2024-07-09 14:08:43,649 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-09 14:08:43,974 Running on GPU 2024-07-09 14:08:48,094 Found 6 citations for tools or databases 2024-07-09 14:08:48,094 Query 1/1: CX024_MMAC (length 376) 2024-07-09 14:08:48,561 Sleeping for 8s. Reason: PENDING 2024-07-09 14:08:57,011 Sleeping for 9s. Reason: RUNNING 2024-07-09 14:09:06,441 Sleeping for 8s. Reason: RUNNING 2024-07-09 14:09:14,900 Sleeping for 9s. Reason: RUNNING 2024-07-09 14:09:24,322 Sleeping for 5s. Reason: RUNNING 2024-07-09 14:09:29,741 Sleeping for 8s. Reason: RUNNING 2024-07-09 14:09:39,958 Sleeping for 6s. Reason: PENDING 2024-07-09 14:09:46,373 Sleeping for 6s. Reason: RUNNING 2024-07-09 14:09:53,715 Setting max_seq=508, max_extra_seq=610 2024-07-09 14:11:54,998 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.5 pTM=0.666 ipTM=0.274 2024-07-09 14:11:58,406 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.3 pTM=0.671 ipTM=0.295 tol=4.8 2024-07-09 14:12:01,814 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.7 pTM=0.671 ipTM=0.298 tol=2.29 2024-07-09 14:12:05,224 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.3 pTM=0.671 ipTM=0.294 tol=1.61 2024-07-09 14:12:08,635 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.4 pTM=0.672 ipTM=0.299 tol=4.4 2024-07-09 14:12:12,043 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.5 pTM=0.672 ipTM=0.3 tol=2.1 2024-07-09 14:12:15,446 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.8 pTM=0.672 ipTM=0.364 tol=2.51 2024-07-09 14:12:18,845 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.1 pTM=0.671 ipTM=0.464 tol=2.04 2024-07-09 14:12:22,249 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.8 pTM=0.673 ipTM=0.581 tol=1.76 2024-07-09 14:12:25,653 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.7 pTM=0.674 ipTM=0.602 tol=2.54 2024-07-09 14:12:29,058 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.8 pTM=0.673 ipTM=0.611 tol=2.75 2024-07-09 14:12:32,463 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.9 pTM=0.674 ipTM=0.625 tol=1.42 2024-07-09 14:12:35,870 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.8 pTM=0.674 ipTM=0.6 tol=1.24 2024-07-09 14:12:39,274 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65 pTM=0.673 ipTM=0.624 tol=3.09 2024-07-09 14:12:42,679 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.8 pTM=0.673 ipTM=0.625 tol=1.85 2024-07-09 14:12:46,084 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.9 pTM=0.673 ipTM=0.622 tol=1.69 2024-07-09 14:12:49,490 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.2 pTM=0.674 ipTM=0.642 tol=2.32 2024-07-09 14:12:52,896 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.1 pTM=0.674 ipTM=0.613 tol=0.819 2024-07-09 14:12:56,303 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.9 pTM=0.673 ipTM=0.633 tol=1.32 2024-07-09 14:12:59,707 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.1 pTM=0.673 ipTM=0.644 tol=2.96 2024-07-09 14:13:03,115 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.2 pTM=0.674 ipTM=0.637 tol=1.84 2024-07-09 14:13:06,521 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.1 pTM=0.673 ipTM=0.651 tol=1.41 2024-07-09 14:13:09,929 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.1 pTM=0.674 ipTM=0.64 tol=0.972 2024-07-09 14:13:13,335 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.2 pTM=0.673 ipTM=0.636 tol=0.911 2024-07-09 14:13:16,739 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.1 pTM=0.674 ipTM=0.648 tol=2.29 2024-07-09 14:13:20,142 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.7 pTM=0.673 ipTM=0.609 tol=3.77 2024-07-09 14:13:23,547 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65 pTM=0.674 ipTM=0.633 tol=4.04 2024-07-09 14:13:26,953 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.2 pTM=0.675 ipTM=0.646 tol=3.44 2024-07-09 14:13:30,358 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65 pTM=0.674 ipTM=0.607 tol=1.46 2024-07-09 14:13:33,765 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.8 pTM=0.675 ipTM=0.634 tol=1.15 2024-07-09 14:13:37,168 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.1 pTM=0.674 ipTM=0.652 tol=1.05 2024-07-09 14:13:37,169 alphafold2_multimer_v3_model_1_seed_000 took 218.4s (30 recycles) 2024-07-09 14:13:40,671 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=63.4 pTM=0.654 ipTM=0.225 2024-07-09 14:13:44,072 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.5 pTM=0.656 ipTM=0.231 tol=4.43 2024-07-09 14:13:47,469 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.4 pTM=0.657 ipTM=0.241 tol=3.47 2024-07-09 14:13:50,871 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.8 pTM=0.66 ipTM=0.246 tol=2.11 2024-07-09 14:13:54,267 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.6 pTM=0.664 ipTM=0.263 