2024-07-09 06:04:25,725 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 06:04:26,036 Running on GPU
2024-07-09 06:04:29,536 Found 6 citations for tools or databases
2024-07-09 06:04:29,537 Query 1/1: CMI2B_SDS3 (length 603)
2024-07-09 06:04:29,988 Sleeping for 9s. Reason: PENDING
2024-07-09 06:04:39,410 Sleeping for 6s. Reason: RUNNING
2024-07-09 06:04:45,830 Sleeping for 8s. Reason: RUNNING
2024-07-09 06:04:54,255 Sleeping for 5s. Reason: RUNNING
2024-07-09 06:05:02,058 Sleeping for 9s. Reason: PENDING
2024-07-09 06:05:11,510 Sleeping for 10s. Reason: RUNNING
2024-07-09 06:05:21,936 Sleeping for 5s. Reason: RUNNING
2024-07-09 06:05:30,346 Setting max_seq=508, max_extra_seq=2048
2024-07-09 06:08:14,464 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49.9 pTM=0.202 ipTM=0.136
2024-07-09 06:08:21,783 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.3 pTM=0.21 ipTM=0.106 tol=10.1
2024-07-09 06:08:29,119 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.4 pTM=0.219 ipTM=0.103 tol=13.5
2024-07-09 06:08:36,452 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.7 pTM=0.224 ipTM=0.105 tol=4.93
2024-07-09 06:08:43,784 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.8 pTM=0.224 ipTM=0.106 tol=2.64
2024-07-09 06:08:51,127 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.6 pTM=0.224 ipTM=0.11 tol=2.28
2024-07-09 06:08:58,475 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.1 pTM=0.226 ipTM=0.111 tol=1.67
2024-07-09 06:09:05,832 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.7 pTM=0.224 ipTM=0.111 tol=1.66
2024-07-09 06:09:13,190 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.3 pTM=0.225 ipTM=0.112 tol=2.46
2024-07-09 06:09:20,554 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=50.4 pTM=0.225 ipTM=0.113 tol=2.71
2024-07-09 06:09:27,933 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.5 pTM=0.226 ipTM=0.113 tol=1.68
2024-07-09 06:09:35,300 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.2 pTM=0.225 ipTM=0.115 tol=1.68
2024-07-09 06:09:42,676 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50.6 pTM=0.224 ipTM=0.112 tol=3.31
2024-07-09 06:09:50,061 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=50.5 pTM=0.222 ipTM=0.113 tol=2.58
2024-07-09 06:09:57,447 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.5 pTM=0.223 ipTM=0.109 tol=2.14
2024-07-09 06:10:04,841 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=50.4 pTM=0.223 ipTM=0.108 tol=2.41
2024-07-09 06:10:12,225 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.5 pTM=0.224 ipTM=0.112 tol=2.23
2024-07-09 06:10:19,615 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=50.2 pTM=0.225 ipTM=0.111 tol=1.96
2024-07-09 06:10:27,008 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=50 pTM=0.227 ipTM=0.111 tol=1.83
2024-07-09 06:10:34,393 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.8 pTM=0.226 ipTM=0.112 tol=2.08
2024-07-09 06:10:41,788 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.9 pTM=0.224 ipTM=0.111 tol=2.6
2024-07-09 06:10:49,177 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.7 pTM=0.225 ipTM=0.112 tol=2.71
2024-07-09 06:10:56,573 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=50.4 pTM=0.225 ipTM=0.113 tol=4.05
2024-07-09 06:11:03,965 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.8 pTM=0.226 ipTM=0.111 tol=2.4
2024-07-09 06:11:11,356 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.8 pTM=0.227 ipTM=0.115 tol=2.47
2024-07-09 06:11:18,745 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.8 pTM=0.228 ipTM=0.112 tol=1.65
2024-07-09 06:11:26,135 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=50.2 pTM=0.225 ipTM=0.11 tol=1.09
2024-07-09 06:11:33,525 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.7 pTM=0.225 ipTM=0.109 tol=1.32
