2024-07-09 19:04:40,945 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 19:04:41,263 Running on GPU
2024-07-09 19:04:44,752 Found 6 citations for tools or databases
2024-07-09 19:04:44,752 Query 1/1: DMRTB_BUD23 (length 623)
2024-07-09 19:04:45,267 Sleeping for 6s. Reason: PENDING
2024-07-09 19:04:51,713 Sleeping for 5s. Reason: RUNNING
2024-07-09 19:04:57,138 Sleeping for 7s. Reason: RUNNING
2024-07-09 19:05:04,556 Sleeping for 7s. Reason: RUNNING
2024-07-09 19:05:11,975 Sleeping for 10s. Reason: RUNNING
2024-07-09 19:05:22,417 Sleeping for 8s. Reason: RUNNING
2024-07-09 19:05:30,841 Sleeping for 5s. Reason: RUNNING
2024-07-09 19:05:36,285 Sleeping for 5s. Reason: RUNNING
2024-07-09 19:05:41,708 Sleeping for 5s. Reason: RUNNING
2024-07-09 19:05:47,129 Sleeping for 8s. Reason: RUNNING
2024-07-09 19:05:58,436 Sleeping for 6s. Reason: PENDING
2024-07-09 19:06:04,853 Sleeping for 8s. Reason: RUNNING
2024-07-09 19:06:13,283 Sleeping for 8s. Reason: RUNNING
2024-07-09 19:06:21,698 Sleeping for 5s. Reason: RUNNING
2024-07-09 19:06:27,125 Sleeping for 7s. Reason: RUNNING
2024-07-09 19:06:34,565 Sleeping for 9s. Reason: RUNNING
2024-07-09 19:06:43,988 Sleeping for 5s. Reason: RUNNING
2024-07-09 19:06:51,102 Setting max_seq=508, max_extra_seq=2048
2024-07-09 19:09:39,074 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.2 pTM=0.429 ipTM=0.167
2024-07-09 19:09:46,868 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.5 pTM=0.503 ipTM=0.575 tol=10.2
2024-07-09 19:09:54,679 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.8 pTM=0.465 ipTM=0.396 tol=11.5
2024-07-09 19:10:02,495 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.2 pTM=0.469 ipTM=0.402 tol=7.88
2024-07-09 19:10:10,315 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.3 pTM=0.467 ipTM=0.402 tol=2.98
2024-07-09 19:10:18,151 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54 pTM=0.466 ipTM=0.392 tol=3.54
2024-07-09 19:10:25,994 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54 pTM=0.466 ipTM=0.394 tol=4.43
2024-07-09 19:10:33,843 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.1 pTM=0.466 ipTM=0.391 tol=3.89
2024-07-09 19:10:41,689 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54 pTM=0.461 ipTM=0.368 tol=4.08
2024-07-09 19:10:49,545 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.8 pTM=0.464 ipTM=0.392 tol=2.07
2024-07-09 19:10:57,411 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.3 pTM=0.463 ipTM=0.405 tol=2.25
2024-07-09 19:11:05,280 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.8 pTM=0.46 ipTM=0.39 tol=3.2
2024-07-09 19:11:13,157 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.4 pTM=0.461 ipTM=0.399 tol=6.11
2024-07-09 19:11:21,032 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.5 pTM=0.465 ipTM=0.411 tol=5.86
2024-07-09 19:11:28,911 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.3 pTM=0.459 ipTM=0.382 tol=1.46
2024-07-09 19:11:36,792 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.4 pTM=0.466 ipTM=0.411 tol=1.79
2024-07-09 19:11:44,667 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.3 pTM=0.462 ipTM=0.405 tol=3.34
2024-07-09 19:11:52,547 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.3 pTM=0.465 ipTM=0.398 tol=3.82
2024-07-09 19:12:00,422 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.3 pTM=0.462 ipTM=0.396 tol=1.4
2024-07-09 19:12:08,299 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.6 pTM=0.468 ipTM=0.417 tol=1.35
2024-07-09 19:12:16,187 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.8 pTM=0.464 ipTM=0.41 tol=1.44
2024-07-09 19:12:24,068 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.6 pTM=0.467 ipTM=0.411 tol=1.91
2024-07-09 19:12:31,954 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.3 pTM=0.464 ipTM=0.401 tol=2.89
