2024-07-09 05:19:54,028 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 05:19:54,360 Running on GPU
2024-07-09 05:19:55,426 Found 6 citations for tools or databases
2024-07-09 05:19:55,426 Query 1/1: CLN6_CP089 (length 713)
2024-07-09 05:19:55,855 Sleeping for 8s. Reason: PENDING
2024-07-09 05:20:04,301 Sleeping for 6s. Reason: RUNNING
2024-07-09 05:20:10,894 Sleeping for 6s. Reason: RUNNING
2024-07-09 05:20:17,316 Sleeping for 7s. Reason: RUNNING
2024-07-09 05:20:24,733 Sleeping for 5s. Reason: RUNNING
2024-07-09 05:20:30,153 Sleeping for 7s. Reason: RUNNING
2024-07-09 05:20:37,572 Sleeping for 6s. Reason: RUNNING
2024-07-09 05:20:43,997 Sleeping for 10s. Reason: RUNNING
2024-07-09 05:20:54,732 Sleeping for 7s. Reason: RUNNING
2024-07-09 05:21:02,147 Sleeping for 8s. Reason: RUNNING
2024-07-09 05:21:10,583 Sleeping for 8s. Reason: RUNNING
2024-07-09 05:21:19,004 Sleeping for 7s. Reason: RUNNING
2024-07-09 05:21:26,437 Sleeping for 9s. Reason: RUNNING
2024-07-09 05:21:37,495 Sleeping for 8s. Reason: PENDING
2024-07-09 05:21:45,936 Sleeping for 7s. Reason: RUNNING
2024-07-09 05:21:53,403 Sleeping for 6s. Reason: RUNNING
2024-07-09 05:21:59,822 Sleeping for 6s. Reason: RUNNING
2024-07-09 05:22:09,826 Setting max_seq=508, max_extra_seq=2048
2024-07-09 05:25:07,824 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.2 pTM=0.433 ipTM=0.121
2024-07-09 05:25:17,968 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.6 pTM=0.445 ipTM=0.14 tol=8.08
2024-07-09 05:25:28,126 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.9 pTM=0.45 ipTM=0.139 tol=2.61
2024-07-09 05:25:38,295 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.2 pTM=0.448 ipTM=0.139 tol=1.8
2024-07-09 05:25:48,482 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.3 pTM=0.452 ipTM=0.148 tol=3.61
2024-07-09 05:25:58,657 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.4 pTM=0.457 ipTM=0.162 tol=3.09
2024-07-09 05:26:08,838 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=71.7 pTM=0.457 ipTM=0.163 tol=2.22
2024-07-09 05:26:19,043 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=71.6 pTM=0.458 ipTM=0.166 tol=1
2024-07-09 05:26:29,263 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=71.9 pTM=0.46 ipTM=0.167 tol=1.07
2024-07-09 05:26:39,478 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.9 pTM=0.465 ipTM=0.176 tol=1.13
2024-07-09 05:26:49,700 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.9 pTM=0.462 ipTM=0.17 tol=1.3
2024-07-09 05:26:59,913 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.8 pTM=0.461 ipTM=0.172 tol=0.818
2024-07-09 05:27:10,125 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.8 pTM=0.461 ipTM=0.175 tol=1.06
2024-07-09 05:27:20,342 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.8 pTM=0.461 ipTM=0.184 tol=1.01
2024-07-09 05:27:30,582 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.1 pTM=0.461 ipTM=0.181 tol=1.47
2024-07-09 05:27:40,818 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72 pTM=0.46 ipTM=0.182 tol=1.72
2024-07-09 05:27:51,046 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.8 pTM=0.46 ipTM=0.18 tol=1.62
2024-07-09 05:28:01,273 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=71.8 pTM=0.459 ipTM=0.185 tol=1.78
2024-07-09 05:28:11,520 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72 pTM=0.463 ipTM=0.185 tol=2.01
2024-07-09 05:28:21,750 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.9 pTM=0.46 ipTM=0.179 tol=1.27
2024-07-09 05:28:31,976 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.8 pTM=0.46 ipTM=0.177 tol=1.31
2024-07-09 05:28:42,219 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.2 pTM=0.466 ipTM=0.178 tol=1.29
2024-07-09 05:28:52,456 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71.9 pTM=0.461 ipTM=0.175 tol=2.02
2024-07-09 05:29:02,690 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72 pTM=0.46 ipTM=0.183 tol=2.06
