2024-07-09 18:44:16,695 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 18:44:17,011 Running on GPU
2024-07-09 18:44:20,700 Found 6 citations for tools or databases
2024-07-09 18:44:20,701 Query 1/1: DLGP3_DLG4 (length 1703)
2024-07-09 18:44:21,180 Sleeping for 8s. Reason: PENDING
2024-07-09 18:44:29,608 Sleeping for 5s. Reason: RUNNING
2024-07-09 18:44:35,057 Sleeping for 5s. Reason: RUNNING
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2024-07-09 18:45:01,372 Sleeping for 6s. Reason: RUNNING
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2024-07-09 18:45:16,281 Sleeping for 5s. Reason: RUNNING
2024-07-09 18:45:21,738 Sleeping for 5s. Reason: RUNNING
2024-07-09 18:45:27,152 Sleeping for 7s. Reason: RUNNING
2024-07-09 18:45:34,568 Sleeping for 7s. Reason: RUNNING
2024-07-09 18:45:42,353 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:45:48,776 Sleeping for 7s. Reason: RUNNING
2024-07-09 18:45:56,201 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:46:02,650 Sleeping for 9s. Reason: RUNNING
2024-07-09 18:46:12,064 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:46:18,676 Sleeping for 8s. Reason: RUNNING
2024-07-09 18:46:27,083 Sleeping for 7s. Reason: RUNNING
2024-07-09 18:46:34,498 Sleeping for 7s. Reason: RUNNING
2024-07-09 18:46:41,971 Sleeping for 10s. Reason: RUNNING
2024-07-09 18:46:52,407 Sleeping for 10s. Reason: RUNNING
2024-07-09 18:47:02,830 Sleeping for 8s. Reason: RUNNING
2024-07-09 18:47:11,312 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:47:17,743 Sleeping for 7s. Reason: RUNNING
2024-07-09 18:47:25,159 Sleeping for 5s. Reason: RUNNING
2024-07-09 18:47:39,027 Sleeping for 5s. Reason: PENDING
2024-07-09 18:47:44,448 Sleeping for 10s. Reason: RUNNING
2024-07-09 18:47:54,885 Sleeping for 7s. Reason: RUNNING
2024-07-09 18:48:02,578 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:48:09,030 Sleeping for 6s. Reason: RUNNING
2024-07-09 18:48:15,461 Sleeping for 8s. Reason: RUNNING
2024-07-09 18:48:23,884 Sleeping for 10s. Reason: RUNNING
2024-07-09 18:48:34,338 Sleeping for 8s. Reason: RUNNING
2024-07-09 18:48:42,752 Sleeping for 9s. Reason: RUNNING
2024-07-09 18:48:52,187 Sleeping for 10s. Reason: RUNNING
2024-07-09 18:49:02,618 Sleeping for 10s. Reason: RUNNING
2024-07-09 18:49:13,552 Sleeping for 7s. Reason: RUNNING
2024-07-09 18:49:20,978 Sleeping for 8s. Reason: RUNNING
2024-07-09 18:49:29,407 Sleeping for 8s. Reason: RUNNING
2024-07-09 18:49:43,797 Setting max_seq=508, max_extra_seq=2048
2024-07-09 18:54:05,525 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=41 pTM=0.32 ipTM=0.298
2024-07-09 18:55:41,534 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=41.3 pTM=0.32 ipTM=0.252 tol=12.5
2024-07-09 18:57:17,801 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=41.4 pTM=0.319 ipTM=0.28 tol=7.78
2024-07-09 18:58:54,124 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=41.2 pTM=0.317 ipTM=0.244 tol=7.01
2024-07-09 19:00:30,536 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=41.2 pTM=0.316 ipTM=0.248 tol=5.79
2024-07-09 19:02:06,981 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=41.2 pTM=0.316 ipTM=0.234 tol=5.06
2024-07-09 19:03:43,322 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=41.2 pTM=0.316 ipTM=0.243 tol=4.76
2024-07-09 19:05:19,708 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.3 pTM=0.316 ipTM=0.237 tol=4.54
2024-07-09 19:06:56,152 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=41.2 pTM=0.315 ipTM=0.234 tol=5.72
2024-07-09 19:08:32,578 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=41.4 pTM=0.316 ipTM=0.237 tol=6.27
2024-07-09 19:10:09,021 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=41.7 pTM=0.316 ipTM=0.242 tol=3.73
2024-07-09 19:11:45,433 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41.7 pTM=0.316 ipTM=0.238 tol=5.62
2024-07-09 19:13:21,808 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.6 pTM=0.315 ipTM=0.235 tol=6.38
2024-07-09 19:14:58,254 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=41.5 pTM=0.316 ipTM=0.231 tol=7.84
2024-07-09 19:16:34,688 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=41.6 pTM=0.315 ipTM=0.235 tol=7.25
2024-07-09 19:18:11,073 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=41.6 pTM=0.315 ipTM=0.234 tol=4.36
