2024-07-09 00:50:53,469 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 00:50:53,777 Running on GPU
2024-07-09 00:50:57,740 Found 6 citations for tools or databases
2024-07-09 00:50:57,740 Query 1/1: CCD39_RAB26 (length 1197)
2024-07-09 00:50:58,230 Sleeping for 10s. Reason: PENDING
2024-07-09 00:51:08,695 Sleeping for 7s. Reason: RUNNING
2024-07-09 00:51:16,108 Sleeping for 6s. Reason: RUNNING
2024-07-09 00:51:22,570 Sleeping for 10s. Reason: RUNNING
2024-07-09 00:51:33,004 Sleeping for 5s. Reason: RUNNING
2024-07-09 00:51:38,419 Sleeping for 7s. Reason: RUNNING
2024-07-09 00:51:45,851 Sleeping for 9s. Reason: RUNNING
2024-07-09 00:51:55,278 Sleeping for 10s. Reason: RUNNING
2024-07-09 00:52:05,708 Sleeping for 6s. Reason: RUNNING
2024-07-09 00:52:12,107 Sleeping for 10s. Reason: RUNNING
2024-07-09 00:52:22,549 Sleeping for 9s. Reason: RUNNING
2024-07-09 00:52:31,987 Sleeping for 8s. Reason: RUNNING
2024-07-09 00:52:50,930 Sleeping for 9s. Reason: PENDING
2024-07-09 00:53:01,488 Sleeping for 10s. Reason: RUNNING
2024-07-09 00:53:11,905 Sleeping for 5s. Reason: RUNNING
2024-07-09 00:53:17,335 Sleeping for 7s. Reason: RUNNING
2024-07-09 00:53:24,755 Sleeping for 6s. Reason: RUNNING
2024-07-09 00:53:31,178 Sleeping for 5s. Reason: RUNNING
2024-07-09 00:53:40,211 Setting max_seq=508, max_extra_seq=2048
2024-07-09 00:57:02,143 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.8 pTM=0.263 ipTM=0.134
2024-07-09 00:57:37,428 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.6 pTM=0.261 ipTM=0.132 tol=19.9
2024-07-09 00:58:12,872 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.1 pTM=0.263 ipTM=0.147 tol=17
2024-07-09 00:58:48,436 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.1 pTM=0.268 ipTM=0.18 tol=9.91
2024-07-09 00:59:24,036 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.5 pTM=0.269 ipTM=0.179 tol=5.89
2024-07-09 00:59:59,653 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62 pTM=0.273 ipTM=0.221 tol=6.83
2024-07-09 01:00:35,290 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.9 pTM=0.271 ipTM=0.227 tol=4.92
2024-07-09 01:01:11,007 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62 pTM=0.27 ipTM=0.213 tol=5.23
2024-07-09 01:01:46,690 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.3 pTM=0.268 ipTM=0.195 tol=4.17
2024-07-09 01:02:22,457 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.8 pTM=0.267 ipTM=0.191 tol=3.36
2024-07-09 01:02:58,253 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.6 pTM=0.264 ipTM=0.169 tol=6.24
2024-07-09 01:03:34,028 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62 pTM=0.267 ipTM=0.174 tol=6.05
2024-07-09 01:04:09,797 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.5 pTM=0.266 ipTM=0.183 tol=7.02
2024-07-09 01:04:45,483 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.2 pTM=0.268 ipTM=0.194 tol=11.9
2024-07-09 01:05:21,268 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.1 pTM=0.27 ipTM=0.212 tol=6.7
2024-07-09 01:05:56,983 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.9 pTM=0.273 ipTM=0.255 tol=4.24
2024-07-09 01:06:32,713 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.2 pTM=0.272 ipTM=0.257 tol=5.67
2024-07-09 01:07:08,360 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.5 pTM=0.272 ipTM=0.239 tol=4.61
2024-07-09 01:07:44,117 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61 pTM=0.269 ipTM=0.226 tol=3.53
2024-07-09 01:08:19,754 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.3 pTM=0.271 ipTM=0.234 tol=3.05
2024-07-09 01:08:55,406 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.6 pTM=0.272 ipTM=0.25 tol=3.04
2024-07-09 01:09:31,111 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.3 pTM=0.273 ipTM=0.26 tol=2.78
2024-07-09 01:10:06,807 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.2 pTM=0.272 ipTM=0.248 tol=3.15
2024-07-09 01:10:42,539 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.8 pTM=0.272 ipTM=0.241 tol=1.87
