2024-07-09 15:15:58,510 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 15:15:58,820 Running on GPU
2024-07-09 15:16:02,899 Found 6 citations for tools or databases
2024-07-09 15:16:02,899 Query 1/1: DCLK1_ZN789 (length 1165)
2024-07-09 15:16:03,363 Sleeping for 8s. Reason: PENDING
2024-07-09 15:16:11,787 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:16:22,209 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:16:32,642 Sleeping for 8s. Reason: RUNNING
2024-07-09 15:16:41,594 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:16:52,028 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:16:59,446 Sleeping for 9s. Reason: RUNNING
2024-07-09 15:17:08,870 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:17:16,303 Sleeping for 8s. Reason: RUNNING
2024-07-09 15:17:24,715 Sleeping for 8s. Reason: RUNNING
2024-07-09 15:17:33,135 Sleeping for 5s. Reason: RUNNING
2024-07-09 15:17:38,557 Sleeping for 5s. Reason: RUNNING
2024-07-09 15:17:43,961 Sleeping for 6s. Reason: RUNNING
2024-07-09 15:17:50,395 Sleeping for 6s. Reason: RUNNING
2024-07-09 15:17:57,835 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:18:08,248 Sleeping for 6s. Reason: RUNNING
2024-07-09 15:18:14,679 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:18:25,601 Sleeping for 9s. Reason: RUNNING
2024-07-09 15:18:35,529 Sleeping for 8s. Reason: RUNNING
2024-07-09 15:18:43,957 Sleeping for 6s. Reason: RUNNING
2024-07-09 15:18:50,380 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:19:00,789 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:19:08,219 Sleeping for 6s. Reason: RUNNING
2024-07-09 15:19:14,635 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:19:22,093 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:19:29,505 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:19:39,924 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:19:47,337 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:19:54,780 Sleeping for 8s. Reason: RUNNING
2024-07-09 15:20:03,200 Sleeping for 9s. Reason: RUNNING
2024-07-09 15:20:12,630 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:20:23,078 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:21:42,635 Sleeping for 10s. Reason: PENDING
2024-07-09 15:21:53,096 Sleeping for 9s. Reason: RUNNING
2024-07-09 15:22:02,550 Sleeping for 5s. Reason: RUNNING
2024-07-09 15:22:07,950 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:22:15,369 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:22:22,802 Sleeping for 9s. Reason: RUNNING
2024-07-09 15:22:32,242 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:22:42,655 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:22:53,083 Sleeping for 9s. Reason: RUNNING
2024-07-09 15:23:02,512 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:23:12,936 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:23:20,355 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:23:30,781 Sleeping for 8s. Reason: RUNNING
2024-07-09 15:23:39,200 Sleeping for 6s. Reason: RUNNING
2024-07-09 15:23:45,625 Sleeping for 8s. Reason: RUNNING
2024-07-09 15:23:54,065 Sleeping for 8s. Reason: RUNNING
2024-07-09 15:24:02,830 Sleeping for 10s. Reason: RUNNING
2024-07-09 15:24:13,267 Sleeping for 5s. Reason: RUNNING
2024-07-09 15:24:18,699 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:24:26,121 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:24:33,561 Sleeping for 7s. Reason: RUNNING
2024-07-09 15:24:40,973 Sleeping for 8s. Reason: RUNNING
2024-07-09 15:24:56,363 Setting max_seq=508, max_extra_seq=2048
2024-07-09 15:28:21,815 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46 pTM=0.354 ipTM=0.203
2024-07-09 15:28:53,795 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.9 pTM=0.365 ipTM=0.235 tol=10.1
2024-07-09 15:29:25,914 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.4 pTM=0.353 ipTM=0.197 tol=7.8
2024-07-09 15:29:58,122 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=45.7 pTM=0.355 ipTM=0.202 tol=7.27
2024-07-09 15:30:30,383 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.1 pTM=0.362 ipTM=0.204 tol=7.76
2024-07-09 15:31:02,655 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.2 pTM=0.366 ipTM=0.197 tol=6.17
2024-07-09 15:31:34,942 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.2 pTM=0.37 ipTM=0.191 tol=3.23
2024-07-09 15:32:07,244 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.5 pTM=0.371 ipTM=0.19 tol=5.95