2024-07-09 06:11:40,920 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.8 pTM=0.224 ipTM=0.108 tol=1.43
2024-07-09 06:11:48,313 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.9 pTM=0.224 ipTM=0.109 tol=1.44
2024-07-09 06:11:55,710 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50 pTM=0.226 ipTM=0.109 tol=1.71
2024-07-09 06:11:55,711 alphafold2_multimer_v3_model_1_seed_000 took 381.8s (30 recycles)
2024-07-09 06:12:03,333 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.8 pTM=0.208 ipTM=0.102
2024-07-09 06:12:10,718 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.1 pTM=0.219 ipTM=0.104 tol=12.1
2024-07-09 06:12:18,108 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.7 pTM=0.225 ipTM=0.108 tol=8.39
2024-07-09 06:12:25,495 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.7 pTM=0.227 ipTM=0.111 tol=3.83
2024-07-09 06:12:32,879 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.6 pTM=0.226 ipTM=0.111 tol=4.48
2024-07-09 06:12:40,270 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.2 pTM=0.227 ipTM=0.111 tol=5.57
2024-07-09 06:12:47,654 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.9 pTM=0.229 ipTM=0.11 tol=3.54
2024-07-09 06:12:55,037 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.2 pTM=0.227 ipTM=0.11 tol=2.69
2024-07-09 06:13:02,418 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.6 pTM=0.228 ipTM=0.111 tol=2.71
2024-07-09 06:13:09,805 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.7 pTM=0.228 ipTM=0.112 tol=2.26
2024-07-09 06:13:17,188 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=51.4 pTM=0.229 ipTM=0.113 tol=2.64
2024-07-09 06:13:24,564 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.6 pTM=0.228 ipTM=0.113 tol=1.77
2024-07-09 06:13:31,940 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.6 pTM=0.227 ipTM=0.109 tol=2.47
2024-07-09 06:13:39,314 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51.6 pTM=0.228 ipTM=0.112 tol=2.79
2024-07-09 06:13:46,695 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=51.2 pTM=0.228 ipTM=0.11 tol=2.79
2024-07-09 06:13:54,070 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=51.4 pTM=0.227 ipTM=0.11 tol=2.01
2024-07-09 06:14:01,448 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=51.9 pTM=0.226 ipTM=0.109 tol=2.68
2024-07-09 06:14:08,838 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=51.6 pTM=0.228 ipTM=0.107 tol=2.12
2024-07-09 06:14:16,217 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=51.8 pTM=0.228 ipTM=0.108 tol=2.13
2024-07-09 06:14:23,598 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=51.8 pTM=0.227 ipTM=0.107 tol=2.47
2024-07-09 06:14:30,976 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52 pTM=0.226 ipTM=0.107 tol=1.34
2024-07-09 06:14:38,358 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.9 pTM=0.227 ipTM=0.108 tol=1.24
2024-07-09 06:14:45,743 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.2 pTM=0.228 ipTM=0.108 tol=2.82
2024-07-09 06:14:53,126 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51.6 pTM=0.228 ipTM=0.107 tol=2.75
2024-07-09 06:15:00,506 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=51.9 pTM=0.227 ipTM=0.107 tol=2.75
2024-07-09 06:15:07,886 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.5 pTM=0.227 ipTM=0.108 tol=2.15
2024-07-09 06:15:15,265 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=51.7 pTM=0.227 ipTM=0.108 tol=2.09
2024-07-09 06:15:22,648 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.8 pTM=0.227 ipTM=0.108 tol=1.52
2024-07-09 06:15:30,029 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=51.8 pTM=0.225 ipTM=0.107 tol=1.62
2024-07-09 06:15:37,412 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=51.8 pTM=0.226 ipTM=0.108 tol=2.22
2024-07-09 06:15:44,784 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=51.8 pTM=0.227 ipTM=0.109 tol=1.81
