2024-07-09 04:12:01,826 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 04:12:02,115 Running on GPU
2024-07-09 04:12:05,729 Found 6 citations for tools or databases
2024-07-09 04:12:05,729 Query 1/1: CGRE1_HACL2 (length 950)
2024-07-09 04:12:06,196 Sleeping for 9s. Reason: PENDING
2024-07-09 04:12:15,605 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:12:26,046 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:12:33,465 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:12:44,231 Sleeping for 5s. Reason: RUNNING
2024-07-09 04:12:49,930 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:12:56,355 Sleeping for 5s. Reason: RUNNING
2024-07-09 04:13:01,766 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:13:08,195 Sleeping for 5s. Reason: RUNNING
2024-07-09 04:13:13,814 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:13:21,245 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:13:27,670 Sleeping for 9s. Reason: RUNNING
2024-07-09 04:13:37,097 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:13:47,538 Sleeping for 9s. Reason: RUNNING
2024-07-09 04:13:56,957 Sleeping for 9s. Reason: RUNNING
2024-07-09 04:14:06,384 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:14:16,806 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:14:24,216 Sleeping for 5s. Reason: RUNNING
2024-07-09 04:14:29,641 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:14:36,068 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:14:46,993 Sleeping for 8s. Reason: PENDING
2024-07-09 04:14:55,416 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:15:03,133 Sleeping for 9s. Reason: RUNNING
2024-07-09 04:15:12,570 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:15:18,981 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:15:26,409 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:15:37,348 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:15:48,906 Sleeping for 8s. Reason: RUNNING
2024-07-09 04:15:57,829 Sleeping for 5s. Reason: RUNNING
2024-07-09 04:16:03,240 Sleeping for 8s. Reason: RUNNING
2024-07-09 04:16:11,683 Sleeping for 5s. Reason: RUNNING
2024-07-09 04:16:17,087 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:16:24,528 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:16:31,958 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:16:39,662 Sleeping for 8s. Reason: RUNNING
2024-07-09 04:16:48,082 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:17:01,818 Setting max_seq=508, max_extra_seq=2048
2024-07-09 04:19:47,459 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.6 pTM=0.663 ipTM=0.25
2024-07-09 04:20:08,087 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.9 pTM=0.669 ipTM=0.246 tol=12.7
2024-07-09 04:20:28,771 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.8 pTM=0.664 ipTM=0.246 tol=9.49
2024-07-09 04:20:49,468 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.9 pTM=0.666 ipTM=0.239 tol=4.54
2024-07-09 04:21:10,196 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.8 pTM=0.665 ipTM=0.229 tol=2.46
2024-07-09 04:21:30,945 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.8 pTM=0.667 ipTM=0.23 tol=4.02
2024-07-09 04:21:51,686 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.7 pTM=0.663 ipTM=0.23 tol=4.2
2024-07-09 04:22:12,457 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.7 pTM=0.666 ipTM=0.228 tol=4.54
2024-07-09 04:22:33,229 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.9 pTM=0.664 ipTM=0.231 tol=4.01
2024-07-09 04:22:54,017 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.7 pTM=0.667 ipTM=0.236 tol=2.4
2024-07-09 04:23:14,825 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73 pTM=0.667 ipTM=0.245 tol=2.66
2024-07-09 04:23:35,604 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.6 pTM=0.665 ipTM=0.242 tol=7.2
2024-07-09 04:23:56,369 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.5 pTM=0.663 ipTM=0.231 tol=9.61
2024-07-09 04:24:17,141 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.3 pTM=0.664 ipTM=0.223 tol=5.73
2024-07-09 04:24:37,932 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.8 pTM=0.666 ipTM=0.225 tol=3.35
