2024-07-09 11:29:21,246 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 11:29:21,586 Running on GPU
2024-07-09 11:29:25,809 Found 6 citations for tools or databases
2024-07-09 11:29:25,809 Query 1/1: CREB3_NBPFE (length 1292)
2024-07-09 11:29:26,273 Sleeping for 10s. Reason: PENDING
2024-07-09 11:29:36,734 Sleeping for 9s. Reason: RUNNING
2024-07-09 11:29:46,161 Sleeping for 7s. Reason: RUNNING
2024-07-09 11:29:54,066 Sleeping for 10s. Reason: RUNNING
2024-07-09 11:30:04,500 Sleeping for 7s. Reason: RUNNING
2024-07-09 11:30:11,913 Sleeping for 7s. Reason: RUNNING
2024-07-09 11:30:19,349 Sleeping for 8s. Reason: RUNNING
2024-07-09 11:30:28,285 Sleeping for 10s. Reason: RUNNING
2024-07-09 11:30:45,925 Sleeping for 8s. Reason: PENDING
2024-07-09 11:30:54,345 Sleeping for 9s. Reason: RUNNING
2024-07-09 11:31:03,765 Sleeping for 7s. Reason: RUNNING
2024-07-09 11:31:13,191 Setting max_seq=508, max_extra_seq=2048
2024-07-09 11:34:05,010 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=25 pTM=0.219 ipTM=0.169
2024-07-09 11:34:48,173 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=24.7 pTM=0.214 ipTM=0.171 tol=14.2
2024-07-09 11:35:31,466 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=24.7 pTM=0.217 ipTM=0.171 tol=10.7
2024-07-09 11:36:14,885 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=24.2 pTM=0.216 ipTM=0.184 tol=10
2024-07-09 11:36:58,299 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=24.9 pTM=0.222 ipTM=0.211 tol=12
2024-07-09 11:37:41,673 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=24.8 pTM=0.219 ipTM=0.198 tol=7.91
2024-07-09 11:38:25,122 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=24.6 pTM=0.227 ipTM=0.231 tol=11.1
2024-07-09 11:39:08,537 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=25.2 pTM=0.227 ipTM=0.23 tol=12.2
2024-07-09 11:39:51,957 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=25.1 pTM=0.227 ipTM=0.229 tol=10.2
2024-07-09 11:40:35,411 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=24.8 pTM=0.223 ipTM=0.215 tol=7.57
2024-07-09 11:41:18,867 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=24.9 pTM=0.223 ipTM=0.209 tol=9.75
2024-07-09 11:42:02,301 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=25.3 pTM=0.22 ipTM=0.2 tol=10.6
2024-07-09 11:42:45,703 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=25.4 pTM=0.222 ipTM=0.209 tol=7.28
2024-07-09 11:43:29,139 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=24.6 pTM=0.218 ipTM=0.197 tol=5.7
2024-07-09 11:44:12,605 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=24.6 pTM=0.222 ipTM=0.211 tol=5.4
2024-07-09 11:44:56,055 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=25.1 pTM=0.223 ipTM=0.218 tol=7.19
2024-07-09 11:45:39,537 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=24.7 pTM=0.221 ipTM=0.205 tol=7.15
2024-07-09 11:46:22,996 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=25.3 pTM=0.221 ipTM=0.212 tol=13
2024-07-09 11:47:06,438 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=24.7 pTM=0.222 ipTM=0.208 tol=10.6
2024-07-09 11:47:49,949 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=25 pTM=0.222 ipTM=0.207 tol=4.52
2024-07-09 11:48:33,492 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=25 pTM=0.222 ipTM=0.209 tol=5.22
2024-07-09 11:49:16,942 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=24.6 pTM=0.221 ipTM=0.202 tol=5.57
2024-07-09 11:50:00,392 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=24.7 pTM=0.221 ipTM=0.205 tol=6.64
2024-07-09 11:50:43,855 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=25.2 pTM=0.22 ipTM=0.214 tol=7.13
2024-07-09 11:51:27,302 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=24.6 pTM=0.222 ipTM=0.211 tol=6.64
2024-07-09 11:52:10,751 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=24.9 pTM=0.223 ipTM=0.212 tol=6.88
2024-07-09 11:52:54,196 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=25.1 pTM=0.224 ipTM=0.22 tol=10.1