2024-07-09 06:15:44,785 alphafold2_multimer_v3_model_2_seed_000 took 228.8s (30 recycles)
2024-07-09 06:15:52,448 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.3 pTM=0.208 ipTM=0.0989
2024-07-09 06:15:59,866 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.1 pTM=0.223 ipTM=0.0905 tol=16.9
2024-07-09 06:16:07,273 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46.6 pTM=0.234 ipTM=0.11 tol=19.5
2024-07-09 06:16:14,674 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.4 pTM=0.234 ipTM=0.109 tol=4.7
2024-07-09 06:16:22,073 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.7 pTM=0.233 ipTM=0.111 tol=3.21
2024-07-09 06:16:29,469 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46.2 pTM=0.234 ipTM=0.11 tol=2.27
2024-07-09 06:16:36,865 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45.8 pTM=0.237 ipTM=0.113 tol=3.1
2024-07-09 06:16:44,267 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=46.5 pTM=0.235 ipTM=0.113 tol=2.91
2024-07-09 06:16:51,666 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=46 pTM=0.236 ipTM=0.116 tol=2.03
2024-07-09 06:16:59,070 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=46 pTM=0.239 ipTM=0.115 tol=2.58
2024-07-09 06:17:06,475 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=46 pTM=0.239 ipTM=0.118 tol=2.92
2024-07-09 06:17:13,880 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=45.4 pTM=0.238 ipTM=0.116 tol=2.59
2024-07-09 06:17:21,282 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.8 pTM=0.237 ipTM=0.111 tol=3.5
2024-07-09 06:17:28,688 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.9 pTM=0.239 ipTM=0.115 tol=2.53
2024-07-09 06:17:36,089 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=45.1 pTM=0.243 ipTM=0.126 tol=6.98
2024-07-09 06:17:43,487 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=45.5 pTM=0.24 ipTM=0.117 tol=3.3
2024-07-09 06:17:50,891 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.6 pTM=0.239 ipTM=0.115 tol=2.11
2024-07-09 06:17:58,303 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=46 pTM=0.244 ipTM=0.117 tol=4.7
2024-07-09 06:18:05,703 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=45.4 pTM=0.246 ipTM=0.12 tol=4.91
2024-07-09 06:18:13,099 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.1 pTM=0.248 ipTM=0.122 tol=5.31
2024-07-09 06:18:20,514 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44.8 pTM=0.245 ipTM=0.117 tol=6.98
2024-07-09 06:18:27,915 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=45.2 pTM=0.248 ipTM=0.125 tol=2.54
2024-07-09 06:18:35,319 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45.8 pTM=0.247 ipTM=0.125 tol=2.93
2024-07-09 06:18:42,716 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=46 pTM=0.249 ipTM=0.122 tol=1.73
2024-07-09 06:18:50,110 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.1 pTM=0.249 ipTM=0.124 tol=2.49
2024-07-09 06:18:57,507 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=45.5 pTM=0.252 ipTM=0.128 tol=2
2024-07-09 06:19:04,897 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=45.9 pTM=0.248 ipTM=0.122 tol=2.48
2024-07-09 06:19:12,292 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=45.4 pTM=0.248 ipTM=0.119 tol=2.32
2024-07-09 06:19:19,684 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46.1 pTM=0.248 ipTM=0.118 tol=2.13
2024-07-09 06:19:27,075 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=45.2 pTM=0.249 ipTM=0.121 tol=2.28
2024-07-09 06:19:34,462 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.4 pTM=0.248 ipTM=0.121 tol=1.91
2024-07-09 06:19:34,463 alphafold2_multimer_v3_model_3_seed_000 took 229.4s (30 recycles)
2024-07-09 06:19:42,117 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.5 pTM=0.25 ipTM=0.212
2024-07-09 06:19:49,501 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.9 pTM=0.215 ipTM=0.125 tol=11
