2024-07-09 18:17:19,989 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 18:17:20,312 Running on GPU
2024-07-09 18:17:23,979 Found 6 citations for tools or databases
2024-07-09 18:17:23,979 Query 1/1: DJC18_PANK4 (length 1131)
2024-07-09 18:17:24,423 Sleeping for 9s. Reason: PENDING
2024-07-09 18:17:34,368 Sleeping for 9s. Reason: RUNNING
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2024-07-09 18:18:36,968 Sleeping for 5s. Reason: RUNNING
2024-07-09 18:18:42,391 Sleeping for 7s. Reason: RUNNING
2024-07-09 18:18:51,153 Sleeping for 9s. Reason: RUNNING
2024-07-09 18:19:01,749 Sleeping for 5s. Reason: RUNNING
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2024-07-09 18:19:14,861 Sleeping for 9s. Reason: RUNNING
2024-07-09 18:19:24,789 Sleeping for 7s. Reason: RUNNING
2024-07-09 18:19:32,211 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:19:38,639 Sleeping for 7s. Reason: RUNNING
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2024-07-09 18:20:04,888 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:20:11,311 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:20:45,077 Sleeping for 5s. Reason: PENDING
2024-07-09 18:20:51,016 Sleeping for 10s. Reason: RUNNING
2024-07-09 18:21:01,434 Sleeping for 10s. Reason: RUNNING
2024-07-09 18:21:11,885 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:21:18,295 Sleeping for 9s. Reason: RUNNING
2024-07-09 18:21:27,711 Sleeping for 8s. Reason: RUNNING
2024-07-09 18:21:36,120 Sleeping for 10s. Reason: RUNNING
2024-07-09 18:21:46,560 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:21:53,000 Sleeping for 5s. Reason: RUNNING
2024-07-09 18:21:58,416 Sleeping for 8s. Reason: RUNNING
2024-07-09 18:22:07,220 Sleeping for 9s. Reason: RUNNING
2024-07-09 18:22:22,474 Setting max_seq=508, max_extra_seq=2048
2024-07-09 18:25:31,834 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73 pTM=0.661 ipTM=0.439
2024-07-09 18:26:00,695 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=73.2 pTM=0.67 ipTM=0.352 tol=14.2
2024-07-09 18:26:29,622 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.6 pTM=0.659 ipTM=0.26 tol=6.31
2024-07-09 18:26:58,625 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.6 pTM=0.648 ipTM=0.235 tol=2.78
2024-07-09 18:27:27,697 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.6 pTM=0.654 ipTM=0.27 tol=2.45
2024-07-09 18:27:56,831 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.4 pTM=0.648 ipTM=0.218 tol=1.93
2024-07-09 18:28:25,999 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.4 pTM=0.646 ipTM=0.168 tol=6.4
2024-07-09 18:28:55,171 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=71.9 pTM=0.645 ipTM=0.169 tol=6.65
2024-07-09 18:29:24,367 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=71.8 pTM=0.643 ipTM=0.172 tol=5.66
2024-07-09 18:29:53,575 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.2 pTM=0.65 ipTM=0.177 tol=2.51
2024-07-09 18:30:22,799 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.5 pTM=0.65 ipTM=0.184 tol=2.54
2024-07-09 18:30:52,028 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.4 pTM=0.65 ipTM=0.18 tol=1.97
2024-07-09 18:31:21,268 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.7 pTM=0.65 ipTM=0.18 tol=1.73
2024-07-09 18:31:50,495 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.5 pTM=0.651 ipTM=0.187 tol=1.28
2024-07-09 18:32:19,728 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.5 pTM=0.646 ipTM=0.175 tol=1.13
2024-07-09 18:32:48,949 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.4 pTM=0.647 ipTM=0.181 tol=1.05
2024-07-09 18:33:18,150 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.4 pTM=0.645 ipTM=0.175 tol=1.1
2024-07-09 18:33:47,354 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.6 pTM=0.648 ipTM=0.18 tol=0.857
2024-07-09 18:34:16,549 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.5 pTM=0.644 ipTM=0.172 tol=1.11
2024-07-09 18:34:45,734 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.3 pTM=0.649 ipTM=0.189 tol=1.25
