2024-07-08 22:20:58,011 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 22:20:58,345 Running on GPU
2024-07-08 22:21:02,974 Found 6 citations for tools or databases
2024-07-08 22:21:02,974 Query 1/1: CANB2_ADH1G (length 545)
2024-07-08 22:21:03,552 Sleeping for 7s. Reason: PENDING
2024-07-08 22:21:10,983 Sleeping for 10s. Reason: RUNNING
2024-07-08 22:21:21,401 Sleeping for 5s. Reason: RUNNING
2024-07-08 22:21:26,815 Sleeping for 9s. Reason: RUNNING
2024-07-08 22:21:36,230 Sleeping for 9s. Reason: RUNNING
2024-07-08 22:21:45,684 Sleeping for 6s. Reason: RUNNING
2024-07-08 22:21:52,095 Sleeping for 5s. Reason: RUNNING
2024-07-08 22:21:57,543 Sleeping for 10s. Reason: RUNNING
2024-07-08 22:22:07,984 Sleeping for 8s. Reason: RUNNING
2024-07-08 22:22:16,410 Sleeping for 8s. Reason: RUNNING
2024-07-08 22:22:24,848 Sleeping for 7s. Reason: RUNNING
2024-07-08 22:22:32,315 Sleeping for 10s. Reason: RUNNING
2024-07-08 22:22:42,732 Sleeping for 5s. Reason: RUNNING
2024-07-08 22:22:48,158 Sleeping for 8s. Reason: RUNNING
2024-07-08 22:22:56,592 Sleeping for 10s. Reason: RUNNING
2024-07-08 22:23:07,226 Sleeping for 5s. Reason: RUNNING
2024-07-08 22:23:12,678 Sleeping for 10s. Reason: RUNNING
2024-07-08 22:23:23,100 Sleeping for 10s. Reason: RUNNING
2024-07-08 22:23:33,539 Sleeping for 8s. Reason: RUNNING
2024-07-08 22:23:41,989 Sleeping for 6s. Reason: RUNNING
2024-07-08 22:24:06,353 Sleeping for 10s. Reason: PENDING
2024-07-08 22:24:17,285 Sleeping for 7s. Reason: RUNNING
2024-07-08 22:24:24,726 Sleeping for 6s. Reason: RUNNING
2024-07-08 22:24:31,143 Sleeping for 6s. Reason: RUNNING
2024-07-08 22:24:39,703 Sleeping for 7s. Reason: RUNNING
2024-07-08 22:24:47,126 Sleeping for 9s. Reason: RUNNING
2024-07-08 22:24:56,553 Sleeping for 10s. Reason: RUNNING
2024-07-08 22:25:06,974 Sleeping for 6s. Reason: RUNNING
2024-07-08 22:25:13,377 Sleeping for 5s. Reason: RUNNING
2024-07-08 22:25:18,809 Sleeping for 6s. Reason: RUNNING
2024-07-08 22:25:25,239 Sleeping for 10s. Reason: RUNNING
2024-07-08 22:25:35,681 Sleeping for 6s. Reason: RUNNING
2024-07-08 22:25:42,096 Sleeping for 7s. Reason: RUNNING
2024-07-08 22:25:49,516 Sleeping for 10s. Reason: RUNNING
2024-07-08 22:26:00,407 Sleeping for 10s. Reason: RUNNING
2024-07-08 22:26:10,853 Sleeping for 9s. Reason: RUNNING
2024-07-08 22:26:27,383 Setting max_seq=508, max_extra_seq=2048
2024-07-08 22:29:25,574 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=82.6 pTM=0.685 ipTM=0.128
2024-07-08 22:29:33,174 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=83.9 pTM=0.69 ipTM=0.122 tol=2.98
2024-07-08 22:29:40,746 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=84 pTM=0.691 ipTM=0.13 tol=5.22
2024-07-08 22:29:48,325 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=83.8 pTM=0.69 ipTM=0.127 tol=1.82
2024-07-08 22:29:55,905 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=83.8 pTM=0.691 ipTM=0.132 tol=1.28
2024-07-08 22:30:03,490 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=83.3 pTM=0.692 ipTM=0.137 tol=2.12
2024-07-08 22:30:11,086 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=83.6 pTM=0.692 ipTM=0.135 tol=1.08
2024-07-08 22:30:18,675 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=83.4 pTM=0.692 ipTM=0.134 tol=1.45
2024-07-08 22:30:26,263 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=83.7 pTM=0.691 ipTM=0.13 tol=1.02
2024-07-08 22:30:33,857 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=83.9 pTM=0.691 ipTM=0.128 tol=0.738
2024-07-08 22:30:41,449 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=83.8 pTM=0.69 ipTM=0.126 tol=0.517
2024-07-08 22:30:49,044 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=83.9 pTM=0.69 ipTM=0.125 tol=0.322
2024-07-08 22:30:49,045 alphafold2_multimer_v3_model_1_seed_000 took 252.6s (11 recycles)
2024-07-08 22:30:56,826 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=85.3 pTM=0.692 ipTM=0.168
2024-07-08 22:31:04,432 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=86.4 pTM=0.701 ipTM=0.176 tol=3.05
