2024-07-09 04:46:11,481 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 04:46:11,831 Running on GPU
2024-07-09 04:46:15,817 Found 6 citations for tools or databases
2024-07-09 04:46:15,818 Query 1/1: CIDEC_MLH3 (length 1691)
2024-07-09 04:46:16,272 Sleeping for 7s. Reason: PENDING
2024-07-09 04:46:23,690 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:46:31,475 Sleeping for 5s. Reason: RUNNING
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2024-07-09 04:46:47,322 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:46:53,738 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:47:01,174 Sleeping for 8s. Reason: RUNNING
2024-07-09 04:47:09,597 Sleeping for 5s. Reason: RUNNING
2024-07-09 04:47:15,017 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:47:25,433 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:47:31,991 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:47:39,407 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:47:46,824 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:47:54,257 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:48:00,669 Sleeping for 8s. Reason: RUNNING
2024-07-09 04:48:09,106 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:48:16,520 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:48:26,945 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:48:37,370 Sleeping for 9s. Reason: RUNNING
2024-07-09 04:48:46,809 Sleeping for 9s. Reason: RUNNING
2024-07-09 04:49:08,843 Sleeping for 5s. Reason: PENDING
2024-07-09 04:49:14,262 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:49:21,673 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:49:29,133 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:49:35,557 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:49:42,001 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:49:52,423 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:49:59,842 Sleeping for 8s. Reason: RUNNING
2024-07-09 04:50:08,278 Sleeping for 6s. Reason: RUNNING
2024-07-09 04:50:15,046 Sleeping for 7s. Reason: RUNNING
2024-07-09 04:50:22,469 Sleeping for 5s. Reason: RUNNING
2024-07-09 04:50:27,909 Sleeping for 8s. Reason: RUNNING
2024-07-09 04:50:36,361 Sleeping for 10s. Reason: RUNNING
2024-07-09 04:50:52,040 Setting max_seq=508, max_extra_seq=2048
2024-07-09 04:55:12,395 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=44.1 pTM=0.348 ipTM=0.214
2024-07-09 04:56:46,672 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=44.1 pTM=0.338 ipTM=0.223 tol=15.9
2024-07-09 04:58:21,131 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=43.8 pTM=0.336 ipTM=0.225 tol=12.7
2024-07-09 04:59:55,563 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=43.3 pTM=0.337 ipTM=0.226 tol=13.4
2024-07-09 05:01:29,949 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.1 pTM=0.34 ipTM=0.233 tol=8.91
2024-07-09 05:03:04,351 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44 pTM=0.338 ipTM=0.223 tol=9.68
2024-07-09 05:04:38,759 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=44.2 pTM=0.339 ipTM=0.223 tol=7.12
2024-07-09 05:06:13,201 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=44.5 pTM=0.338 ipTM=0.223 tol=10.4
2024-07-09 05:07:47,589 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44.2 pTM=0.339 ipTM=0.224 tol=11.3
2024-07-09 05:09:21,977 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=44.3 pTM=0.339 ipTM=0.221 tol=4.34
2024-07-09 05:10:56,387 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=44.3 pTM=0.337 ipTM=0.218 tol=11.2
2024-07-09 05:12:30,793 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=44.2 pTM=0.337 ipTM=0.218 tol=6.64
2024-07-09 05:14:05,185 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=44 pTM=0.336 ipTM=0.218 tol=6.25
2024-07-09 05:15:39,573 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=44.4 pTM=0.336 ipTM=0.219 tol=10.9
2024-07-09 05:17:13,873 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=44.3 pTM=0.337 ipTM=0.219 tol=6.52
2024-07-09 05:18:48,261 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=44.5 pTM=0.336 ipTM=0.217 tol=6.08
2024-07-09 05:20:22,708 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=44.5 pTM=0.336 ipTM=0.217 tol=10.2