2024-07-09 11:53:37,708 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=24.5 pTM=0.221 ipTM=0.201 tol=7.04
2024-07-09 11:54:21,195 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=24.9 pTM=0.224 ipTM=0.218 tol=6.55
2024-07-09 11:55:04,663 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=25.1 pTM=0.224 ipTM=0.216 tol=5.93
2024-07-09 11:55:48,144 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=24.4 pTM=0.224 ipTM=0.214 tol=10.1
2024-07-09 11:55:48,145 alphafold2_multimer_v3_model_1_seed_000 took 1469.5s (30 recycles)
2024-07-09 11:56:32,573 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=23.9 pTM=0.215 ipTM=0.155
2024-07-09 11:57:16,221 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=25 pTM=0.212 ipTM=0.156 tol=22.3
2024-07-09 11:57:59,845 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=24.9 pTM=0.212 ipTM=0.153 tol=17.9
2024-07-09 11:58:43,497 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=24.8 pTM=0.211 ipTM=0.152 tol=13.5
2024-07-09 11:59:27,131 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=25.7 pTM=0.209 ipTM=0.164 tol=11.3
2024-07-09 12:00:10,715 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=25.8 pTM=0.209 ipTM=0.152 tol=8.8
2024-07-09 12:00:54,323 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=25.3 pTM=0.212 ipTM=0.155 tol=10.3
2024-07-09 12:01:37,966 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=26.1 pTM=0.209 ipTM=0.157 tol=12.4
2024-07-09 12:02:21,617 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=25.4 pTM=0.209 ipTM=0.155 tol=8.12
2024-07-09 12:03:05,282 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=25.4 pTM=0.21 ipTM=0.154 tol=7.75
2024-07-09 12:03:48,919 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=26.1 pTM=0.21 ipTM=0.162 tol=6.56
2024-07-09 12:04:32,548 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=25.8 pTM=0.21 ipTM=0.156 tol=8.3
2024-07-09 12:05:16,186 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=25.5 pTM=0.212 ipTM=0.154 tol=10.4
2024-07-09 12:05:59,802 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=25.9 pTM=0.21 ipTM=0.158 tol=9.59
2024-07-09 12:06:43,417 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=25.8 pTM=0.208 ipTM=0.155 tol=8.88
2024-07-09 12:07:27,043 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=25.2 pTM=0.208 ipTM=0.153 tol=10.3
2024-07-09 12:08:10,705 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=25.2 pTM=0.208 ipTM=0.155 tol=10.5
2024-07-09 12:08:54,368 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=25.3 pTM=0.209 ipTM=0.157 tol=14.3
2024-07-09 12:09:38,029 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=25.2 pTM=0.21 ipTM=0.157 tol=10.4
2024-07-09 12:10:21,705 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=24.9 pTM=0.209 ipTM=0.158 tol=11.9
2024-07-09 12:11:05,386 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=25.6 pTM=0.208 ipTM=0.16 tol=14.5
2024-07-09 12:11:49,106 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=25.2 pTM=0.209 ipTM=0.159 tol=17
2024-07-09 12:12:32,766 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=25.1 pTM=0.21 ipTM=0.157 tol=14.2
2024-07-09 12:13:16,484 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=25.1 pTM=0.21 ipTM=0.159 tol=11.1
2024-07-09 12:14:00,158 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=25.8 pTM=0.208 ipTM=0.16 tol=16.9
2024-07-09 12:14:43,785 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=25.7 pTM=0.208 ipTM=0.162 tol=9.42
2024-07-09 12:15:27,444 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=25 pTM=0.209 ipTM=0.162 tol=9.63
2024-07-09 12:16:11,103 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=25.2 pTM=0.209 ipTM=0.16 tol=11
2024-07-09 12:16:54,741 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=25.3 pTM=0.209 ipTM=0.16 tol=14.1
2024-07-09 12:17:38,363 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=25.9 pTM=0.21 ipTM=0.16 tol=14.2
