2024-07-09 08:35:45,748 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 08:35:46,106 Running on GPU
2024-07-09 08:35:49,576 Found 6 citations for tools or databases
2024-07-09 08:35:49,576 Query 1/1: COPA1_ZEB2 (length 1868)
2024-07-09 08:35:50,126 Sleeping for 6s. Reason: PENDING
2024-07-09 08:35:56,583 Sleeping for 10s. Reason: RUNNING
2024-07-09 08:36:07,034 Sleeping for 8s. Reason: RUNNING
2024-07-09 08:36:15,459 Sleeping for 5s. Reason: RUNNING
2024-07-09 08:36:20,867 Sleeping for 10s. Reason: RUNNING
2024-07-09 08:36:31,290 Sleeping for 6s. Reason: RUNNING
2024-07-09 08:36:37,706 Sleeping for 10s. Reason: RUNNING
2024-07-09 08:36:48,161 Sleeping for 10s. Reason: RUNNING
2024-07-09 08:36:59,112 Sleeping for 7s. Reason: RUNNING
2024-07-09 08:37:06,693 Sleeping for 9s. Reason: RUNNING
2024-07-09 08:37:16,097 Sleeping for 7s. Reason: RUNNING
2024-07-09 08:37:23,530 Sleeping for 6s. Reason: RUNNING
2024-07-09 08:37:29,939 Sleeping for 9s. Reason: RUNNING
2024-07-09 08:37:39,370 Sleeping for 10s. Reason: RUNNING
2024-07-09 08:37:49,802 Sleeping for 7s. Reason: RUNNING
2024-07-09 08:37:57,712 Sleeping for 10s. Reason: RUNNING
2024-07-09 08:38:08,131 Sleeping for 8s. Reason: RUNNING
2024-07-09 08:38:16,554 Sleeping for 8s. Reason: RUNNING
2024-07-09 08:38:24,974 Sleeping for 8s. Reason: RUNNING
2024-07-09 08:38:44,755 Sleeping for 6s. Reason: PENDING
2024-07-09 08:38:51,170 Sleeping for 9s. Reason: RUNNING
2024-07-09 08:39:00,584 Sleeping for 8s. Reason: RUNNING
2024-07-09 08:39:10,306 Sleeping for 7s. Reason: RUNNING
2024-07-09 08:39:17,727 Sleeping for 6s. Reason: RUNNING
2024-07-09 08:39:24,476 Sleeping for 10s. Reason: RUNNING
2024-07-09 08:39:34,901 Sleeping for 5s. Reason: RUNNING
2024-07-09 08:39:40,310 Sleeping for 7s. Reason: RUNNING
2024-07-09 08:39:47,731 Sleeping for 7s. Reason: RUNNING
2024-07-09 08:39:55,152 Sleeping for 6s. Reason: RUNNING
2024-07-09 08:40:01,570 Sleeping for 6s. Reason: RUNNING
2024-07-09 08:40:07,983 Sleeping for 7s. Reason: RUNNING
2024-07-09 08:40:15,408 Sleeping for 5s. Reason: RUNNING
2024-07-09 08:40:21,334 Sleeping for 5s. Reason: RUNNING
2024-07-09 08:40:31,686 Setting max_seq=508, max_extra_seq=2048
2024-07-09 08:44:59,140 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=24.6 pTM=0.22 ipTM=0.184
2024-07-09 08:47:08,532 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=23.9 pTM=0.209 ipTM=0.191 tol=19.9
2024-07-09 08:49:17,995 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=23.9 pTM=0.209 ipTM=0.194 tol=15.7
2024-07-09 08:51:27,536 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=24.4 pTM=0.209 ipTM=0.192 tol=11.1
2024-07-09 08:53:37,047 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=24.5 pTM=0.215 ipTM=0.196 tol=8.71
2024-07-09 08:55:46,539 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=24.7 pTM=0.218 ipTM=0.196 tol=7.5
2024-07-09 08:57:56,094 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=24.6 pTM=0.215 ipTM=0.194 tol=15.6
2024-07-09 09:00:05,593 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=24.5 pTM=0.216 ipTM=0.195 tol=8.22
2024-07-09 09:02:15,124 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=24.7 pTM=0.215 ipTM=0.194 tol=11.7
2024-07-09 09:04:24,635 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=24.8 pTM=0.217 ipTM=0.193 tol=7.45
2024-07-09 09:06:34,180 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=24.9 pTM=0.213 ipTM=0.194 tol=6.62
2024-07-09 09:08:43,673 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=24.8 pTM=0.215 ipTM=0.197 tol=12.1
2024-07-09 09:10:53,136 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=24.8 pTM=0.215 ipTM=0.195 tol=4.51
2024-07-09 09:13:02,600 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=24.6 pTM=0.219 ipTM=0.196 tol=10.2
2024-07-09 09:15:12,122 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=24.5 pTM=0.215 ipTM=0.197 tol=8.7
2024-07-09 09:17:21,679 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=24.7 pTM=0.213 ipTM=0.194 tol=5.92
2024-07-09 09:19:31,218 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=24.6 pTM=0.214 ipTM=0.195 tol=5.84
2024-07-09 09:21:40,765 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=24.8 pTM=0.211 ipTM=0.194 tol=11.5