2024-07-09 05:21:57,179 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=44.6 pTM=0.337 ipTM=0.221 tol=8.29
2024-07-09 05:23:31,647 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=44.5 pTM=0.337 ipTM=0.218 tol=6.61
2024-07-09 05:25:06,100 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=44.5 pTM=0.336 ipTM=0.218 tol=4.57
2024-07-09 05:26:40,588 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=44.5 pTM=0.337 ipTM=0.218 tol=4.12
2024-07-09 05:28:15,006 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=44.7 pTM=0.336 ipTM=0.218 tol=5.05
2024-07-09 05:29:49,414 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=44.5 pTM=0.336 ipTM=0.219 tol=10.7
2024-07-09 05:31:23,898 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=44.7 pTM=0.337 ipTM=0.22 tol=9
2024-07-09 05:32:58,316 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=44.6 pTM=0.337 ipTM=0.221 tol=4.18
2024-07-09 05:34:32,746 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45 pTM=0.337 ipTM=0.223 tol=4
2024-07-09 05:36:07,156 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=44.8 pTM=0.337 ipTM=0.222 tol=4.16
2024-07-09 05:37:41,611 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=44.8 pTM=0.336 ipTM=0.22 tol=4.57
2024-07-09 05:39:16,074 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=44.6 pTM=0.337 ipTM=0.222 tol=9.28
2024-07-09 05:40:50,543 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=44.7 pTM=0.336 ipTM=0.217 tol=11.1
2024-07-09 05:42:25,026 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=44.8 pTM=0.335 ipTM=0.215 tol=8.77
2024-07-09 05:42:25,028 alphafold2_multimer_v3_model_1_seed_000 took 3088.0s (30 recycles)
2024-07-09 05:44:00,879 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.3 pTM=0.348 ipTM=0.205
2024-07-09 05:45:35,281 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46 pTM=0.343 ipTM=0.207 tol=20.9
2024-07-09 05:47:09,719 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=45.5 pTM=0.343 ipTM=0.213 tol=12
2024-07-09 05:48:44,129 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45.6 pTM=0.342 ipTM=0.213 tol=8.55
2024-07-09 05:50:18,488 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=45.7 pTM=0.342 ipTM=0.217 tol=6.75
2024-07-09 05:51:52,922 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=45.6 pTM=0.341 ipTM=0.221 tol=7.38
2024-07-09 05:53:27,361 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=45.8 pTM=0.342 ipTM=0.215 tol=7.57
2024-07-09 05:55:01,840 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=45.9 pTM=0.341 ipTM=0.216 tol=7.62
2024-07-09 05:56:36,323 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=45.7 pTM=0.341 ipTM=0.218 tol=9.53
2024-07-09 05:58:10,704 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=45.7 pTM=0.34 ipTM=0.219 tol=11.8
2024-07-09 05:59:45,096 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=45.9 pTM=0.341 ipTM=0.217 tol=8.96
2024-07-09 06:01:19,507 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46 pTM=0.341 ipTM=0.219 tol=4.65
2024-07-09 06:02:53,942 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46 pTM=0.341 ipTM=0.219 tol=8.03
2024-07-09 06:04:28,370 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=46 pTM=0.342 ipTM=0.218 tol=6.96
2024-07-09 06:06:02,767 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=45.8 pTM=0.342 ipTM=0.216 tol=7.21
2024-07-09 06:07:37,167 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=46 pTM=0.342 ipTM=0.212 tol=3.65
2024-07-09 06:09:11,592 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=46.1 pTM=0.342 ipTM=0.212 tol=3.8
2024-07-09 06:10:46,045 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=46.3 pTM=0.342 ipTM=0.212 tol=4.97
2024-07-09 06:12:20,463 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=46 pTM=0.342 ipTM=0.21 tol=3.35
2024-07-09 06:13:54,911 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46 pTM=0.341 ipTM=0.208 tol=6.4
2024-07-09 06:15:29,330 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=45.9 pTM=0.341 ipTM=0.214 tol=6.04
2024-07-09 06:17:03,769 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=45.8 pTM=0.341 ipTM=0.216 tol=5.58
2024-07-09 06:18:38,203 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=46 pTM=0.341 ipTM=0.212 tol=5.01