2024-07-08 22:31:12,011 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=85.9 pTM=0.7 ipTM=0.172 tol=2.18
2024-07-08 22:31:19,587 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=86.2 pTM=0.697 ipTM=0.161 tol=1.55
2024-07-08 22:31:27,164 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=86.3 pTM=0.699 ipTM=0.166 tol=1.36
2024-07-08 22:31:34,734 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=85.9 pTM=0.696 ipTM=0.163 tol=1.65
2024-07-08 22:31:42,295 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=85.9 pTM=0.699 ipTM=0.169 tol=1.35
2024-07-08 22:31:49,858 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=86 pTM=0.696 ipTM=0.161 tol=1.14
2024-07-08 22:31:57,432 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=86.2 pTM=0.696 ipTM=0.162 tol=0.889
2024-07-08 22:32:05,009 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=86.2 pTM=0.697 ipTM=0.167 tol=1.48
2024-07-08 22:32:12,584 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=86.2 pTM=0.696 ipTM=0.163 tol=0.983
2024-07-08 22:32:20,167 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=86.2 pTM=0.696 ipTM=0.162 tol=0.669
2024-07-08 22:32:27,737 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=86.2 pTM=0.696 ipTM=0.164 tol=1.02
2024-07-08 22:32:35,317 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=86.1 pTM=0.696 ipTM=0.165 tol=0.879
2024-07-08 22:32:42,895 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=86.1 pTM=0.696 ipTM=0.164 tol=0.463
2024-07-08 22:32:42,895 alphafold2_multimer_v3_model_2_seed_000 took 113.7s (14 recycles)
2024-07-08 22:32:50,650 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=83 pTM=0.678 ipTM=0.133
2024-07-08 22:32:58,283 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=83.6 pTM=0.699 ipTM=0.251 tol=8.05
2024-07-08 22:33:05,895 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=84.1 pTM=0.699 ipTM=0.247 tol=2.61
2024-07-08 22:33:13,503 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=84.6 pTM=0.699 ipTM=0.244 tol=1.47
2024-07-08 22:33:21,115 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=84.8 pTM=0.698 ipTM=0.232 tol=0.701
2024-07-08 22:33:28,725 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=84.4 pTM=0.701 ipTM=0.26 tol=0.593
2024-07-08 22:33:36,327 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=84.2 pTM=0.698 ipTM=0.226 tol=0.648
2024-07-08 22:33:43,935 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=84.2 pTM=0.697 ipTM=0.214 tol=0.239
2024-07-08 22:33:43,935 alphafold2_multimer_v3_model_3_seed_000 took 60.8s (7 recycles)
2024-07-08 22:33:51,714 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=82.1 pTM=0.693 ipTM=0.18
2024-07-08 22:33:59,392 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=83.1 pTM=0.7 ipTM=0.161 tol=9.01
2024-07-08 22:34:07,060 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=84.1 pTM=0.706 ipTM=0.177 tol=6.07
2024-07-08 22:34:14,719 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=83.9 pTM=0.703 ipTM=0.163 tol=0.966
2024-07-08 22:34:22,385 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=83.9 pTM=0.702 ipTM=0.161 tol=2
2024-07-08 22:34:30,045 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=83.2 pTM=0.701 ipTM=0.159 tol=0.841
2024-07-08 22:34:37,702 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=83.1 pTM=0.701 ipTM=0.157 tol=1.24
2024-07-08 22:34:45,355 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=82.8 pTM=0.702 ipTM=0.16 tol=0.533
2024-07-08 22:34:53,021 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=82.9 pTM=0.702 ipTM=0.159 tol=0.676
2024-07-08 22:35:00,691 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=82.6 pTM=0.703 ipTM=0.163 tol=0.8
2024-07-08 22:35:08,363 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=82.6 pTM=0.702 ipTM=0.161 tol=0.566
2024-07-08 22:35:16,034 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=82.6 pTM=0.702 ipTM=0.161 tol=1.28
2024-07-08 22:35:23,695 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=82.5 pTM=0.701 ipTM=0.155 tol=1.59