2024-07-09 09:23:50,289 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=24.8 pTM=0.212 ipTM=0.197 tol=9.82
2024-07-09 09:25:59,836 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=24.7 pTM=0.212 ipTM=0.196 tol=7.91
2024-07-09 09:28:09,361 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=24.9 pTM=0.215 ipTM=0.196 tol=8.55
2024-07-09 09:30:18,889 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=24.8 pTM=0.216 ipTM=0.196 tol=5.41
2024-07-09 09:32:28,364 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=24.7 pTM=0.215 ipTM=0.198 tol=3.94
2024-07-09 09:34:37,863 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=24.7 pTM=0.215 ipTM=0.198 tol=6.51
2024-07-09 09:36:47,433 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=24.9 pTM=0.213 ipTM=0.194 tol=5.63
2024-07-09 09:38:56,946 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=24.7 pTM=0.217 ipTM=0.196 tol=9.7
2024-07-09 09:41:06,468 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=24.9 pTM=0.216 ipTM=0.195 tol=8.47
2024-07-09 09:43:16,025 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=25 pTM=0.214 ipTM=0.202 tol=5.48
2024-07-09 09:45:25,567 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=25.1 pTM=0.214 ipTM=0.21 tol=7.71
2024-07-09 09:47:35,111 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=24.8 pTM=0.215 ipTM=0.195 tol=4.9
2024-07-09 09:49:44,674 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=24.7 pTM=0.215 ipTM=0.196 tol=7.02
2024-07-09 09:49:44,676 alphafold2_multimer_v3_model_1_seed_000 took 4147.9s (30 recycles)
2024-07-09 09:51:56,004 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=24.6 pTM=0.21 ipTM=0.188
2024-07-09 09:54:05,497 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=25.2 pTM=0.206 ipTM=0.192 tol=28.6
2024-07-09 09:56:15,057 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=25.6 pTM=0.211 ipTM=0.219 tol=15.9
2024-07-09 09:58:24,616 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=25.8 pTM=0.212 ipTM=0.204 tol=14
2024-07-09 10:00:34,153 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=25.8 pTM=0.218 ipTM=0.215 tol=12.3
2024-07-09 10:02:43,700 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=26 pTM=0.218 ipTM=0.216 tol=9.78
2024-07-09 10:04:53,307 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=26.1 pTM=0.221 ipTM=0.202 tol=9.66
2024-07-09 10:07:02,867 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=26.1 pTM=0.222 ipTM=0.202 tol=16
2024-07-09 10:09:12,493 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=26.3 pTM=0.224 ipTM=0.209 tol=12.8
2024-07-09 10:11:22,097 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=26.3 pTM=0.226 ipTM=0.204 tol=9.98
2024-07-09 10:13:31,735 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=26.6 pTM=0.224 ipTM=0.203 tol=10.1
2024-07-09 10:15:41,364 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=26.4 pTM=0.226 ipTM=0.206 tol=8.85
2024-07-09 10:17:50,986 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=26.3 pTM=0.226 ipTM=0.206 tol=6.97
2024-07-09 10:20:00,595 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=26.3 pTM=0.226 ipTM=0.206 tol=7.73
2024-07-09 10:22:10,215 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=26.5 pTM=0.226 ipTM=0.207 tol=7.42
2024-07-09 10:24:19,825 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=26.4 pTM=0.224 ipTM=0.203 tol=5.59
2024-07-09 10:26:29,433 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=26.5 pTM=0.223 ipTM=0.208 tol=5.84
2024-07-09 10:28:39,042 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=26.5 pTM=0.223 ipTM=0.205 tol=7.69
2024-07-09 10:30:48,674 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=26.5 pTM=0.221 ipTM=0.204 tol=8.93
2024-07-09 10:32:58,308 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=26.2 pTM=0.222 ipTM=0.2 tol=10.5
2024-07-09 10:35:07,934 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=26.2 pTM=0.223 ipTM=0.202 tol=8.35
2024-07-09 10:37:17,587 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=26.2 pTM=0.223 ipTM=0.202 tol=7.44
2024-07-09 10:39:27,201 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=26.3 pTM=0.224 ipTM=0.202 tol=9.24