2024-07-09 06:20:12,618 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46 pTM=0.341 ipTM=0.214 tol=3.33
2024-07-09 06:21:47,063 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=46 pTM=0.341 ipTM=0.208 tol=3.87
2024-07-09 06:23:21,497 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.1 pTM=0.341 ipTM=0.212 tol=5.9
2024-07-09 06:24:55,942 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=46.2 pTM=0.341 ipTM=0.211 tol=3.51
2024-07-09 06:26:30,398 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=46.1 pTM=0.34 ipTM=0.211 tol=4.77
2024-07-09 06:28:04,825 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=45.8 pTM=0.34 ipTM=0.216 tol=5.93
2024-07-09 06:29:39,178 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.2 pTM=0.341 ipTM=0.212 tol=3.18
2024-07-09 06:31:13,474 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=46.2 pTM=0.34 ipTM=0.213 tol=5.09
2024-07-09 06:31:13,476 alphafold2_multimer_v3_model_2_seed_000 took 2926.8s (30 recycles)
2024-07-09 06:32:49,561 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45 pTM=0.382 ipTM=0.281
2024-07-09 06:34:23,923 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=44.6 pTM=0.359 ipTM=0.322 tol=18.1
2024-07-09 06:35:58,353 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45 pTM=0.354 ipTM=0.247 tol=12.3
2024-07-09 06:37:32,785 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=45.2 pTM=0.356 ipTM=0.342 tol=10.1
2024-07-09 06:39:07,233 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=44.9 pTM=0.353 ipTM=0.357 tol=11.1
2024-07-09 06:40:41,712 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45.1 pTM=0.353 ipTM=0.369 tol=12.7
2024-07-09 06:42:16,196 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45.1 pTM=0.352 ipTM=0.357 tol=7.11
2024-07-09 06:43:50,705 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45.2 pTM=0.351 ipTM=0.329 tol=6.14
2024-07-09 06:45:25,246 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.2 pTM=0.35 ipTM=0.325 tol=3.74
2024-07-09 06:46:59,726 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.1 pTM=0.352 ipTM=0.315 tol=4.78
2024-07-09 06:48:34,253 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.2 pTM=0.35 ipTM=0.329 tol=4.67
2024-07-09 06:50:08,731 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=45.1 pTM=0.351 ipTM=0.312 tol=9.41
2024-07-09 06:51:43,295 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45 pTM=0.349 ipTM=0.351 tol=7.86
2024-07-09 06:53:17,873 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45 pTM=0.352 ipTM=0.245 tol=6.61
2024-07-09 06:54:52,435 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44.7 pTM=0.353 ipTM=0.239 tol=7
2024-07-09 06:56:26,943 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.9 pTM=0.357 ipTM=0.295 tol=6.66
2024-07-09 06:58:01,441 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=44.9 pTM=0.354 ipTM=0.294 tol=6.36
2024-07-09 06:59:36,000 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45 pTM=0.356 ipTM=0.24 tol=5.55
2024-07-09 07:01:10,501 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=44.8 pTM=0.357 ipTM=0.248 tol=5.8
2024-07-09 07:02:45,030 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=44.9 pTM=0.358 ipTM=0.246 tol=6.81
2024-07-09 07:04:19,557 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44.8 pTM=0.361 ipTM=0.243 tol=4.46
2024-07-09 07:05:54,138 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=44.9 pTM=0.357 ipTM=0.247 tol=8.27
2024-07-09 07:07:28,642 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45 pTM=0.36 ipTM=0.239 tol=4.55
2024-07-09 07:09:03,157 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=45 pTM=0.36 ipTM=0.268 tol=8.48
2024-07-09 07:10:37,721 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=45 pTM=0.359 ipTM=0.243 tol=7.24
2024-07-09 07:12:12,239 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=45.1 pTM=0.359 ipTM=0.248 tol=4.39
2024-07-09 07:13:46,775 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=45.1 pTM=0.353 ipTM=0.243 tol=5.05
2024-07-09 07:15:21,322 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=45.2 pTM=0.357 ipTM=0.246 tol=4.58
