2024-07-09 14:28:24,712 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-09 14:28:25,032 Running on GPU 2024-07-09 14:28:28,784 Found 6 citations for tools or databases 2024-07-09 14:28:28,785 Query 1/1: DACT3_CATL3 (length 847) 2024-07-09 14:28:29,341 Sleeping for 5s. Reason: PENDING 2024-07-09 14:28:34,755 Sleeping for 7s. Reason: RUNNING 2024-07-09 14:28:42,194 Sleeping for 5s. Reason: RUNNING 2024-07-09 14:28:47,612 Sleeping for 8s. Reason: RUNNING 2024-07-09 14:28:56,035 Sleeping for 8s. Reason: RUNNING 2024-07-09 14:29:04,463 Sleeping for 10s. Reason: RUNNING 2024-07-09 14:29:14,882 Sleeping for 7s. Reason: RUNNING 2024-07-09 14:29:22,318 Sleeping for 8s. Reason: RUNNING 2024-07-09 14:29:33,264 Sleeping for 6s. Reason: PENDING 2024-07-09 14:29:39,909 Sleeping for 7s. Reason: RUNNING 2024-07-09 14:29:47,320 Sleeping for 6s. Reason: RUNNING 2024-07-09 14:29:55,074 Setting max_seq=508, max_extra_seq=1973 2024-07-09 14:32:56,142 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=23.5 pTM=0.197 ipTM=0.204 2024-07-09 14:33:10,743 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=23.3 pTM=0.186 ipTM=0.201 tol=14.1 2024-07-09 14:33:25,403 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=23.3 pTM=0.178 ipTM=0.198 tol=9.65 2024-07-09 14:33:40,120 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=23 pTM=0.179 ipTM=0.206 tol=6.61 2024-07-09 14:33:54,846 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=23.1 pTM=0.177 ipTM=0.199 tol=8.05 2024-07-09 14:34:09,608 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=23 pTM=0.174 ipTM=0.197 tol=9.14 2024-07-09 14:34:24,392 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=23.1 pTM=0.176 ipTM=0.198 tol=7.87 2024-07-09 14:34:39,186 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=23.1 pTM=0.173 ipTM=0.196 tol=4.18 2024-07-09 14:34:53,995 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=23.3 pTM=0.176 ipTM=0.2 tol=4.68 2024-07-09 14:35:08,816 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=23.3 pTM=0.177 ipTM=0.2 tol=4.29 2024-07-09 14:35:23,647 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=23.3 pTM=0.174 ipTM=0.199 tol=3.07 2024-07-09 14:35:38,488 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=23.4 pTM=0.173 ipTM=0.199 tol=2.61 2024-07-09 14:35:53,329 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=23.2 pTM=0.174 ipTM=0.2 tol=6.77 2024-07-09 14:36:08,175 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=23.3 pTM=0.174 ipTM=0.2 tol=6.96 2024-07-09 14:36:23,024 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=23.3 pTM=0.177 ipTM=0.202 tol=4.55 2024-07-09 14:36:37,874 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=23.5 pTM=0.176 ipTM=0.202 tol=4.04 2024-07-09 14:36:52,720 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=23.4 pTM=0.176 ipTM=0.201 tol=4.12 2024-07-09 14:37:07,571 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=23.4 pTM=0.176 ipTM=0.234 tol=2.83 2024-07-09 14:37:22,419 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=23.4 pTM=0.177 ipTM=0.203 tol=2.13 2024-07-09 14:37:37,266 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=23.7 pTM=0.176 ipTM=0.202 tol=2.15 2024-07-09 14:37:52,114 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=23.6 pTM=0.176 ipTM=0.255 tol=2.84 2024-07-09 14:38:06,962 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=23.5 pTM=0.176 ipTM=0.2 tol=2.06 2024-07-09 14:38:21,810 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=23.4 pTM=0.177 ipTM=0.205 tol=2.97 2024-07-09 14:38:36,659 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=23.7 pTM=0.178 ipTM=0.208 tol=7.47 2024-07-09 14:38:51,501 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=23.5 pTM=0.178 ipTM=0.205 tol=8.34 2024-07-09 14:39:06,342 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=23.5 pTM=0.175 ipTM=0.199 tol=2.9 2024-07-09 14:39:21,185 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=23.8 pTM=0.178 