2024-07-09 15:32:39,529 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=46.6 pTM=0.373 ipTM=0.185 tol=6.49
2024-07-09 15:33:11,807 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.5 pTM=0.379 ipTM=0.184 tol=5.39
2024-07-09 15:33:44,065 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.9 pTM=0.38 ipTM=0.181 tol=2.33
2024-07-09 15:34:16,327 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.3 pTM=0.38 ipTM=0.181 tol=6.85
2024-07-09 15:34:48,606 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.6 pTM=0.381 ipTM=0.181 tol=6.21
2024-07-09 15:35:20,887 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.2 pTM=0.381 ipTM=0.181 tol=2.47
2024-07-09 15:35:53,156 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.4 pTM=0.38 ipTM=0.178 tol=2.15
2024-07-09 15:36:25,441 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.5 pTM=0.38 ipTM=0.179 tol=6.18
2024-07-09 15:36:57,707 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.6 pTM=0.381 ipTM=0.182 tol=1.73
2024-07-09 15:37:29,989 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.6 pTM=0.381 ipTM=0.181 tol=5.7
2024-07-09 15:38:02,235 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.5 pTM=0.38 ipTM=0.181 tol=5.75
2024-07-09 15:38:34,474 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.6 pTM=0.381 ipTM=0.182 tol=1.63
2024-07-09 15:39:06,725 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.6 pTM=0.381 ipTM=0.182 tol=6.28
2024-07-09 15:39:38,976 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.8 pTM=0.381 ipTM=0.181 tol=6.15
2024-07-09 15:40:11,221 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.7 pTM=0.382 ipTM=0.182 tol=2.18
2024-07-09 15:40:43,478 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48.9 pTM=0.381 ipTM=0.183 tol=2.57
2024-07-09 15:41:15,748 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.8 pTM=0.381 ipTM=0.181 tol=1.75
2024-07-09 15:41:48,025 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.7 pTM=0.381 ipTM=0.182 tol=1.64
2024-07-09 15:42:20,287 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.8 pTM=0.381 ipTM=0.181 tol=1.71
2024-07-09 15:42:52,572 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.8 pTM=0.381 ipTM=0.181 tol=2.12
2024-07-09 15:43:24,867 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.7 pTM=0.381 ipTM=0.181 tol=1.88
2024-07-09 15:43:57,149 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.8 pTM=0.382 ipTM=0.181 tol=1.49
2024-07-09 15:44:29,441 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.5 pTM=0.381 ipTM=0.182 tol=6.01
2024-07-09 15:44:29,442 alphafold2_multimer_v3_model_1_seed_000 took 1167.3s (30 recycles)
2024-07-09 15:45:02,568 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.3 pTM=0.352 ipTM=0.2
2024-07-09 15:45:34,957 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.2 pTM=0.355 ipTM=0.204 tol=12.9
2024-07-09 15:46:07,351 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47 pTM=0.349 ipTM=0.187 tol=11.4
2024-07-09 15:46:39,771 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.1 pTM=0.349 ipTM=0.182 tol=6.39
2024-07-09 15:47:12,235 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47 pTM=0.35 ipTM=0.185 tol=4.38
2024-07-09 15:47:44,672 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=46.9 pTM=0.349 ipTM=0.182 tol=3.53
2024-07-09 15:48:17,112 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.1 pTM=0.348 ipTM=0.179 tol=3.55
2024-07-09 15:48:49,541 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47.2 pTM=0.349 ipTM=0.181 tol=2.38
2024-07-09 15:49:21,953 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47 pTM=0.348 ipTM=0.182 tol=3.98
2024-07-09 15:49:54,357 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.4 pTM=0.35 ipTM=0.185 tol=3.94
2024-07-09 15:50:26,740 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.1 pTM=0.35 ipTM=0.185 tol=2.61
2024-07-09 15:50:59,146 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.4 pTM=0.35 ipTM=0.187 tol=2.86
2024-07-09 15:51:31,523 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.4 pTM=0.35 ipTM=0.186 tol=2.1
2024-07-09 15:52:03,923 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.1 pTM=0.349 ipTM=0.184 tol=2.59
2024-07-09 15:52:36,327 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.2 pTM=0.349 ipTM=0.183 tol=2.19
2024-07-09 15:53:08,739 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.4 pTM=0.349 ipTM=0.183 tol=1.72