2024-07-09 01:11:18,189 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.8 pTM=0.273 ipTM=0.256 tol=2.42
2024-07-09 01:11:53,839 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.8 pTM=0.275 ipTM=0.262 tol=2.01
2024-07-09 01:12:29,493 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.7 pTM=0.274 ipTM=0.271 tol=3.62
2024-07-09 01:13:05,146 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.3 pTM=0.274 ipTM=0.266 tol=2.8
2024-07-09 01:13:40,905 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.9 pTM=0.273 ipTM=0.255 tol=2.31
2024-07-09 01:14:16,657 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61 pTM=0.275 ipTM=0.267 tol=2.03
2024-07-09 01:14:52,420 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.2 pTM=0.272 ipTM=0.25 tol=3.26
2024-07-09 01:14:52,421 alphafold2_multimer_v3_model_1_seed_000 took 1268.0s (30 recycles)
2024-07-09 01:15:28,922 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.6 pTM=0.253 ipTM=0.138
2024-07-09 01:16:04,559 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.3 pTM=0.255 ipTM=0.139 tol=29
2024-07-09 01:16:40,198 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.4 pTM=0.259 ipTM=0.17 tol=21.1
2024-07-09 01:17:15,881 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.8 pTM=0.263 ipTM=0.213 tol=6.07
2024-07-09 01:17:51,568 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.8 pTM=0.262 ipTM=0.2 tol=7.52
2024-07-09 01:18:27,256 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.5 pTM=0.26 ipTM=0.185 tol=5.41
2024-07-09 01:19:02,883 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.8 pTM=0.259 ipTM=0.175 tol=6.79
2024-07-09 01:19:38,543 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.7 pTM=0.259 ipTM=0.156 tol=17.8
2024-07-09 01:20:14,205 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=59.5 pTM=0.257 ipTM=0.143 tol=12.1
2024-07-09 01:20:49,904 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.3 pTM=0.259 ipTM=0.162 tol=11
2024-07-09 01:21:25,551 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59.4 pTM=0.259 ipTM=0.16 tol=6.71
2024-07-09 01:22:01,208 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.4 pTM=0.258 ipTM=0.163 tol=6.99
2024-07-09 01:22:36,868 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.2 pTM=0.258 ipTM=0.165 tol=6.62
2024-07-09 01:23:12,510 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59 pTM=0.258 ipTM=0.171 tol=4.36
2024-07-09 01:23:48,184 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59 pTM=0.258 ipTM=0.169 tol=2.88
2024-07-09 01:24:23,852 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59 pTM=0.259 ipTM=0.178 tol=3.66
2024-07-09 01:24:59,529 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.6 pTM=0.26 ipTM=0.183 tol=3.04
2024-07-09 01:25:35,243 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.2 pTM=0.259 ipTM=0.175 tol=4.66
2024-07-09 01:26:10,896 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.3 pTM=0.259 ipTM=0.169 tol=5.08
2024-07-09 01:26:46,633 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.2 pTM=0.259 ipTM=0.162 tol=6.04
2024-07-09 01:27:22,291 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.3 pTM=0.259 ipTM=0.165 tol=4.76
2024-07-09 01:27:57,955 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58 pTM=0.258 ipTM=0.163 tol=6.6
2024-07-09 01:28:33,685 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.2 pTM=0.258 ipTM=0.162 tol=8.14
2024-07-09 01:29:09,362 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.8 pTM=0.259 ipTM=0.165 tol=10.6
2024-07-09 01:29:45,088 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.7 pTM=0.259 ipTM=0.164 tol=10.6
2024-07-09 01:30:20,802 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.5 pTM=0.26 ipTM=0.172 tol=12
2024-07-09 01:30:56,519 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.5 pTM=0.261 ipTM=0.185 tol=9.66
2024-07-09 01:31:32,203 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.6 pTM=0.261 ipTM=0.19 tol=8.22
