2024-07-09 09:18:31,432 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 09:18:31,751 Running on GPU
2024-07-09 09:18:35,524 Found 6 citations for tools or databases
2024-07-09 09:18:35,524 Query 1/1: COX2_ERF3B (length 855)
2024-07-09 09:18:36,525 Sleeping for 8s. Reason: PENDING
2024-07-09 09:18:44,934 Sleeping for 5s. Reason: RUNNING
2024-07-09 09:18:50,373 Sleeping for 9s. Reason: RUNNING
2024-07-09 09:18:59,803 Sleeping for 8s. Reason: RUNNING
2024-07-09 09:19:08,229 Sleeping for 8s. Reason: RUNNING
2024-07-09 09:19:16,638 Sleeping for 6s. Reason: RUNNING
2024-07-09 09:19:23,056 Sleeping for 10s. Reason: RUNNING
2024-07-09 09:19:33,489 Sleeping for 8s. Reason: RUNNING
2024-07-09 09:19:41,943 Sleeping for 5s. Reason: RUNNING
2024-07-09 09:19:47,361 Sleeping for 9s. Reason: RUNNING
2024-07-09 09:19:56,779 Sleeping for 10s. Reason: RUNNING
2024-07-09 09:20:07,193 Sleeping for 8s. Reason: RUNNING
2024-07-09 09:20:15,617 Sleeping for 9s. Reason: RUNNING
2024-07-09 09:20:25,049 Sleeping for 6s. Reason: RUNNING
2024-07-09 09:20:31,469 Sleeping for 9s. Reason: RUNNING
2024-07-09 09:20:40,915 Sleeping for 8s. Reason: RUNNING
2024-07-09 09:20:49,346 Sleeping for 9s. Reason: RUNNING
2024-07-09 09:20:58,765 Sleeping for 8s. Reason: RUNNING
2024-07-09 09:21:07,217 Sleeping for 8s. Reason: RUNNING
2024-07-09 09:21:15,639 Sleeping for 10s. Reason: RUNNING
2024-07-09 09:21:26,050 Sleeping for 5s. Reason: RUNNING
2024-07-09 09:21:31,469 Sleeping for 6s. Reason: RUNNING
2024-07-09 09:22:18,211 Sleeping for 8s. Reason: PENDING
2024-07-09 09:22:26,659 Sleeping for 5s. Reason: RUNNING
2024-07-09 09:22:32,080 Sleeping for 10s. Reason: RUNNING
2024-07-09 09:22:42,496 Sleeping for 8s. Reason: RUNNING
2024-07-09 09:22:52,044 Sleeping for 7s. Reason: RUNNING
2024-07-09 09:23:00,505 Sleeping for 9s. Reason: RUNNING
2024-07-09 09:23:09,968 Sleeping for 5s. Reason: RUNNING
2024-07-09 09:23:15,722 Sleeping for 5s. Reason: RUNNING
2024-07-09 09:23:21,129 Sleeping for 5s. Reason: RUNNING
2024-07-09 09:23:26,550 Sleeping for 8s. Reason: RUNNING
2024-07-09 09:23:34,970 Sleeping for 7s. Reason: RUNNING
2024-07-09 09:23:42,412 Sleeping for 10s. Reason: RUNNING
2024-07-09 09:23:52,853 Sleeping for 7s. Reason: RUNNING
2024-07-09 09:24:00,279 Sleeping for 7s. Reason: RUNNING
2024-07-09 09:24:07,701 Sleeping for 7s. Reason: RUNNING
2024-07-09 09:24:15,135 Sleeping for 6s. Reason: RUNNING
2024-07-09 09:24:21,542 Sleeping for 7s. Reason: RUNNING
2024-07-09 09:24:28,989 Sleeping for 10s. Reason: RUNNING
2024-07-09 09:24:39,400 Sleeping for 10s. Reason: RUNNING
2024-07-09 09:25:19,248 Setting max_seq=508, max_extra_seq=2048
2024-07-09 09:28:08,935 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.9 pTM=0.511 ipTM=0.312
2024-07-09 09:28:23,790 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.2 pTM=0.499 ipTM=0.282 tol=13.8
2024-07-09 09:28:38,709 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.5 pTM=0.463 ipTM=0.225 tol=6.09
2024-07-09 09:28:53,665 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.1 pTM=0.456 ipTM=0.204 tol=5.27
2024-07-09 09:29:08,639 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.4 pTM=0.461 ipTM=0.209 tol=3.05
2024-07-09 09:29:23,649 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.7 pTM=0.453 ipTM=0.191 tol=1.56
2024-07-09 09:29:38,659 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.6 pTM=0.459 ipTM=0.195 tol=1.95
2024-07-09 09:29:53,693 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.3 pTM=0.455 ipTM=0.186 tol=2.87
2024-07-09 09:30:08,722 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.6 pTM=0.461 ipTM=0.203 tol=2.54
2024-07-09 09:30:23,752 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.9 pTM=0.462 ipTM=0.199 tol=2.07
2024-07-09 09:30:38,783 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67 pTM=0.468 ipTM=0.22 tol=1.34
2024-07-09 09:30:53,835 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.4 pTM=0.447 ipTM=0.193 tol=1.89
2024-07-09 09:31:08,879 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.7 pTM=0.471 ipTM=0.224 tol=2.15
2024-07-09 09:31:23,916 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.8 pTM=0.474 ipTM=0.206 tol=1.52