ipTM=0.205 tol=11.4 2024-07-09 14:39:36,027 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=23.4 pTM=0.179 ipTM=0.203 tol=9.68 2024-07-09 14:39:50,876 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=23.4 pTM=0.178 ipTM=0.208 tol=3.75 2024-07-09 14:40:05,730 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=23.3 pTM=0.178 ipTM=0.204 tol=3.2 2024-07-09 14:40:20,587 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=23.7 pTM=0.178 ipTM=0.205 tol=3.7 2024-07-09 14:40:20,588 alphafold2_multimer_v3_model_1_seed_000 took 620.4s (30 recycles) 2024-07-09 14:40:35,811 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=22.2 pTM=0.228 ipTM=0.205 2024-07-09 14:40:50,624 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=22.5 pTM=0.208 ipTM=0.213 tol=12.6 2024-07-09 14:41:05,457 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=22.3 pTM=0.203 ipTM=0.21 tol=10.6 2024-07-09 14:41:20,303 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=22.3 pTM=0.198 ipTM=0.208 tol=7.71 2024-07-09 14:41:35,146 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=22.4 pTM=0.197 ipTM=0.206 tol=8.83 2024-07-09 14:41:49,991 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=22.3 pTM=0.193 ipTM=0.204 tol=4.77 2024-07-09 14:42:04,839 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=22.6 pTM=0.197 ipTM=0.205 tol=5.66 2024-07-09 14:42:19,674 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=22.5 pTM=0.195 ipTM=0.207 tol=4.54 2024-07-09 14:42:34,509 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=22.5 pTM=0.197 ipTM=0.207 tol=4.28 2024-07-09 14:42:49,361 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=22.6 pTM=0.195 ipTM=0.206 tol=4.37 2024-07-09 14:43:04,209 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=22.6 pTM=0.195 ipTM=0.208 tol=4.31 2024-07-09 14:43:19,041 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=22.4 pTM=0.195 ipTM=0.207 tol=3.28 2024-07-09 14:43:33,891 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=22.4 pTM=0.195 ipTM=0.207 tol=3.52 2024-07-09 14:43:48,741 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=22.5 pTM=0.194 ipTM=0.204 tol=3.38 2024-07-09 14:44:03,580 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=22.4 pTM=0.195 ipTM=0.209 tol=3.85 2024-07-09 14:44:18,429 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=22.9 pTM=0.194 ipTM=0.206 tol=4.97 2024-07-09 14:44:33,272 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=22.4 pTM=0.199 ipTM=0.212 tol=6.61 2024-07-09 14:44:48,112 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=22.5 pTM=0.197 ipTM=0.208 tol=4.83 2024-07-09 14:45:02,955 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=22.5 pTM=0.198 ipTM=0.21 tol=3.89 2024-07-09 14:45:17,797 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=22.7 pTM=0.196 ipTM=0.208 tol=4.69 2024-07-09 14:45:32,633 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=22.5 pTM=0.193 ipTM=0.207 tol=4.35 2024-07-09 14:45:47,476 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=22.5 pTM=0.194 ipTM=0.208 tol=6.66 2024-07-09 14:46:02,329 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=22.6 pTM=0.195 ipTM=0.209 tol=4.49 2024-07-09 14:46:17,176 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=22.7 pTM=0.195 ipTM=0.209 tol=4.86 2024-07-09 14:46:32,020 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=22.6 pTM=0.196 ipTM=0.21 tol=3.94 2024-07-09 14:46:46,869 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=22.6 pTM=0.194 ipTM=0.207 tol=2.84 2024-07-09 14:47:01,719 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=22.6 pTM=0.195 ipTM=0.208 tol=3.76 2024-07-09 14:47:16,580 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=22.4 pTM=0.194 ipTM=0.208 tol=5.5 2024-07-09 14:47:31,426 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=22.5 pTM=0.197 ipTM=0.211 tol=4.96 2024-07-09 14:47:46,281 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=22.5 pTM=0.196 ipTM=0.211 