2024-07-09 03:22:01,847 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 03:22:02,146 Running on GPU
2024-07-09 03:22:03,692 Found 6 citations for tools or databases
2024-07-09 03:22:03,693 Query 1/1: CERT_DPEP1 (length 1035)
2024-07-09 03:22:04,122 Sleeping for 10s. Reason: PENDING
2024-07-09 03:22:14,581 Sleeping for 8s. Reason: RUNNING
2024-07-09 03:22:23,019 Sleeping for 6s. Reason: RUNNING
2024-07-09 03:22:29,430 Sleeping for 9s. Reason: RUNNING
2024-07-09 03:22:38,866 Sleeping for 5s. Reason: RUNNING
2024-07-09 03:22:44,278 Sleeping for 10s. Reason: RUNNING
2024-07-09 03:22:54,701 Sleeping for 6s. Reason: RUNNING
2024-07-09 03:23:01,616 Sleeping for 6s. Reason: RUNNING
2024-07-09 03:23:08,034 Sleeping for 8s. Reason: RUNNING
2024-07-09 03:23:16,471 Sleeping for 9s. Reason: RUNNING
2024-07-09 03:23:25,913 Sleeping for 10s. Reason: RUNNING
2024-07-09 03:23:36,341 Sleeping for 10s. Reason: RUNNING
2024-07-09 03:23:46,782 Sleeping for 9s. Reason: RUNNING
2024-07-09 03:24:11,077 Sleeping for 9s. Reason: PENDING
2024-07-09 03:24:20,516 Sleeping for 5s. Reason: RUNNING
2024-07-09 03:24:26,461 Sleeping for 8s. Reason: RUNNING
2024-07-09 03:24:34,888 Sleeping for 7s. Reason: RUNNING
2024-07-09 03:24:42,326 Sleeping for 9s. Reason: RUNNING
2024-07-09 03:24:51,736 Sleeping for 6s. Reason: RUNNING
2024-07-09 03:24:58,169 Sleeping for 8s. Reason: RUNNING
2024-07-09 03:25:06,814 Sleeping for 7s. Reason: RUNNING
2024-07-09 03:25:14,249 Sleeping for 8s. Reason: RUNNING
2024-07-09 03:25:22,668 Sleeping for 10s. Reason: RUNNING
2024-07-09 03:25:33,092 Sleeping for 5s. Reason: RUNNING
2024-07-09 03:25:38,519 Sleeping for 10s. Reason: RUNNING
2024-07-09 03:25:48,974 Sleeping for 6s. Reason: RUNNING
2024-07-09 03:25:55,384 Sleeping for 10s. Reason: RUNNING
2024-07-09 03:26:09,507 Setting max_seq=508, max_extra_seq=2048
2024-07-09 03:29:10,132 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.9 pTM=0.452 ipTM=0.215
2024-07-09 03:29:34,562 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.8 pTM=0.441 ipTM=0.214 tol=10.5
2024-07-09 03:29:59,043 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.6 pTM=0.447 ipTM=0.2 tol=5.57
2024-07-09 03:30:23,594 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.1 pTM=0.447 ipTM=0.163 tol=3.97
2024-07-09 03:30:48,180 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.9 pTM=0.452 ipTM=0.162 tol=3.52
2024-07-09 03:31:12,808 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.2 pTM=0.45 ipTM=0.159 tol=3.93
2024-07-09 03:31:37,468 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.2 pTM=0.45 ipTM=0.158 tol=3.54
2024-07-09 03:32:02,148 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.4 pTM=0.453 ipTM=0.171 tol=3.51
2024-07-09 03:32:26,824 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.2 pTM=0.452 ipTM=0.164 tol=3.3
2024-07-09 03:32:51,512 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.8 pTM=0.454 ipTM=0.168 tol=2.05
2024-07-09 03:33:16,203 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.8 pTM=0.451 ipTM=0.162 tol=1.88
2024-07-09 03:33:40,898 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.8 pTM=0.454 ipTM=0.165 tol=2.02
2024-07-09 03:34:05,615 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.7 pTM=0.453 ipTM=0.165 tol=1.09
2024-07-09 03:34:30,306 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.8 pTM=0.457 ipTM=0.172 tol=2.12
2024-07-09 03:34:55,002 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.4 pTM=0.455 ipTM=0.169 tol=1.4
2024-07-09 03:35:19,690 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.7 pTM=0.458 ipTM=0.172 tol=1.25
2024-07-09 03:35:44,387 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.7 pTM=0.455 ipTM=0.169 tol=1.33
2024-07-09 03:36:09,074 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.7 pTM=0.457 ipTM=0.172 tol=1.27
2024-07-09 03:36:33,789 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.9 pTM=0.453 ipTM=0.166 tol=1.59
2024-07-09 03:36:58,495 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.6 pTM=0.457 ipTM=0.172 tol=1.6
