2024-07-08 23:00:51,094 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 23:00:51,418 Running on GPU
2024-07-08 23:00:55,444 Found 6 citations for tools or databases
2024-07-08 23:00:55,444 Query 1/1: CATD_PIGY (length 483)
2024-07-08 23:00:56,338 Sleeping for 5s. Reason: PENDING
2024-07-08 23:01:01,752 Sleeping for 5s. Reason: RUNNING
2024-07-08 23:01:08,478 Sleeping for 9s. Reason: RUNNING
2024-07-08 23:01:17,907 Sleeping for 10s. Reason: RUNNING
2024-07-08 23:01:28,359 Sleeping for 6s. Reason: RUNNING
2024-07-08 23:01:34,810 Sleeping for 7s. Reason: RUNNING
2024-07-08 23:01:42,237 Sleeping for 5s. Reason: RUNNING
2024-07-08 23:01:47,648 Sleeping for 6s. Reason: RUNNING
2024-07-08 23:01:54,068 Sleeping for 8s. Reason: RUNNING
2024-07-08 23:02:02,490 Sleeping for 7s. Reason: RUNNING
2024-07-08 23:02:46,309 Sleeping for 5s. Reason: PENDING
2024-07-08 23:02:51,756 Sleeping for 9s. Reason: RUNNING
2024-07-08 23:03:01,181 Sleeping for 6s. Reason: RUNNING
2024-07-08 23:03:07,592 Sleeping for 10s. Reason: RUNNING
2024-07-08 23:03:20,951 Setting max_seq=508, max_extra_seq=2048
2024-07-08 23:06:05,584 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.4 pTM=0.747 ipTM=0.212
2024-07-08 23:06:10,743 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74.8 pTM=0.752 ipTM=0.177 tol=2.86
2024-07-08 23:06:15,901 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.4 pTM=0.758 ipTM=0.182 tol=1.94
2024-07-08 23:06:21,058 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75.3 pTM=0.763 ipTM=0.178 tol=0.988
2024-07-08 23:06:26,218 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=75.1 pTM=0.76 ipTM=0.188 tol=0.636
2024-07-08 23:06:31,381 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=75.4 pTM=0.761 ipTM=0.189 tol=0.283
2024-07-08 23:06:31,382 alphafold2_multimer_v3_model_1_seed_000 took 185.2s (5 recycles)
2024-07-08 23:06:36,691 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.7 pTM=0.759 ipTM=0.22
2024-07-08 23:06:41,866 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.8 pTM=0.763 ipTM=0.219 tol=3.72
2024-07-08 23:06:47,025 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.1 pTM=0.769 ipTM=0.214 tol=2.08
2024-07-08 23:06:52,183 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=77.4 pTM=0.772 ipTM=0.214 tol=0.651
2024-07-08 23:06:57,335 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=77.6 pTM=0.773 ipTM=0.218 tol=0.306
2024-07-08 23:06:57,336 alphafold2_multimer_v3_model_2_seed_000 took 25.8s (4 recycles)
2024-07-08 23:07:02,628 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.3 pTM=0.751 ipTM=0.228
2024-07-08 23:07:07,785 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.6 pTM=0.752 ipTM=0.204 tol=2.53
2024-07-08 23:07:12,935 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=77 pTM=0.762 ipTM=0.219 tol=1.22
2024-07-08 23:07:18,084 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=76.6 pTM=0.758 ipTM=0.209 tol=0.596
2024-07-08 23:07:23,226 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=76.3 pTM=0.756 ipTM=0.212 tol=0.772
2024-07-08 23:07:28,366 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.2 pTM=0.754 ipTM=0.206 tol=0.438
2024-07-08 23:07:28,367 alphafold2_multimer_v3_model_3_seed_000 took 30.9s (5 recycles)
2024-07-08 23:07:33,685 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76.8 pTM=0.768 ipTM=0.24
2024-07-08 23:07:38,857 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=76.8 pTM=0.763 ipTM=0.229 tol=3.33
2024-07-08 23:07:44,026 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.8 pTM=0.773 ipTM=0.238 tol=2.65