2024-07-09 18:35:14,919 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.6 pTM=0.649 ipTM=0.178 tol=0.699
2024-07-09 18:35:44,108 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.6 pTM=0.649 ipTM=0.188 tol=0.611
2024-07-09 18:36:13,316 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.4 pTM=0.643 ipTM=0.177 tol=1.08
2024-07-09 18:36:42,531 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.5 pTM=0.646 ipTM=0.178 tol=0.669
2024-07-09 18:37:11,715 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.4 pTM=0.643 ipTM=0.174 tol=1.22
2024-07-09 18:37:40,912 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.6 pTM=0.647 ipTM=0.182 tol=1.53
2024-07-09 18:38:10,144 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.8 pTM=0.65 ipTM=0.174 tol=1.26
2024-07-09 18:38:39,334 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.4 pTM=0.647 ipTM=0.178 tol=0.729
2024-07-09 18:39:08,547 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.4 pTM=0.642 ipTM=0.168 tol=2.04
2024-07-09 18:39:37,742 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.2 pTM=0.646 ipTM=0.188 tol=2.48
2024-07-09 18:40:06,943 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.4 pTM=0.646 ipTM=0.175 tol=1.03
2024-07-09 18:40:06,944 alphafold2_multimer_v3_model_1_seed_000 took 1059.6s (30 recycles)
2024-07-09 18:40:37,052 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=73.8 pTM=0.662 ipTM=0.27
2024-07-09 18:41:06,375 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.4 pTM=0.661 ipTM=0.241 tol=5.16
2024-07-09 18:41:35,680 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.1 pTM=0.655 ipTM=0.239 tol=4.6
2024-07-09 18:42:04,959 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.8 pTM=0.655 ipTM=0.302 tol=5.96
2024-07-09 18:42:34,202 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.9 pTM=0.66 ipTM=0.327 tol=2.53
2024-07-09 18:43:03,452 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.8 pTM=0.655 ipTM=0.312 tol=1.73
2024-07-09 18:43:32,737 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.9 pTM=0.655 ipTM=0.298 tol=1.18
2024-07-09 18:44:02,010 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.6 pTM=0.65 ipTM=0.254 tol=1
2024-07-09 18:44:31,270 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.6 pTM=0.647 ipTM=0.252 tol=1.01
2024-07-09 18:45:00,455 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.6 pTM=0.65 ipTM=0.263 tol=1.2
2024-07-09 18:45:29,608 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.4 pTM=0.649 ipTM=0.241 tol=1.11
2024-07-09 18:45:58,742 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.4 pTM=0.649 ipTM=0.242 tol=1.49
2024-07-09 18:46:27,872 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.2 pTM=0.649 ipTM=0.246 tol=2.09
2024-07-09 18:46:57,002 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.3 pTM=0.646 ipTM=0.237 tol=2.26
2024-07-09 18:47:26,145 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.2 pTM=0.644 ipTM=0.229 tol=0.975
2024-07-09 18:47:55,307 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74 pTM=0.639 ipTM=0.203 tol=1.55
2024-07-09 18:48:24,519 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.9 pTM=0.637 ipTM=0.175 tol=2.77
2024-07-09 18:48:53,718 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.2 pTM=0.64 ipTM=0.198 tol=2.81
2024-07-09 18:49:22,957 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.1 pTM=0.637 ipTM=0.17 tol=3.64
2024-07-09 18:49:52,201 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.1 pTM=0.638 ipTM=0.182 tol=5.01
2024-07-09 18:50:21,478 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.2 pTM=0.637 ipTM=0.154 tol=6.03
2024-07-09 18:50:50,727 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.1 pTM=0.633 ipTM=0.15 tol=4.93
2024-07-09 18:51:19,989 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74 pTM=0.635 ipTM=0.159 tol=4.41
2024-07-09 18:51:49,256 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.1 pTM=0.633 ipTM=0.161 tol=2.76
2024-07-09 18:52:18,494 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.1 pTM=0.637 ipTM=0.173 tol=3.22