2024-07-09 03:37:23,207 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.7 pTM=0.453 ipTM=0.166 tol=1.64
2024-07-09 03:37:47,917 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.6 pTM=0.458 ipTM=0.173 tol=1.47
2024-07-09 03:38:12,636 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.1 pTM=0.452 ipTM=0.164 tol=1.38
2024-07-09 03:38:37,351 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.8 pTM=0.456 ipTM=0.17 tol=1.21
2024-07-09 03:39:02,066 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.9 pTM=0.453 ipTM=0.165 tol=1.4
2024-07-09 03:39:26,787 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.6 pTM=0.456 ipTM=0.169 tol=1.52
2024-07-09 03:39:51,517 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.2 pTM=0.453 ipTM=0.165 tol=1.95
2024-07-09 03:40:16,239 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.9 pTM=0.457 ipTM=0.171 tol=2.05
2024-07-09 03:40:40,954 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.5 pTM=0.452 ipTM=0.165 tol=1.98
2024-07-09 03:41:05,675 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.4 pTM=0.457 ipTM=0.173 tol=2.02
2024-07-09 03:41:30,387 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.4 pTM=0.453 ipTM=0.166 tol=1.69
2024-07-09 03:41:30,388 alphafold2_multimer_v3_model_1_seed_000 took 916.1s (30 recycles)
2024-07-09 03:41:55,782 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.9 pTM=0.441 ipTM=0.157
2024-07-09 03:42:20,515 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.8 pTM=0.443 ipTM=0.168 tol=10
2024-07-09 03:42:45,276 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.9 pTM=0.446 ipTM=0.156 tol=5.2
2024-07-09 03:43:10,042 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.2 pTM=0.446 ipTM=0.156 tol=3.14
2024-07-09 03:43:34,798 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70 pTM=0.444 ipTM=0.157 tol=1.96
2024-07-09 03:43:59,567 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.9 pTM=0.444 ipTM=0.16 tol=4.68
2024-07-09 03:44:24,327 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.7 pTM=0.446 ipTM=0.16 tol=5.21
2024-07-09 03:44:49,069 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.9 pTM=0.442 ipTM=0.158 tol=3.08
2024-07-09 03:45:13,829 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.2 pTM=0.448 ipTM=0.159 tol=5.09
2024-07-09 03:45:38,581 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.2 pTM=0.447 ipTM=0.16 tol=5.16
2024-07-09 03:46:03,334 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.9 pTM=0.447 ipTM=0.157 tol=2.6
2024-07-09 03:46:28,098 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.3 pTM=0.446 ipTM=0.163 tol=4.94
2024-07-09 03:46:52,842 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.9 pTM=0.449 ipTM=0.164 tol=1.94
2024-07-09 03:47:17,578 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.5 pTM=0.449 ipTM=0.164 tol=1.42
2024-07-09 03:47:42,314 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.4 pTM=0.446 ipTM=0.162 tol=2.79
2024-07-09 03:48:07,050 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70 pTM=0.447 ipTM=0.165 tol=4.38
2024-07-09 03:48:31,784 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.4 pTM=0.447 ipTM=0.162 tol=2.54
2024-07-09 03:48:56,507 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.4 pTM=0.447 ipTM=0.16 tol=1.59
2024-07-09 03:49:21,230 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.5 pTM=0.447 ipTM=0.162 tol=1.67
2024-07-09 03:49:45,955 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.1 pTM=0.447 ipTM=0.165 tol=1.55
2024-07-09 03:50:10,692 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.1 pTM=0.447 ipTM=0.164 tol=1.51
2024-07-09 03:50:35,446 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.3 pTM=0.447 ipTM=0.165 tol=0.801
2024-07-09 03:51:00,212 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.6 pTM=0.446 ipTM=0.165 tol=4.32
2024-07-09 03:51:24,945 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=70.8 pTM=0.448 ipTM=0.165 tol=4.32
2024-07-09 03:51:49,696 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70 pTM=0.445 ipTM=0.161 tol=1.07