tol=1.61 2024-07-09 14:13:57,662 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.7 pTM=0.663 ipTM=0.26 tol=1.31 2024-07-09 14:14:01,056 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.5 pTM=0.663 ipTM=0.263 tol=1.72 2024-07-09 14:14:04,445 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.3 pTM=0.663 ipTM=0.263 tol=2.54 2024-07-09 14:14:07,838 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.6 pTM=0.664 ipTM=0.269 tol=2.39 2024-07-09 14:14:11,231 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.5 pTM=0.664 ipTM=0.27 tol=0.712 2024-07-09 14:14:14,627 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.6 pTM=0.665 ipTM=0.271 tol=1.16 2024-07-09 14:14:18,023 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.6 pTM=0.664 ipTM=0.267 tol=1.72 2024-07-09 14:14:21,418 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.7 pTM=0.664 ipTM=0.269 tol=2.14 2024-07-09 14:14:24,813 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.7 pTM=0.664 ipTM=0.268 tol=0.785 2024-07-09 14:14:28,207 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.6 pTM=0.665 ipTM=0.273 tol=1.06 2024-07-09 14:14:31,604 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.6 pTM=0.666 ipTM=0.272 tol=1.04 2024-07-09 14:14:34,999 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.6 pTM=0.664 ipTM=0.268 tol=0.818 2024-07-09 14:14:38,395 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.5 pTM=0.665 ipTM=0.271 tol=0.924 2024-07-09 14:14:41,792 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.7 pTM=0.664 ipTM=0.266 tol=0.622 2024-07-09 14:14:45,186 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.6 pTM=0.663 ipTM=0.267 tol=0.771 2024-07-09 14:14:48,580 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.7 pTM=0.663 ipTM=0.267 tol=0.625 2024-07-09 14:14:51,976 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.5 pTM=0.665 ipTM=0.273 tol=0.911 2024-07-09 14:14:55,373 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.8 pTM=0.663 ipTM=0.264 tol=0.945 2024-07-09 14:14:58,766 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.6 pTM=0.663 ipTM=0.266 tol=1.82 2024-07-09 14:15:02,162 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.8 pTM=0.664 ipTM=0.28 tol=1.25 2024-07-09 14:15:05,549 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.6 pTM=0.662 ipTM=0.308 tol=1.55 2024-07-09 14:15:08,944 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.1 pTM=0.666 ipTM=0.391 tol=1.71 2024-07-09 14:15:12,339 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.6 pTM=0.667 ipTM=0.446 tol=1.14 2024-07-09 14:15:15,737 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.6 pTM=0.665 ipTM=0.396 tol=1.77 2024-07-09 14:15:19,132 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.6 pTM=0.666 ipTM=0.414 tol=2.24 2024-07-09 14:15:22,528 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.4 pTM=0.665 ipTM=0.346 tol=0.758 2024-07-09 14:15:22,528 alphafold2_multimer_v3_model_2_seed_000 took 105.3s (30 recycles) 2024-07-09 14:15:26,043 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.8 pTM=0.669 ipTM=0.255 2024-07-09 14:15:29,446 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.6 pTM=0.673 ipTM=0.284 tol=6.23 2024-07-09 14:15:32,845 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.4 pTM=0.672 ipTM=0.29 tol=3.49 2024-07-09 14:15:36,244 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.4 pTM=0.674 ipTM=0.308 tol=2.7 2024-07-09 14:15:39,634 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.1 pTM=0.674 ipTM=0.31 tol=1.92 2024-07-09 14:15:43,019 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.1 pTM=0.676 ipTM=0.326 tol=1.24 2024-07-09 14:15:46,403 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.9 pTM=0.669 ipTM=0.296 tol=1.82 2024-07-09 14:15:49,784 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.4 pTM=0.671 ipTM=0.309 tol=1.79 2024-07-09 14:15:53,165 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.2 pTM=0.67 ipTM=0.305 tol=0.976 2024-07-09 14:15:56,546 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.6 pTM=0.674 ipTM=0.32 tol=0.876 2024-07-09 14:15:59,929 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.4 pTM=0.67 ipTM=0.304 tol=1.08 2024-07-09 14:16:03,309 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.6 pTM=0.672 ipTM=0.311 tol=1.79 2024-07-09 14:16:06,693 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.5 pTM=0.672 ipTM=0.314 tol=1.55 2024-07-09 14:16:10,072 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.5 pTM=0.671 ipTM=0.314 tol=1.59 2024-07-09 14:16:13,457 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.6 pTM=0.674 ipTM=0.322 tol=1.61 2024-07-09 14:16:16,844 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.5 pTM=0.675 ipTM=0.323 tol=1.54 2024-07-09 14:16:20,227 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.4 