2024-07-09 18:52:47,734 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.1 pTM=0.636 ipTM=0.187 tol=3.27
2024-07-09 18:53:16,974 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.1 pTM=0.638 ipTM=0.185 tol=3
2024-07-09 18:53:46,198 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.1 pTM=0.637 ipTM=0.165 tol=3.7
2024-07-09 18:54:15,404 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.9 pTM=0.638 ipTM=0.19 tol=3.07
2024-07-09 18:54:44,632 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74 pTM=0.639 ipTM=0.198 tol=0.985
2024-07-09 18:55:13,848 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.9 pTM=0.637 ipTM=0.183 tol=1.02
2024-07-09 18:55:13,849 alphafold2_multimer_v3_model_2_seed_000 took 906.1s (30 recycles)
2024-07-09 18:55:43,842 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72 pTM=0.639 ipTM=0.157
2024-07-09 18:56:13,137 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.2 pTM=0.648 ipTM=0.148 tol=6.29
2024-07-09 18:56:42,385 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.4 pTM=0.647 ipTM=0.168 tol=8.6
2024-07-09 18:57:11,600 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72 pTM=0.652 ipTM=0.182 tol=3.46
2024-07-09 18:57:40,863 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.2 pTM=0.653 ipTM=0.185 tol=2.03
2024-07-09 18:58:10,044 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.1 pTM=0.651 ipTM=0.198 tol=1.53
2024-07-09 18:58:39,273 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.4 pTM=0.654 ipTM=0.189 tol=1.92
2024-07-09 18:59:08,530 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.2 pTM=0.654 ipTM=0.202 tol=2.3
2024-07-09 18:59:37,767 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.3 pTM=0.655 ipTM=0.2 tol=1.98
2024-07-09 19:00:06,994 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.3 pTM=0.655 ipTM=0.2 tol=1.49
2024-07-09 19:00:36,250 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.4 pTM=0.655 ipTM=0.186 tol=1.67
2024-07-09 19:01:05,499 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.3 pTM=0.654 ipTM=0.179 tol=2.19
2024-07-09 19:01:34,750 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.4 pTM=0.655 ipTM=0.182 tol=1.38
2024-07-09 19:02:03,996 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.4 pTM=0.653 ipTM=0.19 tol=1.52
2024-07-09 19:02:33,217 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.2 pTM=0.65 ipTM=0.181 tol=1.38
2024-07-09 19:03:02,463 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.2 pTM=0.649 ipTM=0.179 tol=1.31
2024-07-09 19:03:31,684 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.2 pTM=0.652 ipTM=0.181 tol=1.02
2024-07-09 19:04:00,941 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72.2 pTM=0.65 ipTM=0.18 tol=1.01
2024-07-09 19:04:30,180 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72.3 pTM=0.652 ipTM=0.181 tol=1.35
2024-07-09 19:04:59,449 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.1 pTM=0.65 ipTM=0.178 tol=0.85
2024-07-09 19:05:28,711 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.3 pTM=0.653 ipTM=0.182 tol=0.971
2024-07-09 19:05:57,986 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.4 pTM=0.652 ipTM=0.178 tol=1.01
2024-07-09 19:06:27,218 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.2 pTM=0.65 ipTM=0.179 tol=0.875
2024-07-09 19:06:56,466 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.2 pTM=0.651 ipTM=0.178 tol=0.92
2024-07-09 19:07:25,675 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.2 pTM=0.65 ipTM=0.178 tol=1.01
2024-07-09 19:07:54,903 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72.2 pTM=0.65 ipTM=0.178 tol=0.907
2024-07-09 19:08:24,168 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.4 pTM=0.653 ipTM=0.18 tol=0.94
2024-07-09 19:08:53,421 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.4 pTM=0.651 ipTM=0.177 tol=0.812
2024-07-09 19:09:22,673 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.3 pTM=0.652 ipTM=0.181 tol=0.784
2024-07-09 19:09:51,901 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.2 pTM=0.65 ipTM=0.179 tol=0.849
