2024-07-09 11:26:21,660 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 11:26:21,987 Running on GPU
2024-07-09 11:26:26,157 Found 6 citations for tools or databases
2024-07-09 11:26:26,158 Query 1/1: CR063_UPP (length 994)
2024-07-09 11:26:26,662 Sleeping for 6s. Reason: PENDING
2024-07-09 11:26:33,325 Sleeping for 8s. Reason: RUNNING
2024-07-09 11:26:41,766 Sleeping for 5s. Reason: RUNNING
2024-07-09 11:26:47,193 Sleeping for 5s. Reason: RUNNING
2024-07-09 11:26:52,609 Sleeping for 9s. Reason: RUNNING
2024-07-09 11:27:02,027 Sleeping for 9s. Reason: RUNNING
2024-07-09 11:27:11,467 Sleeping for 5s. Reason: RUNNING
2024-07-09 11:27:16,888 Sleeping for 5s. Reason: RUNNING
2024-07-09 11:27:22,318 Sleeping for 9s. Reason: RUNNING
2024-07-09 11:27:31,744 Sleeping for 10s. Reason: RUNNING
2024-07-09 11:27:42,173 Sleeping for 7s. Reason: RUNNING
2024-07-09 11:27:49,609 Sleeping for 7s. Reason: RUNNING
2024-07-09 11:27:57,040 Sleeping for 5s. Reason: RUNNING
2024-07-09 11:28:04,914 Sleeping for 7s. Reason: PENDING
2024-07-09 11:28:12,356 Sleeping for 9s. Reason: RUNNING
2024-07-09 11:28:21,805 Sleeping for 8s. Reason: RUNNING
2024-07-09 11:28:30,219 Sleeping for 5s. Reason: RUNNING
2024-07-09 11:28:35,664 Sleeping for 5s. Reason: RUNNING
2024-07-09 11:28:41,078 Sleeping for 9s. Reason: RUNNING
2024-07-09 11:28:50,702 Sleeping for 8s. Reason: RUNNING
2024-07-09 11:28:59,158 Sleeping for 9s. Reason: RUNNING
2024-07-09 11:29:10,610 Setting max_seq=508, max_extra_seq=2048
2024-07-09 11:32:00,356 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.2 pTM=0.402 ipTM=0.195
2024-07-09 11:32:22,942 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52.4 pTM=0.401 ipTM=0.197 tol=18.4
2024-07-09 11:32:45,607 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52.2 pTM=0.402 ipTM=0.2 tol=6.48
2024-07-09 11:33:08,334 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.3 pTM=0.396 ipTM=0.19 tol=4.01
2024-07-09 11:33:31,068 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52.4 pTM=0.399 ipTM=0.197 tol=3.65
2024-07-09 11:33:53,847 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=52.5 pTM=0.398 ipTM=0.193 tol=4.01
2024-07-09 11:34:16,660 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.5 pTM=0.398 ipTM=0.195 tol=3.26
2024-07-09 11:34:39,485 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.4 pTM=0.401 ipTM=0.237 tol=5.35
2024-07-09 11:35:02,313 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.7 pTM=0.398 ipTM=0.193 tol=5.1
2024-07-09 11:35:25,162 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.7 pTM=0.402 ipTM=0.204 tol=6.53
2024-07-09 11:35:48,010 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.8 pTM=0.398 ipTM=0.194 tol=5.76
2024-07-09 11:36:10,861 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.8 pTM=0.399 ipTM=0.205 tol=4.59
2024-07-09 11:36:33,707 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.7 pTM=0.4 ipTM=0.206 tol=2.11
2024-07-09 11:36:56,561 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.7 pTM=0.4 ipTM=0.216 tol=2.85
2024-07-09 11:37:19,403 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.8 pTM=0.398 ipTM=0.203 tol=4.19
2024-07-09 11:37:42,267 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.7 pTM=0.398 ipTM=0.192 tol=4.95
2024-07-09 11:38:05,133 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.6 pTM=0.399 ipTM=0.197 tol=2.65
2024-07-09 11:38:27,990 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.5 pTM=0.399 ipTM=0.195 tol=2.45
2024-07-09 11:38:50,876 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.6 pTM=0.397 ipTM=0.191 tol=4.93
2024-07-09 11:39:13,741 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.6 pTM=0.398 ipTM=0.193 tol=2.53
2024-07-09 11:39:36,608 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.7 pTM=0.397 ipTM=0.191 tol=5.3
2024-07-09 11:39:59,446 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.7 pTM=0.4 ipTM=0.197 tol=4.62