2024-07-09 12:18:22,006 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=25.7 pTM=0.209 ipTM=0.159 tol=13.5
2024-07-09 12:18:22,007 alphafold2_multimer_v3_model_2_seed_000 took 1352.9s (30 recycles)
2024-07-09 12:19:06,728 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=26.1 pTM=0.255 ipTM=0.316
2024-07-09 12:19:50,678 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=26.2 pTM=0.251 ipTM=0.263 tol=27.1
2024-07-09 12:20:34,660 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=27.1 pTM=0.26 ipTM=0.294 tol=22
2024-07-09 12:21:18,592 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=25.9 pTM=0.253 ipTM=0.269 tol=15
2024-07-09 12:22:02,538 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=26.9 pTM=0.27 ipTM=0.319 tol=15.5
2024-07-09 12:22:46,515 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=26.4 pTM=0.258 ipTM=0.295 tol=11.7
2024-07-09 12:23:30,450 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=26.8 pTM=0.269 ipTM=0.323 tol=6.09
2024-07-09 12:24:14,392 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=26.2 pTM=0.257 ipTM=0.288 tol=13.2
2024-07-09 12:24:58,395 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=27.2 pTM=0.271 ipTM=0.35 tol=14.5
2024-07-09 12:25:42,374 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=25.8 pTM=0.248 ipTM=0.261 tol=16
2024-07-09 12:26:26,347 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=25.9 pTM=0.247 ipTM=0.273 tol=13
2024-07-09 12:27:10,343 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=26.1 pTM=0.244 ipTM=0.258 tol=17.9
2024-07-09 12:27:54,302 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=26.5 pTM=0.256 ipTM=0.296 tol=11.6
2024-07-09 12:28:38,320 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=26.3 pTM=0.252 ipTM=0.277 tol=12.4
2024-07-09 12:29:22,314 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=26.5 pTM=0.255 ipTM=0.29 tol=11.3
2024-07-09 12:30:06,353 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=26.1 pTM=0.237 ipTM=0.229 tol=9.6
2024-07-09 12:30:50,296 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=28 pTM=0.278 ipTM=0.344 tol=9.96
2024-07-09 12:31:34,197 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=26.3 pTM=0.261 ipTM=0.294 tol=8.55
2024-07-09 12:32:18,228 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=25.8 pTM=0.232 ipTM=0.218 tol=14.6
2024-07-09 12:33:02,189 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=27.2 pTM=0.265 ipTM=0.311 tol=16.3
2024-07-09 12:33:46,138 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=25.8 pTM=0.25 ipTM=0.266 tol=12
2024-07-09 12:34:30,108 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=25.6 pTM=0.235 ipTM=0.233 tol=12.1
2024-07-09 12:35:14,016 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=26.6 pTM=0.266 ipTM=0.31 tol=16.7
2024-07-09 12:35:57,919 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=24.2 pTM=0.25 ipTM=0.269 tol=30
2024-07-09 12:36:41,863 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=25.4 pTM=0.247 ipTM=0.275 tol=27.7
2024-07-09 12:37:25,808 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=26 pTM=0.251 ipTM=0.284 tol=20.8
2024-07-09 12:38:09,698 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=25.6 pTM=0.238 ipTM=0.225 tol=15.1
2024-07-09 12:38:53,671 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=25.2 pTM=0.24 ipTM=0.243 tol=20.5
2024-07-09 12:39:37,610 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=26.4 pTM=0.261 ipTM=0.311 tol=19.5
2024-07-09 12:40:21,532 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=26.4 pTM=0.264 ipTM=0.31 tol=13.3
2024-07-09 12:41:05,406 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=25.9 pTM=0.258 ipTM=0.296 tol=13.3
2024-07-09 12:41:05,407 alphafold2_multimer_v3_model_3_seed_000 took 1362.4s (30 recycles)
2024-07-09 12:41:50,067 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=25.6 pTM=0.257 ipTM=0.327
2024-07-09 12:42:33,879 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=24.9 pTM=0.246 ipTM=0.25 tol=18.8
