2024-07-09 14:43:15,891 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 14:43:16,204 Running on GPU
2024-07-09 14:43:20,285 Found 6 citations for tools or databases
2024-07-09 14:43:20,285 Query 1/1: DAPK3_PCX4 (length 1626)
2024-07-09 14:43:20,747 Sleeping for 6s. Reason: PENDING
2024-07-09 14:43:27,181 Sleeping for 10s. Reason: RUNNING
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2024-07-09 14:44:39,178 Sleeping for 9s. Reason: RUNNING
2024-07-09 14:44:48,603 Sleeping for 9s. Reason: RUNNING
2024-07-09 14:44:58,025 Sleeping for 6s. Reason: RUNNING
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2024-07-09 14:45:19,094 Sleeping for 8s. Reason: RUNNING
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2024-07-09 14:45:36,954 Sleeping for 8s. Reason: RUNNING
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2024-07-09 14:46:11,011 Sleeping for 5s. Reason: RUNNING
2024-07-09 14:46:16,433 Sleeping for 10s. Reason: RUNNING
2024-07-09 14:46:30,506 Sleeping for 10s. Reason: PENDING
2024-07-09 14:46:40,934 Sleeping for 6s. Reason: RUNNING
2024-07-09 14:46:47,353 Sleeping for 7s. Reason: RUNNING
2024-07-09 14:46:54,768 Sleeping for 6s. Reason: RUNNING
2024-07-09 14:47:01,193 Sleeping for 8s. Reason: RUNNING
2024-07-09 14:47:09,626 Sleeping for 9s. Reason: RUNNING
2024-07-09 14:47:19,224 Sleeping for 9s. Reason: RUNNING
2024-07-09 14:47:28,645 Sleeping for 10s. Reason: RUNNING
2024-07-09 14:47:39,060 Sleeping for 10s. Reason: RUNNING
2024-07-09 14:47:49,478 Sleeping for 9s. Reason: RUNNING
2024-07-09 14:47:58,927 Sleeping for 8s. Reason: RUNNING
2024-07-09 14:48:07,380 Sleeping for 6s. Reason: RUNNING
2024-07-09 14:48:13,802 Sleeping for 10s. Reason: RUNNING
2024-07-09 14:48:24,234 Sleeping for 8s. Reason: RUNNING
2024-07-09 14:48:37,040 Setting max_seq=508, max_extra_seq=2048
2024-07-09 14:52:33,034 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74 pTM=0.654 ipTM=0.254
2024-07-09 14:53:54,377 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74.7 pTM=0.66 ipTM=0.249 tol=5.92
2024-07-09 14:55:15,749 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.2 pTM=0.654 ipTM=0.23 tol=9.8
2024-07-09 14:56:37,167 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.8 pTM=0.652 ipTM=0.222 tol=4.36
2024-07-09 14:57:58,615 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74 pTM=0.65 ipTM=0.213 tol=2.58
2024-07-09 14:59:20,000 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.7 pTM=0.648 ipTM=0.211 tol=2.86
2024-07-09 15:00:41,403 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.7 pTM=0.648 ipTM=0.211 tol=1.93
2024-07-09 15:02:02,819 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.8 pTM=0.65 ipTM=0.217 tol=2.23
2024-07-09 15:03:24,318 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.9 pTM=0.652 ipTM=0.215 tol=3.15
2024-07-09 15:04:45,798 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.8 pTM=0.652 ipTM=0.22 tol=2.64
2024-07-09 15:06:07,274 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.7 pTM=0.652 ipTM=0.217 tol=2.35
2024-07-09 15:07:28,775 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.1 pTM=0.654 ipTM=0.226 tol=2.57
2024-07-09 15:08:50,219 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74 pTM=0.652 ipTM=0.214 tol=2.71
2024-07-09 15:10:11,671 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.9 pTM=0.653 ipTM=0.222 tol=2.08
2024-07-09 15:11:33,164 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.8 pTM=0.653 ipTM=0.219 tol=1.46
2024-07-09 15:12:54,643 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.9 pTM=0.653 ipTM=0.221 tol=2.11
2024-07-09 15:14:16,100 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.7 pTM=0.655 ipTM=0.221 tol=4.02
2024-07-09 15:15:37,541 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.9 pTM=0.653 ipTM=0.223 tol=2.57
2024-07-09 15:16:58,938 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.2 pTM=0.655 ipTM=0.221 tol=3.46
2024-07-09 15:18:20,317 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74 pTM=0.652 ipTM=0.223 tol=2.99