tol=5.05 2024-07-09 14:48:01,125 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=22.6 pTM=0.198 ipTM=0.212 tol=3.79 2024-07-09 14:48:01,126 alphafold2_multimer_v3_model_2_seed_000 took 460.1s (30 recycles) 2024-07-09 14:48:16,506 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=25.1 pTM=0.217 ipTM=0.222 2024-07-09 14:48:31,465 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=24.4 pTM=0.198 ipTM=0.212 tol=12.4 2024-07-09 14:48:46,427 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=24.2 pTM=0.2 ipTM=0.207 tol=13.2 2024-07-09 14:49:01,374 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=24.4 pTM=0.2 ipTM=0.215 tol=11.7 2024-07-09 14:49:16,336 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=24.3 pTM=0.201 ipTM=0.21 tol=8.06 2024-07-09 14:49:31,290 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=24.2 pTM=0.199 ipTM=0.21 tol=4.92 2024-07-09 14:49:46,241 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=24.3 pTM=0.194 ipTM=0.203 tol=6.63 2024-07-09 14:50:01,197 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=24.1 pTM=0.193 ipTM=0.202 tol=5.94 2024-07-09 14:50:16,164 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=24.2 pTM=0.192 ipTM=0.2 tol=4.57 2024-07-09 14:50:31,118 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=24.3 pTM=0.194 ipTM=0.205 tol=4.5 2024-07-09 14:50:46,076 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=24.2 pTM=0.192 ipTM=0.203 tol=3.72 2024-07-09 14:51:01,033 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=24.2 pTM=0.19 ipTM=0.2 tol=3.73 2024-07-09 14:51:15,982 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=24.1 pTM=0.19 ipTM=0.202 tol=3.67 2024-07-09 14:51:30,945 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=24.2 pTM=0.189 ipTM=0.201 tol=4.34 2024-07-09 14:51:45,905 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=24.2 pTM=0.189 ipTM=0.203 tol=7.78 2024-07-09 14:52:00,871 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=24.3 pTM=0.188 ipTM=0.198 tol=5.15 2024-07-09 14:52:15,821 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=24.3 pTM=0.188 ipTM=0.201 tol=4.69 2024-07-09 14:52:30,768 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=24.2 pTM=0.19 ipTM=0.201 tol=3.94 2024-07-09 14:52:45,714 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=24.3 pTM=0.191 ipTM=0.202 tol=5.38 2024-07-09 14:53:00,656 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=24.2 pTM=0.19 ipTM=0.199 tol=3.92 2024-07-09 14:53:15,595 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=24.1 pTM=0.191 ipTM=0.202 tol=5.34 2024-07-09 14:53:30,546 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=24.2 pTM=0.192 ipTM=0.201 tol=4.84 2024-07-09 14:53:45,494 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=24.1 pTM=0.193 ipTM=0.205 tol=4.77 2024-07-09 14:54:00,447 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=24.3 pTM=0.194 ipTM=0.203 tol=7.2 2024-07-09 14:54:15,410 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=24.2 pTM=0.194 ipTM=0.203 tol=4.13 2024-07-09 14:54:30,372 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=24.2 pTM=0.192 ipTM=0.202 tol=3.51 2024-07-09 14:54:45,334 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=24.4 pTM=0.195 ipTM=0.203 tol=3.68 2024-07-09 14:55:00,291 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=24.4 pTM=0.194 ipTM=0.204 tol=4.08 2024-07-09 14:55:15,251 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=24.4 pTM=0.194 ipTM=0.205 tol=4.35 2024-07-09 14:55:30,208 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=24.3 pTM=0.196 ipTM=0.208 tol=5.48 2024-07-09 14:55:45,171 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=24.3 pTM=0.194 ipTM=0.204 tol=5.81 2024-07-09 14:55:45,172 alphafold2_multimer_v3_model_3_seed_000 took 463.6s (30 recycles) 2024-07-09 14:56:00,453 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=23.1 pTM=0.215 ipTM=0.23 2024-07-09 14:56:15,312 