2024-07-09 12:43:17,676 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=25.5 pTM=0.255 ipTM=0.287 tol=16
2024-07-09 12:44:01,514 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=24.7 pTM=0.243 ipTM=0.258 tol=14.8
2024-07-09 12:44:45,317 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=26.2 pTM=0.257 ipTM=0.296 tol=16.3
2024-07-09 12:45:29,171 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=25.3 pTM=0.242 ipTM=0.26 tol=14.4
2024-07-09 12:46:13,108 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=24.6 pTM=0.238 ipTM=0.236 tol=17.1
2024-07-09 12:46:57,007 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=25.5 pTM=0.249 ipTM=0.272 tol=14.3
2024-07-09 12:47:40,860 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=25 pTM=0.246 ipTM=0.281 tol=15
2024-07-09 12:48:24,700 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=25.6 pTM=0.249 ipTM=0.272 tol=13.6
2024-07-09 12:49:08,599 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=25.2 pTM=0.242 ipTM=0.256 tol=15.5
2024-07-09 12:49:52,404 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=26.1 pTM=0.254 ipTM=0.287 tol=14.1
2024-07-09 12:50:36,273 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=24.8 pTM=0.235 ipTM=0.232 tol=13.8
2024-07-09 12:51:20,096 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=25.6 pTM=0.253 ipTM=0.285 tol=13.8
2024-07-09 12:52:03,985 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=25.2 pTM=0.246 ipTM=0.246 tol=13.1
2024-07-09 12:52:47,794 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=26 pTM=0.259 ipTM=0.305 tol=14.5
2024-07-09 12:53:31,626 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=25.3 pTM=0.248 ipTM=0.262 tol=12.2
2024-07-09 12:54:15,509 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=24.7 pTM=0.239 ipTM=0.246 tol=13.2
2024-07-09 12:54:59,332 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=25.9 pTM=0.254 ipTM=0.286 tol=11.5
2024-07-09 12:55:43,184 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=24.9 pTM=0.235 ipTM=0.233 tol=8.72
2024-07-09 12:56:27,010 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=25.1 pTM=0.248 ipTM=0.274 tol=15.4
2024-07-09 12:57:10,889 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=25.3 pTM=0.244 ipTM=0.257 tol=12.3
2024-07-09 12:57:54,698 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=26 pTM=0.271 ipTM=0.364 tol=9.94
2024-07-09 12:58:38,552 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=25 pTM=0.245 ipTM=0.264 tol=16.2
2024-07-09 12:59:22,382 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=25.7 pTM=0.257 ipTM=0.301 tol=8.14
2024-07-09 13:00:06,217 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=25.2 pTM=0.255 ipTM=0.288 tol=6.87
2024-07-09 13:00:50,046 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=24.7 pTM=0.247 ipTM=0.272 tol=11.9
2024-07-09 13:01:33,911 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=24.7 pTM=0.24 ipTM=0.242 tol=10.5
2024-07-09 13:02:17,799 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=25.1 pTM=0.25 ipTM=0.281 tol=16
2024-07-09 13:03:01,704 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=25 pTM=0.248 ipTM=0.246 tol=15.7
2024-07-09 13:03:45,541 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=25.3 pTM=0.257 ipTM=0.295 tol=8.87
2024-07-09 13:03:45,543 alphafold2_multimer_v3_model_4_seed_000 took 1359.1s (30 recycles)
2024-07-09 13:04:30,351 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=25.9 pTM=0.252 ipTM=0.289
2024-07-09 13:05:14,241 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=26.4 pTM=0.245 ipTM=0.295 tol=19.7
2024-07-09 13:05:58,142 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=25.9 pTM=0.245 ipTM=0.272 tol=18.9
2024-07-09 13:06:42,126 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=26.4 pTM=0.246 ipTM=0.284 tol=17.3
2024-07-09 13:07:26,084 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=26.6 pTM=0.25 ipTM=0.282 tol=15.1