2024-07-09 11:40:22,311 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.7 pTM=0.399 ipTM=0.192 tol=3.41
2024-07-09 11:40:45,168 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.9 pTM=0.401 ipTM=0.199 tol=3.14
2024-07-09 11:41:08,020 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.5 pTM=0.399 ipTM=0.194 tol=4.45
2024-07-09 11:41:30,840 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.6 pTM=0.401 ipTM=0.2 tol=4.56
2024-07-09 11:41:53,665 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.4 pTM=0.399 ipTM=0.198 tol=4.95
2024-07-09 11:42:16,475 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.5 pTM=0.401 ipTM=0.2 tol=2.03
2024-07-09 11:42:39,302 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.7 pTM=0.398 ipTM=0.191 tol=5.82
2024-07-09 11:43:02,148 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.7 pTM=0.401 ipTM=0.196 tol=2.95
2024-07-09 11:43:24,984 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.5 pTM=0.4 ipTM=0.198 tol=5.42
2024-07-09 11:43:24,984 alphafold2_multimer_v3_model_1_seed_000 took 849.1s (30 recycles)
2024-07-09 11:43:48,414 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.5 pTM=0.406 ipTM=0.18
2024-07-09 11:44:11,281 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.5 pTM=0.404 ipTM=0.186 tol=17.7
2024-07-09 11:44:34,150 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.6 pTM=0.408 ipTM=0.203 tol=9.83
2024-07-09 11:44:57,023 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.7 pTM=0.406 ipTM=0.201 tol=7.32
2024-07-09 11:45:19,905 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.8 pTM=0.409 ipTM=0.206 tol=5.48
2024-07-09 11:45:42,764 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.9 pTM=0.409 ipTM=0.205 tol=6.21
2024-07-09 11:46:05,642 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.9 pTM=0.408 ipTM=0.206 tol=5.16
2024-07-09 11:46:28,519 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.9 pTM=0.406 ipTM=0.199 tol=6.15
2024-07-09 11:46:51,394 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54 pTM=0.406 ipTM=0.2 tol=3.96
2024-07-09 11:47:14,258 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.2 pTM=0.407 ipTM=0.205 tol=4.96
2024-07-09 11:47:37,127 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54 pTM=0.406 ipTM=0.201 tol=3.16
2024-07-09 11:47:59,981 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.1 pTM=0.407 ipTM=0.205 tol=4.02
2024-07-09 11:48:22,845 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.8 pTM=0.406 ipTM=0.205 tol=3.84
2024-07-09 11:48:45,728 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.1 pTM=0.407 ipTM=0.205 tol=3.13
2024-07-09 11:49:08,623 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54 pTM=0.406 ipTM=0.201 tol=3.89
2024-07-09 11:49:31,514 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54 pTM=0.406 ipTM=0.2 tol=6.88
2024-07-09 11:49:54,415 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.9 pTM=0.406 ipTM=0.204 tol=7.6
2024-07-09 11:50:17,309 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54 pTM=0.407 ipTM=0.205 tol=5.8
2024-07-09 11:50:40,210 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.9 pTM=0.407 ipTM=0.206 tol=7.05
2024-07-09 11:51:03,111 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.1 pTM=0.406 ipTM=0.2 tol=6.33
2024-07-09 11:51:26,016 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.2 pTM=0.407 ipTM=0.204 tol=8.04
2024-07-09 11:51:48,886 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.2 pTM=0.408 ipTM=0.206 tol=3.14
2024-07-09 11:52:11,778 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54 pTM=0.406 ipTM=0.201 tol=3.21
2024-07-09 11:52:34,642 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.1 pTM=0.407 ipTM=0.203 tol=2.55
2024-07-09 11:52:57,525 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54 pTM=0.41 ipTM=0.21 tol=3.69
2024-07-09 11:53:20,417 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54 pTM=0.408 ipTM=0.207 tol=2.88
2024-07-09 11:53:43,290 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.8 pTM=0.406 ipTM=0.203 tol=6.45