2024-07-09 15:19:41,698 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.1 pTM=0.651 ipTM=0.219 tol=3.04
2024-07-09 15:21:03,119 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74 pTM=0.654 ipTM=0.224 tol=1.57
2024-07-09 15:22:24,576 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.9 pTM=0.652 ipTM=0.215 tol=2.47
2024-07-09 15:23:45,990 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.1 pTM=0.652 ipTM=0.22 tol=2.04
2024-07-09 15:25:07,457 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.9 pTM=0.653 ipTM=0.217 tol=2.6
2024-07-09 15:26:28,855 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.8 pTM=0.653 ipTM=0.227 tol=2.47
2024-07-09 15:27:50,277 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.8 pTM=0.652 ipTM=0.218 tol=1.8
2024-07-09 15:29:11,689 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.9 pTM=0.652 ipTM=0.223 tol=1.62
2024-07-09 15:30:33,099 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.9 pTM=0.652 ipTM=0.216 tol=1.51
2024-07-09 15:31:54,566 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.8 pTM=0.652 ipTM=0.221 tol=2.15
2024-07-09 15:33:16,021 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.9 pTM=0.652 ipTM=0.217 tol=3.4
2024-07-09 15:33:16,023 alphafold2_multimer_v3_model_1_seed_000 took 2673.8s (30 recycles)
2024-07-09 15:34:39,127 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.4 pTM=0.662 ipTM=0.26
2024-07-09 15:36:00,658 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.6 pTM=0.657 ipTM=0.235 tol=6.12
2024-07-09 15:37:22,238 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.5 pTM=0.656 ipTM=0.231 tol=5.39
2024-07-09 15:38:43,846 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.6 pTM=0.652 ipTM=0.229 tol=5.65
2024-07-09 15:40:05,503 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.8 pTM=0.652 ipTM=0.223 tol=1.83
2024-07-09 15:41:27,105 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.9 pTM=0.653 ipTM=0.226 tol=2.48
2024-07-09 15:42:48,689 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.8 pTM=0.652 ipTM=0.225 tol=2.69
2024-07-09 15:44:10,279 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.2 pTM=0.653 ipTM=0.226 tol=5.02
2024-07-09 15:45:31,863 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.1 pTM=0.654 ipTM=0.228 tol=3.97
2024-07-09 15:46:53,401 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.1 pTM=0.653 ipTM=0.226 tol=3.65
2024-07-09 15:48:14,959 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.2 pTM=0.654 ipTM=0.226 tol=3.41
2024-07-09 15:49:36,510 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.2 pTM=0.652 ipTM=0.224 tol=1.29
2024-07-09 15:50:58,069 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.2 pTM=0.65 ipTM=0.22 tol=1.88
2024-07-09 15:52:19,598 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.2 pTM=0.651 ipTM=0.223 tol=1.73
2024-07-09 15:53:41,128 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.3 pTM=0.654 ipTM=0.225 tol=2.57
2024-07-09 15:55:02,661 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.2 pTM=0.654 ipTM=0.229 tol=2.63
2024-07-09 15:56:24,269 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.4 pTM=0.653 ipTM=0.222 tol=1.87
2024-07-09 15:57:45,872 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.3 pTM=0.654 ipTM=0.229 tol=1.38
2024-07-09 15:59:07,434 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.5 pTM=0.655 ipTM=0.227 tol=0.873
2024-07-09 16:00:28,985 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.4 pTM=0.654 ipTM=0.231 tol=2.62
2024-07-09 16:01:50,539 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.5 pTM=0.656 ipTM=0.235 tol=2.86
2024-07-09 16:03:12,053 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.4 pTM=0.654 ipTM=0.233 tol=1.87
2024-07-09 16:04:33,576 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.6 pTM=0.655 ipTM=0.23 tol=1.28
2024-07-09 16:05:55,158 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.6 pTM=0.652 ipTM=0.225 tol=1.02
2024-07-09 16:07:16,722 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.6 pTM=0.654 ipTM=0.226 tol=0.996