2024-07-09 15:53:41,141 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.2 pTM=0.348 ipTM=0.182 tol=1.88
2024-07-09 15:54:13,559 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.4 pTM=0.349 ipTM=0.183 tol=2.67
2024-07-09 15:54:45,964 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.2 pTM=0.349 ipTM=0.182 tol=2.82
2024-07-09 15:55:18,410 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.2 pTM=0.349 ipTM=0.183 tol=2.36
2024-07-09 15:55:50,837 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.1 pTM=0.349 ipTM=0.184 tol=1.73
2024-07-09 15:56:23,275 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.3 pTM=0.35 ipTM=0.182 tol=1.38
2024-07-09 15:56:55,691 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.1 pTM=0.35 ipTM=0.186 tol=2.1
2024-07-09 15:57:28,115 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.2 pTM=0.348 ipTM=0.18 tol=2.66
2024-07-09 15:58:00,535 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47 pTM=0.348 ipTM=0.181 tol=2.98
2024-07-09 15:58:32,955 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.2 pTM=0.347 ipTM=0.179 tol=3.15
2024-07-09 15:59:05,392 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47.2 pTM=0.349 ipTM=0.183 tol=4
2024-07-09 15:59:37,799 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.1 pTM=0.349 ipTM=0.183 tol=3.02
2024-07-09 16:00:10,231 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.1 pTM=0.349 ipTM=0.183 tol=3.12
2024-07-09 16:00:42,638 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.3 pTM=0.349 ipTM=0.183 tol=12.6
2024-07-09 16:01:15,043 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.2 pTM=0.348 ipTM=0.182 tol=5.95
2024-07-09 16:01:15,044 alphafold2_multimer_v3_model_2_seed_000 took 1004.8s (30 recycles)
2024-07-09 16:01:48,366 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46.2 pTM=0.344 ipTM=0.192
2024-07-09 16:02:20,920 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.5 pTM=0.343 ipTM=0.171 tol=14
2024-07-09 16:02:53,480 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45.7 pTM=0.346 ipTM=0.18 tol=15.8
2024-07-09 16:03:26,041 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.2 pTM=0.343 ipTM=0.17 tol=7.2
2024-07-09 16:03:58,609 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.4 pTM=0.345 ipTM=0.176 tol=9.62
2024-07-09 16:04:31,160 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45.6 pTM=0.343 ipTM=0.174 tol=5.38
2024-07-09 16:05:03,701 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45.2 pTM=0.345 ipTM=0.185 tol=12.3
2024-07-09 16:05:36,283 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45.4 pTM=0.338 ipTM=0.168 tol=8.98
2024-07-09 16:06:08,831 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.6 pTM=0.345 ipTM=0.182 tol=9.28
2024-07-09 16:06:41,362 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=46.2 pTM=0.348 ipTM=0.191 tol=6.13
2024-07-09 16:07:13,938 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=46.1 pTM=0.341 ipTM=0.182 tol=5.75
2024-07-09 16:07:46,518 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=46.1 pTM=0.349 ipTM=0.192 tol=5.1
2024-07-09 16:08:19,055 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=46.2 pTM=0.344 ipTM=0.176 tol=3.22
2024-07-09 16:08:51,575 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.8 pTM=0.346 ipTM=0.183 tol=4.17
2024-07-09 16:09:24,095 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=46.2 pTM=0.346 ipTM=0.183 tol=4.42
2024-07-09 16:09:56,602 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=46 pTM=0.344 ipTM=0.179 tol=3.01
2024-07-09 16:10:29,127 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=46.2 pTM=0.346 ipTM=0.183 tol=3.03
2024-07-09 16:11:01,716 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45.8 pTM=0.341 ipTM=0.177 tol=5.29
2024-07-09 16:11:34,249 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=46 pTM=0.346 ipTM=0.183 tol=3.88
2024-07-09 16:12:06,809 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=46.2 pTM=0.343 ipTM=0.175 tol=3.79
2024-07-09 16:12:39,333 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=46.2 pTM=0.347 ipTM=0.185 tol=4.56
2024-07-09 16:13:11,844 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=46 pTM=0.345 ipTM=0.178 tol=3.27
2024-07-09 16:13:44,347 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=46.4 pTM=0.348 ipTM=0.189 tol=3.99
2024-07-09 16:14:16,882 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=46 pTM=0.342 ipTM=0.179 tol=4.09