2024-07-09 13:08:10,066 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=26.6 pTM=0.248 ipTM=0.29 tol=17
2024-07-09 13:08:54,041 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=26.5 pTM=0.25 ipTM=0.285 tol=15.9
2024-07-09 13:09:37,982 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=26.8 pTM=0.249 ipTM=0.289 tol=16.2
2024-07-09 13:10:21,943 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=26.3 pTM=0.249 ipTM=0.281 tol=10.6
2024-07-09 13:11:05,869 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=26.5 pTM=0.249 ipTM=0.289 tol=9.53
2024-07-09 13:11:49,757 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=26.2 pTM=0.248 ipTM=0.282 tol=14.2
2024-07-09 13:12:33,632 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=26.2 pTM=0.248 ipTM=0.296 tol=13.8
2024-07-09 13:13:17,498 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=26.5 pTM=0.251 ipTM=0.297 tol=18.2
2024-07-09 13:14:01,402 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=25.9 pTM=0.245 ipTM=0.283 tol=13.1
2024-07-09 13:14:45,320 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=26.2 pTM=0.251 ipTM=0.288 tol=11.1
2024-07-09 13:15:29,212 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=25.8 pTM=0.245 ipTM=0.279 tol=11.8
2024-07-09 13:16:13,107 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=26 pTM=0.252 ipTM=0.298 tol=14.5
2024-07-09 13:16:56,964 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=25.9 pTM=0.246 ipTM=0.286 tol=12.1
2024-07-09 13:17:40,871 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=26.5 pTM=0.253 ipTM=0.302 tol=14.3
2024-07-09 13:18:24,759 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=25.5 pTM=0.241 ipTM=0.276 tol=13
2024-07-09 13:19:08,659 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=26.2 pTM=0.251 ipTM=0.304 tol=9.05
2024-07-09 13:19:52,520 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=25.4 pTM=0.24 ipTM=0.272 tol=14.3
2024-07-09 13:20:36,426 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=26.2 pTM=0.246 ipTM=0.3 tol=15.2
2024-07-09 13:21:20,338 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=26 pTM=0.243 ipTM=0.283 tol=16.8
2024-07-09 13:22:04,288 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=26.3 pTM=0.252 ipTM=0.304 tol=11.3
2024-07-09 13:22:48,168 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=26 pTM=0.244 ipTM=0.285 tol=12.8
2024-07-09 13:23:32,030 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=26.3 pTM=0.251 ipTM=0.304 tol=13.3
2024-07-09 13:24:15,933 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=25.8 pTM=0.241 ipTM=0.281 tol=10.3
2024-07-09 13:24:59,862 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=26.1 pTM=0.248 ipTM=0.302 tol=11.2
2024-07-09 13:25:43,736 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=25.9 pTM=0.244 ipTM=0.282 tol=8.23
2024-07-09 13:26:27,647 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=26.1 pTM=0.252 ipTM=0.305 tol=6.65
2024-07-09 13:26:27,648 alphafold2_multimer_v3_model_5_seed_000 took 1361.1s (30 recycles)
2024-07-09 13:26:28,654 reranking models by 'multimer' metric
2024-07-09 13:26:32,443 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 13:29:01,287 Relaxation took 152.6s
2024-07-09 13:29:01,288 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=26.1 pTM=0.252 ipTM=0.305
2024-07-09 13:31:13,754 Relaxation took 132.5s
2024-07-09 13:31:13,754 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=25.9 pTM=0.258 ipTM=0.296
2024-07-09 13:33:35,585 Relaxation took 141.8s
2024-07-09 13:33:35,585 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=25.3 pTM=0.257 ipTM=0.295
2024-07-09 13:35:16,937 Relaxation took 101.4s
2024-07-09 13:35:16,937 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=24.4 pTM=0.224 ipTM=0.214
2024-07-09 13:38:39,447 Relaxation took 202.5s
2024-07-09 13:38:39,447 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=25.7 pTM=0.209 ipTM=0.159
2024-07-09 13:38:41,912 Done