2024-07-09 07:16:55,813 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.2 pTM=0.36 ipTM=0.249 tol=6.17
2024-07-09 07:18:30,311 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=45.3 pTM=0.368 ipTM=0.252 tol=11.2
2024-07-09 07:20:04,779 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.3 pTM=0.369 ipTM=0.246 tol=9.82
2024-07-09 07:20:04,781 alphafold2_multimer_v3_model_3_seed_000 took 2929.6s (30 recycles)
2024-07-09 07:21:40,861 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.9 pTM=0.398 ipTM=0.431
2024-07-09 07:23:15,190 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=43.4 pTM=0.385 ipTM=0.399 tol=15.8
2024-07-09 07:24:49,704 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=43.7 pTM=0.384 ipTM=0.397 tol=8.16
2024-07-09 07:26:24,129 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.6 pTM=0.367 ipTM=0.336 tol=7.74
2024-07-09 07:27:58,704 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=43.6 pTM=0.363 ipTM=0.331 tol=6.44
2024-07-09 07:29:33,120 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.4 pTM=0.379 ipTM=0.438 tol=5.95
2024-07-09 07:31:07,529 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=44.2 pTM=0.374 ipTM=0.376 tol=4.78
2024-07-09 07:32:41,938 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44.6 pTM=0.372 ipTM=0.38 tol=4.7
2024-07-09 07:34:16,350 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45 pTM=0.387 ipTM=0.398 tol=8.17
2024-07-09 07:35:50,743 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44.8 pTM=0.371 ipTM=0.346 tol=8.12
2024-07-09 07:37:25,164 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.9 pTM=0.379 ipTM=0.381 tol=5
2024-07-09 07:38:59,583 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=44.8 pTM=0.367 ipTM=0.351 tol=4.38
2024-07-09 07:40:34,028 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=44.8 pTM=0.379 ipTM=0.389 tol=5.18
2024-07-09 07:42:08,469 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.6 pTM=0.37 ipTM=0.344 tol=4.29
2024-07-09 07:43:42,906 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=45.4 pTM=0.386 ipTM=0.425 tol=5.06
2024-07-09 07:45:17,336 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=44.8 pTM=0.369 ipTM=0.35 tol=3.65
2024-07-09 07:46:51,819 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=45 pTM=0.372 ipTM=0.375 tol=2.9
2024-07-09 07:48:26,320 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44.7 pTM=0.368 ipTM=0.36 tol=2.58
2024-07-09 07:50:00,742 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=44.4 pTM=0.365 ipTM=0.339 tol=4.14
2024-07-09 07:51:35,199 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=44.8 pTM=0.372 ipTM=0.375 tol=4.24
2024-07-09 07:53:09,662 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=44.6 pTM=0.365 ipTM=0.348 tol=4.5
2024-07-09 07:54:44,132 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=44.6 pTM=0.373 ipTM=0.376 tol=3.55
2024-07-09 07:56:18,567 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=44.5 pTM=0.367 ipTM=0.351 tol=4.31
2024-07-09 07:57:53,154 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=44 pTM=0.356 ipTM=0.31 tol=4.86
2024-07-09 07:59:27,650 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=44.6 pTM=0.375 ipTM=0.406 tol=4.3
2024-07-09 08:01:02,144 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=44.5 pTM=0.361 ipTM=0.338 tol=10.6
2024-07-09 08:02:36,653 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=43.9 pTM=0.352 ipTM=0.362 tol=11.9
2024-07-09 08:04:11,203 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.7 pTM=0.345 ipTM=0.281 tol=5.71
2024-07-09 08:05:45,725 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.8 pTM=0.35 ipTM=0.318 tol=4.47
2024-07-09 08:07:20,190 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43.9 pTM=0.347 ipTM=0.308 tol=3.82
2024-07-09 08:08:54,704 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.9 pTM=0.344 ipTM=0.314 tol=3.63
2024-07-09 08:08:54,706 alphafold2_multimer_v3_model_4_seed_000 took 2928.2s (30 recycles)
2024-07-09 08:10:30,971 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.8 pTM=0.349 ipTM=0.193
2024-07-09 08:12:05,615 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=42.7 pTM=0.349 ipTM=0.227 tol=24.5
2024-07-09 08:13:40,353 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=43.5 pTM=0.34 ipTM=0.214 tol=18.6