2024-07-09 19:12:39,831 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.5 pTM=0.466 ipTM=0.414 tol=1.28
2024-07-09 19:12:47,721 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.3 pTM=0.462 ipTM=0.384 tol=1.5
2024-07-09 19:12:55,614 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.2 pTM=0.465 ipTM=0.398 tol=0.946
2024-07-09 19:13:03,502 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.3 pTM=0.461 ipTM=0.379 tol=1.37
2024-07-09 19:13:11,400 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.8 pTM=0.468 ipTM=0.425 tol=1.86
2024-07-09 19:13:19,296 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.5 pTM=0.465 ipTM=0.397 tol=1.16
2024-07-09 19:13:27,182 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.3 pTM=0.467 ipTM=0.41 tol=1.95
2024-07-09 19:13:35,073 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.1 pTM=0.459 ipTM=0.366 tol=1.4
2024-07-09 19:13:35,074 alphafold2_multimer_v3_model_1_seed_000 took 395.2s (30 recycles)
2024-07-09 19:13:43,225 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.1 pTM=0.42 ipTM=0.165
2024-07-09 19:13:51,152 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.6 pTM=0.448 ipTM=0.397 tol=15.4
2024-07-09 19:13:59,083 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.9 pTM=0.425 ipTM=0.225 tol=16
2024-07-09 19:14:07,007 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.1 pTM=0.424 ipTM=0.179 tol=7.97
2024-07-09 19:14:14,925 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.2 pTM=0.453 ipTM=0.386 tol=5.48
2024-07-09 19:14:22,848 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.6 pTM=0.432 ipTM=0.235 tol=4.36
2024-07-09 19:14:30,766 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.9 pTM=0.445 ipTM=0.34 tol=5.97
2024-07-09 19:14:38,682 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.2 pTM=0.439 ipTM=0.279 tol=4.64
2024-07-09 19:14:46,592 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.3 pTM=0.448 ipTM=0.378 tol=2.89
2024-07-09 19:14:54,503 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53 pTM=0.44 ipTM=0.308 tol=2.53
2024-07-09 19:15:02,425 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.4 pTM=0.454 ipTM=0.385 tol=3.45
2024-07-09 19:15:10,343 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.7 pTM=0.438 ipTM=0.299 tol=4.42
2024-07-09 19:15:18,262 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.6 pTM=0.458 ipTM=0.442 tol=2.65
2024-07-09 19:15:26,177 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.8 pTM=0.439 ipTM=0.301 tol=3.71
2024-07-09 19:15:34,094 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.2 pTM=0.455 ipTM=0.409 tol=4.49
2024-07-09 19:15:42,015 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.1 pTM=0.441 ipTM=0.312 tol=3.57
2024-07-09 19:15:49,933 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.3 pTM=0.458 ipTM=0.423 tol=3.85
2024-07-09 19:15:57,850 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53 pTM=0.442 ipTM=0.325 tol=3.93
2024-07-09 19:16:05,754 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.6 pTM=0.46 ipTM=0.425 tol=4.12
2024-07-09 19:16:13,668 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.2 pTM=0.446 ipTM=0.34 tol=3.04
2024-07-09 19:16:21,583 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.6 pTM=0.463 ipTM=0.449 tol=2.83
2024-07-09 19:16:29,502 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.2 pTM=0.446 ipTM=0.338 tol=3.46
2024-07-09 19:16:37,431 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.2 pTM=0.469 ipTM=0.478 tol=3.42
2024-07-09 19:16:45,350 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.5 pTM=0.452 ipTM=0.36 tol=3.86
2024-07-09 19:16:53,267 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.8 pTM=0.472 ipTM=0.434 tol=4.78
2024-07-09 19:17:01,185 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.1 pTM=0.455 ipTM=0.349 tol=5.33
2024-07-09 19:17:09,100 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.9 pTM=0.47 ipTM=0.46 tol=2.8
