2024-07-09 05:58:00,239 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 05:58:00,552 Running on GPU
2024-07-09 05:58:04,270 Found 6 citations for tools or databases
2024-07-09 05:58:04,270 Query 1/1: CMA1A_MTMRD (length 2103)
2024-07-09 05:58:04,729 Sleeping for 6s. Reason: PENDING
2024-07-09 05:58:11,142 Sleeping for 6s. Reason: RUNNING
2024-07-09 05:58:18,711 Sleeping for 8s. Reason: RUNNING
2024-07-09 05:58:27,134 Sleeping for 7s. Reason: RUNNING
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2024-07-09 05:58:43,013 Sleeping for 7s. Reason: RUNNING
2024-07-09 05:58:50,599 Sleeping for 6s. Reason: RUNNING
2024-07-09 05:58:57,005 Sleeping for 10s. Reason: RUNNING
2024-07-09 05:59:07,429 Sleeping for 5s. Reason: RUNNING
2024-07-09 05:59:12,841 Sleeping for 7s. Reason: RUNNING
2024-07-09 05:59:20,248 Sleeping for 7s. Reason: RUNNING
2024-07-09 05:59:27,682 Sleeping for 6s. Reason: RUNNING
2024-07-09 05:59:34,090 Sleeping for 5s. Reason: RUNNING
2024-07-09 05:59:39,511 Sleeping for 6s. Reason: RUNNING
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2024-07-09 05:59:53,965 Sleeping for 8s. Reason: RUNNING
2024-07-09 06:00:02,374 Sleeping for 5s. Reason: RUNNING
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2024-07-09 06:00:36,436 Sleeping for 10s. Reason: RUNNING
2024-07-09 06:00:46,861 Sleeping for 9s. Reason: RUNNING
2024-07-09 06:00:56,306 Sleeping for 8s. Reason: RUNNING
2024-07-09 06:01:04,738 Sleeping for 6s. Reason: RUNNING
2024-07-09 06:01:11,139 Sleeping for 7s. Reason: RUNNING
2024-07-09 06:01:28,400 Sleeping for 7s. Reason: PENDING
2024-07-09 06:01:35,826 Sleeping for 5s. Reason: RUNNING
2024-07-09 06:01:41,243 Sleeping for 6s. Reason: RUNNING
2024-07-09 06:01:47,667 Sleeping for 9s. Reason: RUNNING
2024-07-09 06:01:57,092 Sleeping for 9s. Reason: RUNNING
2024-07-09 06:02:06,528 Sleeping for 7s. Reason: RUNNING
2024-07-09 06:02:13,963 Sleeping for 5s. Reason: RUNNING
2024-07-09 06:02:19,405 Sleeping for 10s. Reason: RUNNING
2024-07-09 06:02:29,817 Sleeping for 10s. Reason: RUNNING
2024-07-09 06:02:40,242 Sleeping for 5s. Reason: RUNNING
2024-07-09 06:02:45,651 Sleeping for 8s. Reason: RUNNING
2024-07-09 06:02:54,073 Sleeping for 6s. Reason: RUNNING
2024-07-09 06:03:00,504 Sleeping for 7s. Reason: RUNNING
2024-07-09 06:03:07,914 Sleeping for 9s. Reason: RUNNING
2024-07-09 06:03:17,336 Sleeping for 8s. Reason: RUNNING
2024-07-09 06:03:26,894 Sleeping for 8s. Reason: RUNNING
2024-07-09 06:03:35,473 Sleeping for 5s. Reason: RUNNING
2024-07-09 06:03:40,890 Sleeping for 10s. Reason: RUNNING
2024-07-09 06:03:51,335 Sleeping for 5s. Reason: RUNNING
2024-07-09 06:03:56,800 Sleeping for 9s. Reason: RUNNING
2024-07-09 06:04:06,215 Sleeping for 7s. Reason: RUNNING
2024-07-09 06:04:13,660 Sleeping for 7s. Reason: RUNNING
2024-07-09 06:04:21,080 Sleeping for 10s. Reason: RUNNING
2024-07-09 06:04:31,856 Sleeping for 7s. Reason: RUNNING
2024-07-09 06:04:39,293 Sleeping for 10s. Reason: RUNNING
2024-07-09 06:04:49,739 Sleeping for 6s. Reason: RUNNING
2024-07-09 06:04:56,168 Sleeping for 5s. Reason: RUNNING
2024-07-09 06:05:10,852 Setting max_seq=508, max_extra_seq=2048
2024-07-09 06:11:08,936 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.4 pTM=0.488 ipTM=0.256
2024-07-09 06:14:09,201 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.4 pTM=0.505 ipTM=0.272 tol=8.47
2024-07-09 06:17:09,374 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.7 pTM=0.498 ipTM=0.269 tol=5.05
2024-07-09 06:20:09,605 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.6 pTM=0.495 ipTM=0.264 tol=2.43
2024-07-09 06:23:09,856 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.6 pTM=0.491 ipTM=0.264 tol=2.18
2024-07-09 06:26:10,067 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.4 pTM=0.49 ipTM=0.273 tol=1.74
2024-07-09 06:29:10,308 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.2 pTM=0.487 ipTM=0.274 tol=1.78
2024-07-09 06:32:10,514 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.4 pTM=0.485 ipTM=0.278 tol=1.64
2024-07-09 06:35:10,755 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.2 pTM=0.486 ipTM=0.274 tol=1.61
2024-07-09 06:38:11,020 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.6 pTM=0.485 ipTM=0.266 tol=1.52
2024-07-09 06:41:11,260 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.6 pTM=0.486 ipTM=0.269 tol=1.42