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=23.7 pTM=0.219 ipTM=0.227 tol=14.1 2024-07-09 14:56:30,186 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=23.9 pTM=0.215 ipTM=0.23 tol=13 2024-07-09 14:56:45,067 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=24 pTM=0.212 ipTM=0.231 tol=9.4 2024-07-09 14:56:59,949 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=24 pTM=0.212 ipTM=0.23 tol=4.14 2024-07-09 14:57:14,825 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=23.8 pTM=0.211 ipTM=0.232 tol=6.55 2024-07-09 14:57:29,691 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=24 pTM=0.214 ipTM=0.233 tol=9.76 2024-07-09 14:57:44,562 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=24.1 pTM=0.213 ipTM=0.237 tol=5.93 2024-07-09 14:57:59,434 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=24.2 pTM=0.211 ipTM=0.233 tol=7.17 2024-07-09 14:58:14,309 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=24.1 pTM=0.21 ipTM=0.231 tol=8.54 2024-07-09 14:58:29,192 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=24 pTM=0.21 ipTM=0.232 tol=3.21 2024-07-09 14:58:44,075 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=24 pTM=0.209 ipTM=0.231 tol=2.28 2024-07-09 14:58:58,968 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=23.9 pTM=0.208 ipTM=0.23 tol=7.88 2024-07-09 14:59:13,862 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=24 pTM=0.207 ipTM=0.23 tol=3.21 2024-07-09 14:59:28,752 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=24 pTM=0.208 ipTM=0.232 tol=6.7 2024-07-09 14:59:43,640 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=23.9 pTM=0.207 ipTM=0.231 tol=6.09 2024-07-09 14:59:58,521 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=24 pTM=0.205 ipTM=0.228 tol=6.11 2024-07-09 15:00:13,403 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=24 pTM=0.206 ipTM=0.23 tol=2.84 2024-07-09 15:00:28,280 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=24.1 pTM=0.206 ipTM=0.228 tol=2.32 2024-07-09 15:00:43,158 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=24.2 pTM=0.206 ipTM=0.23 tol=6.16 2024-07-09 15:00:58,043 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=24.2 pTM=0.204 ipTM=0.227 tol=5.57 2024-07-09 15:01:12,928 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=24.2 pTM=0.205 ipTM=0.228 tol=3.08 2024-07-09 15:01:27,846 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=24.3 pTM=0.205 ipTM=0.228 tol=2.76 2024-07-09 15:01:42,728 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=24.3 pTM=0.205 ipTM=0.227 tol=3.74 2024-07-09 15:01:57,608 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=24.4 pTM=0.205 ipTM=0.226 tol=3.04 2024-07-09 15:02:12,496 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=24.4 pTM=0.204 ipTM=0.223 tol=3.2 2024-07-09 15:02:27,379 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=24.4 pTM=0.205 ipTM=0.228 tol=6.76 2024-07-09 15:02:42,296 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=24.3 pTM=0.204 ipTM=0.223 tol=6.77 2024-07-09 15:02:57,185 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=24.3 pTM=0.205 ipTM=0.227 tol=2.12 2024-07-09 15:03:12,058 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=24.1 pTM=0.205 ipTM=0.222 tol=2.77 2024-07-09 15:03:26,942 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=24.2 pTM=0.205 ipTM=0.224 tol=2.08 2024-07-09 15:03:26,942 alphafold2_multimer_v3_model_4_seed_000 took 461.3s (30 recycles) 2024-07-09 15:03:42,353 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=22.8 pTM=0.222 ipTM=0.221 2024-07-09 15:03:57,326 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=23 pTM=0.197 ipTM=0.196 tol=23.9 2024-07-09 15:04:12,275 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=23.4 pTM=0.214 ipTM=0.219 tol=14.6 2024-07-09 15:04:27,231 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=23 pTM=0.194 ipTM=0.211 tol=11 2024-07-09 15:04:42,199 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=23 pTM=0.197 