2024-07-09 10:41:36,844 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=26.4 pTM=0.223 ipTM=0.2 tol=10.5
2024-07-09 10:43:46,444 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=26.4 pTM=0.225 ipTM=0.202 tol=11
2024-07-09 10:45:56,052 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=26.2 pTM=0.226 ipTM=0.204 tol=10.2
2024-07-09 10:48:05,723 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=26.4 pTM=0.226 ipTM=0.202 tol=15.4
2024-07-09 10:50:15,409 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=26.7 pTM=0.225 ipTM=0.201 tol=9.94
2024-07-09 10:52:25,072 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=26.5 pTM=0.225 ipTM=0.202 tol=8.13
2024-07-09 10:54:34,726 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=26.4 pTM=0.225 ipTM=0.203 tol=8.12
2024-07-09 10:56:44,385 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=26.5 pTM=0.226 ipTM=0.204 tol=8.34
2024-07-09 10:56:44,387 alphafold2_multimer_v3_model_2_seed_000 took 4017.7s (30 recycles)
2024-07-09 10:58:56,630 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=23.8 pTM=0.21 ipTM=0.207
2024-07-09 11:01:07,254 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=24.4 pTM=0.196 ipTM=0.179 tol=28
2024-07-09 11:03:17,949 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=24.8 pTM=0.205 ipTM=0.2 tol=24.1
2024-07-09 11:05:28,701 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=23.9 pTM=0.202 ipTM=0.182 tol=28.6
2024-07-09 11:07:39,426 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=25.1 pTM=0.207 ipTM=0.201 tol=23.3
2024-07-09 11:09:50,244 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=25.1 pTM=0.211 ipTM=0.182 tol=14.8
2024-07-09 11:12:01,039 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=25.1 pTM=0.21 ipTM=0.192 tol=9.02
2024-07-09 11:14:11,812 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=25.1 pTM=0.211 ipTM=0.188 tol=9.3
2024-07-09 11:16:22,640 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=25 pTM=0.209 ipTM=0.183 tol=7.95
2024-07-09 11:18:33,383 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=25.1 pTM=0.21 ipTM=0.194 tol=10
2024-07-09 11:20:44,168 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=25.3 pTM=0.211 ipTM=0.183 tol=9.02
2024-07-09 11:22:54,896 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=25.5 pTM=0.213 ipTM=0.194 tol=8.77
2024-07-09 11:25:05,596 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=25.3 pTM=0.212 ipTM=0.194 tol=5.71
2024-07-09 11:27:16,364 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=25.4 pTM=0.214 ipTM=0.182 tol=7.48
2024-07-09 11:29:27,158 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=25.7 pTM=0.214 ipTM=0.183 tol=6.46
2024-07-09 11:31:37,920 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=25.7 pTM=0.214 ipTM=0.196 tol=6.47
2024-07-09 11:33:48,706 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=25.6 pTM=0.213 ipTM=0.182 tol=5.73
2024-07-09 11:35:59,480 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=25.5 pTM=0.214 ipTM=0.182 tol=6.82
2024-07-09 11:38:10,211 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=25.5 pTM=0.215 ipTM=0.19 tol=19.4
2024-07-09 11:40:20,943 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=25.5 pTM=0.214 ipTM=0.192 tol=15.8
2024-07-09 11:42:31,727 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=25.6 pTM=0.214 ipTM=0.185 tol=8.92
2024-07-09 11:44:42,501 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=25.7 pTM=0.213 ipTM=0.182 tol=4.97
2024-07-09 11:46:53,257 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=25.6 pTM=0.214 ipTM=0.186 tol=5.92
2024-07-09 11:49:03,986 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=25.5 pTM=0.214 ipTM=0.19 tol=5.68
2024-07-09 11:51:14,762 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=25.4 pTM=0.214 ipTM=0.185 tol=5.96
2024-07-09 11:53:25,550 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=25.6 pTM=0.214 ipTM=0.183 tol=6.64
2024-07-09 11:55:36,315 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=25.6 pTM=0.215 ipTM=0.186 tol=7.34
2024-07-09 11:57:47,029 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=25.6 pTM=0.215 ipTM=0.194 tol=17.6
2024-07-09 11:59:57,833 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=25.5 pTM=0.212 ipTM=0.189 tol=15.3