2024-07-09 08:15:15,096 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=44.2 pTM=0.341 ipTM=0.219 tol=11
2024-07-09 08:16:49,767 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=45.2 pTM=0.374 ipTM=0.462 tol=19.8
2024-07-09 08:18:24,419 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=44.8 pTM=0.368 ipTM=0.408 tol=11.2
2024-07-09 08:19:59,021 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=45.1 pTM=0.377 ipTM=0.419 tol=11.2
2024-07-09 08:21:33,637 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.8 pTM=0.372 ipTM=0.386 tol=8.92
2024-07-09 08:23:08,213 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.8 pTM=0.373 ipTM=0.379 tol=12.2
2024-07-09 08:24:42,789 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44.9 pTM=0.377 ipTM=0.374 tol=14.8
2024-07-09 08:26:17,394 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=44.8 pTM=0.375 ipTM=0.368 tol=6.89
2024-07-09 08:27:51,993 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=44.6 pTM=0.375 ipTM=0.361 tol=7.65
2024-07-09 08:29:26,612 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=44.5 pTM=0.373 ipTM=0.366 tol=7.1
2024-07-09 08:31:01,231 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=44.8 pTM=0.377 ipTM=0.373 tol=6.79
2024-07-09 08:32:35,793 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=44.4 pTM=0.375 ipTM=0.365 tol=13.4
2024-07-09 08:34:10,320 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=44.6 pTM=0.381 ipTM=0.376 tol=10.7
2024-07-09 08:35:44,864 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=44.5 pTM=0.382 ipTM=0.377 tol=13.5
2024-07-09 08:37:19,376 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=44.8 pTM=0.387 ipTM=0.385 tol=11.6
2024-07-09 08:38:53,914 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=44.6 pTM=0.381 ipTM=0.37 tol=12.6
2024-07-09 08:40:28,439 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=45.2 pTM=0.389 ipTM=0.39 tol=10.5
2024-07-09 08:42:02,856 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=45.2 pTM=0.385 ipTM=0.378 tol=7.77
2024-07-09 08:43:37,329 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=45.2 pTM=0.388 ipTM=0.396 tol=7.48
2024-07-09 08:45:11,857 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=45.3 pTM=0.386 ipTM=0.373 tol=5.93
2024-07-09 08:46:46,315 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=45.5 pTM=0.392 ipTM=0.378 tol=7.3
2024-07-09 08:48:20,765 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.6 pTM=0.386 ipTM=0.387 tol=7.06
2024-07-09 08:49:55,210 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=45.7 pTM=0.394 ipTM=0.401 tol=4.91
2024-07-09 08:51:29,676 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45.5 pTM=0.386 ipTM=0.375 tol=5.73
2024-07-09 08:53:04,140 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.8 pTM=0.396 ipTM=0.396 tol=4.79
2024-07-09 08:54:38,577 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=45.6 pTM=0.384 ipTM=0.408 tol=6.55
2024-07-09 08:56:13,033 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=45.8 pTM=0.398 ipTM=0.395 tol=9.17
2024-07-09 08:57:47,452 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=45.5 pTM=0.385 ipTM=0.385 tol=9.12
2024-07-09 08:57:47,454 alphafold2_multimer_v3_model_5_seed_000 took 2931.1s (30 recycles)
2024-07-09 08:57:49,121 reranking models by 'multimer' metric
2024-07-09 08:57:51,210 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 09:01:21,171 Relaxation took 212.0s
2024-07-09 09:01:21,171 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=45.5 pTM=0.385 ipTM=0.385
2024-07-09 09:04:24,357 Relaxation took 183.2s
2024-07-09 09:04:24,357 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.9 pTM=0.344 ipTM=0.314
2024-07-09 09:09:00,200 Relaxation took 275.8s
2024-07-09 09:09:00,200 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.3 pTM=0.369 ipTM=0.246
2024-07-09 09:13:38,569 Relaxation took 278.4s
2024-07-09 09:13:38,569 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=44.8 pTM=0.335 ipTM=0.215
2024-07-09 09:17:50,611 Relaxation took 252.0s
2024-07-09 09:17:50,612 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=46.2 pTM=0.34 ipTM=0.213
2024-07-09 09:17:54,425 Done