2024-07-09 03:52:14,443 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.9 pTM=0.447 ipTM=0.164 tol=3.76
2024-07-09 03:52:39,194 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.2 pTM=0.447 ipTM=0.163 tol=3.74
2024-07-09 03:53:03,953 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=70.3 pTM=0.445 ipTM=0.164 tol=2.22
2024-07-09 03:53:28,696 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.4 pTM=0.446 ipTM=0.166 tol=1.49
2024-07-09 03:53:53,444 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.9 pTM=0.447 ipTM=0.161 tol=3.54
2024-07-09 03:54:18,178 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.9 pTM=0.445 ipTM=0.162 tol=2.11
2024-07-09 03:54:18,179 alphafold2_multimer_v3_model_2_seed_000 took 767.1s (30 recycles)
2024-07-09 03:54:43,641 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.2 pTM=0.439 ipTM=0.146
2024-07-09 03:55:08,439 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.1 pTM=0.451 ipTM=0.181 tol=14.2
2024-07-09 03:55:33,250 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.1 pTM=0.452 ipTM=0.167 tol=6.07
2024-07-09 03:55:58,079 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.5 pTM=0.452 ipTM=0.167 tol=5.57
2024-07-09 03:56:22,906 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.8 pTM=0.455 ipTM=0.172 tol=4.7
2024-07-09 03:56:47,726 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.1 pTM=0.456 ipTM=0.173 tol=6.17
2024-07-09 03:57:12,544 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.4 pTM=0.458 ipTM=0.178 tol=5.09
2024-07-09 03:57:37,362 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.1 pTM=0.457 ipTM=0.177 tol=3.49
2024-07-09 03:58:02,188 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.2 pTM=0.459 ipTM=0.18 tol=2.62
2024-07-09 03:58:27,011 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.4 pTM=0.464 ipTM=0.187 tol=3.67
2024-07-09 03:58:51,840 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.9 pTM=0.459 ipTM=0.18 tol=5.76
2024-07-09 03:59:16,646 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.9 pTM=0.46 ipTM=0.182 tol=3.16
2024-07-09 03:59:41,468 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.8 pTM=0.458 ipTM=0.178 tol=4.23
2024-07-09 04:00:06,281 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.3 pTM=0.46 ipTM=0.184 tol=3.67
2024-07-09 04:00:31,099 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.4 pTM=0.458 ipTM=0.179 tol=2.42
2024-07-09 04:00:55,928 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.2 pTM=0.461 ipTM=0.184 tol=2.13
2024-07-09 04:01:20,745 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.8 pTM=0.461 ipTM=0.182 tol=2.84
2024-07-09 04:01:45,537 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.4 pTM=0.463 ipTM=0.189 tol=3.85
2024-07-09 04:02:10,343 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.9 pTM=0.461 ipTM=0.182 tol=4.76
2024-07-09 04:02:35,132 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.4 pTM=0.466 ipTM=0.193 tol=4.3
2024-07-09 04:02:59,927 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=69.9 pTM=0.461 ipTM=0.184 tol=1.81
2024-07-09 04:03:24,731 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.2 pTM=0.46 ipTM=0.183 tol=1.78
2024-07-09 04:03:49,555 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.6 pTM=0.459 ipTM=0.18 tol=3.99
2024-07-09 04:04:14,352 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.6 pTM=0.463 ipTM=0.187 tol=2.86
2024-07-09 04:04:39,168 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.8 pTM=0.461 ipTM=0.183 tol=3.84
2024-07-09 04:05:03,961 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.3 pTM=0.462 ipTM=0.186 tol=3.13
2024-07-09 04:05:28,755 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.7 pTM=0.462 ipTM=0.183 tol=2.1
2024-07-09 04:05:53,536 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.4 pTM=0.464 ipTM=0.189 tol=2.75
2024-07-09 04:06:18,331 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.4 pTM=0.459 ipTM=0.18 tol=2.42
2024-07-09 04:06:43,112 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.1 pTM=0.462 ipTM=0.186 tol=3.46