2024-07-09 12:02:08,618 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=25.3 pTM=0.212 ipTM=0.182 tol=12.2
2024-07-09 12:04:19,415 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=25.4 pTM=0.212 ipTM=0.18 tol=9.41
2024-07-09 12:04:19,417 alphafold2_multimer_v3_model_3_seed_000 took 4053.0s (30 recycles)
2024-07-09 12:06:32,243 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=23.4 pTM=0.193 ipTM=0.172
2024-07-09 12:08:43,318 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=25.2 pTM=0.199 ipTM=0.195 tol=25.1
2024-07-09 12:10:54,350 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=25.6 pTM=0.207 ipTM=0.187 tol=18.9
2024-07-09 12:13:05,432 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=25.4 pTM=0.207 ipTM=0.179 tol=17.7
2024-07-09 12:15:16,485 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=25.6 pTM=0.206 ipTM=0.184 tol=12.4
2024-07-09 12:17:27,464 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=26.1 pTM=0.209 ipTM=0.19 tol=9.42
2024-07-09 12:19:38,490 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=25.5 pTM=0.213 ipTM=0.187 tol=11.7
2024-07-09 12:21:49,451 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=26.4 pTM=0.214 ipTM=0.195 tol=10.1
2024-07-09 12:24:00,432 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=25.5 pTM=0.213 ipTM=0.185 tol=14.9
2024-07-09 12:26:11,342 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=26 pTM=0.213 ipTM=0.187 tol=9.3
2024-07-09 12:28:22,358 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=26 pTM=0.213 ipTM=0.183 tol=13.7
2024-07-09 12:30:33,347 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=26.2 pTM=0.217 ipTM=0.191 tol=8.51
2024-07-09 12:32:44,359 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=26.4 pTM=0.214 ipTM=0.19 tol=8.38
2024-07-09 12:34:55,358 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=26 pTM=0.215 ipTM=0.188 tol=8.97
2024-07-09 12:37:06,422 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=26.3 pTM=0.214 ipTM=0.193 tol=9.84
2024-07-09 12:39:17,526 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=26 pTM=0.213 ipTM=0.184 tol=13.5
2024-07-09 12:41:28,682 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=26.2 pTM=0.212 ipTM=0.184 tol=14
2024-07-09 12:43:39,813 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=26.3 pTM=0.214 ipTM=0.195 tol=14.3
2024-07-09 12:45:50,873 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=26.3 pTM=0.214 ipTM=0.187 tol=13.3
2024-07-09 12:48:01,913 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=26.7 pTM=0.214 ipTM=0.2 tol=11.3
2024-07-09 12:50:12,966 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=26.2 pTM=0.214 ipTM=0.188 tol=9.3
2024-07-09 12:52:24,030 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=26.2 pTM=0.213 ipTM=0.187 tol=15
2024-07-09 12:54:35,027 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=25.9 pTM=0.216 ipTM=0.191 tol=13.3
2024-07-09 12:56:46,051 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=25.8 pTM=0.214 ipTM=0.188 tol=13.8
2024-07-09 12:58:57,052 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=25.6 pTM=0.217 ipTM=0.19 tol=11.9
2024-07-09 13:01:08,038 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=25.8 pTM=0.214 ipTM=0.186 tol=9.07
2024-07-09 13:03:19,048 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=25.8 pTM=0.216 ipTM=0.19 tol=12.3
2024-07-09 13:05:30,033 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=25.5 pTM=0.215 ipTM=0.186 tol=15.2
2024-07-09 13:07:41,019 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=25.7 pTM=0.214 ipTM=0.187 tol=11.3
2024-07-09 13:09:52,085 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=25.5 pTM=0.215 ipTM=0.189 tol=9.82
2024-07-09 13:12:03,130 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=25.6 pTM=0.214 ipTM=0.186 tol=15.3
2024-07-09 13:12:03,132 alphafold2_multimer_v3_model_4_seed_000 took 4061.7s (30 recycles)
2024-07-09 13:14:15,780 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=24.6 pTM=0.197 ipTM=0.164
2024-07-09 13:16:26,605 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=25.1 pTM=0.198 ipTM=0.166 tol=25.3
2024-07-09 13:18:37,379 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=25 pTM=0.199 ipTM=0.168 tol=22.1