2024-07-09 06:44:11,493 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.4 pTM=0.486 ipTM=0.274 tol=1.17
2024-07-09 06:47:11,751 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.2 pTM=0.484 ipTM=0.271 tol=2.01
2024-07-09 06:50:11,992 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.4 pTM=0.484 ipTM=0.275 tol=2.07
2024-07-09 06:53:12,242 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.4 pTM=0.484 ipTM=0.281 tol=2.85
2024-07-09 06:56:12,490 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.4 pTM=0.484 ipTM=0.28 tol=3.04
2024-07-09 06:59:12,744 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.6 pTM=0.484 ipTM=0.283 tol=1.43
2024-07-09 07:02:12,989 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.4 pTM=0.484 ipTM=0.279 tol=1.46
2024-07-09 07:05:13,234 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.4 pTM=0.485 ipTM=0.281 tol=1.43
2024-07-09 07:08:13,485 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.6 pTM=0.487 ipTM=0.281 tol=1.13
2024-07-09 07:11:13,729 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.3 pTM=0.485 ipTM=0.284 tol=1.19
2024-07-09 07:14:13,979 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.5 pTM=0.484 ipTM=0.286 tol=1.08
2024-07-09 07:17:14,205 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.3 pTM=0.482 ipTM=0.279 tol=0.946
2024-07-09 07:20:14,451 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.5 pTM=0.484 ipTM=0.277 tol=1.23
2024-07-09 07:23:14,648 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.6 pTM=0.486 ipTM=0.287 tol=1.18
2024-07-09 07:26:14,829 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.6 pTM=0.487 ipTM=0.28 tol=1.28
2024-07-09 07:29:15,050 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.3 pTM=0.485 ipTM=0.281 tol=1.06
2024-07-09 07:32:15,293 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.7 pTM=0.487 ipTM=0.283 tol=1.35
2024-07-09 07:35:15,522 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.5 pTM=0.485 ipTM=0.285 tol=0.979
2024-07-09 07:38:15,756 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.4 pTM=0.487 ipTM=0.277 tol=1.06
2024-07-09 07:41:16,003 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.4 pTM=0.485 ipTM=0.284 tol=1.15
2024-07-09 07:41:16,006 alphafold2_multimer_v3_model_1_seed_000 took 5760.0s (30 recycles)
2024-07-09 07:44:19,098 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=63.6 pTM=0.502 ipTM=0.239
2024-07-09 07:47:19,429 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.5 pTM=0.51 ipTM=0.246 tol=10.7
2024-07-09 07:50:19,820 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.8 pTM=0.504 ipTM=0.291 tol=8.55
2024-07-09 07:53:20,161 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.1 pTM=0.509 ipTM=0.316 tol=3.62
2024-07-09 07:56:20,509 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.4 pTM=0.511 ipTM=0.327 tol=2.34
2024-07-09 07:59:20,879 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.3 pTM=0.512 ipTM=0.337 tol=2.04
2024-07-09 08:02:21,234 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.4 pTM=0.508 ipTM=0.33 tol=1.87
2024-07-09 08:05:21,610 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.5 pTM=0.508 ipTM=0.334 tol=1.7
2024-07-09 08:08:22,007 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.5 pTM=0.507 ipTM=0.325 tol=1.35
2024-07-09 08:11:22,423 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.6 pTM=0.507 ipTM=0.323 tol=1.33
2024-07-09 08:14:22,796 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.7 pTM=0.506 ipTM=0.326 tol=1.83
2024-07-09 08:17:23,164 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.4 pTM=0.505 ipTM=0.322 tol=2.21
2024-07-09 08:20:23,547 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.6 pTM=0.507 ipTM=0.329 tol=1.32
2024-07-09 08:23:23,911 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.5 pTM=0.505 ipTM=0.325 tol=1.46
2024-07-09 08:26:24,288 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.4 pTM=0.504 ipTM=0.323 tol=1.41
2024-07-09 08:29:24,643 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.6 pTM=0.509 ipTM=0.326 tol=1.33
2024-07-09 08:32:24,968 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.6 pTM=0.507 ipTM=0.322 tol=1.26
2024-07-09 08:35:25,308 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.5 pTM=0.505 ipTM=0.322 tol=1.28