2024-07-08 22:35:31,358 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=82.5 pTM=0.701 ipTM=0.156 tol=0.751
2024-07-08 22:35:39,023 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=82.5 pTM=0.702 ipTM=0.16 tol=1.89
2024-07-08 22:35:46,687 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=82.6 pTM=0.703 ipTM=0.163 tol=1.14
2024-07-08 22:35:54,353 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=82.9 pTM=0.701 ipTM=0.159 tol=0.582
2024-07-08 22:36:02,019 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=82.8 pTM=0.701 ipTM=0.158 tol=1.98
2024-07-08 22:36:09,672 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=82.6 pTM=0.7 ipTM=0.154 tol=1.04
2024-07-08 22:36:17,327 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=82.6 pTM=0.701 ipTM=0.155 tol=0.581
2024-07-08 22:36:24,994 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=82.6 pTM=0.702 ipTM=0.158 tol=0.659
2024-07-08 22:36:32,665 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=82.5 pTM=0.702 ipTM=0.158 tol=0.79
2024-07-08 22:36:40,324 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=82.8 pTM=0.702 ipTM=0.157 tol=0.373
2024-07-08 22:36:40,325 alphafold2_multimer_v3_model_4_seed_000 took 176.2s (22 recycles)
2024-07-08 22:36:48,091 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=82.4 pTM=0.705 ipTM=0.208
2024-07-08 22:36:55,714 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=83.1 pTM=0.692 ipTM=0.148 tol=8
2024-07-08 22:37:03,318 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=83.5 pTM=0.697 ipTM=0.162 tol=5.76
2024-07-08 22:37:10,932 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=84.1 pTM=0.694 ipTM=0.14 tol=1.58
2024-07-08 22:37:18,551 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=84.3 pTM=0.691 ipTM=0.133 tol=3.96
2024-07-08 22:37:26,168 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=84.3 pTM=0.692 ipTM=0.134 tol=2.56
2024-07-08 22:37:33,787 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=84 pTM=0.693 ipTM=0.135 tol=1.5
2024-07-08 22:37:41,402 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=83.9 pTM=0.692 ipTM=0.132 tol=0.872
2024-07-08 22:37:49,020 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=83.9 pTM=0.691 ipTM=0.132 tol=0.789
2024-07-08 22:37:56,630 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=84.2 pTM=0.691 ipTM=0.129 tol=0.817
2024-07-08 22:38:04,252 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=84.1 pTM=0.691 ipTM=0.129 tol=1.02
2024-07-08 22:38:11,869 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=83.9 pTM=0.691 ipTM=0.131 tol=0.919
2024-07-08 22:38:19,490 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=83.9 pTM=0.691 ipTM=0.13 tol=0.778
2024-07-08 22:38:27,117 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=84.1 pTM=0.692 ipTM=0.131 tol=0.665
2024-07-08 22:38:34,742 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=84.1 pTM=0.691 ipTM=0.131 tol=0.581
2024-07-08 22:38:42,364 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=84 pTM=0.691 ipTM=0.129 tol=0.488
2024-07-08 22:38:42,365 alphafold2_multimer_v3_model_5_seed_000 took 121.8s (15 recycles)
2024-07-08 22:38:42,559 reranking models by 'multimer' metric
2024-07-08 22:38:47,239 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 22:39:05,504 Relaxation took 22.9s
2024-07-08 22:39:05,504 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=84.2 pTM=0.697 ipTM=0.214
2024-07-08 22:39:16,157 Relaxation took 10.7s
2024-07-08 22:39:16,157 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=86.1 pTM=0.696 ipTM=0.164
2024-07-08 22:39:28,516 Relaxation took 12.4s
2024-07-08 22:39:28,517 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=82.8 pTM=0.702 ipTM=0.157
2024-07-08 22:40:02,179 Relaxation took 33.7s
2024-07-08 22:40:02,179 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=84 pTM=0.691 ipTM=0.129
2024-07-08 22:40:12,203 Relaxation took 10.0s
2024-07-08 22:40:12,203 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=83.9 pTM=0.69 ipTM=0.125
2024-07-08 22:40:13,422 Done