2024-07-09 04:07:07,920 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.4 pTM=0.46 ipTM=0.182 tol=3.15
2024-07-09 04:07:07,921 alphafold2_multimer_v3_model_3_seed_000 took 769.1s (30 recycles)
2024-07-09 04:07:33,460 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.2 pTM=0.47 ipTM=0.358
2024-07-09 04:07:58,293 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.2 pTM=0.448 ipTM=0.197 tol=13.3
2024-07-09 04:08:23,095 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.6 pTM=0.445 ipTM=0.184 tol=9.01
2024-07-09 04:08:47,908 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.9 pTM=0.447 ipTM=0.167 tol=7.4
2024-07-09 04:09:12,732 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.9 pTM=0.454 ipTM=0.168 tol=4.27
2024-07-09 04:09:37,566 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.5 pTM=0.451 ipTM=0.161 tol=2.8
2024-07-09 04:10:02,375 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.8 pTM=0.458 ipTM=0.184 tol=2.05
2024-07-09 04:10:27,192 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.8 pTM=0.454 ipTM=0.166 tol=2.58
2024-07-09 04:10:52,013 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.1 pTM=0.457 ipTM=0.17 tol=2.13
2024-07-09 04:11:16,836 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.8 pTM=0.458 ipTM=0.173 tol=2.18
2024-07-09 04:11:41,654 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.4 pTM=0.459 ipTM=0.175 tol=2.15
2024-07-09 04:12:06,488 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.2 pTM=0.455 ipTM=0.166 tol=2.43
2024-07-09 04:12:31,314 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.3 pTM=0.461 ipTM=0.177 tol=1.81
2024-07-09 04:12:56,154 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.9 pTM=0.459 ipTM=0.174 tol=2.39
2024-07-09 04:13:20,972 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.5 pTM=0.465 ipTM=0.185 tol=1.58
2024-07-09 04:13:45,825 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.2 pTM=0.462 ipTM=0.185 tol=4.2
2024-07-09 04:14:10,659 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.2 pTM=0.46 ipTM=0.177 tol=2.76
2024-07-09 04:14:35,513 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.4 pTM=0.456 ipTM=0.168 tol=2.54
2024-07-09 04:15:00,352 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.6 pTM=0.458 ipTM=0.173 tol=1.67
2024-07-09 04:15:25,203 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.4 pTM=0.459 ipTM=0.175 tol=2.54
2024-07-09 04:15:50,020 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.6 pTM=0.461 ipTM=0.177 tol=1.81
2024-07-09 04:16:14,851 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.6 pTM=0.46 ipTM=0.178 tol=1.81
2024-07-09 04:16:39,679 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69 pTM=0.461 ipTM=0.178 tol=1.64
2024-07-09 04:17:04,528 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.4 pTM=0.457 ipTM=0.171 tol=2.44
2024-07-09 04:17:29,375 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.2 pTM=0.46 ipTM=0.176 tol=1.73
2024-07-09 04:17:54,226 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.5 pTM=0.457 ipTM=0.17 tol=1.67
2024-07-09 04:18:19,067 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.4 pTM=0.461 ipTM=0.178 tol=1.83
2024-07-09 04:18:43,925 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.6 pTM=0.458 ipTM=0.172 tol=1.15
2024-07-09 04:19:08,767 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.1 pTM=0.461 ipTM=0.18 tol=1.34
2024-07-09 04:19:33,637 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.1 pTM=0.457 ipTM=0.17 tol=1.96
2024-07-09 04:19:58,482 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.3 pTM=0.463 ipTM=0.195 tol=2.09
2024-07-09 04:19:58,482 alphafold2_multimer_v3_model_4_seed_000 took 769.9s (30 recycles)
2024-07-09 04:20:23,941 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.3 pTM=0.454 ipTM=0.164
2024-07-09 04:20:48,801 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.3 pTM=0.452 ipTM=0.196 tol=7
2024-07-09 04:21:13,676 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.9 pTM=0.45 ipTM=0.183 tol=6.51