2024-07-09 08:38:25,628 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.6 pTM=0.506 ipTM=0.323 tol=1.41
2024-07-09 08:41:25,962 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.6 pTM=0.506 ipTM=0.324 tol=0.972
2024-07-09 08:44:26,297 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.4 pTM=0.505 ipTM=0.319 tol=1.25
2024-07-09 08:47:26,623 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.6 pTM=0.506 ipTM=0.314 tol=1.08
2024-07-09 08:50:26,935 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.4 pTM=0.503 ipTM=0.311 tol=1.29
2024-07-09 08:53:27,248 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.6 pTM=0.505 ipTM=0.31 tol=1.02
2024-07-09 08:56:27,574 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.4 pTM=0.506 ipTM=0.316 tol=0.95
2024-07-09 08:59:27,891 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.4 pTM=0.505 ipTM=0.313 tol=0.898
2024-07-09 09:02:28,179 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.4 pTM=0.507 ipTM=0.317 tol=1
2024-07-09 09:05:28,501 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.7 pTM=0.507 ipTM=0.314 tol=1.3
2024-07-09 09:08:28,823 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.5 pTM=0.503 ipTM=0.307 tol=1.39
2024-07-09 09:11:29,155 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.4 pTM=0.507 ipTM=0.307 tol=1.22
2024-07-09 09:14:29,480 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.4 pTM=0.505 ipTM=0.306 tol=1.12
2024-07-09 09:14:29,483 alphafold2_multimer_v3_model_2_seed_000 took 5590.9s (30 recycles)
2024-07-09 09:17:32,699 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.1 pTM=0.472 ipTM=0.26
2024-07-09 09:20:33,185 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.6 pTM=0.499 ipTM=0.274 tol=9.56
2024-07-09 09:23:33,568 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.7 pTM=0.499 ipTM=0.238 tol=7.85
2024-07-09 09:26:33,949 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.9 pTM=0.494 ipTM=0.234 tol=4.85
2024-07-09 09:29:34,339 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.2 pTM=0.496 ipTM=0.241 tol=3.43
2024-07-09 09:32:34,684 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.1 pTM=0.498 ipTM=0.249 tol=3.39
2024-07-09 09:35:35,009 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.1 pTM=0.501 ipTM=0.253 tol=2.72
2024-07-09 09:38:35,327 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.2 pTM=0.504 ipTM=0.252 tol=3.21
2024-07-09 09:41:35,594 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.2 pTM=0.502 ipTM=0.253 tol=1.9
2024-07-09 09:44:35,876 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.5 pTM=0.504 ipTM=0.256 tol=1.95
2024-07-09 09:47:36,190 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.4 pTM=0.501 ipTM=0.254 tol=2.02
2024-07-09 09:50:36,465 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.4 pTM=0.499 ipTM=0.253 tol=1.95
2024-07-09 09:53:36,717 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.4 pTM=0.506 ipTM=0.259 tol=2.06
2024-07-09 09:56:37,015 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.5 pTM=0.499 ipTM=0.259 tol=1.26
2024-07-09 09:59:37,311 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.4 pTM=0.498 ipTM=0.258 tol=1.04
2024-07-09 10:02:37,616 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.3 pTM=0.499 ipTM=0.254 tol=1.09
2024-07-09 10:05:37,941 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.5 pTM=0.498 ipTM=0.252 tol=1.2
2024-07-09 10:08:38,223 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.4 pTM=0.5 ipTM=0.25 tol=1.26
2024-07-09 10:11:38,548 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.6 pTM=0.503 ipTM=0.251 tol=1
2024-07-09 10:14:38,855 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.5 pTM=0.502 ipTM=0.25 tol=0.819
2024-07-09 10:17:39,162 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.4 pTM=0.499 ipTM=0.25 tol=1.11
2024-07-09 10:20:39,507 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.6 pTM=0.5 ipTM=0.251 tol=2.29
2024-07-09 10:23:39,788 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.5 pTM=0.502 ipTM=0.252 tol=2.25
2024-07-09 10:26:40,070 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.5 pTM=0.502 ipTM=0.25 tol=2.71
2024-07-09 10:29:40,339 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.7 pTM=0.503 ipTM=0.251 tol=2.33