2024-07-09 05:29:12,919 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.8 pTM=0.459 ipTM=0.187 tol=0.866
2024-07-09 05:29:23,159 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71.8 pTM=0.46 ipTM=0.181 tol=0.707
2024-07-09 05:29:33,398 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.8 pTM=0.457 ipTM=0.173 tol=1.58
2024-07-09 05:29:43,628 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=71.8 pTM=0.458 ipTM=0.174 tol=1.86
2024-07-09 05:29:53,864 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=71.8 pTM=0.462 ipTM=0.181 tol=1.05
2024-07-09 05:30:04,101 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=71.8 pTM=0.462 ipTM=0.183 tol=1.14
2024-07-09 05:30:14,337 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=71.7 pTM=0.461 ipTM=0.183 tol=1.7
2024-07-09 05:30:14,338 alphafold2_multimer_v3_model_1_seed_000 took 480.1s (30 recycles)
2024-07-09 05:30:24,976 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.5 pTM=0.448 ipTM=0.128
2024-07-09 05:30:35,294 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.8 pTM=0.446 ipTM=0.126 tol=8.8
2024-07-09 05:30:45,598 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.4 pTM=0.45 ipTM=0.137 tol=12.4
2024-07-09 05:30:55,871 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.5 pTM=0.463 ipTM=0.163 tol=4.82
2024-07-09 05:31:06,138 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.2 pTM=0.458 ipTM=0.155 tol=1.66
2024-07-09 05:31:16,395 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.3 pTM=0.462 ipTM=0.169 tol=1.4
2024-07-09 05:31:26,650 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.4 pTM=0.464 ipTM=0.17 tol=0.918
2024-07-09 05:31:36,907 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.2 pTM=0.463 ipTM=0.175 tol=0.79
2024-07-09 05:31:47,179 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=72.7 pTM=0.463 ipTM=0.169 tol=1.47
2024-07-09 05:31:57,434 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=72.4 pTM=0.462 ipTM=0.173 tol=1.38
2024-07-09 05:32:07,694 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.4 pTM=0.463 ipTM=0.176 tol=1.4
2024-07-09 05:32:17,953 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.6 pTM=0.458 ipTM=0.163 tol=1.51
2024-07-09 05:32:28,200 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.4 pTM=0.46 ipTM=0.167 tol=1.46
2024-07-09 05:32:38,445 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.2 pTM=0.457 ipTM=0.164 tol=1.64
2024-07-09 05:32:48,712 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.8 pTM=0.469 ipTM=0.192 tol=1.3
2024-07-09 05:32:58,972 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.6 pTM=0.462 ipTM=0.175 tol=2.1
2024-07-09 05:33:09,217 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.5 pTM=0.471 ipTM=0.197 tol=1.63
2024-07-09 05:33:19,478 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.4 pTM=0.458 ipTM=0.168 tol=1.38
2024-07-09 05:33:29,753 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.6 pTM=0.462 ipTM=0.179 tol=2.24
2024-07-09 05:33:40,016 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.4 pTM=0.459 ipTM=0.173 tol=1.82
2024-07-09 05:33:50,271 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.9 pTM=0.453 ipTM=0.157 tol=4.35
2024-07-09 05:34:00,543 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.8 pTM=0.46 ipTM=0.17 tol=4.1
2024-07-09 05:34:10,792 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.5 pTM=0.462 ipTM=0.177 tol=1.11
2024-07-09 05:34:21,044 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.2 pTM=0.459 ipTM=0.168 tol=1.2
2024-07-09 05:34:31,291 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=72.3 pTM=0.456 ipTM=0.163 tol=1.1
2024-07-09 05:34:41,549 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.3 pTM=0.456 ipTM=0.163 tol=0.892
2024-07-09 05:34:51,786 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.2 pTM=0.455 ipTM=0.161 tol=0.588
2024-07-09 05:35:02,028 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.1 pTM=0.455 ipTM=0.164 tol=0.562