2024-07-09 11:54:06,192 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.9 pTM=0.408 ipTM=0.208 tol=4.16
2024-07-09 11:54:29,094 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.9 pTM=0.409 ipTM=0.206 tol=6.59
2024-07-09 11:54:51,984 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.8 pTM=0.407 ipTM=0.202 tol=3.9
2024-07-09 11:55:14,864 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.9 pTM=0.407 ipTM=0.203 tol=3.14
2024-07-09 11:55:14,865 alphafold2_multimer_v3_model_2_seed_000 took 709.3s (30 recycles)
2024-07-09 11:55:38,411 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.7 pTM=0.4 ipTM=0.187
2024-07-09 11:56:01,381 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.7 pTM=0.388 ipTM=0.149 tol=18.1
2024-07-09 11:56:24,364 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.1 pTM=0.394 ipTM=0.171 tol=11.5
2024-07-09 11:56:47,337 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.2 pTM=0.397 ipTM=0.177 tol=5.87
2024-07-09 11:57:10,316 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.1 pTM=0.401 ipTM=0.189 tol=5.7
2024-07-09 11:57:33,273 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.2 pTM=0.402 ipTM=0.191 tol=5.48
2024-07-09 11:57:56,250 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.1 pTM=0.4 ipTM=0.191 tol=5.72
2024-07-09 11:58:19,178 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.1 pTM=0.401 ipTM=0.214 tol=7.73
2024-07-09 11:58:42,101 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.5 pTM=0.399 ipTM=0.187 tol=7.47
2024-07-09 11:59:05,062 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.3 pTM=0.401 ipTM=0.19 tol=6.86
2024-07-09 11:59:28,040 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.2 pTM=0.401 ipTM=0.191 tol=5.77
2024-07-09 11:59:51,004 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.1 pTM=0.4 ipTM=0.227 tol=9.32
2024-07-09 12:00:13,946 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.1 pTM=0.402 ipTM=0.201 tol=7.29
2024-07-09 12:00:36,925 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53 pTM=0.401 ipTM=0.192 tol=6.17
2024-07-09 12:00:59,881 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.1 pTM=0.402 ipTM=0.225 tol=6.34
2024-07-09 12:01:22,864 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.2 pTM=0.399 ipTM=0.204 tol=7.16
2024-07-09 12:01:45,842 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.1 pTM=0.401 ipTM=0.197 tol=7.29
2024-07-09 12:02:08,845 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53 pTM=0.4 ipTM=0.187 tol=8.05
2024-07-09 12:02:31,878 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.2 pTM=0.402 ipTM=0.194 tol=4.2
2024-07-09 12:02:54,868 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.2 pTM=0.402 ipTM=0.205 tol=6.65
2024-07-09 12:03:17,832 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53 pTM=0.406 ipTM=0.216 tol=6.24
2024-07-09 12:03:40,841 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.1 pTM=0.4 ipTM=0.195 tol=3.76
2024-07-09 12:04:03,863 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53 pTM=0.401 ipTM=0.193 tol=7.52
2024-07-09 12:04:26,844 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53 pTM=0.4 ipTM=0.213 tol=7.63
2024-07-09 12:04:49,859 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.9 pTM=0.402 ipTM=0.195 tol=4.41
2024-07-09 12:05:12,878 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53 pTM=0.4 ipTM=0.191 tol=5.32
2024-07-09 12:05:35,883 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.1 pTM=0.399 ipTM=0.198 tol=4.69
2024-07-09 12:05:58,902 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.1 pTM=0.397 ipTM=0.183 tol=3.44
2024-07-09 12:06:21,889 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.2 pTM=0.401 ipTM=0.19 tol=7
2024-07-09 12:06:44,867 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53 pTM=0.399 ipTM=0.186 tol=3.8
2024-07-09 12:07:07,850 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.2 pTM=0.398 ipTM=0.185 tol=2.94
