271 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.9 pTM=0.474 ipTM=0.68 tol=3.75
2024-07-08 21:32:20,175 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.8 pTM=0.474 ipTM=0.683 tol=7.04
2024-07-08 21:32:58,034 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.4 pTM=0.468 ipTM=0.668 tol=4.93
2024-07-08 21:33:35,888 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.4 pTM=0.458 ipTM=0.649 tol=3.8
2024-07-08 21:34:13,862 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.3 pTM=0.474 ipTM=0.678 tol=4.65
2024-07-08 21:34:51,812 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.3 pTM=0.46 ipTM=0.636 tol=3.69
2024-07-08 21:35:29,762 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.9 pTM=0.479 ipTM=0.693 tol=3.25
2024-07-08 21:36:07,703 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.4 pTM=0.452 ipTM=0.625 tol=3.15
2024-07-08 21:36:45,644 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.5 pTM=0.459 ipTM=0.642 tol=3.84
2024-07-08 21:37:23,506 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.7 pTM=0.455 ipTM=0.628 tol=3.53
2024-07-08 21:38:01,520 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.3 pTM=0.441 ipTM=0.605 tol=5.84
2024-07-08 21:38:39,376 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.9 pTM=0.45 ipTM=0.635 tol=4.2
2024-07-08 21:39:17,343 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.1 pTM=0.46 ipTM=0.649 tol=4.88
2024-07-08 21:39:55,192 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.8 pTM=0.458 ipTM=0.643 tol=5.36
2024-07-08 21:40:33,028 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.9 pTM=0.464 ipTM=0.663 tol=2.21
2024-07-08 21:41:10,862 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=56.6 pTM=0.452 ipTM=0.625 tol=2.4
2024-07-08 21:41:48,843 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.8 pTM=0.453 ipTM=0.632 tol=3.24
2024-07-08 21:42:26,855 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.5 pTM=0.463 ipTM=0.664 tol=4.17
2024-07-08 21:43:04,889 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.6 pTM=0.473 ipTM=0.679 tol=3.25
2024-07-08 21:43:42,827 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.9 pTM=0.457 ipTM=0.635 tol=3.39
2024-07-08 21:44:20,734 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.8 pTM=0.46 ipTM=0.645 tol=3.33
2024-07-08 21:44:58,774 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.8 pTM=0.454 ipTM=0.63 tol=2.34
2024-07-08 21:45:36,713 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.7 pTM=0.477 ipTM=0.69 tol=3.69
2024-07-08 21:46:14,638 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.9 pTM=0.458 ipTM=0.64 tol=3.34
2024-07-08 21:46:14,640 alphafold2_multimer_v3_model_4_seed_000 took 1176.0s (30 recycles)
2024-07-08 21:46:53,632 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.2 pTM=0.412 ipTM=0.311
2024-07-08 21:47:31,743 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.2 pTM=0.42 ipTM=0.183 tol=13.1
2024-07-08 21:48:09,859 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59 pTM=0.419 ipTM=0.156 tol=13.9
2024-07-08 21:48:47,996 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.2 pTM=0.418 ipTM=0.16 tol=10.7
2024-07-08 21:49:26,021 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.6 pTM=0.42 ipTM=0.184 tol=12.7
2024-07-08 21:50:04,095 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.9 pTM=0.418 ipTM=0.157 tol=10.5
2024-07-08 21:50:42,157 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59 pTM=0.419 ipTM=0.164 tol=9.92
2024-07-08 21:51:20,232 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.4 pTM=0.443 ipTM=0.367 tol=7.42
2024-07-08 21:51:58,303 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.8 pTM=0.456 ipTM=0.472 tol=7.45
2024-07-08 21:52:36,415 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.7 pTM=0.456 ipTM=0.489 tol=4.34
2024-07-08 21:53:14,485 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.6 pTM=0.46 ipTM=0.526 tol=4.12
2024-07-08 21:53:52,496 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.7 pTM=0.46 ipTM=0.515 tol=3.15
2024-07-08 21:54:30,587 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.7 pTM=0.458 ipTM=0.499 tol=2.98
2024-07-08 21:55:08,752 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.5 pTM=0.455 ipTM=0.489 tol=2.71
2024-07-08 21:55:46,680 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.9 pTM=0.465 ipTM=0.504 tol=4.01
2024-07-08 21:56:24,615 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.2 pTM=0.47 ipTM=0.502 tol=4.52
2024-07-08 21:57:02,593 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.4 pTM=0.474 ipTM=0.507 tol=9.69
2024-07-08 21:57:40,690 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.9 pTM=0.479 ipTM=0.47 tol=3.65
2024-07-08 21:58:18,740 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61 pTM=0.483 ipTM=0.478 tol=3.93
2024-07-08 21:58:56,805 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61 pTM=0.483 ipTM=0.488 tol=2.81
2024-07-08 21:59:34,831 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.1 pTM=0.487 ipTM=0.497 tol=3.4
2024-07-08 22:00:12,765 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61 pTM=0.483 ipTM=0.475 tol=5.68
2024-07-08 22:00:50,799 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.8 pTM=0.478 ipTM=0.472 tol=8.16
2024-07-08 22:01:28,839 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61 pTM=0.478 ipTM=0.475 tol=7.32
2024-07-08 22:02:06,789 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61 pTM=0.481 ipTM=0.484 tol=6.06
2024-07-08 22:02:44,827 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60.8 pTM=0.472 ipTM=0.467 tol=2.57
2024-07-08 22:03:22,927 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61 pTM=0.481 ipTM=0.5 tol=3.59
2024-07-08 22:04:00,977 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.7 pTM=0.472 ipTM=0.49 tol=2.34
2024-07-08 22:04:39,034 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.1 pTM=0.48 ipTM=0.502 tol=3.11
2024-07-08 22:05:17,066 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61 pTM=0.478 ipTM=0.475 tol=4.2
2024-07-08 22:05:55,129 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60.8 pTM=0.477 ipTM=0.473 tol=2.42
2024-07-08 22:05:55,130 alphafold2_multimer_v3_model_5_seed_000 took 1179.6s (30 recycles)
2024-07-08 22:05:56,037 reranking models by 'multimer' metric
2024-07-08 22:05:57,552 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 22:07:49,788 Relaxation took 113.8s
2024-07-08 22:07:49,788 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.8 pTM=0.482 ipTM=0.672
2024-07-08 22:09:31,274 Relaxation took 101.5s
2024-07-08 22:09:31,274 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.9 pTM=0.458 ipTM=0.64
2024-07-08 22:11:37,051 Relaxation took 125.8s
2024-07-08 22:11:37,052 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.2 pTM=0.462 ipTM=0.572
2024-07-08 22:13:26,883 Relaxation took 109.8s
2024-07-08 22:13:26,883 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60.8 pTM=0.477 ipTM=0.473
2024-07-08 22:15:23,351 Relaxation took 116.5s
2024-07-08 22:15:23,351 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.1 pTM=0.467 ipTM=0.402
2024-07-08 22:15:25,632 Done