2024-07-09 05:35:12,284 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.3 pTM=0.465 ipTM=0.179 tol=0.662
2024-07-09 05:35:22,549 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.4 pTM=0.458 ipTM=0.166 tol=0.798
2024-07-09 05:35:32,794 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.2 pTM=0.451 ipTM=0.154 tol=2.12
2024-07-09 05:35:32,795 alphafold2_multimer_v3_model_2_seed_000 took 318.1s (30 recycles)
2024-07-09 05:35:43,363 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.3 pTM=0.461 ipTM=0.156
2024-07-09 05:35:53,634 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70.8 pTM=0.48 ipTM=0.195 tol=10.8
2024-07-09 05:36:03,903 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.9 pTM=0.46 ipTM=0.161 tol=3.37
2024-07-09 05:36:14,164 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.9 pTM=0.47 ipTM=0.182 tol=1.97
2024-07-09 05:36:24,420 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.1 pTM=0.472 ipTM=0.185 tol=1.1
2024-07-09 05:36:34,676 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.2 pTM=0.472 ipTM=0.182 tol=1.6
2024-07-09 05:36:44,944 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.2 pTM=0.473 ipTM=0.188 tol=0.877
2024-07-09 05:36:55,209 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.1 pTM=0.47 ipTM=0.181 tol=1.73
2024-07-09 05:37:05,477 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.4 pTM=0.469 ipTM=0.18 tol=1.29
2024-07-09 05:37:15,736 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.1 pTM=0.469 ipTM=0.181 tol=2.47
2024-07-09 05:37:26,009 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.2 pTM=0.469 ipTM=0.177 tol=1.4
2024-07-09 05:37:36,267 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.1 pTM=0.465 ipTM=0.177 tol=1.01
2024-07-09 05:37:46,533 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.2 pTM=0.464 ipTM=0.173 tol=1.38
2024-07-09 05:37:56,799 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.9 pTM=0.463 ipTM=0.176 tol=1.6
2024-07-09 05:38:07,079 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.4 pTM=0.467 ipTM=0.179 tol=2.22
2024-07-09 05:38:17,351 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.2 pTM=0.461 ipTM=0.169 tol=1.08
2024-07-09 05:38:27,625 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.1 pTM=0.464 ipTM=0.175 tol=1.38
2024-07-09 05:38:37,903 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.1 pTM=0.466 ipTM=0.176 tol=1.73
2024-07-09 05:38:48,174 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71 pTM=0.465 ipTM=0.178 tol=1.25
2024-07-09 05:38:58,446 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71 pTM=0.464 ipTM=0.176 tol=1.23
2024-07-09 05:39:08,719 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.2 pTM=0.461 ipTM=0.175 tol=1.52
2024-07-09 05:39:19,001 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.2 pTM=0.46 ipTM=0.172 tol=1.18
2024-07-09 05:39:29,267 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.1 pTM=0.463 ipTM=0.175 tol=1.38
2024-07-09 05:39:39,534 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.2 pTM=0.46 ipTM=0.172 tol=1.08
2024-07-09 05:39:49,825 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.1 pTM=0.461 ipTM=0.175 tol=1.39
2024-07-09 05:40:00,107 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.2 pTM=0.461 ipTM=0.176 tol=1.15
2024-07-09 05:40:10,376 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71 pTM=0.458 ipTM=0.173 tol=0.922
2024-07-09 05:40:20,645 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.9 pTM=0.455 ipTM=0.169 tol=0.732
2024-07-09 05:40:30,926 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.1 pTM=0.463 ipTM=0.18 tol=0.933
2024-07-09 05:40:41,199 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.1 pTM=0.46 ipTM=0.175 tol=1.07
2024-07-09 05:40:51,464 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71 pTM=0.458 ipTM=0.173 tol=1.65
2024-07-09 05:40:51,465 alphafold2_multimer_v3_model_3_seed_000 took 318.3s (30 recycles)