2024-07-09 04:24:58,724 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.6 pTM=0.665 ipTM=0.239 tol=1.97
2024-07-09 04:25:19,523 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.8 pTM=0.666 ipTM=0.243 tol=3.26
2024-07-09 04:25:40,299 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.5 pTM=0.665 ipTM=0.255 tol=3.9
2024-07-09 04:26:01,072 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.6 pTM=0.665 ipTM=0.247 tol=3.44
2024-07-09 04:26:21,855 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.6 pTM=0.667 ipTM=0.249 tol=3.21
2024-07-09 04:26:42,639 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.6 pTM=0.664 ipTM=0.248 tol=1.97
2024-07-09 04:27:03,413 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.4 pTM=0.664 ipTM=0.245 tol=1.67
2024-07-09 04:27:24,194 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.5 pTM=0.665 ipTM=0.244 tol=1.73
2024-07-09 04:27:44,980 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.6 pTM=0.667 ipTM=0.237 tol=2.92
2024-07-09 04:28:05,762 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.4 pTM=0.664 ipTM=0.228 tol=3.34
2024-07-09 04:28:26,555 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.6 pTM=0.666 ipTM=0.231 tol=1.77
2024-07-09 04:28:47,346 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.6 pTM=0.664 ipTM=0.237 tol=1.76
2024-07-09 04:29:08,130 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.4 pTM=0.665 ipTM=0.245 tol=1.54
2024-07-09 04:29:28,917 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.7 pTM=0.666 ipTM=0.242 tol=1.82
2024-07-09 04:29:49,676 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.5 pTM=0.665 ipTM=0.238 tol=3.5
2024-07-09 04:30:10,452 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.6 pTM=0.666 ipTM=0.232 tol=3.77
2024-07-09 04:30:10,453 alphafold2_multimer_v3_model_1_seed_000 took 783.5s (30 recycles)
2024-07-09 04:30:31,742 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.4 pTM=0.664 ipTM=0.236
2024-07-09 04:30:52,523 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.6 pTM=0.668 ipTM=0.234 tol=5.89
2024-07-09 04:31:13,307 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.1 pTM=0.666 ipTM=0.236 tol=4.18
2024-07-09 04:31:34,096 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.1 pTM=0.667 ipTM=0.237 tol=1.72
2024-07-09 04:31:54,898 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.2 pTM=0.667 ipTM=0.233 tol=1.43
2024-07-09 04:32:15,709 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.2 pTM=0.667 ipTM=0.24 tol=1.86
2024-07-09 04:32:36,497 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.9 pTM=0.666 ipTM=0.238 tol=1.84
2024-07-09 04:32:57,302 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.8 pTM=0.667 ipTM=0.24 tol=3.71
2024-07-09 04:33:18,081 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.9 pTM=0.666 ipTM=0.235 tol=3.05
2024-07-09 04:33:38,878 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.9 pTM=0.667 ipTM=0.235 tol=1.8
2024-07-09 04:33:59,690 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.9 pTM=0.667 ipTM=0.239 tol=2.88
2024-07-09 04:34:20,493 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.8 pTM=0.667 ipTM=0.241 tol=4.8
2024-07-09 04:34:41,290 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.8 pTM=0.666 ipTM=0.233 tol=5.02
2024-07-09 04:35:02,106 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.1 pTM=0.665 ipTM=0.226 tol=6.78
2024-07-09 04:35:22,927 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.2 pTM=0.667 ipTM=0.239 tol=4.29
2024-07-09 04:35:43,742 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72 pTM=0.666 ipTM=0.238 tol=4.14
2024-07-09 04:36:04,560 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.2 pTM=0.667 ipTM=0.243 tol=2.62
2024-07-09 04:36:25,369 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.1 pTM=0.667 ipTM=0.251 tol=3.47
2024-07-09 04:36:46,171 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.1 pTM=0.667 ipTM=0.25 tol=2.33
2024-07-09 04:37:06,974 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.1 pTM=0.667 ipTM=0.257 tol=2.07
2024-07-09 04:37:27,780 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.1 pTM=0.666 ipTM=0.258 tol=1.67
