2024-07-09 04:40:50,974 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 04:40:51,292 Running on GPU
2024-07-09 04:40:53,719 Found 6 citations for tools or databases
2024-07-09 04:40:53,719 Query 1/1: CIAO1_MC5R (length 664)
2024-07-09 04:40:54,171 Sleeping for 8s. Reason: PENDING
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2024-07-09 04:45:32,524 Setting max_seq=508, max_extra_seq=2048
2024-07-09 04:47:34,368 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76 pTM=0.56 ipTM=0.198
2024-07-09 04:47:42,846 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=76.4 pTM=0.561 ipTM=0.194 tol=1.84
2024-07-09 04:47:51,351 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=76.4 pTM=0.556 ipTM=0.182 tol=2.15
2024-07-09 04:47:59,880 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=76.8 pTM=0.554 ipTM=0.204 tol=1.23
2024-07-09 04:48:08,399 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=76.7 pTM=0.556 ipTM=0.23 tol=1.15
2024-07-09 04:48:16,941 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77 pTM=0.559 ipTM=0.223 tol=0.777
2024-07-09 04:48:25,471 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=76.9 pTM=0.559 ipTM=0.238 tol=1.49
2024-07-09 04:48:34,029 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=77.8 pTM=0.558 ipTM=0.229 tol=1.79
2024-07-09 04:48:42,588 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.5 pTM=0.56 ipTM=0.283 tol=0.473
2024-07-09 04:48:42,588 alphafold2_multimer_v3_model_1_seed_000 took 184.9s (8 recycles)
2024-07-09 04:48:51,436 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77 pTM=0.571 ipTM=0.225
2024-07-09 04:49:00,014 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78.1 pTM=0.559 ipTM=0.188 tol=2.98
2024-07-09 04:49:08,593 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.9 pTM=0.554 ipTM=0.17 tol=2.76
2024-07-09 04:49:17,206 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78.3 pTM=0.556 ipTM=0.262 tol=2.28
2024-07-09 04:49:25,810 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=79.1 pTM=0.557 ipTM=0.263 tol=2.18
2024-07-09 04:49:34,387 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=79 pTM=0.562 ipTM=0.3 tol=1.1
2024-07-09 04:49:42,979 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=79.2 pTM=0.562 ipTM=0.273 tol=1.11
2024-07-09 04:49:51,574 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79.6 pTM=0.561 ipTM=0.284 tol=0.265
2024-07-09 04:49:51,575 alphafold2_multimer_v3_model_2_seed_000 took 68.7s (7 recycles)
2024-07-09 04:50:00,464 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.5 pTM=0.546 ipTM=0.162
2024-07-09 04:50:09,036 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.6 pTM=0.564 ipTM=0.203 tol=3.95
2024-07-09 04:50:17,643 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.8 pTM=0.559 ipTM=0.268 tol=4.18
2024-07-09 04:50:26,239 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=75.4 pTM=0.568 ipTM=0.259 tol=2.43
2024-07-09 04:50:34,830 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=76.1 pTM=0.57 ipTM=0.225 tol=1.59
2024-07-09 04:50:43,434 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.2 pTM=0.569 ipTM=0.219 tol=0.976
2024-07-09 04:50:52,028 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=76.4 pTM=0.571 ipTM=0.219 tol=0.91
2024-07-09 04:51:00,628 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=76.9 pTM=0.574 ipTM=0.228 tol=1.08
2024-07-09 04:51:09,228 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=76.9 pTM=0.574 ipTM=0.214 tol=0.535
2024-07-09 04:51:17,842 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=76.9 pTM=0.574 ipTM=0.22 tol=0.769
2024-07-09 04:51:26,435 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=76.8 pTM=0.576 ipTM=0.214 tol=0.825
2024-07-09 04:51:35,033 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.2 pTM=0.585 ipTM=0.222 tol=1.23
2024-07-09 04:51:43,631 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77.3 pTM=0.577 ipTM=0.224 tol=1.35
2024-07-09 04:51:52,224 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=76.9 pTM=0.573 ipTM=0.222 tol=0.412
2024-07-09 04:51:52,224 alphafold2_multimer_v3_model_3_seed_000 took 120.4s (13 recycles)
2024-07-09 04:52:01,119 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.8 pTM=0.563 ipTM=0.19
2024-07-09 04:52:09,729 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=76.4 pTM=0.567 ipTM=0.297 tol=6.32
2024-07-09 04:52:18,331 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.4 pTM=0.57 ipTM=0.306 tol=1.46
2024-07-09 04:52:26,948 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=77.8 pTM=0.573 ipTM=0.259 tol=0.44
2024-07-09 04:52:26,949 alphafold2_multimer_v3_model_4_seed_000 took 34.4s (3 recycles)
2024-07-09 04:52:35,848 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=74.4 pTM=0.584 ipTM=0.25
2024-07-09 04:52:44,472 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.5 pTM=0.578 ipTM=0.25 tol=8.9
2024-07-09 04:52:53,099 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.9 pTM=0.575 ipTM=0.344 tol=2.55
2024-07-09 04:53:01,731 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.8 pTM=0.574 ipTM=0.221 tol=1.25
2024-07-09 04:53:10,338 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=76.2 pTM=0.577 ipTM=0.277 tol=0.955
2024-07-09 04:53:18,968 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=76.7 pTM=0.577 ipTM=0.226 tol=0.688
2024-07-09 04:53:27,606 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=76.8 pTM=0.587 ipTM=0.22 tol=0.853
2024-07-09 04:53:36,244 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=77.4 pTM=0.583 ipTM=0.238 tol=0.477
2024-07-09 04:53:36,245 alphafold2_multimer_v3_model_5_seed_000 took 69.0s (7 recycles)
2024-07-09 04:53:36,527 reranking models by 'multimer' metric
2024-07-09 04:53:38,489 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 04:53:59,826 Relaxation took 23.3s
2024-07-09 04:53:59,826 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=79.6 pTM=0.561 ipTM=0.284
2024-07-09 04:54:37,904 Relaxation took 38.1s
2024-07-09 04:54:37,904 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=77.5 pTM=0.56 ipTM=0.283
2024-07-09 04:54:57,509 Relaxation took 19.6s
2024-07-09 04:54:57,509 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.8 pTM=0.573 ipTM=0.259
2024-07-09 04:55:17,796 Relaxation took 20.3s
2024-07-09 04:55:17,796 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=77.4 pTM=0.583 ipTM=0.238
2024-07-09 04:55:36,253 Relaxation took 18.5s
2024-07-09 04:55:36,253 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.9 pTM=0.573 ipTM=0.222
2024-07-09 04:55:37,473 Done