2024-07-09 14:22:50,586 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 14:22:50,922 Running on GPU
2024-07-09 14:22:54,927 Found 6 citations for tools or databases
2024-07-09 14:22:54,928 Query 1/1: CYTC_LRAT2 (length 456)
2024-07-09 14:22:55,396 Sleeping for 8s. Reason: PENDING
2024-07-09 14:23:03,821 Sleeping for 6s. Reason: RUNNING
2024-07-09 14:23:10,763 Sleeping for 9s. Reason: RUNNING
2024-07-09 14:23:20,704 Sleeping for 7s. Reason: RUNNING
2024-07-09 14:23:28,150 Sleeping for 5s. Reason: RUNNING
2024-07-09 14:23:33,569 Sleeping for 9s. Reason: RUNNING
2024-07-09 14:23:42,997 Sleeping for 8s. Reason: RUNNING
2024-07-09 14:23:51,588 Sleeping for 6s. Reason: RUNNING
2024-07-09 14:24:08,782 Sleeping for 7s. Reason: PENDING
2024-07-09 14:24:16,203 Sleeping for 5s. Reason: RUNNING
2024-07-09 14:24:21,632 Sleeping for 9s. Reason: RUNNING
2024-07-09 14:24:33,158 Setting max_seq=508, max_extra_seq=2048
2024-07-09 14:26:33,712 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.5 pTM=0.506 ipTM=0.226
2024-07-09 14:26:38,335 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.8 pTM=0.506 ipTM=0.182 tol=5.81
2024-07-09 14:26:42,961 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.8 pTM=0.499 ipTM=0.152 tol=5.64
2024-07-09 14:26:47,584 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.2 pTM=0.496 ipTM=0.143 tol=3.23
2024-07-09 14:26:52,211 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67 pTM=0.492 ipTM=0.131 tol=6.05
2024-07-09 14:26:56,838 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.6 pTM=0.492 ipTM=0.137 tol=4.37
2024-07-09 14:27:01,473 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.2 pTM=0.485 ipTM=0.115 tol=3.17
2024-07-09 14:27:06,104 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.1 pTM=0.491 ipTM=0.14 tol=1.94
2024-07-09 14:27:10,740 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.4 pTM=0.487 ipTM=0.122 tol=2.27
2024-07-09 14:27:15,371 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.2 pTM=0.491 ipTM=0.139 tol=2.27
2024-07-09 14:27:20,006 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.4 pTM=0.488 ipTM=0.127 tol=2.5
2024-07-09 14:27:24,636 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.1 pTM=0.491 ipTM=0.138 tol=1.8
2024-07-09 14:27:29,271 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.9 pTM=0.488 ipTM=0.123 tol=1.85
2024-07-09 14:27:33,900 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.9 pTM=0.492 ipTM=0.141 tol=1.27
2024-07-09 14:27:38,531 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.9 pTM=0.488 ipTM=0.124 tol=1.7
2024-07-09 14:27:43,169 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.7 pTM=0.491 ipTM=0.136 tol=1.55
2024-07-09 14:27:47,810 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.4 pTM=0.489 ipTM=0.133 tol=1.05
2024-07-09 14:27:52,441 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68 pTM=0.501 ipTM=0.166 tol=2.33
2024-07-09 14:27:57,077 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.8 pTM=0.489 ipTM=0.127 tol=2.61
2024-07-09 14:28:01,712 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.8 pTM=0.494 ipTM=0.144 tol=1.75
2024-07-09 14:28:06,346 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.4 pTM=0.491 ipTM=0.135 tol=1.85
2024-07-09 14:28:10,980 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.5 pTM=0.494 ipTM=0.142 tol=1.18
2024-07-09 14:28:15,610 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.4 pTM=0.49 ipTM=0.13 tol=1.08
2024-07-09 14:28:20,244 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.8 pTM=0.496 ipTM=0.149 tol=1.27
2024-07-09 14:28:24,876 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.4 pTM=0.492 ipTM=0.137 tol=1.41
2024-07-09 14:28:29,512 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68 pTM=0.498 ipTM=0.152 tol=1.47
2024-07-09 14:28:34,141 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.6 pTM=0.492 ipTM=0.137 tol=1.1