2024-07-09 01:32:07,936 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.6 pTM=0.259 ipTM=0.186 tol=7.27
2024-07-09 01:32:43,693 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.9 pTM=0.259 ipTM=0.179 tol=10.9
2024-07-09 01:33:19,456 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.4 pTM=0.259 ipTM=0.175 tol=8.86
2024-07-09 01:33:19,457 alphafold2_multimer_v3_model_2_seed_000 took 1106.2s (30 recycles)
2024-07-09 01:33:56,125 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.8 pTM=0.264 ipTM=0.142
2024-07-09 01:34:31,897 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.9 pTM=0.284 ipTM=0.144 tol=47.8
2024-07-09 01:35:07,509 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.4 pTM=0.3 ipTM=0.195 tol=13
2024-07-09 01:35:43,097 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.1 pTM=0.31 ipTM=0.223 tol=3.67
2024-07-09 01:36:18,584 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.5 pTM=0.315 ipTM=0.26 tol=2.61
2024-07-09 01:36:54,102 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.4 pTM=0.321 ipTM=0.318 tol=3.33
2024-07-09 01:37:29,544 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.9 pTM=0.329 ipTM=0.357 tol=2.51
2024-07-09 01:38:04,972 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.8 pTM=0.335 ipTM=0.38 tol=2.21
2024-07-09 01:38:40,402 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68 pTM=0.333 ipTM=0.376 tol=1.88
2024-07-09 01:39:15,858 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.4 pTM=0.333 ipTM=0.376 tol=3.73
2024-07-09 01:39:51,279 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.2 pTM=0.335 ipTM=0.388 tol=2.59
2024-07-09 01:40:26,706 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.9 pTM=0.334 ipTM=0.379 tol=2.95
2024-07-09 01:41:02,179 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.1 pTM=0.334 ipTM=0.383 tol=1.79
2024-07-09 01:41:37,615 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.2 pTM=0.332 ipTM=0.389 tol=2.42
2024-07-09 01:42:13,149 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.1 pTM=0.337 ipTM=0.388 tol=2.29
2024-07-09 01:42:48,675 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67 pTM=0.336 ipTM=0.389 tol=4.65
2024-07-09 01:43:24,221 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67 pTM=0.332 ipTM=0.362 tol=1.42
2024-07-09 01:43:59,759 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.2 pTM=0.324 ipTM=0.344 tol=1.79
2024-07-09 01:44:35,207 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67 pTM=0.33 ipTM=0.409 tol=1.51
2024-07-09 01:45:10,720 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.1 pTM=0.334 ipTM=0.403 tol=1.88
2024-07-09 01:45:46,147 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.4 pTM=0.336 ipTM=0.414 tol=2.08
2024-07-09 01:46:21,648 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.1 pTM=0.334 ipTM=0.396 tol=0.847
2024-07-09 01:46:57,080 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.4 pTM=0.329 ipTM=0.378 tol=0.895
2024-07-09 01:47:32,548 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.4 pTM=0.332 ipTM=0.412 tol=1.22
2024-07-09 01:48:08,050 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.2 pTM=0.333 ipTM=0.392 tol=0.856
2024-07-09 01:48:43,488 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.9 pTM=0.333 ipTM=0.379 tol=0.801
2024-07-09 01:49:18,982 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.8 pTM=0.331 ipTM=0.387 tol=0.775
2024-07-09 01:49:54,404 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.3 pTM=0.33 ipTM=0.39 tol=0.907
2024-07-09 01:50:29,840 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.9 pTM=0.334 ipTM=0.384 tol=1.5
2024-07-09 01:51:05,270 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.7 pTM=0.329 ipTM=0.367 tol=0.868
2024-07-09 01:51:40,717 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.1 pTM=0.334 ipTM=0.403 tol=0.961
2024-07-09 01:51:40,718 alphafold2_multimer_v3_model_3_seed_000 took 1100.4s (30 recycles)