2024-07-09 04:21:38,501 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.9 pTM=0.466 ipTM=0.228 tol=6.54
2024-07-09 04:22:03,327 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.6 pTM=0.457 ipTM=0.182 tol=5.72
2024-07-09 04:22:28,165 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.6 pTM=0.456 ipTM=0.171 tol=4.65
2024-07-09 04:22:53,006 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.9 pTM=0.457 ipTM=0.171 tol=2.95
2024-07-09 04:23:17,851 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.8 pTM=0.458 ipTM=0.171 tol=2.98
2024-07-09 04:23:42,699 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.9 pTM=0.458 ipTM=0.172 tol=1.96
2024-07-09 04:24:07,529 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.3 pTM=0.458 ipTM=0.174 tol=1.63
2024-07-09 04:24:32,343 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69 pTM=0.461 ipTM=0.177 tol=3.25
2024-07-09 04:24:57,165 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69 pTM=0.46 ipTM=0.177 tol=2.39
2024-07-09 04:25:22,007 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.3 pTM=0.46 ipTM=0.175 tol=2.59
2024-07-09 04:25:46,841 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.3 pTM=0.461 ipTM=0.175 tol=2.3
2024-07-09 04:26:11,663 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.3 pTM=0.461 ipTM=0.177 tol=4.19
2024-07-09 04:26:36,475 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.9 pTM=0.463 ipTM=0.177 tol=1.97
2024-07-09 04:27:01,294 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.2 pTM=0.461 ipTM=0.176 tol=3.97
2024-07-09 04:27:26,107 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.2 pTM=0.461 ipTM=0.177 tol=2.75
2024-07-09 04:27:50,928 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.1 pTM=0.46 ipTM=0.177 tol=3.7
2024-07-09 04:28:15,758 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.1 pTM=0.46 ipTM=0.177 tol=2.23
2024-07-09 04:28:40,598 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69 pTM=0.461 ipTM=0.177 tol=2.03
2024-07-09 04:29:05,434 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.8 pTM=0.461 ipTM=0.179 tol=2.72
2024-07-09 04:29:30,266 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.8 pTM=0.46 ipTM=0.176 tol=4.09
2024-07-09 04:29:55,097 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.1 pTM=0.46 ipTM=0.174 tol=6.02
2024-07-09 04:30:19,911 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.9 pTM=0.46 ipTM=0.181 tol=1.9
2024-07-09 04:30:44,723 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.4 pTM=0.459 ipTM=0.172 tol=3.88
2024-07-09 04:31:09,537 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.4 pTM=0.462 ipTM=0.177 tol=6.34
2024-07-09 04:31:34,362 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.6 pTM=0.46 ipTM=0.176 tol=2.08
2024-07-09 04:31:59,175 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.4 pTM=0.462 ipTM=0.179 tol=1.97
2024-07-09 04:32:23,990 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.2 pTM=0.463 ipTM=0.179 tol=2.39
2024-07-09 04:32:48,801 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.1 pTM=0.46 ipTM=0.177 tol=2.61
2024-07-09 04:32:48,802 alphafold2_multimer_v3_model_5_seed_000 took 769.7s (30 recycles)
2024-07-09 04:32:49,455 reranking models by 'multimer' metric
2024-07-09 04:32:52,741 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 04:34:28,359 Relaxation took 98.9s
2024-07-09 04:34:28,359 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.3 pTM=0.463 ipTM=0.195
2024-07-09 04:36:03,928 Relaxation took 95.6s
2024-07-09 04:36:03,929 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.4 pTM=0.46 ipTM=0.182
2024-07-09 04:37:23,681 Relaxation took 79.8s
2024-07-09 04:37:23,681 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.1 pTM=0.46 ipTM=0.177
2024-07-09 04:38:46,785 Relaxation took 83.1s
2024-07-09 04:38:46,785 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.4 pTM=0.453 ipTM=0.166
2024-07-09 04:40:24,713 Relaxation took 97.9s
2024-07-09 04:40:24,713 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.9 pTM=0.445 ipTM=0.162
2024-07-09 04:40:26,596 Done