2024-07-09 17:06:03,390 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 17:06:03,710 Running on GPU
2024-07-09 17:06:07,837 Found 6 citations for tools or databases
2024-07-09 17:06:07,837 Query 1/1: DGKD_EPAS1 (length 2084)
2024-07-09 17:06:08,348 Sleeping for 9s. Reason: PENDING
2024-07-09 17:06:17,770 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:06:27,223 Sleeping for 6s. Reason: RUNNING
2024-07-09 17:06:33,677 Sleeping for 8s. Reason: RUNNING
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2024-07-09 17:07:08,389 Sleeping for 7s. Reason: RUNNING
2024-07-09 17:07:15,815 Sleeping for 7s. Reason: RUNNING
2024-07-09 17:07:23,242 Sleeping for 10s. Reason: RUNNING
2024-07-09 17:07:33,688 Sleeping for 6s. Reason: RUNNING
2024-07-09 17:07:40,118 Sleeping for 10s. Reason: RUNNING
2024-07-09 17:07:50,552 Sleeping for 6s. Reason: RUNNING
2024-07-09 17:07:57,976 Sleeping for 6s. Reason: RUNNING
2024-07-09 17:08:04,440 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:08:14,148 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:08:23,582 Sleeping for 10s. Reason: RUNNING
2024-07-09 17:08:34,314 Sleeping for 8s. Reason: RUNNING
2024-07-09 17:08:42,726 Sleeping for 10s. Reason: RUNNING
2024-07-09 17:08:53,139 Sleeping for 7s. Reason: RUNNING
2024-07-09 17:09:00,581 Sleeping for 10s. Reason: RUNNING
2024-07-09 17:09:11,313 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:09:21,202 Sleeping for 10s. Reason: RUNNING
2024-07-09 17:09:31,655 Sleeping for 7s. Reason: RUNNING
2024-07-09 17:09:39,729 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:09:49,152 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:09:58,571 Sleeping for 8s. Reason: RUNNING
2024-07-09 17:10:31,581 Sleeping for 9s. Reason: PENDING
2024-07-09 17:10:41,004 Sleeping for 6s. Reason: RUNNING
2024-07-09 17:10:47,428 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:10:56,854 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:11:06,294 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:11:15,715 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:11:25,615 Sleeping for 6s. Reason: RUNNING
2024-07-09 17:11:32,529 Sleeping for 8s. Reason: RUNNING
2024-07-09 17:11:40,968 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:11:50,391 Sleeping for 7s. Reason: RUNNING
2024-07-09 17:11:57,803 Sleeping for 7s. Reason: RUNNING
2024-07-09 17:12:05,391 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:12:15,320 Sleeping for 10s. Reason: RUNNING
2024-07-09 17:12:25,751 Sleeping for 7s. Reason: RUNNING
2024-07-09 17:12:34,128 Sleeping for 8s. Reason: RUNNING
2024-07-09 17:12:42,570 Sleeping for 7s. Reason: RUNNING
2024-07-09 17:12:49,983 Sleeping for 10s. Reason: RUNNING
2024-07-09 17:13:00,435 Sleeping for 8s. Reason: RUNNING
2024-07-09 17:13:08,854 Sleeping for 9s. Reason: RUNNING
2024-07-09 17:13:18,281 Sleeping for 7s. Reason: RUNNING
2024-07-09 17:13:25,712 Sleeping for 8s. Reason: RUNNING
2024-07-09 17:13:41,597 Setting max_seq=508, max_extra_seq=2048
2024-07-09 17:19:01,499 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49 pTM=0.396 ipTM=0.214
2024-07-09 17:21:57,832 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.4 pTM=0.399 ipTM=0.211 tol=19.1
2024-07-09 17:24:54,171 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.9 pTM=0.397 ipTM=0.215 tol=10.3
2024-07-09 17:27:50,486 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51 pTM=0.402 ipTM=0.23 tol=7.11
2024-07-09 17:30:46,804 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.4 pTM=0.402 ipTM=0.232 tol=6.06
2024-07-09 17:33:43,094 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.3 pTM=0.401 ipTM=0.222 tol=3.42
2024-07-09 17:36:39,355 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=51.2 pTM=0.401 ipTM=0.227 tol=4.93
2024-07-09 17:39:35,619 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51.2 pTM=0.401 ipTM=0.228 tol=4.93
2024-07-09 17:42:31,888 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51.5 pTM=0.402 ipTM=0.227 tol=5.87
2024-07-09 17:45:28,166 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51.6 pTM=0.401 ipTM=0.225 tol=3.83
2024-07-09 17:48:24,439 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.2 pTM=0.399 ipTM=0.222 tol=3.37
2024-07-09 17:51:20,717 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.5 pTM=0.4 ipTM=0.221 tol=3.4