2024-07-09 01:52:17,375 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.5 pTM=0.26 ipTM=0.186
2024-07-09 01:52:53,082 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.4 pTM=0.256 ipTM=0.199 tol=15.2
2024-07-09 01:53:28,787 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.5 pTM=0.262 ipTM=0.238 tol=6.35
2024-07-09 01:54:04,490 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.2 pTM=0.267 ipTM=0.299 tol=3.96
2024-07-09 01:54:40,213 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.5 pTM=0.271 ipTM=0.313 tol=4.02
2024-07-09 01:55:15,910 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.4 pTM=0.261 ipTM=0.243 tol=5
2024-07-09 01:55:51,658 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.9 pTM=0.259 ipTM=0.214 tol=5.74
2024-07-09 01:56:27,423 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.8 pTM=0.257 ipTM=0.192 tol=4.57
2024-07-09 01:57:03,108 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.2 pTM=0.255 ipTM=0.154 tol=7.95
2024-07-09 01:57:38,904 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.8 pTM=0.256 ipTM=0.148 tol=5.31
2024-07-09 01:58:14,737 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.8 pTM=0.255 ipTM=0.153 tol=4.2
2024-07-09 01:58:50,548 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.6 pTM=0.255 ipTM=0.154 tol=3.04
2024-07-09 01:59:26,299 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.9 pTM=0.256 ipTM=0.191 tol=11.3
2024-07-09 02:00:02,040 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.9 pTM=0.254 ipTM=0.16 tol=3.95
2024-07-09 02:00:37,800 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.5 pTM=0.254 ipTM=0.172 tol=5.5
2024-07-09 02:01:13,585 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.6 pTM=0.257 ipTM=0.197 tol=7.11
2024-07-09 02:01:49,319 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.1 pTM=0.256 ipTM=0.192 tol=4.11
2024-07-09 02:02:25,071 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55.6 pTM=0.256 ipTM=0.164 tol=4.07
2024-07-09 02:03:00,838 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.3 pTM=0.255 ipTM=0.166 tol=3.27
2024-07-09 02:03:36,626 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54.7 pTM=0.256 ipTM=0.15 tol=4.03
2024-07-09 02:04:12,439 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.2 pTM=0.256 ipTM=0.155 tol=2.78
2024-07-09 02:04:48,229 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=54.8 pTM=0.258 ipTM=0.154 tol=3.6
2024-07-09 02:05:24,014 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.7 pTM=0.257 ipTM=0.167 tol=4.91
2024-07-09 02:05:59,880 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54.9 pTM=0.257 ipTM=0.158 tol=3.24
2024-07-09 02:06:35,655 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55 pTM=0.256 ipTM=0.169 tol=5.89
2024-07-09 02:07:11,421 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.1 pTM=0.256 ipTM=0.161 tol=3.51
2024-07-09 02:07:47,265 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=54.7 pTM=0.256 ipTM=0.163 tol=2.36
2024-07-09 02:08:22,986 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.6 pTM=0.255 ipTM=0.149 tol=4.2
2024-07-09 02:08:58,775 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.5 pTM=0.255 ipTM=0.17 tol=7.08
2024-07-09 02:09:34,563 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=54.5 pTM=0.258 ipTM=0.157 tol=6.65
2024-07-09 02:10:10,364 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.4 pTM=0.257 ipTM=0.159 tol=3.35
2024-07-09 02:10:10,365 alphafold2_multimer_v3_model_4_seed_000 took 1108.8s (30 recycles)
2024-07-09 02:10:47,007 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.4 pTM=0.259 ipTM=0.133
2024-07-09 02:11:22,735 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.8 pTM=0.273 ipTM=0.141 tol=27.2
2024-07-09 02:11:58,367 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.2 pTM=0.285 ipTM=0.147 tol=8.75
2024-07-09 02:12:33,916 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.4 pTM=0.29 ipTM=0.15 tol=8.01