2024-07-09 19:19:47,476 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=41.8 pTM=0.316 ipTM=0.237 tol=4.1
2024-07-09 19:21:23,829 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=41.6 pTM=0.316 ipTM=0.236 tol=6.02
2024-07-09 19:23:00,172 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=41.7 pTM=0.315 ipTM=0.231 tol=3.71
2024-07-09 19:24:36,545 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=41.7 pTM=0.316 ipTM=0.234 tol=4.25
2024-07-09 19:26:12,885 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=41.8 pTM=0.316 ipTM=0.235 tol=4.09
2024-07-09 19:27:49,306 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=41.7 pTM=0.316 ipTM=0.24 tol=3.58
2024-07-09 19:29:25,683 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=41.8 pTM=0.315 ipTM=0.245 tol=3.33
2024-07-09 19:31:02,069 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=41.8 pTM=0.317 ipTM=0.241 tol=3.59
2024-07-09 19:32:38,477 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=41.8 pTM=0.316 ipTM=0.24 tol=4.38
2024-07-09 19:34:14,899 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=41.9 pTM=0.316 ipTM=0.237 tol=3.53
2024-07-09 19:35:51,250 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=41.9 pTM=0.316 ipTM=0.245 tol=4.1
2024-07-09 19:37:27,567 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=41.9 pTM=0.316 ipTM=0.238 tol=3.44
2024-07-09 19:39:03,846 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42 pTM=0.317 ipTM=0.241 tol=3.19
2024-07-09 19:40:40,183 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=41.8 pTM=0.316 ipTM=0.239 tol=2.28
2024-07-09 19:42:16,453 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=42 pTM=0.316 ipTM=0.245 tol=2.33
2024-07-09 19:42:16,454 alphafold2_multimer_v3_model_1_seed_000 took 3147.9s (30 recycles)
2024-07-09 19:43:54,354 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=42.8 pTM=0.325 ipTM=0.282
2024-07-09 19:45:30,696 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.2 pTM=0.322 ipTM=0.238 tol=17.7
2024-07-09 19:47:07,083 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.1 pTM=0.323 ipTM=0.249 tol=12
2024-07-09 19:48:43,482 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=44.3 pTM=0.323 ipTM=0.234 tol=10.5
2024-07-09 19:50:19,904 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=44.3 pTM=0.322 ipTM=0.23 tol=11.3
2024-07-09 19:51:56,377 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=44.3 pTM=0.322 ipTM=0.238 tol=7.66
2024-07-09 19:53:32,901 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=44.3 pTM=0.321 ipTM=0.231 tol=7.95
2024-07-09 19:55:09,459 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=44.4 pTM=0.321 ipTM=0.231 tol=8.94
2024-07-09 19:56:46,008 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=44.5 pTM=0.321 ipTM=0.237 tol=7.58
2024-07-09 19:58:22,548 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.4 pTM=0.322 ipTM=0.258 tol=7.13
2024-07-09 19:59:59,085 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=44.5 pTM=0.323 ipTM=0.264 tol=5.87
2024-07-09 20:01:35,604 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=44.5 pTM=0.324 ipTM=0.297 tol=6.22
2024-07-09 20:03:12,129 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=44.6 pTM=0.322 ipTM=0.261 tol=5.96
2024-07-09 20:04:48,643 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=44.5 pTM=0.321 ipTM=0.255 tol=5.13
2024-07-09 20:06:25,133 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=44.5 pTM=0.322 ipTM=0.25 tol=5.01
2024-07-09 20:08:01,535 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=44.6 pTM=0.321 ipTM=0.253 tol=8.41
2024-07-09 20:09:38,060 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=44.7 pTM=0.321 ipTM=0.245 tol=5.16
2024-07-09 20:11:14,489 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=44.6 pTM=0.32 ipTM=0.239 tol=9.78
2024-07-09 20:12:51,030 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=44.5 pTM=0.32 ipTM=0.242 tol=4.43
2024-07-09 20:14:27,580 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44.5 pTM=0.32 ipTM=0.234 tol=4.86
2024-07-09 20:16:04,141 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=44.6 pTM=0.321 ipTM=0.241 tol=4.5
2024-07-09 20:17:40,703 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=44.6 pTM=0.321 ipTM=0.234 tol=4.7