2024-07-09 19:17:17,018 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.5 pTM=0.453 ipTM=0.362 tol=5.82
2024-07-09 19:17:24,941 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.9 pTM=0.466 ipTM=0.454 tol=2.12
2024-07-09 19:17:32,858 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.5 pTM=0.452 ipTM=0.351 tol=4.33
2024-07-09 19:17:40,773 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.5 pTM=0.462 ipTM=0.443 tol=4.36
2024-07-09 19:17:40,774 alphafold2_multimer_v3_model_2_seed_000 took 245.4s (30 recycles)
2024-07-09 19:17:48,945 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.5 pTM=0.422 ipTM=0.176
2024-07-09 19:17:56,878 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.7 pTM=0.419 ipTM=0.209 tol=13.2
2024-07-09 19:18:04,818 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50.6 pTM=0.42 ipTM=0.186 tol=7.33
2024-07-09 19:18:12,768 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=50.9 pTM=0.425 ipTM=0.191 tol=3.67
2024-07-09 19:18:20,708 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.9 pTM=0.44 ipTM=0.283 tol=3.92
2024-07-09 19:18:28,656 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.4 pTM=0.455 ipTM=0.33 tol=2.5
2024-07-09 19:18:36,596 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.4 pTM=0.459 ipTM=0.406 tol=2.4
2024-07-09 19:18:44,543 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.7 pTM=0.458 ipTM=0.362 tol=4
2024-07-09 19:18:52,488 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.2 pTM=0.462 ipTM=0.411 tol=2.12
2024-07-09 19:19:00,435 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.7 pTM=0.463 ipTM=0.401 tol=2.18
2024-07-09 19:19:08,381 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.8 pTM=0.464 ipTM=0.417 tol=2.43
2024-07-09 19:19:16,321 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.9 pTM=0.471 ipTM=0.428 tol=1.71
2024-07-09 19:19:24,265 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.8 pTM=0.464 ipTM=0.417 tol=1.33
2024-07-09 19:19:32,203 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.7 pTM=0.469 ipTM=0.423 tol=1.75
2024-07-09 19:19:40,142 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54 pTM=0.467 ipTM=0.428 tol=1.12
2024-07-09 19:19:48,079 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.5 pTM=0.464 ipTM=0.41 tol=1.28
2024-07-09 19:19:56,013 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54 pTM=0.473 ipTM=0.433 tol=1.19
2024-07-09 19:20:03,956 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.4 pTM=0.462 ipTM=0.4 tol=1.11
2024-07-09 19:20:11,892 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.9 pTM=0.469 ipTM=0.424 tol=1.32
2024-07-09 19:20:19,830 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.6 pTM=0.464 ipTM=0.42 tol=1.33
2024-07-09 19:20:27,764 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.4 pTM=0.471 ipTM=0.425 tol=1.28
2024-07-09 19:20:35,706 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.6 pTM=0.459 ipTM=0.368 tol=1.4
2024-07-09 19:20:43,649 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.1 pTM=0.474 ipTM=0.44 tol=1.68
2024-07-09 19:20:51,590 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.7 pTM=0.459 ipTM=0.367 tol=1.7
2024-07-09 19:20:59,535 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.5 pTM=0.469 ipTM=0.435 tol=2.03
2024-07-09 19:21:07,472 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.7 pTM=0.461 ipTM=0.366 tol=1.44
2024-07-09 19:21:15,412 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.6 pTM=0.466 ipTM=0.421 tol=1.45
2024-07-09 19:21:23,356 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.2 pTM=0.464 ipTM=0.392 tol=1.14
2024-07-09 19:21:31,298 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.6 pTM=0.464 ipTM=0.416 tol=1.31
2024-07-09 19:21:39,245 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.7 pTM=0.466 ipTM=0.394 tol=1.5
