2024-07-09 16:00:47,381 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 16:00:47,705 Running on GPU
2024-07-09 16:00:51,766 Found 6 citations for tools or databases
2024-07-09 16:00:51,766 Query 1/1: DEN2B_CLIP1 (length 2575)
2024-07-09 16:00:52,230 Sleeping for 8s. Reason: PENDING
2024-07-09 16:01:00,648 Sleeping for 8s. Reason: RUNNING
2024-07-09 16:01:09,085 Sleeping for 6s. Reason: RUNNING
2024-07-09 16:01:15,511 Sleeping for 5s. Reason: RUNNING
2024-07-09 16:01:20,931 Sleeping for 5s. Reason: RUNNING
2024-07-09 16:01:26,351 Sleeping for 6s. Reason: RUNNING
2024-07-09 16:01:32,763 Sleeping for 7s. Reason: RUNNING
2024-07-09 16:01:40,730 Sleeping for 7s. Reason: RUNNING
2024-07-09 16:01:48,171 Sleeping for 7s. Reason: RUNNING
2024-07-09 16:01:55,598 Sleeping for 5s. Reason: RUNNING
2024-07-09 16:02:01,807 Sleeping for 10s. Reason: RUNNING
2024-07-09 16:02:12,243 Sleeping for 6s. Reason: RUNNING
2024-07-09 16:02:18,667 Sleeping for 7s. Reason: RUNNING
2024-07-09 16:02:49,410 Sleeping for 9s. Reason: PENDING
2024-07-09 16:02:58,856 Sleeping for 10s. Reason: RUNNING
2024-07-09 16:03:09,278 Sleeping for 7s. Reason: RUNNING
2024-07-09 16:03:16,729 Sleeping for 7s. Reason: RUNNING
2024-07-09 16:03:24,666 Sleeping for 5s. Reason: RUNNING
2024-07-09 16:03:30,093 Sleeping for 9s. Reason: RUNNING
2024-07-09 16:03:39,521 Sleeping for 8s. Reason: RUNNING
2024-07-09 16:03:47,936 Sleeping for 6s. Reason: RUNNING
2024-07-09 16:03:54,862 Sleeping for 6s. Reason: RUNNING
2024-07-09 16:04:01,304 Sleeping for 10s. Reason: RUNNING
2024-07-09 16:04:11,733 Sleeping for 6s. Reason: RUNNING
2024-07-09 16:04:18,164 Sleeping for 6s. Reason: RUNNING
2024-07-09 16:04:25,120 Sleeping for 9s. Reason: RUNNING
2024-07-09 16:04:34,817 Sleeping for 10s. Reason: RUNNING
2024-07-09 16:04:45,249 Sleeping for 8s. Reason: RUNNING
2024-07-09 16:05:01,179 Setting max_seq=508, max_extra_seq=2048
2024-07-09 16:13:47,764 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=41 pTM=0.349 ipTM=0.22
2024-07-09 16:19:23,249 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=40.7 pTM=0.35 ipTM=0.268 tol=20.4
2024-07-09 16:24:58,679 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=40.6 pTM=0.353 ipTM=0.236 tol=11.9
2024-07-09 16:30:34,145 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=40.5 pTM=0.354 ipTM=0.308 tol=10
2024-07-09 16:36:09,653 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=41 pTM=0.357 ipTM=0.352 tol=12
2024-07-09 16:41:45,168 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=41 pTM=0.356 ipTM=0.355 tol=8.52
2024-07-09 16:47:20,651 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=40.8 pTM=0.357 ipTM=0.358 tol=8.3
2024-07-09 16:52:56,277 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.2 pTM=0.358 ipTM=0.365 tol=12.8
2024-07-09 16:58:31,944 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=41.2 pTM=0.357 ipTM=0.365 tol=6.9
2024-07-09 17:04:07,649 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=41.3 pTM=0.356 ipTM=0.364 tol=14.1
2024-07-09 17:09:43,297 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=41.2 pTM=0.357 ipTM=0.367 tol=13.4
2024-07-09 17:15:18,858 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41.3 pTM=0.354 ipTM=0.365 tol=11.5
2024-07-09 17:20:54,476 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.4 pTM=0.357 ipTM=0.37 tol=10.1
2024-07-09 17:26:29,930 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=41.1 pTM=0.356 ipTM=0.365 tol=11.9
2024-07-09 17:32:05,497 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=41.2 pTM=0.356 ipTM=0.364 tol=7.87
2024-07-09 17:37:41,119 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=41.4 pTM=0.356 ipTM=0.368 tol=5.74
2024-07-09 17:43:16,673 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=40.9 pTM=0.357 ipTM=0.364 tol=5.84
2024-07-09 17:48:52,167 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=40.8 pTM=0.356 ipTM=0.363 tol=5.08
2024-07-09 17:54:27,695 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=41.1 pTM=0.355 ipTM=0.361 tol=5.82
2024-07-09 18:00:03,209 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=41.1 pTM=0.357 ipTM=0.368 tol=5.54