2024-07-09 05:41:02,067 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.8 pTM=0.479 ipTM=0.175
2024-07-09 05:41:12,353 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.6 pTM=0.474 ipTM=0.16 tol=8.58
2024-07-09 05:41:22,631 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72.1 pTM=0.459 ipTM=0.151 tol=2.4
2024-07-09 05:41:32,909 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.1 pTM=0.457 ipTM=0.143 tol=2.89
2024-07-09 05:41:43,178 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.9 pTM=0.458 ipTM=0.15 tol=1.94
2024-07-09 05:41:53,444 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.1 pTM=0.459 ipTM=0.148 tol=1.41
2024-07-09 05:42:03,718 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.9 pTM=0.456 ipTM=0.145 tol=1.04
2024-07-09 05:42:13,992 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.8 pTM=0.455 ipTM=0.14 tol=2.07
2024-07-09 05:42:24,279 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.9 pTM=0.455 ipTM=0.142 tol=2.12
2024-07-09 05:42:34,558 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.5 pTM=0.468 ipTM=0.169 tol=20.3
2024-07-09 05:42:44,834 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.8 pTM=0.467 ipTM=0.168 tol=4.82
2024-07-09 05:42:55,110 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.9 pTM=0.459 ipTM=0.151 tol=3.05
2024-07-09 05:43:05,373 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.6 pTM=0.459 ipTM=0.154 tol=5.39
2024-07-09 05:43:15,632 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.5 pTM=0.462 ipTM=0.163 tol=4.05
2024-07-09 05:43:25,886 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.9 pTM=0.475 ipTM=0.193 tol=2.2
2024-07-09 05:43:36,140 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72 pTM=0.464 ipTM=0.169 tol=2.03
2024-07-09 05:43:46,406 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.1 pTM=0.484 ipTM=0.209 tol=2.31
2024-07-09 05:43:56,665 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.8 pTM=0.467 ipTM=0.173 tol=1.48
2024-07-09 05:44:06,928 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.9 pTM=0.481 ipTM=0.205 tol=2.71
2024-07-09 05:44:17,196 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72 pTM=0.465 ipTM=0.178 tol=2.06
2024-07-09 05:44:27,452 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72 pTM=0.484 ipTM=0.208 tol=2.99
2024-07-09 05:44:37,728 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.2 pTM=0.473 ipTM=0.187 tol=4.28
2024-07-09 05:44:47,992 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72 pTM=0.476 ipTM=0.19 tol=3.92
2024-07-09 05:44:58,234 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.2 pTM=0.482 ipTM=0.194 tol=2.88
2024-07-09 05:45:08,487 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.6 pTM=0.486 ipTM=0.207 tol=3.27
2024-07-09 05:45:18,743 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72 pTM=0.477 ipTM=0.18 tol=1.32
2024-07-09 05:45:28,997 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.9 pTM=0.491 ipTM=0.213 tol=1.13
2024-07-09 05:45:39,244 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=72.2 pTM=0.474 ipTM=0.177 tol=1.02
2024-07-09 05:45:49,508 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.1 pTM=0.496 ipTM=0.217 tol=1.53
2024-07-09 05:45:59,759 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.4 pTM=0.477 ipTM=0.182 tol=1.17
2024-07-09 05:46:10,016 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.9 pTM=0.487 ipTM=0.202 tol=1.38
2024-07-09 05:46:10,016 alphafold2_multimer_v3_model_4_seed_000 took 318.2s (30 recycles)
2024-07-09 05:46:20,597 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.9 pTM=0.509 ipTM=0.271
2024-07-09 05:46:30,866 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=70.1 pTM=0.501 ipTM=0.252 tol=7.02
2024-07-09 05:46:41,142 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.5 pTM=0.485 ipTM=0.208 tol=3.17
2024-07-09 05:46:51,415 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71 pTM=0.484 ipTM=0.213 tol=1.88