2024-07-09 12:07:07,851 alphafold2_multimer_v3_model_3_seed_000 took 712.4s (30 recycles)
2024-07-09 12:07:31,319 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.2 pTM=0.412 ipTM=0.238
2024-07-09 12:07:54,207 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.2 pTM=0.421 ipTM=0.262 tol=14.8
2024-07-09 12:08:17,109 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.7 pTM=0.397 ipTM=0.188 tol=12.9
2024-07-09 12:08:40,005 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.5 pTM=0.413 ipTM=0.244 tol=10.1
2024-07-09 12:09:02,926 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.7 pTM=0.403 ipTM=0.205 tol=5.15
2024-07-09 12:09:25,853 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.3 pTM=0.413 ipTM=0.24 tol=5.31
2024-07-09 12:09:48,783 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.8 pTM=0.404 ipTM=0.211 tol=7.4
2024-07-09 12:10:11,693 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.6 pTM=0.415 ipTM=0.25 tol=7.49
2024-07-09 12:10:34,634 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.6 pTM=0.402 ipTM=0.202 tol=7.38
2024-07-09 12:10:57,569 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.6 pTM=0.41 ipTM=0.228 tol=7.3
2024-07-09 12:11:20,518 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.4 pTM=0.404 ipTM=0.206 tol=3.8
2024-07-09 12:11:43,475 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.2 pTM=0.41 ipTM=0.224 tol=6.13
2024-07-09 12:12:06,441 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.4 pTM=0.402 ipTM=0.203 tol=5.59
2024-07-09 12:12:29,409 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52 pTM=0.409 ipTM=0.222 tol=6.3
2024-07-09 12:12:52,380 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.4 pTM=0.404 ipTM=0.206 tol=6.5
2024-07-09 12:13:15,350 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.1 pTM=0.411 ipTM=0.226 tol=5.89
2024-07-09 12:13:38,302 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.4 pTM=0.404 ipTM=0.206 tol=5.09
2024-07-09 12:14:01,267 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.8 pTM=0.409 ipTM=0.22 tol=5.95
2024-07-09 12:14:24,229 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.2 pTM=0.405 ipTM=0.21 tol=4.77
2024-07-09 12:14:47,192 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52 pTM=0.411 ipTM=0.228 tol=7.51
2024-07-09 12:15:10,170 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52 pTM=0.405 ipTM=0.212 tol=6.5
2024-07-09 12:15:33,153 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52 pTM=0.41 ipTM=0.227 tol=7.86
2024-07-09 12:15:56,143 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.2 pTM=0.403 ipTM=0.204 tol=4.88
2024-07-09 12:16:19,108 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=51.9 pTM=0.411 ipTM=0.224 tol=6.73
2024-07-09 12:16:42,079 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.1 pTM=0.404 ipTM=0.207 tol=7.78
2024-07-09 12:17:05,055 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52 pTM=0.41 ipTM=0.229 tol=6.8
2024-07-09 12:17:28,046 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.3 pTM=0.403 ipTM=0.206 tol=6.48
2024-07-09 12:17:51,032 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.9 pTM=0.409 ipTM=0.222 tol=6.8
2024-07-09 12:18:14,029 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.1 pTM=0.403 ipTM=0.206 tol=6.2
2024-07-09 12:18:37,007 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.9 pTM=0.41 ipTM=0.225 tol=6.72
2024-07-09 12:19:00,011 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52 pTM=0.404 ipTM=0.208 tol=4.7
2024-07-09 12:19:00,012 alphafold2_multimer_v3_model_4_seed_000 took 711.5s (30 recycles)
2024-07-09 12:19:23,591 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.4 pTM=0.411 ipTM=0.212
2024-07-09 12:19:46,602 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.4 pTM=0.412 ipTM=0.182 tol=12.6
2024-07-09 12:20:09,619 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54 pTM=0.414 ipTM=0.193 tol=6.69
2024-07-09 12:20:32,681 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.7 pTM=0.417 ipTM=0.203 tol=14.2