2024-07-09 18:05:38,758 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=41.4 pTM=0.358 ipTM=0.367 tol=13
2024-07-09 18:11:14,278 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=41.2 pTM=0.357 ipTM=0.368 tol=10.3
2024-07-09 18:16:49,805 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=41.4 pTM=0.355 ipTM=0.364 tol=6.94
2024-07-09 18:22:25,282 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=41.3 pTM=0.354 ipTM=0.359 tol=6.9
2024-07-09 18:28:00,749 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=41.6 pTM=0.357 ipTM=0.365 tol=5.18
2024-07-09 18:33:36,307 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=41.4 pTM=0.355 ipTM=0.365 tol=11.4
2024-07-09 18:39:11,814 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=41.4 pTM=0.355 ipTM=0.367 tol=8.62
2024-07-09 18:44:47,393 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=41.6 pTM=0.353 ipTM=0.364 tol=6.37
2024-07-09 18:50:22,957 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=41.5 pTM=0.354 ipTM=0.363 tol=4.97
2024-07-09 18:55:58,492 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=41.5 pTM=0.356 ipTM=0.365 tol=4.78
2024-07-09 19:01:34,047 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=41.6 pTM=0.357 ipTM=0.363 tol=6.67
2024-07-09 19:01:34,050 alphafold2_multimer_v3_model_1_seed_000 took 10587.7s (30 recycles)
2024-07-09 19:07:14,014 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=41.5 pTM=0.36 ipTM=0.224
2024-07-09 19:12:50,348 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=41.7 pTM=0.349 ipTM=0.211 tol=31.1
2024-07-09 19:18:26,396 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.8 pTM=0.354 ipTM=0.212 tol=18.3
2024-07-09 19:24:02,478 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=42.2 pTM=0.354 ipTM=0.211 tol=15
2024-07-09 19:29:38,631 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=42.7 pTM=0.353 ipTM=0.212 tol=15.8
2024-07-09 19:35:14,814 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=42.6 pTM=0.353 ipTM=0.212 tol=7.85
2024-07-09 19:40:50,982 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=42.3 pTM=0.353 ipTM=0.212 tol=7.96
2024-07-09 19:46:27,186 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=42.5 pTM=0.354 ipTM=0.211 tol=14.2
2024-07-09 19:52:03,314 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42.3 pTM=0.353 ipTM=0.215 tol=10.6
2024-07-09 19:57:39,349 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=42.6 pTM=0.353 ipTM=0.214 tol=5.96
2024-07-09 20:03:15,467 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=42.4 pTM=0.353 ipTM=0.213 tol=7.9
2024-07-09 20:08:51,630 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=42.4 pTM=0.352 ipTM=0.214 tol=8.99
2024-07-09 20:14:27,885 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=42.5 pTM=0.351 ipTM=0.215 tol=10
2024-07-09 20:20:03,940 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=42.4 pTM=0.352 ipTM=0.216 tol=6.75
2024-07-09 20:25:40,047 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=42.7 pTM=0.351 ipTM=0.217 tol=6.31
2024-07-09 20:31:16,247 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=42.8 pTM=0.351 ipTM=0.216 tol=5.75
2024-07-09 20:36:52,327 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=42.7 pTM=0.351 ipTM=0.215 tol=9.77
2024-07-09 20:42:28,351 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=42.6 pTM=0.35 ipTM=0.214 tol=7.12
2024-07-09 20:48:04,569 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=42.9 pTM=0.349 ipTM=0.213 tol=6.82
2024-07-09 20:53:40,764 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=43.2 pTM=0.351 ipTM=0.214 tol=10.3
2024-07-09 20:59:16,974 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=43.1 pTM=0.35 ipTM=0.214 tol=12
2024-07-09 21:04:53,096 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=42.7 pTM=0.352 ipTM=0.215 tol=7.47
2024-07-09 21:10:29,347 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=43.2 pTM=0.352 ipTM=0.215 tol=7.58
2024-07-09 21:16:05,624 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=43.2 pTM=0.35 ipTM=0.215 tol=6.92
2024-07-09 21:21:41,845 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=43.5 pTM=0.351 ipTM=0.216 tol=5.2