2024-07-09 09:31:38,962 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.2 pTM=0.471 ipTM=0.226 tol=1.13
2024-07-09 09:31:54,015 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.7 pTM=0.452 ipTM=0.204 tol=1.44
2024-07-09 09:32:09,070 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.6 pTM=0.463 ipTM=0.224 tol=1.35
2024-07-09 09:32:24,124 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.9 pTM=0.463 ipTM=0.205 tol=1.34
2024-07-09 09:32:39,179 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.8 pTM=0.462 ipTM=0.219 tol=1.34
2024-07-09 09:32:54,231 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.8 pTM=0.458 ipTM=0.198 tol=0.918
2024-07-09 09:33:09,280 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.6 pTM=0.461 ipTM=0.217 tol=1.29
2024-07-09 09:33:24,341 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.6 pTM=0.458 ipTM=0.197 tol=1.51
2024-07-09 09:33:39,396 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.6 pTM=0.466 ipTM=0.212 tol=1.7
2024-07-09 09:33:54,456 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.6 pTM=0.457 ipTM=0.188 tol=1.47
2024-07-09 09:34:09,511 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.5 pTM=0.462 ipTM=0.208 tol=1.82
2024-07-09 09:34:24,572 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.6 pTM=0.46 ipTM=0.194 tol=1.09
2024-07-09 09:34:39,632 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67 pTM=0.468 ipTM=0.219 tol=2.09
2024-07-09 09:34:54,683 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.4 pTM=0.467 ipTM=0.214 tol=2.37
2024-07-09 09:35:09,741 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.9 pTM=0.464 ipTM=0.219 tol=1.69
2024-07-09 09:35:24,803 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.6 pTM=0.452 ipTM=0.194 tol=1.5
2024-07-09 09:35:39,862 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.6 pTM=0.464 ipTM=0.216 tol=1.13
2024-07-09 09:35:39,862 alphafold2_multimer_v3_model_1_seed_000 took 615.9s (30 recycles)
2024-07-09 09:35:55,405 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.4 pTM=0.473 ipTM=0.228
2024-07-09 09:36:10,493 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.3 pTM=0.479 ipTM=0.215 tol=7
2024-07-09 09:36:25,583 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.4 pTM=0.468 ipTM=0.201 tol=8.38
2024-07-09 09:36:40,680 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.9 pTM=0.464 ipTM=0.203 tol=4.54
2024-07-09 09:36:55,775 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.3 pTM=0.46 ipTM=0.2 tol=4.52
2024-07-09 09:37:10,869 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.9 pTM=0.469 ipTM=0.198 tol=3.57
2024-07-09 09:37:25,960 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.5 pTM=0.465 ipTM=0.203 tol=2.51
2024-07-09 09:37:41,043 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.8 pTM=0.467 ipTM=0.202 tol=3
2024-07-09 09:37:56,128 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.3 pTM=0.458 ipTM=0.197 tol=2.46
2024-07-09 09:38:11,213 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.9 pTM=0.471 ipTM=0.202 tol=2.56
2024-07-09 09:38:26,299 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.4 pTM=0.463 ipTM=0.205 tol=1.55
2024-07-09 09:38:41,373 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.6 pTM=0.467 ipTM=0.205 tol=2.85
2024-07-09 09:38:56,453 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.5 pTM=0.463 ipTM=0.201 tol=1.89
2024-07-09 09:39:11,536 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.9 pTM=0.472 ipTM=0.201 tol=2.91
2024-07-09 09:39:26,622 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.1 pTM=0.465 ipTM=0.196 tol=2.43
2024-07-09 09:39:41,704 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.4 pTM=0.472 ipTM=0.207 tol=1.91
2024-07-09 09:39:56,785 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.1 pTM=0.462 ipTM=0.201 tol=1.52
2024-07-09 09:40:11,870 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.7 pTM=0.47 ipTM=0.202 tol=2.42
2024-07-09 09:40:26,963 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.4 pTM=0.468 ipTM=0.2 tol=2.29
2024-07-09 09:40:42,056 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.6 pTM=0.471 ipTM=0.208 tol=2.45
2024-07-09 09:40:57,144 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.4 pTM=0.467 ipTM=0.206 tol=2.07