2024-07-09 10:32:40,600 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.6 pTM=0.505 ipTM=0.249 tol=1.03
2024-07-09 10:35:40,829 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.5 pTM=0.505 ipTM=0.254 tol=2.19
2024-07-09 10:38:41,086 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.6 pTM=0.502 ipTM=0.254 tol=2.37
2024-07-09 10:41:41,374 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.6 pTM=0.502 ipTM=0.256 tol=2.53
2024-07-09 10:44:41,583 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.5 pTM=0.506 ipTM=0.252 tol=2.59
2024-07-09 10:47:41,832 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.6 pTM=0.502 ipTM=0.251 tol=0.984
2024-07-09 10:47:41,835 alphafold2_multimer_v3_model_3_seed_000 took 5589.8s (30 recycles)
2024-07-09 10:50:45,075 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.1 pTM=0.488 ipTM=0.282
2024-07-09 10:53:45,484 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.7 pTM=0.518 ipTM=0.282 tol=8.81
2024-07-09 10:56:45,836 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.2 pTM=0.513 ipTM=0.271 tol=5.6
2024-07-09 10:59:46,232 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.4 pTM=0.51 ipTM=0.262 tol=3.59
2024-07-09 11:02:46,688 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.6 pTM=0.508 ipTM=0.247 tol=3.36
2024-07-09 11:05:47,069 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.4 pTM=0.505 ipTM=0.248 tol=3.43
2024-07-09 11:08:47,443 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.6 pTM=0.509 ipTM=0.244 tol=2.52
2024-07-09 11:11:47,792 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.7 pTM=0.511 ipTM=0.245 tol=2.03
2024-07-09 11:14:48,185 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.8 pTM=0.509 ipTM=0.246 tol=1.83
2024-07-09 11:17:48,530 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.5 pTM=0.511 ipTM=0.24 tol=4.8
2024-07-09 11:20:48,902 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.4 pTM=0.508 ipTM=0.236 tol=2.75
2024-07-09 11:23:49,303 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.5 pTM=0.505 ipTM=0.235 tol=2.08
2024-07-09 11:26:49,739 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.6 pTM=0.509 ipTM=0.235 tol=1.71
2024-07-09 11:29:50,170 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.5 pTM=0.507 ipTM=0.237 tol=1.67
2024-07-09 11:32:50,614 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.7 pTM=0.507 ipTM=0.236 tol=1.72
2024-07-09 11:35:51,043 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67 pTM=0.511 ipTM=0.236 tol=2.39
2024-07-09 11:38:51,481 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67 pTM=0.505 ipTM=0.235 tol=1.77
2024-07-09 11:41:51,934 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.9 pTM=0.504 ipTM=0.229 tol=1.46
2024-07-09 11:44:52,353 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.9 pTM=0.505 ipTM=0.232 tol=1.7
2024-07-09 11:47:52,792 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67 pTM=0.504 ipTM=0.235 tol=1.18
2024-07-09 11:50:53,211 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67 pTM=0.504 ipTM=0.238 tol=0.978
2024-07-09 11:53:53,642 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.1 pTM=0.504 ipTM=0.239 tol=1.04
2024-07-09 11:56:54,040 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.9 pTM=0.504 ipTM=0.24 tol=1.24
2024-07-09 11:59:54,443 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67 pTM=0.505 ipTM=0.243 tol=1.67
2024-07-09 12:02:54,843 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67 pTM=0.504 ipTM=0.239 tol=1.61
2024-07-09 12:05:55,236 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.1 pTM=0.51 ipTM=0.241 tol=2.06
2024-07-09 12:08:55,585 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.9 pTM=0.507 ipTM=0.243 tol=1.39
2024-07-09 12:11:55,970 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.1 pTM=0.51 ipTM=0.242 tol=1.27
2024-07-09 12:14:56,337 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.1 pTM=0.506 ipTM=0.247 tol=1.52
2024-07-09 12:17:56,693 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.9 pTM=0.509 ipTM=0.243 tol=1.61
2024-07-09 12:20:57,054 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.8 pTM=0.507 ipTM=0.24 tol=1.98
2024-07-09 12:20:57,056 alphafold2_multimer_v3_model_4_seed_000 took 5592.7s (30 recycles)
2024-07-09 12:24:00,333 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61 pTM=0.466 ipTM=0.21