2024-07-09 17:54:16,962 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.5 pTM=0.399 ipTM=0.219 tol=2.44
2024-07-09 17:57:13,219 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.7 pTM=0.4 ipTM=0.226 tol=4.16
2024-07-09 18:00:09,480 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.2 pTM=0.399 ipTM=0.224 tol=5.7
2024-07-09 18:03:05,809 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.5 pTM=0.399 ipTM=0.222 tol=2.74
2024-07-09 18:06:02,053 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.6 pTM=0.399 ipTM=0.219 tol=5.45
2024-07-09 18:08:58,312 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.6 pTM=0.399 ipTM=0.221 tol=3.24
2024-07-09 18:11:54,475 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.4 pTM=0.399 ipTM=0.222 tol=2.75
2024-07-09 18:14:50,702 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.7 pTM=0.4 ipTM=0.218 tol=3.48
2024-07-09 18:17:46,930 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51.3 pTM=0.398 ipTM=0.216 tol=4.29
2024-07-09 18:20:43,167 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51.8 pTM=0.399 ipTM=0.216 tol=2.51
2024-07-09 18:23:39,458 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.4 pTM=0.397 ipTM=0.216 tol=2.71
2024-07-09 18:26:35,773 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.7 pTM=0.4 ipTM=0.221 tol=5.71
2024-07-09 18:29:32,058 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.6 pTM=0.399 ipTM=0.224 tol=5.95
2024-07-09 18:32:28,378 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=51.6 pTM=0.399 ipTM=0.226 tol=2.15
2024-07-09 18:35:24,647 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.5 pTM=0.4 ipTM=0.225 tol=3.15
2024-07-09 18:38:20,984 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.7 pTM=0.4 ipTM=0.226 tol=2.3
2024-07-09 18:41:17,307 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.4 pTM=0.399 ipTM=0.224 tol=2.09
2024-07-09 18:44:13,567 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.7 pTM=0.402 ipTM=0.227 tol=2.22
2024-07-09 18:47:09,759 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51.5 pTM=0.399 ipTM=0.223 tol=5.23
2024-07-09 18:47:09,761 alphafold2_multimer_v3_model_1_seed_000 took 5602.9s (30 recycles)
2024-07-09 18:50:08,460 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.2 pTM=0.415 ipTM=0.219
2024-07-09 18:53:04,789 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.9 pTM=0.421 ipTM=0.226 tol=13.4
2024-07-09 18:56:01,134 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.9 pTM=0.419 ipTM=0.229 tol=7.34
2024-07-09 18:58:57,536 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53 pTM=0.416 ipTM=0.228 tol=11.7
2024-07-09 19:01:53,984 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.4 pTM=0.417 ipTM=0.223 tol=11.2
2024-07-09 19:04:50,461 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.3 pTM=0.417 ipTM=0.229 tol=5.66
2024-07-09 19:07:46,957 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.1 pTM=0.414 ipTM=0.221 tol=4.53
2024-07-09 19:10:43,436 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.2 pTM=0.414 ipTM=0.222 tol=5.69
2024-07-09 19:13:39,945 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.3 pTM=0.414 ipTM=0.216 tol=3.72
2024-07-09 19:16:36,461 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.3 pTM=0.413 ipTM=0.216 tol=3.06
2024-07-09 19:19:32,922 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.2 pTM=0.415 ipTM=0.218 tol=2.95
2024-07-09 19:22:29,398 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.3 pTM=0.414 ipTM=0.218 tol=3.55
2024-07-09 19:25:25,851 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.3 pTM=0.414 ipTM=0.218 tol=3.68
2024-07-09 19:28:22,349 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.3 pTM=0.413 ipTM=0.217 tol=2.65
2024-07-09 19:31:18,877 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.3 pTM=0.414 ipTM=0.218 tol=2.27
2024-07-09 19:34:15,375 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.2 pTM=0.413 ipTM=0.217 tol=2.36
2024-07-09 19:37:11,825 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.2 pTM=0.413 ipTM=0.22 tol=2.17
2024-07-09 19:40:08,275 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54 pTM=0.411 ipTM=0.215 tol=2.22
2024-07-09 19:43:04,725 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.4 pTM=0.413 ipTM=0.212 tol=4.37