2024-07-09 05:47:01,687 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.7 pTM=0.49 ipTM=0.227 tol=1.39
2024-07-09 05:47:11,957 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.7 pTM=0.481 ipTM=0.205 tol=2.94
2024-07-09 05:47:22,226 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.6 pTM=0.484 ipTM=0.218 tol=1.31
2024-07-09 05:47:32,492 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.7 pTM=0.484 ipTM=0.215 tol=1.97
2024-07-09 05:47:42,777 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.1 pTM=0.481 ipTM=0.208 tol=1.71
2024-07-09 05:47:53,056 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.9 pTM=0.483 ipTM=0.213 tol=2.34
2024-07-09 05:48:03,336 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.1 pTM=0.483 ipTM=0.213 tol=1.19
2024-07-09 05:48:13,600 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.9 pTM=0.481 ipTM=0.206 tol=2.08
2024-07-09 05:48:23,874 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.9 pTM=0.481 ipTM=0.207 tol=1.95
2024-07-09 05:48:34,146 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.9 pTM=0.48 ipTM=0.204 tol=2.96
2024-07-09 05:48:44,435 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.1 pTM=0.483 ipTM=0.213 tol=1.37
2024-07-09 05:48:54,712 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.1 pTM=0.479 ipTM=0.203 tol=2.12
2024-07-09 05:49:04,986 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.1 pTM=0.487 ipTM=0.22 tol=0.878
2024-07-09 05:49:15,262 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71 pTM=0.481 ipTM=0.203 tol=1.99
2024-07-09 05:49:25,554 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.9 pTM=0.487 ipTM=0.22 tol=3.4
2024-07-09 05:49:35,831 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.9 pTM=0.482 ipTM=0.208 tol=3.08
2024-07-09 05:49:46,101 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.8 pTM=0.487 ipTM=0.219 tol=1.2
2024-07-09 05:49:56,372 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.2 pTM=0.479 ipTM=0.204 tol=0.819
2024-07-09 05:50:06,639 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.8 pTM=0.486 ipTM=0.215 tol=7.8
2024-07-09 05:50:16,911 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.1 pTM=0.482 ipTM=0.209 tol=4.72
2024-07-09 05:50:27,172 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.8 pTM=0.483 ipTM=0.212 tol=2.79
2024-07-09 05:50:37,443 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71 pTM=0.481 ipTM=0.208 tol=2
2024-07-09 05:50:47,714 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.8 pTM=0.481 ipTM=0.21 tol=1.81
2024-07-09 05:50:57,987 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71 pTM=0.482 ipTM=0.209 tol=1.54
2024-07-09 05:51:08,266 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71 pTM=0.486 ipTM=0.216 tol=2.33
2024-07-09 05:51:18,532 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.9 pTM=0.481 ipTM=0.205 tol=6.02
2024-07-09 05:51:28,802 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.9 pTM=0.485 ipTM=0.218 tol=5.08
2024-07-09 05:51:28,802 alphafold2_multimer_v3_model_5_seed_000 took 318.5s (30 recycles)
2024-07-09 05:51:29,126 reranking models by 'multimer' metric
2024-07-09 05:51:31,254 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 05:52:24,533 Relaxation took 55.4s
2024-07-09 05:52:24,534 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.9 pTM=0.485 ipTM=0.218
2024-07-09 05:52:59,086 Relaxation took 34.6s
2024-07-09 05:52:59,087 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.9 pTM=0.487 ipTM=0.202
2024-07-09 05:53:44,584 Relaxation took 45.5s
2024-07-09 05:53:44,584 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=71.7 pTM=0.461 ipTM=0.183
2024-07-09 05:54:29,891 Relaxation took 45.3s
2024-07-09 05:54:29,892 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71 pTM=0.458 ipTM=0.173
2024-07-09 05:55:24,672 Relaxation took 54.8s
2024-07-09 05:55:24,672 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.2 pTM=0.451 ipTM=0.154
2024-07-09 05:55:25,943 Done