2024-07-09 09:41:12,234 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.8 pTM=0.472 ipTM=0.187 tol=3
2024-07-09 09:41:27,321 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.6 pTM=0.472 ipTM=0.198 tol=2.84
2024-07-09 09:41:42,412 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.6 pTM=0.482 ipTM=0.206 tol=3.03
2024-07-09 09:41:57,501 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67 pTM=0.469 ipTM=0.194 tol=1.5
2024-07-09 09:42:12,592 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.1 pTM=0.474 ipTM=0.191 tol=1.56
2024-07-09 09:42:27,680 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.6 pTM=0.471 ipTM=0.195 tol=1.7
2024-07-09 09:42:42,766 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.4 pTM=0.474 ipTM=0.189 tol=2.29
2024-07-09 09:42:57,858 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.9 pTM=0.466 ipTM=0.188 tol=3.31
2024-07-09 09:43:12,947 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.7 pTM=0.469 ipTM=0.192 tol=3.14
2024-07-09 09:43:28,034 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.5 pTM=0.469 ipTM=0.201 tol=1.96
2024-07-09 09:43:28,035 alphafold2_multimer_v3_model_2_seed_000 took 467.7s (30 recycles)
2024-07-09 09:43:43,581 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.2 pTM=0.481 ipTM=0.233
2024-07-09 09:43:58,667 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.7 pTM=0.452 ipTM=0.21 tol=9.09
2024-07-09 09:44:13,776 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.4 pTM=0.466 ipTM=0.197 tol=2.58
2024-07-09 09:44:28,884 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.9 pTM=0.456 ipTM=0.193 tol=3.24
2024-07-09 09:44:44,005 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.2 pTM=0.458 ipTM=0.192 tol=4.05
2024-07-09 09:44:59,115 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.6 pTM=0.462 ipTM=0.189 tol=3.95
2024-07-09 09:45:14,217 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.5 pTM=0.469 ipTM=0.189 tol=2.51
2024-07-09 09:45:29,323 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.4 pTM=0.479 ipTM=0.186 tol=3.84
2024-07-09 09:45:44,422 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.8 pTM=0.487 ipTM=0.198 tol=3.95
2024-07-09 09:45:59,469 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.3 pTM=0.566 ipTM=0.429 tol=7.57
2024-07-09 09:46:14,569 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.5 pTM=0.497 ipTM=0.197 tol=6.46
2024-07-09 09:46:29,673 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.2 pTM=0.493 ipTM=0.192 tol=5.68
2024-07-09 09:46:44,760 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68 pTM=0.495 ipTM=0.204 tol=3.31
2024-07-09 09:46:59,833 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.2 pTM=0.529 ipTM=0.3 tol=6.31
2024-07-09 09:47:14,919 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.2 pTM=0.496 ipTM=0.195 tol=5.26
2024-07-09 09:47:29,998 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.9 pTM=0.496 ipTM=0.205 tol=4.93
2024-07-09 09:47:45,063 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.4 pTM=0.547 ipTM=0.359 tol=5.84
2024-07-09 09:48:00,149 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.4 pTM=0.497 ipTM=0.199 tol=3.37
2024-07-09 09:48:15,230 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.1 pTM=0.493 ipTM=0.203 tol=4.15
2024-07-09 09:48:30,296 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.2 pTM=0.532 ipTM=0.313 tol=3.66
2024-07-09 09:48:45,379 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.4 pTM=0.5 ipTM=0.2 tol=6.6
2024-07-09 09:49:00,457 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.8 pTM=0.494 ipTM=0.201 tol=6.22
2024-07-09 09:49:15,524 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.8 pTM=0.507 ipTM=0.239 tol=3.63
2024-07-09 09:49:30,610 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.1 pTM=0.496 ipTM=0.19 tol=2.81
2024-07-09 09:49:45,672 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.8 pTM=0.511 ipTM=0.24 tol=2.84
2024-07-09 09:50:00,765 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.6 pTM=0.494 ipTM=0.189 tol=8.43
2024-07-09 09:50:15,829 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.6 pTM=0.495 ipTM=0.192 tol=4.99