2024-07-09 19:46:01,184 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.3 pTM=0.413 ipTM=0.214 tol=4.42
2024-07-09 19:48:57,648 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.2 pTM=0.412 ipTM=0.216 tol=3.02
2024-07-09 19:51:54,155 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.6 pTM=0.414 ipTM=0.218 tol=2.7
2024-07-09 19:54:50,683 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.6 pTM=0.414 ipTM=0.218 tol=3.71
2024-07-09 19:57:47,189 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.5 pTM=0.415 ipTM=0.214 tol=2.65
2024-07-09 20:00:43,705 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.3 pTM=0.414 ipTM=0.218 tol=1.92
2024-07-09 20:03:40,161 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.4 pTM=0.415 ipTM=0.216 tol=1.57
2024-07-09 20:06:36,561 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.4 pTM=0.414 ipTM=0.218 tol=1.99
2024-07-09 20:09:32,969 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.4 pTM=0.415 ipTM=0.212 tol=1.58
2024-07-09 20:12:29,398 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.3 pTM=0.415 ipTM=0.214 tol=1.38
2024-07-09 20:15:25,883 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.5 pTM=0.416 ipTM=0.215 tol=1.79
2024-07-09 20:18:22,368 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.3 pTM=0.415 ipTM=0.214 tol=4.77
2024-07-09 20:18:22,370 alphafold2_multimer_v3_model_2_seed_000 took 5470.1s (30 recycles)
2024-07-09 20:21:21,779 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.4 pTM=0.392 ipTM=0.203
2024-07-09 20:24:18,540 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.3 pTM=0.406 ipTM=0.194 tol=24.9
2024-07-09 20:27:15,310 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52 pTM=0.409 ipTM=0.196 tol=22.2
2024-07-09 20:30:12,109 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.2 pTM=0.409 ipTM=0.189 tol=11.4
2024-07-09 20:33:08,868 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.4 pTM=0.414 ipTM=0.192 tol=9.77
2024-07-09 20:36:05,602 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.9 pTM=0.412 ipTM=0.187 tol=11.4
2024-07-09 20:39:02,275 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.7 pTM=0.413 ipTM=0.188 tol=8.63
2024-07-09 20:41:58,967 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.9 pTM=0.412 ipTM=0.187 tol=6.99
2024-07-09 20:44:55,658 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.8 pTM=0.413 ipTM=0.188 tol=7.5
2024-07-09 20:47:52,354 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53 pTM=0.413 ipTM=0.187 tol=7.02
2024-07-09 20:50:48,982 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.7 pTM=0.41 ipTM=0.186 tol=9.66
2024-07-09 20:53:45,623 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.4 pTM=0.406 ipTM=0.194 tol=9.61
2024-07-09 20:56:42,299 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.5 pTM=0.408 ipTM=0.186 tol=6.89
2024-07-09 20:59:38,970 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53 pTM=0.408 ipTM=0.186 tol=6.79
2024-07-09 21:02:35,648 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.8 pTM=0.41 ipTM=0.188 tol=5.26
2024-07-09 21:05:32,314 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.1 pTM=0.41 ipTM=0.189 tol=4.98
2024-07-09 21:08:29,044 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.2 pTM=0.41 ipTM=0.19 tol=5.37
2024-07-09 21:11:25,678 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.2 pTM=0.41 ipTM=0.191 tol=5.18
2024-07-09 21:14:22,287 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.4 pTM=0.412 ipTM=0.195 tol=5.38
2024-07-09 21:17:18,957 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.6 pTM=0.41 ipTM=0.19 tol=6.87
2024-07-09 21:20:15,587 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.5 pTM=0.413 ipTM=0.194 tol=7.3
2024-07-09 21:23:12,213 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.5 pTM=0.411 ipTM=0.199 tol=7.21
2024-07-09 21:26:08,831 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.5 pTM=0.412 ipTM=0.202 tol=5.19
2024-07-09 21:29:05,376 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.6 pTM=0.413 ipTM=0.209 tol=7.39
2024-07-09 21:32:01,965 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.7 pTM=0.412 ipTM=0.22 tol=6.57
2024-07-09 21:34:58,541 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.8 pTM=0.411 ipTM=0.219 tol=6.1