2024-07-09 16:08:38,204 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.4 pTM=0.653 ipTM=0.229 tol=0.945
2024-07-09 16:09:59,713 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.8 pTM=0.655 ipTM=0.23 tol=1.12
2024-07-09 16:11:21,137 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.6 pTM=0.654 ipTM=0.233 tol=1.01
2024-07-09 16:12:42,585 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.6 pTM=0.654 ipTM=0.227 tol=0.875
2024-07-09 16:14:04,082 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.4 pTM=0.653 ipTM=0.228 tol=0.916
2024-07-09 16:15:25,626 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.6 pTM=0.655 ipTM=0.234 tol=1.48
2024-07-09 16:15:25,627 alphafold2_multimer_v3_model_2_seed_000 took 2528.1s (30 recycles)
2024-07-09 16:16:48,829 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.5 pTM=0.651 ipTM=0.247
2024-07-09 16:18:10,499 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.4 pTM=0.661 ipTM=0.262 tol=11.2
2024-07-09 16:19:32,086 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.5 pTM=0.66 ipTM=0.266 tol=6.04
2024-07-09 16:20:53,624 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.5 pTM=0.658 ipTM=0.264 tol=2.98
2024-07-09 16:22:15,157 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.4 pTM=0.658 ipTM=0.261 tol=2.26
2024-07-09 16:23:36,635 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.3 pTM=0.658 ipTM=0.272 tol=2.09
2024-07-09 16:24:58,160 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.6 pTM=0.661 ipTM=0.275 tol=2.23
2024-07-09 16:26:19,699 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.6 pTM=0.66 ipTM=0.273 tol=2.45
2024-07-09 16:27:41,265 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.8 pTM=0.661 ipTM=0.279 tol=3.3
2024-07-09 16:29:02,775 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.6 pTM=0.66 ipTM=0.279 tol=2.93
2024-07-09 16:30:24,301 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.6 pTM=0.662 ipTM=0.286 tol=3
2024-07-09 16:31:45,811 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.6 pTM=0.658 ipTM=0.274 tol=3.02
2024-07-09 16:33:07,213 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.8 pTM=0.661 ipTM=0.285 tol=3
2024-07-09 16:34:28,720 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.9 pTM=0.661 ipTM=0.28 tol=3.14
2024-07-09 16:35:50,208 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.1 pTM=0.664 ipTM=0.289 tol=3.31
2024-07-09 16:37:11,697 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.2 pTM=0.663 ipTM=0.287 tol=2.12
2024-07-09 16:38:33,151 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.4 pTM=0.664 ipTM=0.289 tol=1.36
2024-07-09 16:39:54,604 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73 pTM=0.661 ipTM=0.281 tol=3.43
2024-07-09 16:41:16,038 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.5 pTM=0.667 ipTM=0.298 tol=3.01
2024-07-09 16:42:37,502 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.4 pTM=0.664 ipTM=0.294 tol=2.73
2024-07-09 16:43:58,901 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.4 pTM=0.667 ipTM=0.303 tol=2.18
2024-07-09 16:45:20,293 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.2 pTM=0.663 ipTM=0.285 tol=2.4
2024-07-09 16:46:41,722 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.1 pTM=0.662 ipTM=0.282 tol=3
2024-07-09 16:48:03,216 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.2 pTM=0.662 ipTM=0.282 tol=3.39
2024-07-09 16:49:24,748 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.1 pTM=0.662 ipTM=0.282 tol=2.93
2024-07-09 16:50:46,238 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.1 pTM=0.662 ipTM=0.283 tol=2.88
2024-07-09 16:52:07,728 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.2 pTM=0.664 ipTM=0.292 tol=2.25
2024-07-09 16:53:29,192 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.9 pTM=0.66 ipTM=0.284 tol=2.66
2024-07-09 16:54:50,695 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73 pTM=0.664 ipTM=0.292 tol=1.85
2024-07-09 16:56:12,150 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.9 pTM=0.662 ipTM=0.289 tol=3.37