2024-07-09 04:37:48,569 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.9 pTM=0.664 ipTM=0.251 tol=2.35
2024-07-09 04:38:09,382 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.2 pTM=0.663 ipTM=0.251 tol=3.72
2024-07-09 04:38:30,192 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.2 pTM=0.666 ipTM=0.248 tol=2.68
2024-07-09 04:38:50,997 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=72.1 pTM=0.664 ipTM=0.248 tol=2.37
2024-07-09 04:39:11,801 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.2 pTM=0.667 ipTM=0.254 tol=2
2024-07-09 04:39:32,608 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72 pTM=0.667 ipTM=0.262 tol=3.97
2024-07-09 04:39:53,425 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.2 pTM=0.665 ipTM=0.266 tol=3.21
2024-07-09 04:40:14,225 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.2 pTM=0.667 ipTM=0.261 tol=1.56
2024-07-09 04:40:35,028 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72 pTM=0.666 ipTM=0.262 tol=1.62
2024-07-09 04:40:55,824 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.9 pTM=0.666 ipTM=0.253 tol=2.37
2024-07-09 04:40:55,825 alphafold2_multimer_v3_model_2_seed_000 took 644.8s (30 recycles)
2024-07-09 04:41:17,288 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.4 pTM=0.668 ipTM=0.259
2024-07-09 04:41:38,181 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.7 pTM=0.666 ipTM=0.251 tol=11.3
2024-07-09 04:41:59,067 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.2 pTM=0.666 ipTM=0.261 tol=3.73
2024-07-09 04:42:19,947 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.2 pTM=0.667 ipTM=0.263 tol=2.93
2024-07-09 04:42:40,841 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.4 pTM=0.667 ipTM=0.265 tol=3
2024-07-09 04:43:01,756 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.5 pTM=0.669 ipTM=0.267 tol=3.04
2024-07-09 04:43:22,601 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.3 pTM=0.665 ipTM=0.268 tol=3.68
2024-07-09 04:43:43,495 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.3 pTM=0.666 ipTM=0.278 tol=2.53
2024-07-09 04:44:04,354 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.4 pTM=0.666 ipTM=0.284 tol=3.37
2024-07-09 04:44:25,265 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.5 pTM=0.667 ipTM=0.285 tol=2.9
2024-07-09 04:44:46,192 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.6 pTM=0.667 ipTM=0.299 tol=3.51
2024-07-09 04:45:07,115 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.4 pTM=0.667 ipTM=0.306 tol=2.46
2024-07-09 04:45:27,967 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.2 pTM=0.665 ipTM=0.301 tol=1.5
2024-07-09 04:45:48,824 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72 pTM=0.665 ipTM=0.305 tol=5.23
2024-07-09 04:46:09,712 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.4 pTM=0.666 ipTM=0.325 tol=2.65
2024-07-09 04:46:30,594 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.1 pTM=0.665 ipTM=0.336 tol=4.25
2024-07-09 04:46:51,478 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.6 pTM=0.667 ipTM=0.367 tol=4.54
2024-07-09 04:47:12,346 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72.2 pTM=0.666 ipTM=0.364 tol=3.45
2024-07-09 04:47:33,220 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72.4 pTM=0.666 ipTM=0.372 tol=1.96
2024-07-09 04:47:54,105 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.3 pTM=0.666 ipTM=0.373 tol=1.85
2024-07-09 04:48:15,005 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.7 pTM=0.668 ipTM=0.381 tol=2.06
2024-07-09 04:48:35,874 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.2 pTM=0.665 ipTM=0.364 tol=2.15
2024-07-09 04:48:56,714 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.3 pTM=0.664 ipTM=0.365 tol=1.67
2024-07-09 04:49:17,611 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.6 pTM=0.667 ipTM=0.375 tol=1.34
2024-07-09 04:49:38,484 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.2 pTM=0.665 ipTM=0.358 tol=1.66
2024-07-09 04:49:59,386 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72.4 pTM=0.667 ipTM=0.369 tol=1.87
2024-07-09 04:50:20,269 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.6 pTM=0.667 ipTM=0.383 tol=2.08