2024-07-09 21:37:55,056 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.8 pTM=0.411 ipTM=0.218 tol=6.65
2024-07-09 21:40:51,598 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.9 pTM=0.41 ipTM=0.219 tol=4.49
2024-07-09 21:43:48,163 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.8 pTM=0.41 ipTM=0.217 tol=5.15
2024-07-09 21:46:44,806 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.9 pTM=0.412 ipTM=0.219 tol=5.17
2024-07-09 21:49:41,319 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.7 pTM=0.411 ipTM=0.219 tol=4.57
2024-07-09 21:49:41,321 alphafold2_multimer_v3_model_3_seed_000 took 5476.5s (30 recycles)
2024-07-09 21:52:40,555 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.6 pTM=0.424 ipTM=0.328
2024-07-09 21:55:37,656 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.8 pTM=0.4 ipTM=0.194 tol=17.9
2024-07-09 21:58:34,833 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.8 pTM=0.401 ipTM=0.19 tol=16.1
2024-07-09 22:01:31,940 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51.6 pTM=0.403 ipTM=0.192 tol=15.8
2024-07-09 22:04:29,001 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.9 pTM=0.406 ipTM=0.203 tol=11.6
2024-07-09 22:07:26,055 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.1 pTM=0.406 ipTM=0.197 tol=12
2024-07-09 22:10:23,090 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52 pTM=0.409 ipTM=0.196 tol=9.65
2024-07-09 22:13:20,016 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.3 pTM=0.409 ipTM=0.198 tol=5.95
2024-07-09 22:16:16,943 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=51.8 pTM=0.411 ipTM=0.202 tol=5.77
2024-07-09 22:19:13,855 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.2 pTM=0.414 ipTM=0.202 tol=7
2024-07-09 22:22:10,790 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52 pTM=0.415 ipTM=0.202 tol=5.86
2024-07-09 22:25:07,756 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52 pTM=0.415 ipTM=0.203 tol=4.93
2024-07-09 22:28:04,724 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.9 pTM=0.412 ipTM=0.199 tol=5.09
2024-07-09 22:31:01,647 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.2 pTM=0.414 ipTM=0.205 tol=3.26
2024-07-09 22:33:58,581 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.8 pTM=0.414 ipTM=0.203 tol=4.34
2024-07-09 22:36:55,512 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52 pTM=0.413 ipTM=0.205 tol=4.47
2024-07-09 22:39:52,466 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.8 pTM=0.411 ipTM=0.203 tol=3.6
2024-07-09 22:42:49,482 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52 pTM=0.411 ipTM=0.208 tol=3.72
2024-07-09 22:45:46,521 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51.7 pTM=0.41 ipTM=0.206 tol=3.46
2024-07-09 22:48:43,480 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.2 pTM=0.412 ipTM=0.203 tol=3.54
2024-07-09 22:51:40,432 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=51.8 pTM=0.409 ipTM=0.199 tol=3.3
2024-07-09 22:54:37,423 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.1 pTM=0.41 ipTM=0.201 tol=3.97
2024-07-09 22:57:34,354 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.8 pTM=0.409 ipTM=0.2 tol=4.13
2024-07-09 23:00:31,293 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.1 pTM=0.411 ipTM=0.205 tol=3.09
2024-07-09 23:03:28,204 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.8 pTM=0.412 ipTM=0.203 tol=2.51
2024-07-09 23:06:25,139 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52 pTM=0.411 ipTM=0.206 tol=7
2024-07-09 23:09:22,112 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=51.9 pTM=0.411 ipTM=0.203 tol=5.64
2024-07-09 23:12:19,086 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.1 pTM=0.412 ipTM=0.205 tol=3.55
2024-07-09 23:15:15,989 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52 pTM=0.411 ipTM=0.204 tol=4.62
2024-07-09 23:18:12,995 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52 pTM=0.411 ipTM=0.204 tol=4.3
2024-07-09 23:21:09,850 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51.8 pTM=0.411 ipTM=0.203 tol=4.97
2024-07-09 23:21:09,853 alphafold2_multimer_v3_model_4_seed_000 took 5486.0s (30 recycles)
2024-07-09 23:24:09,224 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.4 pTM=0.4 ipTM=0.196