2024-07-09 14:28:38,769 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.8 pTM=0.501 ipTM=0.164 tol=1.02
2024-07-09 14:28:43,404 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.8 pTM=0.494 ipTM=0.141 tol=1.65
2024-07-09 14:28:48,033 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.8 pTM=0.5 ipTM=0.162 tol=1.14
2024-07-09 14:28:52,666 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.7 pTM=0.492 ipTM=0.136 tol=1.17
2024-07-09 14:28:52,667 alphafold2_multimer_v3_model_1_seed_000 took 254.4s (30 recycles)
2024-07-09 14:28:57,407 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.8 pTM=0.459 ipTM=0.169
2024-07-09 14:29:02,032 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65 pTM=0.497 ipTM=0.138 tol=11.5
2024-07-09 14:29:06,673 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.2 pTM=0.504 ipTM=0.175 tol=5.78
2024-07-09 14:29:11,313 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.5 pTM=0.484 ipTM=0.114 tol=5.68
2024-07-09 14:29:15,955 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.5 pTM=0.491 ipTM=0.135 tol=4.97
2024-07-09 14:29:20,600 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.7 pTM=0.488 ipTM=0.126 tol=3.28
2024-07-09 14:29:25,249 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.6 pTM=0.49 ipTM=0.137 tol=4.77
2024-07-09 14:29:29,892 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.5 pTM=0.489 ipTM=0.13 tol=3.39
2024-07-09 14:29:34,538 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.5 pTM=0.494 ipTM=0.145 tol=3.28
2024-07-09 14:29:39,181 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.4 pTM=0.489 ipTM=0.128 tol=3.46
2024-07-09 14:29:43,828 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.7 pTM=0.492 ipTM=0.14 tol=3.51
2024-07-09 14:29:48,471 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.8 pTM=0.493 ipTM=0.146 tol=5.68
2024-07-09 14:29:53,117 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.8 pTM=0.494 ipTM=0.143 tol=4.78
2024-07-09 14:29:57,756 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.7 pTM=0.493 ipTM=0.139 tol=1.88
2024-07-09 14:30:02,399 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.6 pTM=0.493 ipTM=0.138 tol=1.68
2024-07-09 14:30:07,042 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.7 pTM=0.491 ipTM=0.139 tol=1.85
2024-07-09 14:30:11,684 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.3 pTM=0.492 ipTM=0.135 tol=2.82
2024-07-09 14:30:16,326 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.6 pTM=0.489 ipTM=0.126 tol=3.25
2024-07-09 14:30:20,976 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.5 pTM=0.491 ipTM=0.123 tol=2.44
2024-07-09 14:30:25,627 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.8 pTM=0.492 ipTM=0.136 tol=2.6
2024-07-09 14:30:30,271 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.8 pTM=0.496 ipTM=0.144 tol=2.58
2024-07-09 14:30:34,912 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.8 pTM=0.494 ipTM=0.142 tol=1.71
2024-07-09 14:30:39,556 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.6 pTM=0.49 ipTM=0.129 tol=2.04
2024-07-09 14:30:44,196 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.9 pTM=0.49 ipTM=0.132 tol=1.82
2024-07-09 14:30:48,842 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.7 pTM=0.489 ipTM=0.13 tol=1.82
2024-07-09 14:30:53,491 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.9 pTM=0.488 ipTM=0.124 tol=2.04
2024-07-09 14:30:58,140 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68 pTM=0.493 ipTM=0.142 tol=2.12
2024-07-09 14:31:02,783 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.9 pTM=0.489 ipTM=0.123 tol=4.34
2024-07-09 14:31:07,424 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68 pTM=0.496 ipTM=0.149 tol=3.03
2024-07-09 14:31:12,064 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.9 pTM=0.494 ipTM=0.143 tol=1.92