2024-07-09 21:27:17,989 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=43.4 pTM=0.35 ipTM=0.216 tol=8.6
2024-07-09 21:32:54,000 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43.4 pTM=0.35 ipTM=0.216 tol=8.63
2024-07-09 21:38:30,123 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=43.6 pTM=0.35 ipTM=0.214 tol=6.21
2024-07-09 21:44:06,246 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=43.5 pTM=0.35 ipTM=0.215 tol=5.57
2024-07-09 21:49:42,395 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.5 pTM=0.35 ipTM=0.214 tol=6.12
2024-07-09 21:55:18,530 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=43.5 pTM=0.349 ipTM=0.213 tol=8.98
2024-07-09 21:55:18,534 alphafold2_multimer_v3_model_2_seed_000 took 10420.7s (30 recycles)
2024-07-09 22:00:58,797 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=39.4 pTM=0.347 ipTM=0.215
2024-07-09 22:06:35,681 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=39.5 pTM=0.347 ipTM=0.23 tol=28.1
2024-07-09 22:12:12,595 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=40.3 pTM=0.35 ipTM=0.242 tol=16.8
2024-07-09 22:17:49,385 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.1 pTM=0.349 ipTM=0.25 tol=14.8
2024-07-09 22:23:25,965 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=42.4 pTM=0.365 ipTM=0.335 tol=10.7
2024-07-09 22:29:02,516 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43.2 pTM=0.372 ipTM=0.381 tol=12.2
2024-07-09 22:34:39,089 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.1 pTM=0.375 ipTM=0.393 tol=10.1
2024-07-09 22:40:15,603 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=43.6 pTM=0.377 ipTM=0.395 tol=13.3
2024-07-09 22:45:52,278 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=43.2 pTM=0.376 ipTM=0.399 tol=11.3
2024-07-09 22:51:28,764 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=42.3 pTM=0.375 ipTM=0.401 tol=12.8
2024-07-09 22:57:05,272 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=42.7 pTM=0.377 ipTM=0.404 tol=9.7
2024-07-09 23:02:41,650 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=42.8 pTM=0.379 ipTM=0.404 tol=13.2
2024-07-09 23:08:18,091 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=44.2 pTM=0.379 ipTM=0.404 tol=9.41
2024-07-09 23:13:54,458 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=43.4 pTM=0.378 ipTM=0.407 tol=7.97
2024-07-09 23:19:30,863 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=42.8 pTM=0.377 ipTM=0.403 tol=7.67
2024-07-09 23:25:07,303 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=43.2 pTM=0.378 ipTM=0.402 tol=7.84
2024-07-09 23:30:43,638 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=44.1 pTM=0.381 ipTM=0.405 tol=7.24
2024-07-09 23:36:20,045 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=43.4 pTM=0.38 ipTM=0.406 tol=9.42
2024-07-09 23:41:56,407 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=43.2 pTM=0.38 ipTM=0.411 tol=7.58
2024-07-09 23:47:32,851 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=43.9 pTM=0.38 ipTM=0.408 tol=11.1
2024-07-09 23:53:09,269 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44 pTM=0.38 ipTM=0.407 tol=9.05
2024-07-09 23:58:45,693 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=43.2 pTM=0.381 ipTM=0.41 tol=9.84
2024-07-10 00:04:22,156 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=42.6 pTM=0.379 ipTM=0.41 tol=9.22
2024-07-10 00:09:58,553 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=43.9 pTM=0.379 ipTM=0.402 tol=13.6
2024-07-10 00:15:34,758 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=43.3 pTM=0.381 ipTM=0.407 tol=14.5
2024-07-10 00:21:11,188 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.9 pTM=0.38 ipTM=0.409 tol=10.6
2024-07-10 00:26:47,608 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=43.2 pTM=0.381 ipTM=0.413 tol=7.86
2024-07-10 00:32:23,888 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=43.5 pTM=0.381 ipTM=0.41 tol=17.8
2024-07-10 00:38:00,293 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=42.6 pTM=0.381 ipTM=0.41 tol=15.5
2024-07-10 00:43:36,598 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.9 pTM=0.382 ipTM=0.409 tol=8.59