2024-07-09 09:50:30,902 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.8 pTM=0.495 ipTM=0.199 tol=3.42
2024-07-09 09:50:45,984 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.9 pTM=0.49 ipTM=0.181 tol=2.97
2024-07-09 09:51:01,046 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.6 pTM=0.503 ipTM=0.224 tol=2.33
2024-07-09 09:51:16,131 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.9 pTM=0.489 ipTM=0.182 tol=3.34
2024-07-09 09:51:16,132 alphafold2_multimer_v3_model_3_seed_000 took 467.6s (30 recycles)
2024-07-09 09:51:31,603 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.7 pTM=0.591 ipTM=0.717
2024-07-09 09:51:46,692 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.2 pTM=0.485 ipTM=0.206 tol=11.1
2024-07-09 09:52:01,800 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.6 pTM=0.451 ipTM=0.191 tol=4.82
2024-07-09 09:52:16,894 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.2 pTM=0.419 ipTM=0.192 tol=6.72
2024-07-09 09:52:31,990 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.3 pTM=0.438 ipTM=0.193 tol=3.86
2024-07-09 09:52:47,076 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.4 pTM=0.447 ipTM=0.187 tol=3.59
2024-07-09 09:53:02,179 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64 pTM=0.436 ipTM=0.192 tol=4.5
2024-07-09 09:53:17,287 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.5 pTM=0.416 ipTM=0.18 tol=3.47
2024-07-09 09:53:32,389 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64 pTM=0.435 ipTM=0.189 tol=3.03
2024-07-09 09:53:47,498 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64 pTM=0.448 ipTM=0.183 tol=3.36
2024-07-09 09:54:02,606 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.4 pTM=0.445 ipTM=0.188 tol=4.02
2024-07-09 09:54:17,718 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.7 pTM=0.432 ipTM=0.18 tol=3.6
2024-07-09 09:54:32,823 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.1 pTM=0.442 ipTM=0.186 tol=2.88
2024-07-09 09:54:47,927 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.2 pTM=0.455 ipTM=0.184 tol=2.62
2024-07-09 09:55:03,025 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.9 pTM=0.439 ipTM=0.183 tol=2.96
2024-07-09 09:55:18,136 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.2 pTM=0.422 ipTM=0.178 tol=2.4
2024-07-09 09:55:33,242 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.7 pTM=0.436 ipTM=0.182 tol=2.22
2024-07-09 09:55:48,351 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.3 pTM=0.457 ipTM=0.184 tol=2.8
2024-07-09 09:56:03,464 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.9 pTM=0.443 ipTM=0.185 tol=3.64
2024-07-09 09:56:18,584 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.1 pTM=0.445 ipTM=0.182 tol=5.56
2024-07-09 09:56:33,694 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.9 pTM=0.443 ipTM=0.185 tol=4.2
2024-07-09 09:56:48,804 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.2 pTM=0.457 ipTM=0.185 tol=3.98
2024-07-09 09:57:03,912 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.1 pTM=0.445 ipTM=0.184 tol=2.97
2024-07-09 09:57:19,023 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.2 pTM=0.446 ipTM=0.186 tol=3.56
2024-07-09 09:57:34,136 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.2 pTM=0.442 ipTM=0.184 tol=2.5
2024-07-09 09:57:49,243 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.6 pTM=0.458 ipTM=0.184 tol=2.71
2024-07-09 09:58:04,363 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64 pTM=0.44 ipTM=0.178 tol=2.42
2024-07-09 09:58:19,468 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.3 pTM=0.451 ipTM=0.185 tol=2.13
2024-07-09 09:58:34,584 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.4 pTM=0.447 ipTM=0.183 tol=2.73
2024-07-09 09:58:49,692 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.1 pTM=0.452 ipTM=0.187 tol=2.66
2024-07-09 09:59:04,807 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.5 pTM=0.449 ipTM=0.187 tol=2.56
2024-07-09 09:59:04,808 alphafold2_multimer_v3_model_4_seed_000 took 468.2s (30 recycles)
2024-07-09 09:59:20,324 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.8 pTM=0.461 ipTM=0.184
2024-07-09 09:59:35,408 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.2 pTM=0.478 ipTM=0.229 tol=8.6