2024-07-09 16:57:33,701 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=73.1 pTM=0.664 ipTM=0.291 tol=4.63
2024-07-09 16:57:33,703 alphafold2_multimer_v3_model_3_seed_000 took 2526.5s (30 recycles)
2024-07-09 16:58:56,793 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.9 pTM=0.646 ipTM=0.241
2024-07-09 17:00:18,345 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72.3 pTM=0.656 ipTM=0.248 tol=8.23
2024-07-09 17:01:39,917 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.4 pTM=0.655 ipTM=0.249 tol=5.21
2024-07-09 17:03:01,537 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.6 pTM=0.65 ipTM=0.229 tol=4.42
2024-07-09 17:04:23,076 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.8 pTM=0.648 ipTM=0.228 tol=2.47
2024-07-09 17:05:44,694 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.8 pTM=0.649 ipTM=0.225 tol=4.18
2024-07-09 17:07:06,243 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.6 pTM=0.648 ipTM=0.226 tol=2.65
2024-07-09 17:08:27,829 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.7 pTM=0.647 ipTM=0.225 tol=3.52
2024-07-09 17:09:49,437 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.8 pTM=0.647 ipTM=0.225 tol=3.05
2024-07-09 17:11:10,961 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.7 pTM=0.646 ipTM=0.224 tol=3.55
2024-07-09 17:12:32,472 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.6 pTM=0.645 ipTM=0.226 tol=3.6
2024-07-09 17:13:53,967 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.6 pTM=0.645 ipTM=0.225 tol=2.13
2024-07-09 17:15:15,428 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.3 pTM=0.643 ipTM=0.225 tol=2.58
2024-07-09 17:16:36,890 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.6 pTM=0.644 ipTM=0.225 tol=2.07
2024-07-09 17:17:58,356 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.6 pTM=0.645 ipTM=0.226 tol=2.38
2024-07-09 17:19:19,811 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.6 pTM=0.643 ipTM=0.225 tol=2.42
2024-07-09 17:20:41,389 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=71.7 pTM=0.645 ipTM=0.224 tol=4.09
2024-07-09 17:22:02,886 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.6 pTM=0.644 ipTM=0.225 tol=2.53
2024-07-09 17:23:24,341 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.6 pTM=0.646 ipTM=0.226 tol=2.33
2024-07-09 17:24:45,805 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.7 pTM=0.645 ipTM=0.225 tol=2
2024-07-09 17:26:07,260 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.6 pTM=0.646 ipTM=0.227 tol=1.87
2024-07-09 17:27:28,727 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.4 pTM=0.644 ipTM=0.224 tol=2.7
2024-07-09 17:28:50,241 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.4 pTM=0.645 ipTM=0.223 tol=2.3
2024-07-09 17:30:11,748 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.4 pTM=0.643 ipTM=0.222 tol=2.62
2024-07-09 17:31:33,296 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.6 pTM=0.645 ipTM=0.224 tol=3
2024-07-09 17:32:54,829 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.2 pTM=0.644 ipTM=0.223 tol=4.48
2024-07-09 17:34:16,362 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.8 pTM=0.646 ipTM=0.225 tol=3.26
2024-07-09 17:35:37,902 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.6 pTM=0.645 ipTM=0.226 tol=2.23
2024-07-09 17:36:59,448 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.3 pTM=0.643 ipTM=0.226 tol=2.88
2024-07-09 17:38:20,975 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.7 pTM=0.646 ipTM=0.228 tol=3.29
2024-07-09 17:39:42,450 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.7 pTM=0.645 ipTM=0.228 tol=2.73
2024-07-09 17:39:42,452 alphafold2_multimer_v3_model_4_seed_000 took 2527.2s (30 recycles)
2024-07-09 17:41:05,542 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.4 pTM=0.646 ipTM=0.237
2024-07-09 17:42:27,156 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72 pTM=0.657 ipTM=0.242 tol=9.73
2024-07-09 17:43:48,797 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.2 pTM=0.653 ipTM=0.229 tol=6.13