2024-07-09 20:19:17,227 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=44.6 pTM=0.32 ipTM=0.244 tol=3.98
2024-07-09 20:20:53,722 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=44.6 pTM=0.321 ipTM=0.238 tol=4.25
2024-07-09 20:22:30,233 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44.5 pTM=0.321 ipTM=0.245 tol=10.1
2024-07-09 20:24:06,745 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44.5 pTM=0.32 ipTM=0.238 tol=5.7
2024-07-09 20:25:43,287 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=44.5 pTM=0.321 ipTM=0.242 tol=5.86
2024-07-09 20:27:19,829 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44.5 pTM=0.321 ipTM=0.238 tol=6.16
2024-07-09 20:28:56,410 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=44.5 pTM=0.321 ipTM=0.242 tol=4.51
2024-07-09 20:30:32,958 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=44.4 pTM=0.321 ipTM=0.233 tol=8.12
2024-07-09 20:32:09,481 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=44.6 pTM=0.32 ipTM=0.232 tol=9.19
2024-07-09 20:32:09,483 alphafold2_multimer_v3_model_2_seed_000 took 2991.3s (30 recycles)
2024-07-09 20:33:47,904 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42.4 pTM=0.316 ipTM=0.245
2024-07-09 20:35:24,556 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=42.6 pTM=0.317 ipTM=0.24 tol=19.9
2024-07-09 20:37:01,291 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=42.6 pTM=0.321 ipTM=0.268 tol=14.2
2024-07-09 20:38:37,990 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=42.7 pTM=0.333 ipTM=0.368 tol=8.65
2024-07-09 20:40:14,727 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=42.9 pTM=0.345 ipTM=0.379 tol=7.07
2024-07-09 20:41:51,446 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=42.9 pTM=0.346 ipTM=0.378 tol=6.56
2024-07-09 20:43:28,116 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=42.9 pTM=0.355 ipTM=0.384 tol=4.89
2024-07-09 20:45:04,810 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=43 pTM=0.354 ipTM=0.382 tol=5.29
2024-07-09 20:46:41,465 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=43.1 pTM=0.356 ipTM=0.384 tol=4.28
2024-07-09 20:48:18,142 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=43.1 pTM=0.352 ipTM=0.379 tol=3.67
2024-07-09 20:49:54,825 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=43.1 pTM=0.353 ipTM=0.386 tol=5.05
2024-07-09 20:51:31,456 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=43.1 pTM=0.355 ipTM=0.389 tol=5.26
2024-07-09 20:53:08,099 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=43 pTM=0.355 ipTM=0.381 tol=6.73
2024-07-09 20:54:44,768 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=42.9 pTM=0.354 ipTM=0.386 tol=4.51
2024-07-09 20:56:21,377 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=43.1 pTM=0.36 ipTM=0.391 tol=5.16
2024-07-09 20:57:58,033 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=43.1 pTM=0.357 ipTM=0.389 tol=7.01
2024-07-09 20:59:34,550 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=43.2 pTM=0.36 ipTM=0.387 tol=5.39
2024-07-09 21:01:11,031 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=43.1 pTM=0.36 ipTM=0.387 tol=4.78
2024-07-09 21:02:47,586 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=43 pTM=0.356 ipTM=0.383 tol=5.12
2024-07-09 21:04:24,281 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=43.3 pTM=0.362 ipTM=0.388 tol=4.25
2024-07-09 21:06:00,962 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=43.3 pTM=0.362 ipTM=0.386 tol=4.63
2024-07-09 21:07:37,697 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=43.2 pTM=0.358 ipTM=0.385 tol=4.37
2024-07-09 21:09:14,406 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=43.1 pTM=0.36 ipTM=0.38 tol=3.83
2024-07-09 21:10:51,101 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=43.2 pTM=0.358 ipTM=0.378 tol=4.12
2024-07-09 21:12:27,793 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=43.1 pTM=0.357 ipTM=0.378 tol=3.68
2024-07-09 21:14:04,463 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=43.2 pTM=0.358 ipTM=0.384 tol=7.29
2024-07-09 21:15:41,115 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=43 pTM=0.351 ipTM=0.376 tol=5.57
2024-07-09 21:17:17,796 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=43.2 pTM=0.358 ipTM=0.386 tol=6.17