2024-07-09 06:19:56,895 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.3 pTM=0.218 ipTM=0.103 tol=10.1
2024-07-09 06:20:04,293 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.2 pTM=0.222 ipTM=0.106 tol=7.6
2024-07-09 06:20:11,697 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46 pTM=0.228 ipTM=0.118 tol=4.57
2024-07-09 06:20:19,096 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.2 pTM=0.226 ipTM=0.116 tol=3.63
2024-07-09 06:20:26,488 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.7 pTM=0.226 ipTM=0.114 tol=4
2024-07-09 06:20:33,884 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.4 pTM=0.226 ipTM=0.116 tol=3.02
2024-07-09 06:20:41,289 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.4 pTM=0.226 ipTM=0.116 tol=3.89
2024-07-09 06:20:48,688 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.8 pTM=0.226 ipTM=0.115 tol=3.07
2024-07-09 06:20:56,087 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47 pTM=0.227 ipTM=0.116 tol=2.88
2024-07-09 06:21:03,494 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.5 pTM=0.225 ipTM=0.114 tol=2.12
2024-07-09 06:21:10,910 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.2 pTM=0.223 ipTM=0.109 tol=3.23
2024-07-09 06:21:18,323 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.6 pTM=0.224 ipTM=0.113 tol=2.77
2024-07-09 06:21:25,736 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.6 pTM=0.225 ipTM=0.114 tol=2.6
2024-07-09 06:21:33,146 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47 pTM=0.223 ipTM=0.111 tol=3.1
2024-07-09 06:21:40,557 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.1 pTM=0.224 ipTM=0.112 tol=5.33
2024-07-09 06:21:47,975 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47 pTM=0.222 ipTM=0.109 tol=4.06
2024-07-09 06:21:55,383 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.8 pTM=0.225 ipTM=0.115 tol=3.17
2024-07-09 06:22:02,797 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.6 pTM=0.224 ipTM=0.113 tol=4.79
2024-07-09 06:22:10,206 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.5 pTM=0.224 ipTM=0.112 tol=3.56
2024-07-09 06:22:17,613 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.2 pTM=0.223 ipTM=0.112 tol=4.05
2024-07-09 06:22:25,022 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.7 pTM=0.225 ipTM=0.113 tol=3.46
2024-07-09 06:22:32,439 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.5 pTM=0.224 ipTM=0.11 tol=3.05
2024-07-09 06:22:39,860 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.1 pTM=0.223 ipTM=0.108 tol=3.85
2024-07-09 06:22:47,267 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.3 pTM=0.225 ipTM=0.113 tol=5.64
2024-07-09 06:22:54,668 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.1 pTM=0.224 ipTM=0.115 tol=2.76
2024-07-09 06:23:02,070 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46.7 pTM=0.225 ipTM=0.112 tol=2.61
2024-07-09 06:23:09,470 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47 pTM=0.223 ipTM=0.113 tol=2.27
2024-07-09 06:23:16,877 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.9 pTM=0.224 ipTM=0.112 tol=2.26
2024-07-09 06:23:24,282 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=46.8 pTM=0.223 ipTM=0.111 tol=4.63
2024-07-09 06:23:24,282 alphafold2_multimer_v3_model_4_seed_000 took 229.6s (30 recycles)
2024-07-09 06:23:31,913 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47 pTM=0.212 ipTM=0.12
2024-07-09 06:23:39,296 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.9 pTM=0.227 ipTM=0.102 tol=10.6
2024-07-09 06:23:46,673 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.2 pTM=0.23 ipTM=0.101 tol=5.48
2024-07-09 06:23:54,059 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.1 pTM=0.232 ipTM=0.107 tol=4.12
2024-07-09 06:24:01,438 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=45.8 pTM=0.234 ipTM=0.109 tol=2.8