2024-07-09 16:14:49,385 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.4 pTM=0.346 ipTM=0.186 tol=3.8
2024-07-09 16:15:21,918 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=46.3 pTM=0.342 ipTM=0.173 tol=3.99
2024-07-09 16:15:54,426 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.1 pTM=0.346 ipTM=0.184 tol=3.97
2024-07-09 16:16:26,987 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=45.7 pTM=0.34 ipTM=0.171 tol=6.26
2024-07-09 16:16:59,508 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46 pTM=0.346 ipTM=0.185 tol=5.55
2024-07-09 16:17:32,006 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46.2 pTM=0.344 ipTM=0.176 tol=4.15
2024-07-09 16:18:04,509 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.9 pTM=0.346 ipTM=0.185 tol=3.15
2024-07-09 16:18:04,510 alphafold2_multimer_v3_model_3_seed_000 took 1008.6s (30 recycles)
2024-07-09 16:18:37,788 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.4 pTM=0.34 ipTM=0.192
2024-07-09 16:19:10,247 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.2 pTM=0.344 ipTM=0.184 tol=17
2024-07-09 16:19:42,675 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.9 pTM=0.343 ipTM=0.175 tol=11.7
2024-07-09 16:20:15,147 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.7 pTM=0.343 ipTM=0.172 tol=10.4
2024-07-09 16:20:47,647 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.7 pTM=0.346 ipTM=0.176 tol=5.21
2024-07-09 16:21:20,173 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.7 pTM=0.344 ipTM=0.174 tol=4.78
2024-07-09 16:21:52,669 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.8 pTM=0.345 ipTM=0.176 tol=5.84
2024-07-09 16:22:25,147 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47 pTM=0.34 ipTM=0.166 tol=5.47
2024-07-09 16:22:57,674 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.9 pTM=0.342 ipTM=0.171 tol=7.23
2024-07-09 16:23:30,180 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.2 pTM=0.34 ipTM=0.168 tol=4.87
2024-07-09 16:24:02,682 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47 pTM=0.343 ipTM=0.174 tol=5.96
2024-07-09 16:24:35,192 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.2 pTM=0.34 ipTM=0.168 tol=6.77
2024-07-09 16:25:07,673 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.8 pTM=0.344 ipTM=0.175 tol=7.42
2024-07-09 16:25:40,190 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47.1 pTM=0.343 ipTM=0.172 tol=7.05
2024-07-09 16:26:12,720 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.1 pTM=0.344 ipTM=0.178 tol=5.64
2024-07-09 16:26:45,233 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.4 pTM=0.339 ipTM=0.167 tol=3.29
2024-07-09 16:27:17,712 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.9 pTM=0.344 ipTM=0.178 tol=4.33
2024-07-09 16:27:50,200 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47.2 pTM=0.343 ipTM=0.174 tol=7.03
2024-07-09 16:28:22,706 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.8 pTM=0.342 ipTM=0.17 tol=7.97
2024-07-09 16:28:55,212 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.1 pTM=0.342 ipTM=0.172 tol=4.16
2024-07-09 16:29:27,718 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.9 pTM=0.344 ipTM=0.177 tol=3.69
2024-07-09 16:30:00,228 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.2 pTM=0.341 ipTM=0.169 tol=5.36
2024-07-09 16:30:32,725 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.2 pTM=0.342 ipTM=0.173 tol=3.74
2024-07-09 16:31:05,228 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.4 pTM=0.34 ipTM=0.168 tol=6.71
2024-07-09 16:31:37,709 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.1 pTM=0.341 ipTM=0.172 tol=4.91
2024-07-09 16:32:10,221 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.7 pTM=0.339 ipTM=0.166 tol=6.68
2024-07-09 16:32:42,738 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.1 pTM=0.343 ipTM=0.178 tol=3.8
2024-07-09 16:33:15,244 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.6 pTM=0.34 ipTM=0.169 tol=5.81
2024-07-09 16:33:47,734 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47.3 pTM=0.344 ipTM=0.18 tol=3.39
2024-07-09 16:34:20,237 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.6 pTM=0.341 ipTM=0.17 tol=5.36
2024-07-09 16:34:52,744 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.3 pTM=0.343 ipTM=0.176 tol=3.62
2024-07-09 16:34:52,745 alphafold2_multimer_v3_model_4_seed_000 took 1007.4s (30 recycles)