2024-07-09 09:59:50,484 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.6 pTM=0.457 ipTM=0.221 tol=5.2
2024-07-09 10:00:05,576 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.1 pTM=0.446 ipTM=0.175 tol=4.21
2024-07-09 10:00:20,657 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.3 pTM=0.488 ipTM=0.212 tol=3.34
2024-07-09 10:00:35,729 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.6 pTM=0.485 ipTM=0.203 tol=2.6
2024-07-09 10:00:50,807 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68 pTM=0.474 ipTM=0.202 tol=1.85
2024-07-09 10:01:05,880 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.6 pTM=0.467 ipTM=0.196 tol=1.74
2024-07-09 10:01:20,961 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.7 pTM=0.463 ipTM=0.192 tol=1.48
2024-07-09 10:01:36,043 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.3 pTM=0.456 ipTM=0.181 tol=1.09
2024-07-09 10:01:51,129 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.9 pTM=0.464 ipTM=0.189 tol=3.92
2024-07-09 10:02:06,217 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.4 pTM=0.458 ipTM=0.173 tol=4.5
2024-07-09 10:02:21,307 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.6 pTM=0.468 ipTM=0.176 tol=5.25
2024-07-09 10:02:36,405 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.2 pTM=0.464 ipTM=0.184 tol=4.19
2024-07-09 10:02:51,499 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.7 pTM=0.461 ipTM=0.18 tol=2.73
2024-07-09 10:03:06,603 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.2 pTM=0.46 ipTM=0.175 tol=1.96
2024-07-09 10:03:21,702 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.3 pTM=0.459 ipTM=0.178 tol=1.01
2024-07-09 10:03:36,808 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.5 pTM=0.433 ipTM=0.183 tol=2.05
2024-07-09 10:03:51,915 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.1 pTM=0.428 ipTM=0.184 tol=2.78
2024-07-09 10:04:07,026 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.5 pTM=0.424 ipTM=0.184 tol=1.85
2024-07-09 10:04:22,120 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.9 pTM=0.466 ipTM=0.176 tol=2.96
2024-07-09 10:04:37,214 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.3 pTM=0.471 ipTM=0.178 tol=3.29
2024-07-09 10:04:52,298 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.6 pTM=0.471 ipTM=0.19 tol=5.46
2024-07-09 10:05:07,377 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.6 pTM=0.472 ipTM=0.21 tol=2.61
2024-07-09 10:05:22,453 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.6 pTM=0.467 ipTM=0.211 tol=2.03
2024-07-09 10:05:37,538 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.9 pTM=0.448 ipTM=0.179 tol=2.18
2024-07-09 10:05:52,610 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.8 pTM=0.467 ipTM=0.197 tol=2.32
2024-07-09 10:06:07,706 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.3 pTM=0.448 ipTM=0.191 tol=3.75
2024-07-09 10:06:22,798 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.2 pTM=0.452 ipTM=0.177 tol=1.47
2024-07-09 10:06:37,861 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66 pTM=0.458 ipTM=0.237 tol=5.55
2024-07-09 10:06:52,958 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.2 pTM=0.449 ipTM=0.201 tol=4.03
2024-07-09 10:06:52,959 alphafold2_multimer_v3_model_5_seed_000 took 467.7s (30 recycles)
2024-07-09 10:06:53,420 reranking models by 'multimer' metric
2024-07-09 10:06:56,818 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 10:07:31,588 Relaxation took 38.2s
2024-07-09 10:07:31,589 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.6 pTM=0.464 ipTM=0.216
2024-07-09 10:08:19,266 Relaxation took 47.7s
2024-07-09 10:08:19,266 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.5 pTM=0.469 ipTM=0.201
2024-07-09 10:09:04,897 Relaxation took 45.6s
2024-07-09 10:09:04,897 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.2 pTM=0.449 ipTM=0.201
2024-07-09 10:09:58,994 Relaxation took 54.1s
2024-07-09 10:09:58,995 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.9 pTM=0.489 ipTM=0.182
2024-07-09 10:10:40,273 Relaxation took 41.3s
2024-07-09 10:10:40,273 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.5 pTM=0.449 ipTM=0.187
2024-07-09 10:10:41,741 Done