2024-07-09 14:31:16,708 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.1 pTM=0.496 ipTM=0.149 tol=2.14
2024-07-09 14:31:16,708 alphafold2_multimer_v3_model_2_seed_000 took 143.9s (30 recycles)
2024-07-09 14:31:21,461 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59 pTM=0.413 ipTM=0.153
2024-07-09 14:31:26,112 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.3 pTM=0.5 ipTM=0.168 tol=14.2
2024-07-09 14:31:30,790 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.7 pTM=0.496 ipTM=0.112 tol=14.6
2024-07-09 14:31:35,465 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.9 pTM=0.498 ipTM=0.125 tol=9
2024-07-09 14:31:40,135 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.4 pTM=0.494 ipTM=0.121 tol=4.84
2024-07-09 14:31:44,813 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.4 pTM=0.495 ipTM=0.121 tol=3.09
2024-07-09 14:31:49,493 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.6 pTM=0.499 ipTM=0.132 tol=4.49
2024-07-09 14:31:54,168 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.2 pTM=0.5 ipTM=0.135 tol=3.39
2024-07-09 14:31:58,848 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.7 pTM=0.501 ipTM=0.14 tol=4.28
2024-07-09 14:32:03,524 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.6 pTM=0.501 ipTM=0.138 tol=3.67
2024-07-09 14:32:08,197 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.9 pTM=0.508 ipTM=0.156 tol=1.46
2024-07-09 14:32:12,864 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.8 pTM=0.506 ipTM=0.153 tol=1.48
2024-07-09 14:32:17,536 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.6 pTM=0.509 ipTM=0.156 tol=2.22
2024-07-09 14:32:22,204 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.8 pTM=0.509 ipTM=0.164 tol=1.69
2024-07-09 14:32:26,881 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.6 pTM=0.504 ipTM=0.147 tol=2.6
2024-07-09 14:32:31,553 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.6 pTM=0.508 ipTM=0.162 tol=2.47
2024-07-09 14:32:36,228 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.5 pTM=0.505 ipTM=0.152 tol=1.4
2024-07-09 14:32:40,895 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.4 pTM=0.507 ipTM=0.156 tol=1.83
2024-07-09 14:32:45,572 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.6 pTM=0.507 ipTM=0.155 tol=1.42
2024-07-09 14:32:50,245 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.6 pTM=0.505 ipTM=0.154 tol=1.06
2024-07-09 14:32:54,925 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.8 pTM=0.504 ipTM=0.143 tol=1.35
2024-07-09 14:32:59,597 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68.5 pTM=0.506 ipTM=0.16 tol=2.48
2024-07-09 14:33:04,271 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.4 pTM=0.501 ipTM=0.141 tol=1.04
2024-07-09 14:33:08,944 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.4 pTM=0.504 ipTM=0.155 tol=1.24
2024-07-09 14:33:13,616 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68.4 pTM=0.504 ipTM=0.153 tol=1.01
2024-07-09 14:33:18,291 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.6 pTM=0.504 ipTM=0.151 tol=1.2
2024-07-09 14:33:22,968 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.4 pTM=0.501 ipTM=0.142 tol=1.04
2024-07-09 14:33:27,636 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.3 pTM=0.501 ipTM=0.149 tol=2.14
2024-07-09 14:33:32,310 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68.5 pTM=0.502 ipTM=0.143 tol=2.01
2024-07-09 14:33:36,981 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68.6 pTM=0.505 ipTM=0.157 tol=2.02
2024-07-09 14:33:41,657 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=68.8 pTM=0.5 ipTM=0.135 tol=1.54
2024-07-09 14:33:41,657 alphafold2_multimer_v3_model_3_seed_000 took 144.8s (30 recycles)
2024-07-09 14:33:46,429 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.6 pTM=0.535 ipTM=0.266
2024-07-09 14:33:51,086 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.8 pTM=0.511 ipTM=0.191 tol=14.5