2024-07-09 19:10:21,139 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.2 pTM=0.652 ipTM=0.179 tol=1.47
2024-07-09 19:10:21,140 alphafold2_multimer_v3_model_3_seed_000 took 906.5s (30 recycles)
2024-07-09 19:10:51,128 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.8 pTM=0.639 ipTM=0.182
2024-07-09 19:11:20,324 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=70.9 pTM=0.644 ipTM=0.169 tol=10.3
2024-07-09 19:11:49,509 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.1 pTM=0.645 ipTM=0.186 tol=9.52
2024-07-09 19:12:18,690 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.9 pTM=0.649 ipTM=0.186 tol=4.91
2024-07-09 19:12:47,862 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71 pTM=0.651 ipTM=0.195 tol=3.29
2024-07-09 19:13:17,063 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71 pTM=0.652 ipTM=0.184 tol=1.54
2024-07-09 19:13:46,328 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.1 pTM=0.655 ipTM=0.197 tol=1.12
2024-07-09 19:14:15,544 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.1 pTM=0.651 ipTM=0.182 tol=0.945
2024-07-09 19:14:44,753 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71 pTM=0.652 ipTM=0.202 tol=1.1
2024-07-09 19:15:13,976 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.1 pTM=0.654 ipTM=0.182 tol=1.5
2024-07-09 19:15:43,178 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.1 pTM=0.65 ipTM=0.188 tol=1.44
2024-07-09 19:16:12,396 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71 pTM=0.652 ipTM=0.185 tol=1.53
2024-07-09 19:16:41,604 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.2 pTM=0.652 ipTM=0.188 tol=0.95
2024-07-09 19:17:10,834 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.6 pTM=0.65 ipTM=0.185 tol=1.01
2024-07-09 19:17:40,037 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.9 pTM=0.652 ipTM=0.187 tol=1.12
2024-07-09 19:18:09,247 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.8 pTM=0.652 ipTM=0.183 tol=1.02
2024-07-09 19:18:38,429 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.9 pTM=0.654 ipTM=0.182 tol=1.26
2024-07-09 19:19:07,606 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.8 pTM=0.653 ipTM=0.182 tol=1.37
2024-07-09 19:19:36,767 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.6 pTM=0.652 ipTM=0.182 tol=1.33
2024-07-09 19:20:05,959 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.6 pTM=0.652 ipTM=0.181 tol=1.09
2024-07-09 19:20:35,126 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.8 pTM=0.652 ipTM=0.179 tol=1.38
2024-07-09 19:21:04,318 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.8 pTM=0.652 ipTM=0.179 tol=1.3
2024-07-09 19:21:33,523 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.8 pTM=0.653 ipTM=0.181 tol=1.22
2024-07-09 19:22:02,721 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.9 pTM=0.655 ipTM=0.182 tol=0.851
2024-07-09 19:22:31,877 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.8 pTM=0.651 ipTM=0.177 tol=1.39
2024-07-09 19:23:01,054 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.8 pTM=0.653 ipTM=0.183 tol=1.2
2024-07-09 19:23:30,249 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.9 pTM=0.652 ipTM=0.18 tol=0.988
2024-07-09 19:23:59,441 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71 pTM=0.654 ipTM=0.184 tol=1.01
2024-07-09 19:24:28,603 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.8 pTM=0.652 ipTM=0.179 tol=1.24
2024-07-09 19:24:57,773 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.7 pTM=0.652 ipTM=0.183 tol=1.33
2024-07-09 19:25:26,977 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.9 pTM=0.654 ipTM=0.182 tol=1.44
2024-07-09 19:25:26,978 alphafold2_multimer_v3_model_4_seed_000 took 905.1s (30 recycles)
2024-07-09 19:25:56,979 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.5 pTM=0.653 ipTM=0.286
2024-07-09 19:26:26,273 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.6 pTM=0.651 ipTM=0.245 tol=5.98
2024-07-09 19:26:55,521 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.8 pTM=0.632 ipTM=0.168 tol=4.43