2024-07-09 23:27:06,037 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.9 pTM=0.414 ipTM=0.211 tol=16.8
2024-07-09 23:30:02,883 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.5 pTM=0.419 ipTM=0.22 tol=15
2024-07-09 23:32:59,730 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.8 pTM=0.422 ipTM=0.23 tol=8.55
2024-07-09 23:35:56,469 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.3 pTM=0.425 ipTM=0.234 tol=5.78
2024-07-09 23:38:53,147 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.5 pTM=0.424 ipTM=0.231 tol=6.62
2024-07-09 23:41:49,872 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.3 pTM=0.425 ipTM=0.226 tol=6.51
2024-07-09 23:44:46,582 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.5 pTM=0.425 ipTM=0.223 tol=4.16
2024-07-09 23:47:43,296 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.6 pTM=0.426 ipTM=0.227 tol=3.04
2024-07-09 23:50:39,962 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.5 pTM=0.425 ipTM=0.223 tol=9.36
2024-07-09 23:53:36,643 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.6 pTM=0.426 ipTM=0.219 tol=8.36
2024-07-09 23:56:33,330 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.5 pTM=0.426 ipTM=0.219 tol=7.32
2024-07-09 23:59:29,958 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.5 pTM=0.425 ipTM=0.219 tol=3.75
2024-07-10 00:02:26,592 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.6 pTM=0.427 ipTM=0.223 tol=7.66
2024-07-10 00:05:23,221 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.7 pTM=0.428 ipTM=0.226 tol=9.23
2024-07-10 00:08:19,852 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.6 pTM=0.426 ipTM=0.225 tol=6.79
2024-07-10 00:11:16,537 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.6 pTM=0.427 ipTM=0.225 tol=4.21
2024-07-10 00:14:13,223 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.3 pTM=0.426 ipTM=0.224 tol=7.5
2024-07-10 00:17:09,956 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.6 pTM=0.427 ipTM=0.227 tol=7.98
2024-07-10 00:20:06,647 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.6 pTM=0.427 ipTM=0.223 tol=8.36
2024-07-10 00:23:03,308 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.5 pTM=0.426 ipTM=0.222 tol=7.38
2024-07-10 00:25:59,868 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.8 pTM=0.427 ipTM=0.223 tol=7.5
2024-07-10 00:28:56,467 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.4 pTM=0.426 ipTM=0.22 tol=4.55
2024-07-10 00:31:53,132 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.6 pTM=0.427 ipTM=0.218 tol=4.44
2024-07-10 00:34:49,781 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.6 pTM=0.427 ipTM=0.221 tol=3.82
2024-07-10 00:37:46,427 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.6 pTM=0.426 ipTM=0.22 tol=6.16
2024-07-10 00:40:43,046 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.4 pTM=0.425 ipTM=0.221 tol=6.59
2024-07-10 00:43:39,683 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.4 pTM=0.426 ipTM=0.222 tol=6.61
2024-07-10 00:46:36,272 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.2 pTM=0.427 ipTM=0.228 tol=4.66
2024-07-10 00:49:32,777 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.3 pTM=0.426 ipTM=0.226 tol=8.68
2024-07-10 00:52:29,261 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.3 pTM=0.426 ipTM=0.221 tol=7.12
2024-07-10 00:52:29,263 alphafold2_multimer_v3_model_5_seed_000 took 5476.9s (30 recycles)
2024-07-10 00:52:31,767 reranking models by 'multimer' metric
2024-07-10 00:52:34,128 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 00:58:00,047 Relaxation took 328.3s
2024-07-10 00:58:00,047 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.3 pTM=0.426 ipTM=0.221
2024-07-10 01:02:58,726 Relaxation took 298.7s
2024-07-10 01:02:58,726 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51.5 pTM=0.399 ipTM=0.223
2024-07-10 01:10:39,222 Relaxation took 460.5s
2024-07-10 01:10:39,222 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.7 pTM=0.411 ipTM=0.219
2024-07-10 01:17:03,946 Relaxation took 384.7s
2024-07-10 01:17:03,946 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.3 pTM=0.415 ipTM=0.214
2024-07-10 01:22:50,811 Relaxation took 346.9s
2024-07-10 01:22:50,811 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51.8 pTM=0.411 ipTM=0.203
2024-07-10 01:22:56,252 Done