2024-07-08 23:07:49,199 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=78.6 pTM=0.777 ipTM=0.227 tol=2.09
2024-07-08 23:07:54,370 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=78.2 pTM=0.777 ipTM=0.237 tol=1.27
2024-07-08 23:07:59,527 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=78.5 pTM=0.774 ipTM=0.228 tol=1.01
2024-07-08 23:08:04,688 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78.1 pTM=0.774 ipTM=0.228 tol=0.74
2024-07-08 23:08:09,849 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=78.2 pTM=0.776 ipTM=0.23 tol=1.51
2024-07-08 23:08:15,019 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=78.4 pTM=0.779 ipTM=0.234 tol=0.78
2024-07-08 23:08:20,181 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=78.2 pTM=0.776 ipTM=0.228 tol=0.816
2024-07-08 23:08:25,338 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=78.2 pTM=0.776 ipTM=0.227 tol=0.876
2024-07-08 23:08:30,498 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=78.2 pTM=0.777 ipTM=0.229 tol=1.11
2024-07-08 23:08:35,670 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=78.6 pTM=0.779 ipTM=0.228 tol=1.37
2024-07-08 23:08:40,838 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=78.6 pTM=0.779 ipTM=0.229 tol=1.07
2024-07-08 23:08:46,008 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78.6 pTM=0.779 ipTM=0.226 tol=0.752
2024-07-08 23:08:51,179 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.7 pTM=0.779 ipTM=0.227 tol=0.881
2024-07-08 23:08:56,347 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.6 pTM=0.779 ipTM=0.224 tol=0.903
2024-07-08 23:09:01,515 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=78.6 pTM=0.78 ipTM=0.231 tol=1.05
2024-07-08 23:09:06,680 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78.7 pTM=0.778 ipTM=0.229 tol=0.446
2024-07-08 23:09:06,680 alphafold2_multimer_v3_model_4_seed_000 took 98.2s (18 recycles)
2024-07-08 23:09:12,016 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.1 pTM=0.757 ipTM=0.199
2024-07-08 23:09:17,216 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.4 pTM=0.771 ipTM=0.19 tol=3.29
2024-07-08 23:09:22,422 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=77.7 pTM=0.774 ipTM=0.201 tol=0.823
2024-07-08 23:09:27,622 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=77.3 pTM=0.772 ipTM=0.203 tol=0.522
2024-07-08 23:09:32,827 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=77.1 pTM=0.771 ipTM=0.196 tol=0.876
2024-07-08 23:09:38,022 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=77.2 pTM=0.771 ipTM=0.199 tol=0.357
2024-07-08 23:09:38,023 alphafold2_multimer_v3_model_5_seed_000 took 31.2s (5 recycles)
2024-07-08 23:09:38,181 reranking models by 'multimer' metric
2024-07-08 23:09:41,212 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 23:10:09,528 Relaxation took 31.3s
2024-07-08 23:10:09,528 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=78.7 pTM=0.778 ipTM=0.229
2024-07-08 23:10:31,686 Relaxation took 22.2s
2024-07-08 23:10:31,686 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=77.6 pTM=0.773 ipTM=0.218
2024-07-08 23:10:55,373 Relaxation took 23.7s
2024-07-08 23:10:55,373 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.2 pTM=0.754 ipTM=0.206
2024-07-08 23:11:18,617 Relaxation took 23.2s
2024-07-08 23:11:18,617 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=77.2 pTM=0.771 ipTM=0.199
2024-07-08 23:11:45,907 Relaxation took 27.3s
2024-07-08 23:11:45,907 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.4 pTM=0.761 ipTM=0.189
2024-07-08 23:11:46,913 Done