ipTM=0.22 tol=13.1 2024-07-09 15:04:57,138 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=23 pTM=0.198 ipTM=0.214 tol=10.5 2024-07-09 15:05:12,098 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=23.1 pTM=0.2 ipTM=0.222 tol=10.5 2024-07-09 15:05:27,059 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=23.1 pTM=0.2 ipTM=0.22 tol=5.07 2024-07-09 15:05:42,013 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=23.3 pTM=0.2 ipTM=0.219 tol=8.88 2024-07-09 15:05:56,964 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=23.3 pTM=0.2 ipTM=0.218 tol=9.46 2024-07-09 15:06:11,910 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=23 pTM=0.199 ipTM=0.218 tol=6.26 2024-07-09 15:06:26,851 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=23.1 pTM=0.198 ipTM=0.215 tol=7.89 2024-07-09 15:06:41,791 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=23.1 pTM=0.197 ipTM=0.216 tol=4.19 2024-07-09 15:06:56,756 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=23.1 pTM=0.194 ipTM=0.215 tol=8.69 2024-07-09 15:07:11,706 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=23 pTM=0.195 ipTM=0.215 tol=6.66 2024-07-09 15:07:26,661 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=23.2 pTM=0.194 ipTM=0.214 tol=7.41 2024-07-09 15:07:41,602 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=23.2 pTM=0.193 ipTM=0.215 tol=4.13 2024-07-09 15:07:56,531 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=23 pTM=0.194 ipTM=0.217 tol=5.05 2024-07-09 15:08:11,460 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=23.1 pTM=0.195 ipTM=0.217 tol=4.44 2024-07-09 15:08:26,399 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=23.2 pTM=0.192 ipTM=0.215 tol=5.02 2024-07-09 15:08:41,353 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=23.2 pTM=0.188 ipTM=0.214 tol=4.51 2024-07-09 15:08:56,307 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=23.2 pTM=0.188 ipTM=0.212 tol=3.61 2024-07-09 15:09:11,253 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=23.2 pTM=0.191 ipTM=0.214 tol=8.32 2024-07-09 15:09:26,209 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=23.2 pTM=0.188 ipTM=0.214 tol=9.19 2024-07-09 15:09:41,149 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=23.1 pTM=0.19 ipTM=0.216 tol=5 2024-07-09 15:09:56,094 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=23.1 pTM=0.187 ipTM=0.213 tol=4.93 2024-07-09 15:10:11,062 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=23.2 pTM=0.188 ipTM=0.215 tol=8.71 2024-07-09 15:10:26,061 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=23.1 pTM=0.187 ipTM=0.214 tol=9.8 2024-07-09 15:10:41,029 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=23 pTM=0.188 ipTM=0.218 tol=11.6 2024-07-09 15:10:55,985 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=23.1 pTM=0.19 ipTM=0.218 tol=4 2024-07-09 15:11:10,925 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=23.1 pTM=0.189 ipTM=0.217 tol=8.97 2024-07-09 15:11:10,926 alphafold2_multimer_v3_model_5_seed_000 took 463.5s (30 recycles) 2024-07-09 15:11:11,387 reranking models by 'multimer' metric 2024-07-09 15:11:12,476 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-09 15:12:24,437 Relaxation took 73.0s 2024-07-09 15:12:24,437 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=24.2 pTM=0.205 ipTM=0.224 2024-07-09 15:13:47,072 Relaxation took 82.6s 2024-07-09 15:13:47,072 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=23.1 pTM=0.189 ipTM=0.217 2024-07-09 15:14:51,393 Relaxation took 64.3s 2024-07-09 15:14:51,393 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=22.6 pTM=0.198 ipTM=0.212 2024-07-09 15:16:07,771 Relaxation took 76.4s 2024-07-09 15:16:07,771 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=24.3 pTM=0.194 ipTM=0.204 2024-07-09 15:17:26,299 Relaxation took 78.5s 2024-07-09 15:17:26,299 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=23.7 pTM=0.178 ipTM=0.205 2024-07-09 15:17:27,846 Done