2024-07-09 16:35:26,032 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.3 pTM=0.338 ipTM=0.18
2024-07-09 16:35:58,537 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.2 pTM=0.345 ipTM=0.218 tol=15.2
2024-07-09 16:36:31,038 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.9 pTM=0.347 ipTM=0.202 tol=9.38
2024-07-09 16:37:03,544 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.9 pTM=0.342 ipTM=0.193 tol=7.52
2024-07-09 16:37:36,042 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.9 pTM=0.343 ipTM=0.188 tol=6.46
2024-07-09 16:38:08,540 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.2 pTM=0.342 ipTM=0.192 tol=4.05
2024-07-09 16:38:41,055 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47 pTM=0.341 ipTM=0.18 tol=9.88
2024-07-09 16:39:13,556 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.1 pTM=0.342 ipTM=0.19 tol=9.52
2024-07-09 16:39:46,052 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.8 pTM=0.342 ipTM=0.187 tol=5.89
2024-07-09 16:40:18,552 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.1 pTM=0.346 ipTM=0.196 tol=3.86
2024-07-09 16:40:51,046 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.1 pTM=0.344 ipTM=0.201 tol=2.11
2024-07-09 16:41:23,576 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.1 pTM=0.345 ipTM=0.204 tol=3.37
2024-07-09 16:41:56,105 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.1 pTM=0.343 ipTM=0.196 tol=2.62
2024-07-09 16:42:28,673 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.9 pTM=0.343 ipTM=0.197 tol=9.52
2024-07-09 16:43:01,175 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47 pTM=0.344 ipTM=0.189 tol=6.9
2024-07-09 16:43:33,687 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.2 pTM=0.342 ipTM=0.197 tol=3.84
2024-07-09 16:44:06,200 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.9 pTM=0.341 ipTM=0.183 tol=8.72
2024-07-09 16:44:38,721 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.2 pTM=0.341 ipTM=0.188 tol=8.78
2024-07-09 16:45:11,250 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.8 pTM=0.34 ipTM=0.177 tol=7.31
2024-07-09 16:45:43,782 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47 pTM=0.341 ipTM=0.187 tol=9.33
2024-07-09 16:46:16,316 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.8 pTM=0.34 ipTM=0.178 tol=12
2024-07-09 16:46:48,857 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.1 pTM=0.342 ipTM=0.188 tol=10
2024-07-09 16:47:21,386 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.9 pTM=0.341 ipTM=0.188 tol=4.36
2024-07-09 16:47:53,931 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.8 pTM=0.34 ipTM=0.185 tol=6.95
2024-07-09 16:48:26,485 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47 pTM=0.338 ipTM=0.177 tol=8.52
2024-07-09 16:48:59,007 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47 pTM=0.341 ipTM=0.188 tol=9.23
2024-07-09 16:49:31,585 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.2 pTM=0.339 ipTM=0.177 tol=6.5
2024-07-09 16:50:04,116 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.1 pTM=0.343 ipTM=0.198 tol=6.3
2024-07-09 16:50:36,671 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.2 pTM=0.339 ipTM=0.183 tol=4.66
2024-07-09 16:51:09,192 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.3 pTM=0.34 ipTM=0.182 tol=2.99
2024-07-09 16:51:41,702 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.1 pTM=0.345 ipTM=0.192 tol=3.63
2024-07-09 16:51:41,703 alphafold2_multimer_v3_model_5_seed_000 took 1008.1s (30 recycles)
2024-07-09 16:51:42,528 reranking models by 'multimer' metric
2024-07-09 16:51:46,307 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 16:55:01,557 Relaxation took 199.0s
2024-07-09 16:55:01,557 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.1 pTM=0.345 ipTM=0.192
2024-07-09 16:57:10,169 Relaxation took 128.6s
2024-07-09 16:57:10,169 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.5 pTM=0.381 ipTM=0.182
2024-07-09 16:59:46,777 Relaxation took 156.6s
2024-07-09 16:59:46,777 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.9 pTM=0.346 ipTM=0.185
2024-07-09 17:02:06,161 Relaxation took 139.4s
2024-07-09 17:02:06,161 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.2 pTM=0.348 ipTM=0.182
2024-07-09 17:05:22,957 Relaxation took 196.8s
2024-07-09 17:05:22,957 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.3 pTM=0.343 ipTM=0.176
2024-07-09 17:05:25,214 Done