2024-07-09 21:18:54,437 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=43.1 pTM=0.355 ipTM=0.381 tol=5.46
2024-07-09 21:20:31,156 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=43.1 pTM=0.353 ipTM=0.382 tol=4.71
2024-07-09 21:22:07,796 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=43.1 pTM=0.357 ipTM=0.387 tol=5.55
2024-07-09 21:22:07,797 alphafold2_multimer_v3_model_3_seed_000 took 2996.6s (30 recycles)
2024-07-09 21:23:46,190 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=40.7 pTM=0.314 ipTM=0.227
2024-07-09 21:25:22,926 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=41.2 pTM=0.32 ipTM=0.23 tol=16.8
2024-07-09 21:26:59,692 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=41.7 pTM=0.316 ipTM=0.239 tol=11.8
2024-07-09 21:28:36,670 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=41.4 pTM=0.319 ipTM=0.238 tol=7.98
2024-07-09 21:30:13,632 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=41.6 pTM=0.322 ipTM=0.284 tol=7.41
2024-07-09 21:31:50,543 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=41.3 pTM=0.323 ipTM=0.285 tol=5.75
2024-07-09 21:33:27,457 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=41.4 pTM=0.323 ipTM=0.31 tol=4.88
2024-07-09 21:35:04,278 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=41.5 pTM=0.322 ipTM=0.325 tol=3.79
2024-07-09 21:36:41,133 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=41.5 pTM=0.321 ipTM=0.332 tol=4.79
2024-07-09 21:38:17,873 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.5 pTM=0.324 ipTM=0.344 tol=3.82
2024-07-09 21:39:54,708 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=41.6 pTM=0.324 ipTM=0.346 tol=2.81
2024-07-09 21:41:31,485 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=41.6 pTM=0.326 ipTM=0.355 tol=10.2
2024-07-09 21:43:08,337 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=41.4 pTM=0.324 ipTM=0.339 tol=7.35
2024-07-09 21:44:45,203 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=41.6 pTM=0.325 ipTM=0.345 tol=6.93
2024-07-09 21:46:22,102 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=41.6 pTM=0.325 ipTM=0.35 tol=7.33
2024-07-09 21:47:59,065 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=41.6 pTM=0.326 ipTM=0.349 tol=5.01
2024-07-09 21:49:35,979 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=41.8 pTM=0.326 ipTM=0.344 tol=3.86
2024-07-09 21:51:12,922 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=41.8 pTM=0.325 ipTM=0.349 tol=3.08
2024-07-09 21:52:49,897 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=41.7 pTM=0.324 ipTM=0.344 tol=3.54
2024-07-09 21:54:26,859 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=41.7 pTM=0.325 ipTM=0.345 tol=3.51
2024-07-09 21:56:03,853 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=41.7 pTM=0.327 ipTM=0.353 tol=2.59
2024-07-09 21:57:40,821 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=41.7 pTM=0.325 ipTM=0.351 tol=3.39
2024-07-09 21:59:17,791 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=41.7 pTM=0.328 ipTM=0.354 tol=2.73
2024-07-09 22:00:54,696 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=41.7 pTM=0.327 ipTM=0.358 tol=2.65
2024-07-09 22:02:31,600 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=41.6 pTM=0.325 ipTM=0.344 tol=2.54
2024-07-09 22:04:08,553 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=41.7 pTM=0.323 ipTM=0.343 tol=3.42
2024-07-09 22:05:45,343 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=41.6 pTM=0.326 ipTM=0.349 tol=2.91
2024-07-09 22:07:22,244 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=41.6 pTM=0.328 ipTM=0.352 tol=2.46
2024-07-09 22:08:59,095 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=41.8 pTM=0.326 ipTM=0.341 tol=2.99
2024-07-09 22:10:36,048 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=41.8 pTM=0.326 ipTM=0.348 tol=2.86
2024-07-09 22:12:12,964 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=41.6 pTM=0.326 ipTM=0.347 tol=2.57
2024-07-09 22:12:12,966 alphafold2_multimer_v3_model_4_seed_000 took 3003.5s (30 recycles)
2024-07-09 22:13:51,360 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=42.8 pTM=0.311 ipTM=0.246
2024-07-09 22:15:28,222 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=43.2 pTM=0.308 ipTM=0.223 tol=15.3