pTM=0.673 ipTM=0.313 tol=1.01 2024-07-09 14:16:23,612 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.4 pTM=0.675 ipTM=0.324 tol=1.33 2024-07-09 14:16:26,994 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.4 pTM=0.674 ipTM=0.322 tol=0.825 2024-07-09 14:16:30,380 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.6 pTM=0.673 ipTM=0.315 tol=2.01 2024-07-09 14:16:33,762 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.2 pTM=0.674 ipTM=0.318 tol=2.18 2024-07-09 14:16:37,149 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.5 pTM=0.675 ipTM=0.323 tol=1.07 2024-07-09 14:16:40,540 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.4 pTM=0.673 ipTM=0.315 tol=0.66 2024-07-09 14:16:43,927 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.9 pTM=0.673 ipTM=0.314 tol=0.871 2024-07-09 14:16:47,306 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.4 pTM=0.673 ipTM=0.317 tol=0.955 2024-07-09 14:16:50,689 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.7 pTM=0.673 ipTM=0.321 tol=2.12 2024-07-09 14:16:54,073 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.6 pTM=0.673 ipTM=0.316 tol=0.864 2024-07-09 14:16:57,456 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.6 pTM=0.672 ipTM=0.313 tol=0.678 2024-07-09 14:17:00,840 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.7 pTM=0.673 ipTM=0.317 tol=1.24 2024-07-09 14:17:04,220 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.4 pTM=0.672 ipTM=0.321 tol=1.24 2024-07-09 14:17:07,603 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.6 pTM=0.674 ipTM=0.32 tol=1.16 2024-07-09 14:17:07,603 alphafold2_multimer_v3_model_3_seed_000 took 105.0s (30 recycles) 2024-07-09 14:17:11,114 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.1 pTM=0.672 ipTM=0.289 2024-07-09 14:17:14,518 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.4 pTM=0.663 ipTM=0.254 tol=5.95 2024-07-09 14:17:17,924 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.1 pTM=0.661 ipTM=0.248 tol=4.55 2024-07-09 14:17:21,334 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.3 pTM=0.656 ipTM=0.228 tol=4.68 2024-07-09 14:17:24,742 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.6 pTM=0.66 ipTM=0.247 tol=3.7 2024-07-09 14:17:28,149 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.5 pTM=0.657 ipTM=0.237 tol=2.08 2024-07-09 14:17:31,555 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.6 pTM=0.659 ipTM=0.246 tol=1.45 2024-07-09 14:17:34,965 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.6 pTM=0.658 ipTM=0.26 tol=1.83 2024-07-09 14:17:38,370 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.8 pTM=0.659 ipTM=0.247 tol=1.75 2024-07-09 14:17:41,777 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.8 pTM=0.66 ipTM=0.27 tol=1.55 2024-07-09 14:17:45,186 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.6 pTM=0.66 ipTM=0.251 tol=2.65 2024-07-09 14:17:48,593 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.8 pTM=0.661 ipTM=0.28 tol=1.46 2024-07-09 14:17:51,998 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.7 pTM=0.66 ipTM=0.253 tol=1.66 2024-07-09 14:17:55,403 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.8 pTM=0.662 ipTM=0.287 tol=1.58 2024-07-09 14:17:58,808 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.6 pTM=0.661 ipTM=0.255 tol=1.6 2024-07-09 14:18:02,213 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.8 pTM=0.664 ipTM=0.279 tol=1.65 2024-07-09 14:18:05,620 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.6 pTM=0.659 ipTM=0.247 tol=4.26 2024-07-09 14:18:09,027 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.9 pTM=0.665 ipTM=0.284 tol=5.19 2024-07-09 14:18:12,434 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.5 pTM=0.662 ipTM=0.26 tol=2.12 2024-07-09 14:18:15,838 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.9 pTM=0.664 ipTM=0.269 tol=0.815 2024-07-09 14:18:19,242 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.6 pTM=0.662 ipTM=0.262 tol=1.37 2024-07-09 14:18:22,647 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.7 pTM=0.665 ipTM=0.276 tol=2.33 2024-07-09 14:18:26,055 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.9 pTM=0.663 ipTM=0.26 tol=1.59 2024-07-09 14:18:29,461 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.9 pTM=0.663 ipTM=0.283 tol=2.83 2024-07-09 14:18:32,865 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.8 pTM=0.662 ipTM=0.263 tol=2.83 2024-07-09 14:18:36,271 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66 pTM=0.664 ipTM=0.276 tol=1.18 2024-07-09 14:18:39,675 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.9 pTM=0.662 ipTM=0.263 tol=1.5 2024-07-09 14:18:43,078 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.1 pTM=0.665 ipTM=0.292 tol=1.49 2024-07-09 14:18:46,483 