2024-07-09 12:27:00,888 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.8 pTM=0.482 ipTM=0.238 tol=8.77
2024-07-09 12:30:01,449 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.7 pTM=0.482 ipTM=0.231 tol=6.85
2024-07-09 12:33:01,980 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.1 pTM=0.479 ipTM=0.222 tol=4.32
2024-07-09 12:36:02,521 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.4 pTM=0.481 ipTM=0.218 tol=3.48
2024-07-09 12:39:02,949 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.3 pTM=0.479 ipTM=0.224 tol=5
2024-07-09 12:42:03,340 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.4 pTM=0.483 ipTM=0.232 tol=4.51
2024-07-09 12:45:03,720 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.4 pTM=0.483 ipTM=0.235 tol=3.51
2024-07-09 12:48:04,079 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.3 pTM=0.482 ipTM=0.24 tol=2.4
2024-07-09 12:51:04,456 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.4 pTM=0.485 ipTM=0.23 tol=2.17
2024-07-09 12:54:04,848 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.4 pTM=0.485 ipTM=0.229 tol=3.5
2024-07-09 12:57:05,221 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.5 pTM=0.485 ipTM=0.232 tol=2.2
2024-07-09 13:00:05,593 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.3 pTM=0.486 ipTM=0.229 tol=1.69
2024-07-09 13:03:05,974 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.5 pTM=0.485 ipTM=0.231 tol=3.15
2024-07-09 13:06:06,351 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.4 pTM=0.483 ipTM=0.232 tol=3.14
2024-07-09 13:09:06,713 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.2 pTM=0.485 ipTM=0.233 tol=3.32
2024-07-09 13:12:07,113 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.4 pTM=0.485 ipTM=0.232 tol=2.7
2024-07-09 13:15:07,477 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.4 pTM=0.483 ipTM=0.23 tol=1.58
2024-07-09 13:18:07,871 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.4 pTM=0.486 ipTM=0.229 tol=2.76
2024-07-09 13:21:08,250 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.3 pTM=0.486 ipTM=0.233 tol=2.35
2024-07-09 13:24:08,630 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.2 pTM=0.484 ipTM=0.231 tol=2.69
2024-07-09 13:27:08,965 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.4 pTM=0.484 ipTM=0.233 tol=1.58
2024-07-09 13:30:09,312 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.3 pTM=0.486 ipTM=0.235 tol=2.88
2024-07-09 13:33:09,633 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.4 pTM=0.486 ipTM=0.236 tol=2.34
2024-07-09 13:36:09,948 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.6 pTM=0.488 ipTM=0.24 tol=2.42
2024-07-09 13:39:10,292 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.4 pTM=0.486 ipTM=0.236 tol=2.7
2024-07-09 13:42:10,618 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.3 pTM=0.487 ipTM=0.236 tol=2.52
2024-07-09 13:45:10,939 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.5 pTM=0.487 ipTM=0.237 tol=2.47
2024-07-09 13:48:11,253 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.4 pTM=0.487 ipTM=0.237 tol=1.34
2024-07-09 13:51:11,559 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.1 pTM=0.487 ipTM=0.233 tol=2.68
2024-07-09 13:54:11,886 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.3 pTM=0.485 ipTM=0.233 tol=2.86
2024-07-09 13:54:11,889 alphafold2_multimer_v3_model_5_seed_000 took 5592.3s (30 recycles)
2024-07-09 13:54:14,420 reranking models by 'multimer' metric
2024-07-09 13:54:16,595 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 14:48:25,865 Relaxation took 3251.4s
2024-07-09 14:48:25,865 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.4 pTM=0.505 ipTM=0.306
2024-07-09 14:59:07,225 Relaxation took 641.4s
2024-07-09 14:59:07,225 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.4 pTM=0.485 ipTM=0.284
2024-07-09 15:04:26,735 Relaxation took 319.5s
2024-07-09 15:04:26,735 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.6 pTM=0.502 ipTM=0.251
2024-07-09 15:52:59,659 Relaxation took 2912.9s
2024-07-09 15:52:59,659 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.8 pTM=0.507 ipTM=0.24
2024-07-09 15:59:59,873 Relaxation took 420.2s
2024-07-09 15:59:59,874 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.3 pTM=0.485 ipTM=0.233
2024-07-09 16:00:05,619 Done