2024-07-10 00:49:12,790 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=43 pTM=0.384 ipTM=0.406 tol=15
2024-07-10 00:49:12,794 alphafold2_multimer_v3_model_3_seed_000 took 10430.5s (30 recycles)
2024-07-10 00:54:53,653 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=39.2 pTM=0.365 ipTM=0.387
2024-07-10 01:00:31,058 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=38.6 pTM=0.353 ipTM=0.255 tol=28.3
2024-07-10 01:06:08,312 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=39.8 pTM=0.354 ipTM=0.263 tol=16.2
2024-07-10 01:11:45,371 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=39.7 pTM=0.354 ipTM=0.257 tol=10.6
2024-07-10 01:17:22,534 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=39.2 pTM=0.353 ipTM=0.266 tol=16.1
2024-07-10 01:22:59,718 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=39.9 pTM=0.35 ipTM=0.246 tol=11.9
2024-07-10 01:28:36,997 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=39.3 pTM=0.352 ipTM=0.259 tol=13.6
2024-07-10 01:34:14,096 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=39.9 pTM=0.35 ipTM=0.243 tol=16.9
2024-07-10 01:39:51,362 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=39.3 pTM=0.35 ipTM=0.258 tol=15.7
2024-07-10 01:45:28,563 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=39.8 pTM=0.348 ipTM=0.244 tol=15.4
2024-07-10 01:51:05,988 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=39.6 pTM=0.351 ipTM=0.263 tol=13.2
2024-07-10 01:56:43,345 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=39.5 pTM=0.348 ipTM=0.24 tol=14.6
2024-07-10 02:02:20,721 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=39.7 pTM=0.349 ipTM=0.251 tol=12.4
2024-07-10 02:07:58,005 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=39.8 pTM=0.347 ipTM=0.237 tol=20.6
2024-07-10 02:13:35,429 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=39.8 pTM=0.349 ipTM=0.249 tol=20.5
2024-07-10 02:19:12,580 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=40.1 pTM=0.348 ipTM=0.236 tol=16.7
2024-07-10 02:24:50,020 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=40 pTM=0.35 ipTM=0.253 tol=18
2024-07-10 02:30:27,107 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=40.2 pTM=0.35 ipTM=0.243 tol=21.2
2024-07-10 02:36:04,287 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=40.2 pTM=0.35 ipTM=0.254 tol=16.9
2024-07-10 02:41:41,277 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=40.5 pTM=0.35 ipTM=0.238 tol=15
2024-07-10 02:47:18,541 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=40.2 pTM=0.35 ipTM=0.255 tol=18.1
2024-07-10 02:52:55,699 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=40.6 pTM=0.35 ipTM=0.24 tol=18
2024-07-10 02:58:33,063 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=40.3 pTM=0.349 ipTM=0.251 tol=16.6
2024-07-10 03:04:10,308 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=40.2 pTM=0.347 ipTM=0.234 tol=18.6
2024-07-10 03:09:47,645 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=40.1 pTM=0.348 ipTM=0.247 tol=14.6
2024-07-10 03:15:24,876 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=40.2 pTM=0.348 ipTM=0.239 tol=17.8
2024-07-10 03:21:02,315 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=40.2 pTM=0.348 ipTM=0.251 tol=14.1
2024-07-10 03:26:39,482 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=40.1 pTM=0.348 ipTM=0.235 tol=14.2
2024-07-10 03:32:16,895 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=40 pTM=0.348 ipTM=0.25 tol=16.8
2024-07-10 03:37:54,007 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=39.9 pTM=0.348 ipTM=0.233 tol=17.4
2024-07-10 03:43:31,305 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=40 pTM=0.349 ipTM=0.25 tol=15.8
2024-07-10 03:43:31,308 alphafold2_multimer_v3_model_4_seed_000 took 10454.7s (30 recycles)
2024-07-10 03:49:11,968 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=40.2 pTM=0.344 ipTM=0.211
2024-07-10 03:54:48,979 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40 pTM=0.345 ipTM=0.214 tol=18.1
2024-07-10 04:00:25,921 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=39.9 pTM=0.35 ipTM=0.229 tol=18.7