2024-07-09 14:33:55,757 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.6 pTM=0.515 ipTM=0.187 tol=7.57
2024-07-09 14:34:00,418 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.1 pTM=0.516 ipTM=0.191 tol=4.45
2024-07-09 14:34:05,085 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.6 pTM=0.515 ipTM=0.195 tol=2
2024-07-09 14:34:09,753 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.4 pTM=0.521 ipTM=0.223 tol=2.28
2024-07-09 14:34:14,417 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.3 pTM=0.529 ipTM=0.261 tol=2.85
2024-07-09 14:34:19,071 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.9 pTM=0.58 ipTM=0.428 tol=2.23
2024-07-09 14:34:23,734 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69 pTM=0.513 ipTM=0.201 tol=2.1
2024-07-09 14:34:28,398 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.1 pTM=0.52 ipTM=0.225 tol=3.35
2024-07-09 14:34:33,058 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.1 pTM=0.519 ipTM=0.23 tol=2.85
2024-07-09 14:34:37,715 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.2 pTM=0.538 ipTM=0.295 tol=2.38
2024-07-09 14:34:42,378 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.6 pTM=0.531 ipTM=0.271 tol=3.34
2024-07-09 14:34:47,041 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.1 pTM=0.52 ipTM=0.23 tol=2.22
2024-07-09 14:34:51,709 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.6 pTM=0.524 ipTM=0.244 tol=1.39
2024-07-09 14:34:56,372 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.4 pTM=0.53 ipTM=0.265 tol=1.42
2024-07-09 14:35:01,041 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.6 pTM=0.519 ipTM=0.226 tol=0.893
2024-07-09 14:35:05,706 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.3 pTM=0.514 ipTM=0.21 tol=0.992
2024-07-09 14:35:10,375 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.4 pTM=0.513 ipTM=0.204 tol=1.29
2024-07-09 14:35:15,043 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.4 pTM=0.518 ipTM=0.223 tol=1.47
2024-07-09 14:35:19,713 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.4 pTM=0.515 ipTM=0.213 tol=1.78
2024-07-09 14:35:24,377 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.4 pTM=0.523 ipTM=0.238 tol=1.57
2024-07-09 14:35:29,046 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.4 pTM=0.513 ipTM=0.203 tol=2.31
2024-07-09 14:35:33,714 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.6 pTM=0.547 ipTM=0.317 tol=2.52
2024-07-09 14:35:38,378 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.5 pTM=0.525 ipTM=0.248 tol=1.38
2024-07-09 14:35:43,046 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.7 pTM=0.526 ipTM=0.246 tol=1.55
2024-07-09 14:35:47,714 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.3 pTM=0.516 ipTM=0.217 tol=1.43
2024-07-09 14:35:52,378 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.4 pTM=0.533 ipTM=0.267 tol=1.53
2024-07-09 14:35:57,042 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.3 pTM=0.522 ipTM=0.239 tol=1.2
2024-07-09 14:36:01,709 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.2 pTM=0.523 ipTM=0.244 tol=1.63
2024-07-09 14:36:06,376 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.6 pTM=0.513 ipTM=0.204 tol=1.59
2024-07-09 14:36:06,376 alphafold2_multimer_v3_model_4_seed_000 took 144.6s (30 recycles)
2024-07-09 14:36:11,137 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.3 pTM=0.479 ipTM=0.172
2024-07-09 14:36:15,798 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.9 pTM=0.492 ipTM=0.118 tol=4.73
2024-07-09 14:36:20,473 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.2 pTM=0.503 ipTM=0.148 tol=15.5
2024-07-09 14:36:25,147 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.1 pTM=0.491 ipTM=0.11 tol=5.18
2024-07-09 14:36:29,828 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.4 pTM=0.501 ipTM=0.135 tol=2.8