2024-07-09 04:50:41,168 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.5 pTM=0.667 ipTM=0.377 tol=1.83
2024-07-09 04:51:02,050 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.5 pTM=0.668 ipTM=0.374 tol=2.31
2024-07-09 04:51:22,954 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.4 pTM=0.668 ipTM=0.374 tol=2.56
2024-07-09 04:51:43,835 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.4 pTM=0.667 ipTM=0.362 tol=1.81
2024-07-09 04:51:43,836 alphafold2_multimer_v3_model_3_seed_000 took 647.5s (30 recycles)
2024-07-09 04:52:05,122 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.6 pTM=0.666 ipTM=0.194
2024-07-09 04:52:25,903 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72.2 pTM=0.661 ipTM=0.209 tol=12
2024-07-09 04:52:46,685 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72.1 pTM=0.66 ipTM=0.229 tol=4.6
2024-07-09 04:53:07,494 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.8 pTM=0.66 ipTM=0.244 tol=2.7
2024-07-09 04:53:28,312 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.8 pTM=0.66 ipTM=0.25 tol=3.47
2024-07-09 04:53:49,146 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.1 pTM=0.66 ipTM=0.258 tol=2.43
2024-07-09 04:54:09,960 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.8 pTM=0.66 ipTM=0.263 tol=2.25
2024-07-09 04:54:30,789 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.8 pTM=0.66 ipTM=0.276 tol=2.51
2024-07-09 04:54:51,620 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.8 pTM=0.66 ipTM=0.275 tol=3.27
2024-07-09 04:55:12,466 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.6 pTM=0.661 ipTM=0.268 tol=4.46
2024-07-09 04:55:33,321 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.2 pTM=0.661 ipTM=0.278 tol=7.38
2024-07-09 04:55:54,133 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.7 pTM=0.66 ipTM=0.277 tol=5.41
2024-07-09 04:56:14,952 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.7 pTM=0.659 ipTM=0.256 tol=6.11
2024-07-09 04:56:35,763 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.4 pTM=0.66 ipTM=0.256 tol=3.04
2024-07-09 04:56:56,577 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.2 pTM=0.66 ipTM=0.26 tol=6.52
2024-07-09 04:57:17,384 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.5 pTM=0.659 ipTM=0.268 tol=4.97
2024-07-09 04:57:38,223 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.3 pTM=0.661 ipTM=0.276 tol=8.36
2024-07-09 04:57:59,040 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.9 pTM=0.66 ipTM=0.281 tol=3.47
2024-07-09 04:58:19,845 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.1 pTM=0.66 ipTM=0.276 tol=5.49
2024-07-09 04:58:40,653 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.4 pTM=0.66 ipTM=0.283 tol=5.54
2024-07-09 04:59:01,474 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.8 pTM=0.66 ipTM=0.276 tol=3.67
2024-07-09 04:59:22,281 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.1 pTM=0.659 ipTM=0.273 tol=3.29
2024-07-09 04:59:43,092 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.8 pTM=0.659 ipTM=0.277 tol=2.38
2024-07-09 05:00:03,904 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.9 pTM=0.661 ipTM=0.279 tol=2.12
2024-07-09 05:00:24,724 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.8 pTM=0.659 ipTM=0.271 tol=1.55
2024-07-09 05:00:45,558 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.8 pTM=0.663 ipTM=0.29 tol=1.97
2024-07-09 05:01:06,384 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.1 pTM=0.661 ipTM=0.301 tol=2.83
2024-07-09 05:01:27,198 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.6 pTM=0.661 ipTM=0.302 tol=2.88
2024-07-09 05:01:48,017 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.2 pTM=0.662 ipTM=0.3 tol=2.37
2024-07-09 05:02:08,845 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.9 pTM=0.662 ipTM=0.308 tol=2.09
2024-07-09 05:02:29,675 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.2 pTM=0.662 ipTM=0.302 tol=1.94
2024-07-09 05:02:29,676 alphafold2_multimer_v3_model_4_seed_000 took 645.3s (30 recycles)
2024-07-09 05:02:51,060 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.9 pTM=0.659 ipTM=0.208
2024-07-09 05:03:11,958 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.2 pTM=0.657 ipTM=0.224 tol=8.66