2024-07-09 12:20:55,717 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.9 pTM=0.421 ipTM=0.22 tol=11.8
2024-07-09 12:21:18,724 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.8 pTM=0.422 ipTM=0.219 tol=6.27
2024-07-09 12:21:41,746 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.8 pTM=0.422 ipTM=0.22 tol=6.73
2024-07-09 12:22:04,725 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.9 pTM=0.421 ipTM=0.22 tol=2.5
2024-07-09 12:22:27,715 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.9 pTM=0.422 ipTM=0.222 tol=7.84
2024-07-09 12:22:50,708 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.1 pTM=0.424 ipTM=0.224 tol=2.72
2024-07-09 12:23:13,701 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.9 pTM=0.422 ipTM=0.222 tol=7.1
2024-07-09 12:23:36,662 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.8 pTM=0.424 ipTM=0.227 tol=6.91
2024-07-09 12:23:59,644 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.9 pTM=0.423 ipTM=0.222 tol=7.5
2024-07-09 12:24:22,624 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54 pTM=0.424 ipTM=0.223 tol=8.45
2024-07-09 12:24:45,609 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.9 pTM=0.422 ipTM=0.22 tol=4.91
2024-07-09 12:25:08,573 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.9 pTM=0.422 ipTM=0.221 tol=7.19
2024-07-09 12:25:31,583 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.9 pTM=0.423 ipTM=0.223 tol=7.24
2024-07-09 12:25:54,576 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.6 pTM=0.422 ipTM=0.225 tol=5.68
2024-07-09 12:26:17,570 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.7 pTM=0.422 ipTM=0.222 tol=2.62
2024-07-09 12:26:40,557 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.7 pTM=0.422 ipTM=0.223 tol=2.91
2024-07-09 12:27:03,522 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.7 pTM=0.423 ipTM=0.224 tol=6.77
2024-07-09 12:27:26,506 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.8 pTM=0.422 ipTM=0.223 tol=2.89
2024-07-09 12:27:49,507 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.9 pTM=0.421 ipTM=0.22 tol=4.45
2024-07-09 12:28:12,491 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.8 pTM=0.421 ipTM=0.22 tol=7.1
2024-07-09 12:28:35,492 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.7 pTM=0.421 ipTM=0.221 tol=7.68
2024-07-09 12:28:58,466 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.8 pTM=0.42 ipTM=0.22 tol=3.67
2024-07-09 12:29:21,474 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.7 pTM=0.422 ipTM=0.223 tol=4.05
2024-07-09 12:29:44,467 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.8 pTM=0.422 ipTM=0.219 tol=5.76
2024-07-09 12:30:07,459 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.8 pTM=0.422 ipTM=0.221 tol=7.98
2024-07-09 12:30:30,444 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.7 pTM=0.421 ipTM=0.22 tol=3.87
2024-07-09 12:30:53,403 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.7 pTM=0.422 ipTM=0.224 tol=8.27
2024-07-09 12:30:53,404 alphafold2_multimer_v3_model_5_seed_000 took 712.8s (30 recycles)
2024-07-09 12:30:54,016 reranking models by 'multimer' metric
2024-07-09 12:30:58,130 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 12:32:42,915 Relaxation took 108.9s
2024-07-09 12:32:42,915 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.7 pTM=0.422 ipTM=0.224
2024-07-09 12:34:17,754 Relaxation took 94.8s
2024-07-09 12:34:17,754 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52 pTM=0.404 ipTM=0.208
2024-07-09 12:35:30,864 Relaxation took 73.1s
2024-07-09 12:35:30,865 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.9 pTM=0.407 ipTM=0.203
2024-07-09 12:37:03,253 Relaxation took 92.4s
2024-07-09 12:37:03,253 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.5 pTM=0.4 ipTM=0.198
2024-07-09 12:38:47,566 Relaxation took 104.3s
2024-07-09 12:38:47,567 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.2 pTM=0.398 ipTM=0.185
2024-07-09 12:38:49,318 Done