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.8 pTM=0.661 ipTM=0.258 tol=2.49 2024-07-09 14:18:49,887 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.6 pTM=0.665 ipTM=0.273 tol=0.842 2024-07-09 14:18:53,291 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.7 pTM=0.662 ipTM=0.26 tol=1.32 2024-07-09 14:18:53,292 alphafold2_multimer_v3_model_4_seed_000 took 105.6s (30 recycles) 2024-07-09 14:18:56,803 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.3 pTM=0.669 ipTM=0.26 2024-07-09 14:19:00,210 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.2 pTM=0.668 ipTM=0.261 tol=5.45 2024-07-09 14:19:03,617 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64 pTM=0.662 ipTM=0.243 tol=3.33 2024-07-09 14:19:07,020 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.1 pTM=0.662 ipTM=0.248 tol=3.34 2024-07-09 14:19:10,428 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=64.4 pTM=0.661 ipTM=0.24 tol=2.62 2024-07-09 14:19:13,835 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=64.2 pTM=0.663 ipTM=0.253 tol=3.96 2024-07-09 14:19:17,241 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.4 pTM=0.66 ipTM=0.241 tol=3.98 2024-07-09 14:19:20,645 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.3 pTM=0.659 ipTM=0.239 tol=4.31 2024-07-09 14:19:24,051 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.3 pTM=0.66 ipTM=0.245 tol=2.29 2024-07-09 14:19:27,457 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.3 pTM=0.662 ipTM=0.25 tol=2.75 2024-07-09 14:19:30,863 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.2 pTM=0.662 ipTM=0.252 tol=2.82 2024-07-09 14:19:34,271 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.2 pTM=0.663 ipTM=0.255 tol=1.8 2024-07-09 14:19:37,680 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.8 pTM=0.661 ipTM=0.244 tol=2 2024-07-09 14:19:41,087 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.5 pTM=0.662 ipTM=0.254 tol=2.48 2024-07-09 14:19:44,494 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.5 pTM=0.663 ipTM=0.257 tol=5.24 2024-07-09 14:19:47,901 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.3 pTM=0.663 ipTM=0.259 tol=1.17 2024-07-09 14:19:51,305 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.6 pTM=0.659 ipTM=0.239 tol=3.1 2024-07-09 14:19:54,712 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.6 pTM=0.662 ipTM=0.253 tol=2 2024-07-09 14:19:58,119 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.4 pTM=0.662 ipTM=0.252 tol=1.59 2024-07-09 14:20:01,525 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.8 pTM=0.659 ipTM=0.238 tol=3.54 2024-07-09 14:20:04,930 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.7 pTM=0.659 ipTM=0.238 tol=1.54 2024-07-09 14:20:08,333 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.6 pTM=0.659 ipTM=0.242 tol=2.79 2024-07-09 14:20:11,747 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.8 pTM=0.659 ipTM=0.236 tol=3.74 2024-07-09 14:20:15,150 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.8 pTM=0.658 ipTM=0.235 tol=1.96 2024-07-09 14:20:18,561 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.6 pTM=0.66 ipTM=0.248 tol=2.12 2024-07-09 14:20:21,964 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.6 pTM=0.659 ipTM=0.244 tol=2.16 2024-07-09 14:20:25,372 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.8 pTM=0.658 ipTM=0.237 tol=2.78 2024-07-09 14:20:28,779 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65 pTM=0.658 ipTM=0.234 tol=4 2024-07-09 14:20:32,186 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.8 pTM=0.658 ipTM=0.235 tol=1.86 2024-07-09 14:20:35,591 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.4 pTM=0.659 ipTM=0.249 tol=1.65 2024-07-09 14:20:38,998 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.5 pTM=0.66 ipTM=0.248 tol=1.32 2024-07-09 14:20:38,998 alphafold2_multimer_v3_model_5_seed_000 took 105.6s (30 recycles) 2024-07-09 14:20:39,102 reranking models by 'multimer' metric 2024-07-09 14:20:39,780 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-09 14:22:17,646 Relaxation took 98.5s 2024-07-09 14:22:17,646 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.1 pTM=0.674 ipTM=0.652 2024-07-09 14:22:38,976 Relaxation took 21.3s 2024-07-09 14:22:38,976 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.4 pTM=0.665 ipTM=0.346 2024-07-09 14:22:59,528 Relaxation took 20.6s 2024-07-09 14:22:59,528 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.6 pTM=0.674 ipTM=0.32 2024-07-09 14:23:18,280 Relaxation took 18.8s 2024-07-09 14:23:18,280 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.7 pTM=0.662 ipTM=0.26 2024-07-09 14:23:40,717 Relaxation took 22.4s 2024-07-09 14:23:40,717 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.5 pTM=0.66 ipTM=0.248 2024-07-09 14:23:41,637 Done