2024-07-09 05:03:32,838 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.1 pTM=0.658 ipTM=0.229 tol=6.77
2024-07-09 05:03:53,720 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.3 pTM=0.659 ipTM=0.23 tol=4.21
2024-07-09 05:04:14,601 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.4 pTM=0.661 ipTM=0.244 tol=5.93
2024-07-09 05:04:35,495 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.6 pTM=0.661 ipTM=0.248 tol=6.25
2024-07-09 05:04:56,378 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.2 pTM=0.659 ipTM=0.252 tol=8.29
2024-07-09 05:05:17,254 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.2 pTM=0.659 ipTM=0.262 tol=3.18
2024-07-09 05:05:38,156 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.4 pTM=0.66 ipTM=0.261 tol=2.2
2024-07-09 05:05:59,047 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.4 pTM=0.661 ipTM=0.252 tol=9.36
2024-07-09 05:06:19,932 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.4 pTM=0.661 ipTM=0.255 tol=8.11
2024-07-09 05:06:40,840 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.3 pTM=0.661 ipTM=0.244 tol=6.14
2024-07-09 05:07:01,720 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.1 pTM=0.659 ipTM=0.237 tol=6.07
2024-07-09 05:07:22,606 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.2 pTM=0.661 ipTM=0.236 tol=4.89
2024-07-09 05:07:43,520 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.4 pTM=0.661 ipTM=0.24 tol=3.67
2024-07-09 05:08:04,424 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.1 pTM=0.66 ipTM=0.245 tol=3.52
2024-07-09 05:08:25,319 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.2 pTM=0.663 ipTM=0.245 tol=2.95
2024-07-09 05:08:46,212 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.2 pTM=0.662 ipTM=0.253 tol=4.72
2024-07-09 05:09:07,099 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.1 pTM=0.661 ipTM=0.25 tol=9.52
2024-07-09 05:09:27,998 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.1 pTM=0.662 ipTM=0.256 tol=11.6
2024-07-09 05:09:48,902 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.2 pTM=0.662 ipTM=0.255 tol=3.98
2024-07-09 05:10:09,802 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72 pTM=0.659 ipTM=0.247 tol=4.36
2024-07-09 05:10:30,685 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.9 pTM=0.659 ipTM=0.242 tol=11
2024-07-09 05:10:51,583 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.2 pTM=0.662 ipTM=0.248 tol=6.54
2024-07-09 05:11:12,471 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72 pTM=0.66 ipTM=0.244 tol=6.79
2024-07-09 05:11:33,355 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.3 pTM=0.663 ipTM=0.255 tol=5.1
2024-07-09 05:11:54,259 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.4 pTM=0.662 ipTM=0.273 tol=5.95
2024-07-09 05:12:15,173 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.4 pTM=0.663 ipTM=0.275 tol=6.93
2024-07-09 05:12:36,063 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.2 pTM=0.662 ipTM=0.267 tol=7.69
2024-07-09 05:12:56,964 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.6 pTM=0.663 ipTM=0.265 tol=4.61
2024-07-09 05:13:17,848 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.2 pTM=0.661 ipTM=0.252 tol=3.24
2024-07-09 05:13:17,848 alphafold2_multimer_v3_model_5_seed_000 took 647.6s (30 recycles)
2024-07-09 05:13:18,402 reranking models by 'multimer' metric
2024-07-09 05:13:21,645 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 05:14:20,709 Relaxation took 62.3s
2024-07-09 05:14:20,709 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.4 pTM=0.667 ipTM=0.362
2024-07-09 05:15:42,633 Relaxation took 81.9s
2024-07-09 05:15:42,633 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.2 pTM=0.662 ipTM=0.302
2024-07-09 05:16:46,047 Relaxation took 63.4s
2024-07-09 05:16:46,047 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.9 pTM=0.666 ipTM=0.253
2024-07-09 05:17:44,469 Relaxation took 58.4s
2024-07-09 05:17:44,469 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.2 pTM=0.661 ipTM=0.252
2024-07-09 05:18:39,831 Relaxation took 55.4s
2024-07-09 05:18:39,831 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.6 pTM=0.666 ipTM=0.232
2024-07-09 05:18:41,464 Done