2024-07-09 13:20:48,194 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=25.1 pTM=0.199 ipTM=0.17 tol=17
2024-07-09 13:22:58,984 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=25 pTM=0.201 ipTM=0.172 tol=13.8
2024-07-09 13:25:09,806 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=25.2 pTM=0.202 ipTM=0.172 tol=12.4
2024-07-09 13:27:20,600 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=25 pTM=0.203 ipTM=0.172 tol=19.4
2024-07-09 13:29:31,358 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=25.1 pTM=0.204 ipTM=0.172 tol=17
2024-07-09 13:31:42,254 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=25 pTM=0.202 ipTM=0.172 tol=16.4
2024-07-09 13:33:53,071 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=25 pTM=0.204 ipTM=0.173 tol=14
2024-07-09 13:36:03,939 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=25.2 pTM=0.206 ipTM=0.174 tol=15.6
2024-07-09 13:38:14,767 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=25.2 pTM=0.207 ipTM=0.171 tol=13.2
2024-07-09 13:40:25,589 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=25.1 pTM=0.205 ipTM=0.172 tol=15.6
2024-07-09 13:42:36,356 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=25.2 pTM=0.207 ipTM=0.173 tol=14.1
2024-07-09 13:44:47,159 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=25.5 pTM=0.207 ipTM=0.173 tol=11.5
2024-07-09 13:46:57,970 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=25.4 pTM=0.207 ipTM=0.174 tol=12
2024-07-09 13:49:08,857 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=25.5 pTM=0.208 ipTM=0.172 tol=16.3
2024-07-09 13:51:19,669 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=25.5 pTM=0.211 ipTM=0.173 tol=12.4
2024-07-09 13:53:30,396 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=25.6 pTM=0.212 ipTM=0.174 tol=19.5
2024-07-09 13:55:41,191 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=25.4 pTM=0.212 ipTM=0.172 tol=10.8
2024-07-09 13:57:51,999 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=25.4 pTM=0.212 ipTM=0.173 tol=12.5
2024-07-09 14:00:02,806 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=25.5 pTM=0.213 ipTM=0.173 tol=9.32
2024-07-09 14:02:13,546 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=25.3 pTM=0.213 ipTM=0.174 tol=16.2
2024-07-09 14:04:24,318 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=25.2 pTM=0.212 ipTM=0.173 tol=13.3
2024-07-09 14:06:35,092 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=25.3 pTM=0.212 ipTM=0.173 tol=11.4
2024-07-09 14:08:45,872 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=25.4 pTM=0.213 ipTM=0.172 tol=15.4
2024-07-09 14:10:56,623 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=25.6 pTM=0.213 ipTM=0.173 tol=15.6
2024-07-09 14:13:07,369 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=25.3 pTM=0.212 ipTM=0.172 tol=13.5
2024-07-09 14:15:18,056 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=25 pTM=0.212 ipTM=0.173 tol=24.6
2024-07-09 14:17:28,864 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=24.8 pTM=0.211 ipTM=0.173 tol=19.2
2024-07-09 14:19:39,607 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=25 pTM=0.211 ipTM=0.172 tol=18.1
2024-07-09 14:19:39,609 alphafold2_multimer_v3_model_5_seed_000 took 4054.5s (30 recycles)
2024-07-09 14:19:41,631 reranking models by 'multimer' metric
2024-07-09 14:19:46,026 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 14:25:31,654 Relaxation took 350.0s
2024-07-09 14:25:31,654 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=26.5 pTM=0.226 ipTM=0.204
2024-07-09 14:31:29,562 Relaxation took 357.9s
2024-07-09 14:31:29,562 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=24.7 pTM=0.215 ipTM=0.196
2024-07-09 14:37:13,519 Relaxation took 344.0s
2024-07-09 14:37:13,519 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=25.6 pTM=0.214 ipTM=0.186
2024-07-09 14:43:56,368 Relaxation took 402.8s
2024-07-09 14:43:56,368 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=25.4 pTM=0.212 ipTM=0.18
2024-07-09 14:50:22,859 Relaxation took 386.5s
2024-07-09 14:50:22,859 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=25 pTM=0.211 ipTM=0.172
2024-07-09 14:50:27,495 Done