2024-07-09 02:13:09,476 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.7 pTM=0.292 ipTM=0.152 tol=3.48
2024-07-09 02:13:45,042 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.9 pTM=0.295 ipTM=0.153 tol=1.74
2024-07-09 02:14:20,584 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63 pTM=0.296 ipTM=0.169 tol=3.51
2024-07-09 02:14:56,141 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.3 pTM=0.301 ipTM=0.174 tol=1.9
2024-07-09 02:15:31,642 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.3 pTM=0.299 ipTM=0.173 tol=1.51
2024-07-09 02:16:07,132 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.1 pTM=0.296 ipTM=0.167 tol=1.4
2024-07-09 02:16:42,667 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63 pTM=0.297 ipTM=0.156 tol=2.48
2024-07-09 02:17:18,224 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.3 pTM=0.297 ipTM=0.153 tol=2.31
2024-07-09 02:17:53,771 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.2 pTM=0.3 ipTM=0.156 tol=1.75
2024-07-09 02:18:29,356 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.4 pTM=0.297 ipTM=0.164 tol=1.88
2024-07-09 02:19:04,876 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.6 pTM=0.297 ipTM=0.161 tol=1.48
2024-07-09 02:19:40,457 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.2 pTM=0.298 ipTM=0.161 tol=1.54
2024-07-09 02:20:16,095 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.7 pTM=0.294 ipTM=0.156 tol=1.17
2024-07-09 02:20:51,643 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.6 pTM=0.292 ipTM=0.15 tol=2.69
2024-07-09 02:21:27,239 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.2 pTM=0.286 ipTM=0.151 tol=2.12
2024-07-09 02:22:02,892 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62 pTM=0.291 ipTM=0.15 tol=2.21
2024-07-09 02:22:38,520 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.3 pTM=0.291 ipTM=0.152 tol=1.61
2024-07-09 02:23:14,094 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.9 pTM=0.286 ipTM=0.152 tol=1.55
2024-07-09 02:23:49,666 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62 pTM=0.287 ipTM=0.152 tol=2.03
2024-07-09 02:24:25,260 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.1 pTM=0.285 ipTM=0.154 tol=1.25
2024-07-09 02:25:00,826 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.7 pTM=0.288 ipTM=0.152 tol=1.34
2024-07-09 02:25:36,408 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.8 pTM=0.286 ipTM=0.148 tol=1.63
2024-07-09 02:26:12,048 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.4 pTM=0.285 ipTM=0.149 tol=1.27
2024-07-09 02:26:47,692 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.3 pTM=0.289 ipTM=0.146 tol=1.51
2024-07-09 02:27:23,348 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.2 pTM=0.284 ipTM=0.147 tol=1.51
2024-07-09 02:27:59,009 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.2 pTM=0.276 ipTM=0.149 tol=1.65
2024-07-09 02:28:34,693 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.3 pTM=0.283 ipTM=0.148 tol=1
2024-07-09 02:28:34,694 alphafold2_multimer_v3_model_5_seed_000 took 1103.5s (30 recycles)
2024-07-09 02:28:35,565 reranking models by 'multimer' metric
2024-07-09 02:28:36,776 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 02:29:15,550 Relaxation took 40.0s
2024-07-09 02:29:15,551 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.1 pTM=0.334 ipTM=0.403
2024-07-09 02:30:46,384 Relaxation took 90.8s
2024-07-09 02:30:46,384 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.2 pTM=0.272 ipTM=0.25
2024-07-09 02:32:13,104 Relaxation took 86.7s
2024-07-09 02:32:13,105 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.4 pTM=0.259 ipTM=0.175
2024-07-09 02:33:50,484 Relaxation took 97.4s
2024-07-09 02:33:50,484 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.4 pTM=0.257 ipTM=0.159
2024-07-09 02:35:10,799 Relaxation took 80.3s
2024-07-09 02:35:10,799 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.3 pTM=0.283 ipTM=0.148
2024-07-09 02:35:13,140 Done