2024-07-09 19:27:24,829 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.2 pTM=0.634 ipTM=0.169 tol=8.83
2024-07-09 19:27:54,111 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.1 pTM=0.633 ipTM=0.182 tol=4.53
2024-07-09 19:28:23,375 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.5 pTM=0.634 ipTM=0.171 tol=2.29
2024-07-09 19:28:52,639 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.4 pTM=0.636 ipTM=0.188 tol=2.19
2024-07-09 19:29:21,907 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.5 pTM=0.637 ipTM=0.181 tol=1.77
2024-07-09 19:29:51,169 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.2 pTM=0.635 ipTM=0.186 tol=2.11
2024-07-09 19:30:20,458 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.4 pTM=0.636 ipTM=0.175 tol=1.73
2024-07-09 19:30:49,699 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.3 pTM=0.635 ipTM=0.176 tol=1.65
2024-07-09 19:31:18,967 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.5 pTM=0.636 ipTM=0.172 tol=1.38
2024-07-09 19:31:48,249 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.3 pTM=0.636 ipTM=0.174 tol=1.5
2024-07-09 19:32:17,534 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.4 pTM=0.637 ipTM=0.173 tol=1.09
2024-07-09 19:32:46,784 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.1 pTM=0.634 ipTM=0.179 tol=1.17
2024-07-09 19:33:16,025 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.2 pTM=0.636 ipTM=0.172 tol=1.04
2024-07-09 19:33:45,283 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.1 pTM=0.637 ipTM=0.203 tol=1.63
2024-07-09 19:34:14,504 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.3 pTM=0.638 ipTM=0.168 tol=1.06
2024-07-09 19:34:43,708 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72 pTM=0.636 ipTM=0.177 tol=0.748
2024-07-09 19:35:12,881 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.1 pTM=0.637 ipTM=0.181 tol=1.53
2024-07-09 19:35:42,055 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.2 pTM=0.638 ipTM=0.17 tol=1.74
2024-07-09 19:36:11,214 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.4 pTM=0.638 ipTM=0.176 tol=1.04
2024-07-09 19:36:40,378 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.1 pTM=0.636 ipTM=0.163 tol=0.935
2024-07-09 19:37:09,544 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.2 pTM=0.639 ipTM=0.17 tol=0.798
2024-07-09 19:37:38,706 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72 pTM=0.639 ipTM=0.172 tol=0.69
2024-07-09 19:38:07,891 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.1 pTM=0.637 ipTM=0.175 tol=0.917
2024-07-09 19:38:37,061 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.1 pTM=0.639 ipTM=0.204 tol=0.953
2024-07-09 19:39:06,255 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.3 pTM=0.639 ipTM=0.171 tol=1.83
2024-07-09 19:39:35,450 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.1 pTM=0.639 ipTM=0.183 tol=1.82
2024-07-09 19:40:04,621 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.1 pTM=0.638 ipTM=0.173 tol=1.01
2024-07-09 19:40:33,817 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.1 pTM=0.639 ipTM=0.197 tol=1.17
2024-07-09 19:40:33,818 alphafold2_multimer_v3_model_5_seed_000 took 906.1s (30 recycles)
2024-07-09 19:40:34,591 reranking models by 'multimer' metric
2024-07-09 19:40:35,887 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 19:42:35,756 Relaxation took 121.2s
2024-07-09 19:42:35,756 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.1 pTM=0.639 ipTM=0.197
2024-07-09 19:44:33,449 Relaxation took 117.7s
2024-07-09 19:44:33,449 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.9 pTM=0.654 ipTM=0.182
2024-07-09 19:50:41,659 Relaxation took 368.2s
2024-07-09 19:50:41,660 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.9 pTM=0.637 ipTM=0.183
2024-07-09 19:52:23,321 Relaxation took 101.7s
2024-07-09 19:52:23,322 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.2 pTM=0.652 ipTM=0.179
2024-07-09 19:53:32,877 Relaxation took 69.6s
2024-07-09 19:53:32,877 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.4 pTM=0.646 ipTM=0.175
2024-07-09 19:53:35,099 Done