2024-07-09 22:17:05,269 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=43.2 pTM=0.311 ipTM=0.246 tol=11.4
2024-07-09 22:18:42,322 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=43.3 pTM=0.312 ipTM=0.252 tol=9.1
2024-07-09 22:20:19,372 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=43.2 pTM=0.313 ipTM=0.228 tol=9.11
2024-07-09 22:21:56,361 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=43.3 pTM=0.313 ipTM=0.24 tol=7.91
2024-07-09 22:23:33,389 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=43 pTM=0.314 ipTM=0.248 tol=9.05
2024-07-09 22:25:10,401 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=43.3 pTM=0.313 ipTM=0.235 tol=10.5
2024-07-09 22:26:47,455 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=43.3 pTM=0.313 ipTM=0.238 tol=13.2
2024-07-09 22:28:24,444 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=43.3 pTM=0.313 ipTM=0.235 tol=6.94
2024-07-09 22:30:01,421 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=43.4 pTM=0.313 ipTM=0.239 tol=5.91
2024-07-09 22:31:38,341 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43.3 pTM=0.315 ipTM=0.235 tol=10.3
2024-07-09 22:33:15,286 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43.2 pTM=0.314 ipTM=0.24 tol=10.6
2024-07-09 22:34:52,217 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=43.3 pTM=0.313 ipTM=0.237 tol=6.44
2024-07-09 22:36:29,198 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=43.3 pTM=0.315 ipTM=0.241 tol=6.74
2024-07-09 22:38:06,179 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=43.3 pTM=0.314 ipTM=0.243 tol=9.69
2024-07-09 22:39:43,209 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43.4 pTM=0.316 ipTM=0.242 tol=10.3
2024-07-09 22:41:20,331 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.3 pTM=0.314 ipTM=0.239 tol=6.46
2024-07-09 22:42:57,385 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.2 pTM=0.315 ipTM=0.237 tol=5.98
2024-07-09 22:44:34,464 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43.4 pTM=0.314 ipTM=0.233 tol=6.28
2024-07-09 22:46:11,513 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.3 pTM=0.313 ipTM=0.234 tol=7.27
2024-07-09 22:47:48,525 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.4 pTM=0.312 ipTM=0.238 tol=6.63
2024-07-09 22:49:25,557 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.2 pTM=0.312 ipTM=0.254 tol=6.59
2024-07-09 22:51:02,573 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.4 pTM=0.312 ipTM=0.242 tol=5.74
2024-07-09 22:52:39,639 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=43.2 pTM=0.312 ipTM=0.23 tol=5.5
2024-07-09 22:54:16,759 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.5 pTM=0.312 ipTM=0.245 tol=9.41
2024-07-09 22:55:53,921 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.4 pTM=0.313 ipTM=0.236 tol=11.3
2024-07-09 22:57:30,877 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.4 pTM=0.313 ipTM=0.24 tol=7.88
2024-07-09 22:59:07,975 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43.5 pTM=0.315 ipTM=0.232 tol=9.97
2024-07-09 23:00:45,038 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.6 pTM=0.313 ipTM=0.237 tol=11.8
2024-07-09 23:02:22,064 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43.5 pTM=0.314 ipTM=0.233 tol=5.87
2024-07-09 23:02:22,066 alphafold2_multimer_v3_model_5_seed_000 took 3007.4s (30 recycles)
2024-07-09 23:02:23,764 reranking models by 'multimer' metric
2024-07-09 23:02:27,574 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 23:07:24,601 Relaxation took 300.8s
2024-07-09 23:07:24,602 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=43.1 pTM=0.357 ipTM=0.387
2024-07-09 23:12:55,036 Relaxation took 330.4s
2024-07-09 23:12:55,036 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=41.6 pTM=0.326 ipTM=0.347
2024-07-09 23:18:18,261 Relaxation took 323.2s
2024-07-09 23:18:18,262 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=42 pTM=0.316 ipTM=0.245
2024-07-09 23:26:03,216 Relaxation took 465.0s
2024-07-09 23:26:03,216 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43.5 pTM=0.314 ipTM=0.233
2024-07-09 23:31:18,481 Relaxation took 315.3s
2024-07-09 23:31:18,481 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=44.6 pTM=0.32 ipTM=0.232
2024-07-09 23:31:22,295 Done