2024-07-09 17:45:10,431 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.4 pTM=0.657 ipTM=0.236 tol=2.81
2024-07-09 17:46:31,991 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.4 pTM=0.654 ipTM=0.237 tol=3.57
2024-07-09 17:47:53,588 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.6 pTM=0.656 ipTM=0.24 tol=3.59
2024-07-09 17:49:15,128 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.7 pTM=0.658 ipTM=0.24 tol=2.94
2024-07-09 17:50:36,731 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.9 pTM=0.656 ipTM=0.239 tol=2.54
2024-07-09 17:51:58,288 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.8 pTM=0.658 ipTM=0.243 tol=2.9
2024-07-09 17:53:19,912 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.9 pTM=0.656 ipTM=0.238 tol=3.62
2024-07-09 17:54:41,504 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.8 pTM=0.656 ipTM=0.239 tol=2.88
2024-07-09 17:56:03,047 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.9 pTM=0.655 ipTM=0.241 tol=2.43
2024-07-09 17:57:24,637 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.8 pTM=0.655 ipTM=0.24 tol=1.96
2024-07-09 17:58:46,157 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.8 pTM=0.656 ipTM=0.243 tol=1.78
2024-07-09 18:00:07,738 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.8 pTM=0.657 ipTM=0.24 tol=2.02
2024-07-09 18:01:29,367 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.9 pTM=0.658 ipTM=0.244 tol=6.33
2024-07-09 18:02:50,905 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.8 pTM=0.657 ipTM=0.244 tol=5.29
2024-07-09 18:04:12,392 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.8 pTM=0.66 ipTM=0.255 tol=5.49
2024-07-09 18:05:33,920 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73 pTM=0.661 ipTM=0.257 tol=5.43
2024-07-09 18:06:55,428 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.1 pTM=0.662 ipTM=0.259 tol=3.72
2024-07-09 18:08:16,905 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73.1 pTM=0.662 ipTM=0.265 tol=2.02
2024-07-09 18:09:38,447 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.1 pTM=0.665 ipTM=0.266 tol=2.26
2024-07-09 18:10:59,981 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.9 pTM=0.66 ipTM=0.259 tol=2.06
2024-07-09 18:12:21,473 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73 pTM=0.661 ipTM=0.26 tol=2.75
2024-07-09 18:13:42,974 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=73.3 pTM=0.667 ipTM=0.308 tol=3.77
2024-07-09 18:15:04,491 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=73.2 pTM=0.662 ipTM=0.27 tol=3.63
2024-07-09 18:16:26,039 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=73.2 pTM=0.662 ipTM=0.263 tol=2.28
2024-07-09 18:17:47,600 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.2 pTM=0.66 ipTM=0.258 tol=1.61
2024-07-09 18:19:09,091 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.9 pTM=0.659 ipTM=0.256 tol=1.23
2024-07-09 18:20:30,636 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73 pTM=0.661 ipTM=0.257 tol=1.83
2024-07-09 18:21:52,179 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.1 pTM=0.662 ipTM=0.263 tol=2.34
2024-07-09 18:21:52,180 alphafold2_multimer_v3_model_5_seed_000 took 2528.2s (30 recycles)
2024-07-09 18:21:53,719 reranking models by 'multimer' metric
2024-07-09 18:21:55,343 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 18:26:24,739 Relaxation took 271.0s
2024-07-09 18:26:24,740 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.1 pTM=0.664 ipTM=0.291
2024-07-09 18:30:29,944 Relaxation took 245.2s
2024-07-09 18:30:29,944 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.1 pTM=0.662 ipTM=0.263
2024-07-09 18:33:11,884 Relaxation took 161.9s
2024-07-09 18:33:11,884 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.6 pTM=0.655 ipTM=0.234
2024-07-09 18:35:42,299 Relaxation took 150.4s
2024-07-09 18:35:42,299 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.7 pTM=0.645 ipTM=0.228
2024-07-09 18:39:29,346 Relaxation took 227.0s
2024-07-09 18:39:29,346 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.9 pTM=0.652 ipTM=0.217
2024-07-09 18:39:32,976 Done