2024-07-09 06:24:08,821 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.1 pTM=0.233 ipTM=0.108 tol=3.98
2024-07-09 06:24:16,201 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=45.7 pTM=0.234 ipTM=0.112 tol=4.3
2024-07-09 06:24:23,579 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.1 pTM=0.236 ipTM=0.116 tol=3.44
2024-07-09 06:24:30,956 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.1 pTM=0.236 ipTM=0.116 tol=2.65
2024-07-09 06:24:38,337 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.2 pTM=0.237 ipTM=0.117 tol=3.83
2024-07-09 06:24:45,719 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.2 pTM=0.237 ipTM=0.118 tol=2.37
2024-07-09 06:24:53,097 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.1 pTM=0.239 ipTM=0.12 tol=2.71
2024-07-09 06:25:00,477 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.6 pTM=0.235 ipTM=0.117 tol=2.39
2024-07-09 06:25:07,849 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.7 pTM=0.238 ipTM=0.124 tol=1.56
2024-07-09 06:25:15,225 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.2 pTM=0.238 ipTM=0.122 tol=1.55
2024-07-09 06:25:22,604 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.4 pTM=0.235 ipTM=0.115 tol=1.25
2024-07-09 06:25:29,978 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.3 pTM=0.233 ipTM=0.113 tol=1.92
2024-07-09 06:25:37,359 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47 pTM=0.232 ipTM=0.11 tol=2.78
2024-07-09 06:25:44,725 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.6 pTM=0.237 ipTM=0.116 tol=2.71
2024-07-09 06:25:52,110 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.8 pTM=0.233 ipTM=0.111 tol=2.04
2024-07-09 06:25:59,488 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.1 pTM=0.233 ipTM=0.111 tol=2.67
2024-07-09 06:26:06,865 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.2 pTM=0.232 ipTM=0.111 tol=2.67
2024-07-09 06:26:14,254 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.3 pTM=0.234 ipTM=0.113 tol=1.74
2024-07-09 06:26:21,631 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.8 pTM=0.236 ipTM=0.113 tol=1.61
2024-07-09 06:26:28,997 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.2 pTM=0.235 ipTM=0.114 tol=1.2
2024-07-09 06:26:36,372 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=46.7 pTM=0.236 ipTM=0.114 tol=1.21
2024-07-09 06:26:43,746 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.2 pTM=0.237 ipTM=0.118 tol=0.967
2024-07-09 06:26:51,124 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.2 pTM=0.236 ipTM=0.115 tol=1.39
2024-07-09 06:26:58,492 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.6 pTM=0.237 ipTM=0.113 tol=2.8
2024-07-09 06:27:05,866 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.8 pTM=0.235 ipTM=0.113 tol=1.49
2024-07-09 06:27:13,242 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.5 pTM=0.235 ipTM=0.111 tol=2.63
2024-07-09 06:27:13,242 alphafold2_multimer_v3_model_5_seed_000 took 228.7s (30 recycles)
2024-07-09 06:27:13,481 reranking models by 'multimer' metric
2024-07-09 06:27:16,519 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 06:28:04,373 Relaxation took 50.9s
2024-07-09 06:28:04,373 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.4 pTM=0.248 ipTM=0.121
2024-07-09 06:28:23,692 Relaxation took 19.3s
2024-07-09 06:28:23,692 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.5 pTM=0.235 ipTM=0.111
2024-07-09 06:28:43,277 Relaxation took 19.6s
2024-07-09 06:28:43,277 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=46.8 pTM=0.223 ipTM=0.111
2024-07-09 06:29:03,462 Relaxation took 20.2s
2024-07-09 06:29:03,462 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=51.8 pTM=0.227 ipTM=0.109
2024-07-09 06:29:34,615 Relaxation took 31.2s
2024-07-09 06:29:34,615 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50 pTM=0.226 ipTM=0.109
2024-07-09 06:29:35,710 Done