2024-07-10 04:06:02,574 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=40.1 pTM=0.357 ipTM=0.288 tol=18
2024-07-10 04:11:39,341 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=40 pTM=0.357 ipTM=0.288 tol=14.1
2024-07-10 04:17:15,646 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=42.5 pTM=0.366 ipTM=0.32 tol=12.6
2024-07-10 04:22:51,712 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.5 pTM=0.374 ipTM=0.339 tol=9.51
2024-07-10 04:28:27,957 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=42.2 pTM=0.365 ipTM=0.319 tol=8.88
2024-07-10 04:34:04,014 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=42.1 pTM=0.368 ipTM=0.321 tol=15.1
2024-07-10 04:39:40,081 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=43.2 pTM=0.365 ipTM=0.312 tol=15.1
2024-07-10 04:45:16,367 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.6 pTM=0.365 ipTM=0.317 tol=12.7
2024-07-10 04:50:52,584 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=42.9 pTM=0.371 ipTM=0.325 tol=12.8
2024-07-10 04:56:28,845 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42.5 pTM=0.364 ipTM=0.299 tol=15.4
2024-07-10 05:02:05,039 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.1 pTM=0.366 ipTM=0.319 tol=15.6
2024-07-10 05:07:41,219 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.9 pTM=0.369 ipTM=0.314 tol=13.9
2024-07-10 05:13:17,430 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42 pTM=0.361 ipTM=0.298 tol=14.2
2024-07-10 05:18:53,570 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.4 pTM=0.362 ipTM=0.297 tol=13.7
2024-07-10 05:24:29,814 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43 pTM=0.364 ipTM=0.304 tol=13.8
2024-07-10 05:30:06,083 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43 pTM=0.364 ipTM=0.302 tol=14.7
2024-07-10 05:35:42,347 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43 pTM=0.364 ipTM=0.305 tol=11.7
2024-07-10 05:41:18,676 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.4 pTM=0.367 ipTM=0.294 tol=14.4
2024-07-10 05:46:55,044 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.8 pTM=0.363 ipTM=0.281 tol=15.3
2024-07-10 05:52:31,361 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.2 pTM=0.359 ipTM=0.27 tol=15.4
2024-07-10 05:58:07,559 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.4 pTM=0.361 ipTM=0.28 tol=13.4
2024-07-10 06:03:43,596 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=43.5 pTM=0.361 ipTM=0.272 tol=11.6
2024-07-10 06:09:19,744 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=44 pTM=0.368 ipTM=0.306 tol=11.1
2024-07-10 06:14:55,809 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45.2 pTM=0.383 ipTM=0.354 tol=14.2
2024-07-10 06:20:32,063 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.5 pTM=0.367 ipTM=0.303 tol=14.6
2024-07-10 06:26:08,286 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=44.1 pTM=0.368 ipTM=0.306 tol=14.3
2024-07-10 06:31:44,431 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.6 pTM=0.371 ipTM=0.323 tol=10.7
2024-07-10 06:37:20,399 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43.9 pTM=0.367 ipTM=0.291 tol=13.5
2024-07-10 06:37:20,402 alphafold2_multimer_v3_model_5_seed_000 took 10425.3s (30 recycles)
2024-07-10 06:37:24,173 reranking models by 'multimer' metric
2024-07-10 06:37:29,035 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 06:46:07,090 Relaxation took 522.9s
2024-07-10 06:46:07,091 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=43 pTM=0.384 ipTM=0.406
2024-07-10 06:55:12,748 Relaxation took 545.7s
2024-07-10 06:55:12,749 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=41.6 pTM=0.357 ipTM=0.363
2024-07-10 07:04:46,253 Relaxation took 573.5s
2024-07-10 07:04:46,253 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43.9 pTM=0.367 ipTM=0.291
2024-07-10 07:20:21,962 Relaxation took 935.7s
2024-07-10 07:20:21,963 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=40 pTM=0.349 ipTM=0.25
2024-07-10 07:31:03,878 Relaxation took 641.9s
2024-07-10 07:31:03,878 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=43.5 pTM=0.349 ipTM=0.213
2024-07-10 07:31:11,811 Done