2024-07-09 14:36:34,507 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.5 pTM=0.492 ipTM=0.11 tol=2.44
2024-07-09 14:36:39,187 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.6 pTM=0.502 ipTM=0.135 tol=2.91
2024-07-09 14:36:43,863 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.2 pTM=0.494 ipTM=0.114 tol=3.29
2024-07-09 14:36:48,540 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.5 pTM=0.504 ipTM=0.138 tol=2.49
2024-07-09 14:36:53,211 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.2 pTM=0.495 ipTM=0.111 tol=2.68
2024-07-09 14:36:57,880 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.4 pTM=0.508 ipTM=0.146 tol=2.81
2024-07-09 14:37:02,547 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.9 pTM=0.498 ipTM=0.122 tol=2.79
2024-07-09 14:37:07,216 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.9 pTM=0.508 ipTM=0.144 tol=3.19
2024-07-09 14:37:11,880 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.1 pTM=0.498 ipTM=0.115 tol=3.59
2024-07-09 14:37:16,549 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.4 pTM=0.505 ipTM=0.134 tol=3.01
2024-07-09 14:37:21,218 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68 pTM=0.498 ipTM=0.118 tol=2.71
2024-07-09 14:37:25,889 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.2 pTM=0.512 ipTM=0.16 tol=3.28
2024-07-09 14:37:30,553 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.2 pTM=0.499 ipTM=0.116 tol=2.65
2024-07-09 14:37:35,224 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.2 pTM=0.511 ipTM=0.147 tol=2.72
2024-07-09 14:37:39,892 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.1 pTM=0.497 ipTM=0.114 tol=2.58
2024-07-09 14:37:44,566 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.3 pTM=0.505 ipTM=0.133 tol=1.79
2024-07-09 14:37:49,238 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.1 pTM=0.498 ipTM=0.117 tol=2.22
2024-07-09 14:37:53,905 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.9 pTM=0.51 ipTM=0.154 tol=2.49
2024-07-09 14:37:58,576 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.4 pTM=0.494 ipTM=0.107 tol=3.38
2024-07-09 14:38:03,245 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.1 pTM=0.504 ipTM=0.135 tol=3.36
2024-07-09 14:38:07,921 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.2 pTM=0.496 ipTM=0.116 tol=3.33
2024-07-09 14:38:12,592 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.4 pTM=0.51 ipTM=0.156 tol=2.9
2024-07-09 14:38:17,261 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.2 pTM=0.496 ipTM=0.112 tol=2.85
2024-07-09 14:38:21,930 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.1 pTM=0.503 ipTM=0.13 tol=2.87
2024-07-09 14:38:26,602 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.9 pTM=0.5 ipTM=0.125 tol=2
2024-07-09 14:38:31,274 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.4 pTM=0.509 ipTM=0.149 tol=2.31
2024-07-09 14:38:31,275 alphafold2_multimer_v3_model_5_seed_000 took 144.8s (30 recycles)
2024-07-09 14:38:31,419 reranking models by 'multimer' metric
2024-07-09 14:38:32,081 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 14:38:51,868 Relaxation took 20.4s
2024-07-09 14:38:51,869 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.6 pTM=0.513 ipTM=0.204
2024-07-09 14:39:04,563 Relaxation took 12.7s
2024-07-09 14:39:04,564 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.4 pTM=0.509 ipTM=0.149
2024-07-09 14:39:18,575 Relaxation took 14.0s
2024-07-09 14:39:18,575 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.1 pTM=0.496 ipTM=0.149
2024-07-09 14:39:32,030 Relaxation took 13.5s
2024-07-09 14:39:32,031 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=68.8 pTM=0.5 ipTM=0.135
2024-07-09 14:39:53,700 Relaxation took 21.7s
2024-07-09 14:39:53,700 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.7 pTM=0.492 ipTM=0.136
2024-07-09 14:39:54,672 Done