2024-07-09 19:21:47,178 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.2 pTM=0.466 ipTM=0.418 tol=1.61
2024-07-09 19:21:47,179 alphafold2_multimer_v3_model_3_seed_000 took 246.2s (30 recycles)
2024-07-09 19:21:55,376 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.7 pTM=0.411 ipTM=0.172
2024-07-09 19:22:03,296 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.4 pTM=0.433 ipTM=0.183 tol=16.6
2024-07-09 19:22:11,226 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.5 pTM=0.496 ipTM=0.477 tol=8.16
2024-07-09 19:22:19,160 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.6 pTM=0.477 ipTM=0.471 tol=6.11
2024-07-09 19:22:27,079 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.7 pTM=0.504 ipTM=0.558 tol=4.91
2024-07-09 19:22:35,004 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.7 pTM=0.498 ipTM=0.574 tol=6.66
2024-07-09 19:22:42,922 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.3 pTM=0.509 ipTM=0.574 tol=12.2
2024-07-09 19:22:50,827 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55.3 pTM=0.507 ipTM=0.57 tol=4.29
2024-07-09 19:22:58,736 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.9 pTM=0.502 ipTM=0.562 tol=2.72
2024-07-09 19:23:06,642 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=54.8 pTM=0.504 ipTM=0.581 tol=1.2
2024-07-09 19:23:14,556 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.1 pTM=0.5 ipTM=0.581 tol=2.12
2024-07-09 19:23:22,467 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.7 pTM=0.499 ipTM=0.574 tol=3.23
2024-07-09 19:23:30,380 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.2 pTM=0.501 ipTM=0.581 tol=3.5
2024-07-09 19:23:38,291 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.9 pTM=0.501 ipTM=0.583 tol=4.16
2024-07-09 19:23:46,207 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=55.5 pTM=0.502 ipTM=0.582 tol=3.87
2024-07-09 19:23:54,122 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55 pTM=0.502 ipTM=0.582 tol=2.48
2024-07-09 19:24:02,044 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.7 pTM=0.5 ipTM=0.579 tol=2.89
2024-07-09 19:24:09,962 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=54.7 pTM=0.499 ipTM=0.577 tol=1.68
2024-07-09 19:24:17,888 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.1 pTM=0.497 ipTM=0.571 tol=1.87
2024-07-09 19:24:25,808 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54.8 pTM=0.496 ipTM=0.58 tol=2.76
2024-07-09 19:24:33,726 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.2 pTM=0.498 ipTM=0.571 tol=1.98
2024-07-09 19:24:41,642 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=54.8 pTM=0.499 ipTM=0.565 tol=5.55
2024-07-09 19:24:49,558 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.8 pTM=0.499 ipTM=0.576 tol=2.64
2024-07-09 19:24:57,474 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54.7 pTM=0.497 ipTM=0.56 tol=4.14
2024-07-09 19:25:05,397 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=54.4 pTM=0.499 ipTM=0.57 tol=2.31
2024-07-09 19:25:13,314 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=54.4 pTM=0.494 ipTM=0.564 tol=3.37
2024-07-09 19:25:21,234 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=54.8 pTM=0.498 ipTM=0.573 tol=1.58
2024-07-09 19:25:29,152 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.1 pTM=0.495 ipTM=0.581 tol=3.33
2024-07-09 19:25:37,069 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.8 pTM=0.497 ipTM=0.572 tol=3.8
2024-07-09 19:25:44,990 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=54.8 pTM=0.497 ipTM=0.578 tol=3.29
2024-07-09 19:25:52,906 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.4 pTM=0.497 ipTM=0.562 tol=2.48
2024-07-09 19:25:52,907 alphafold2_multimer_v3_model_4_seed_000 took 245.5s (30 recycles)
2024-07-09 19:26:01,099 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50 pTM=0.436 ipTM=0.39
2024-07-09 19:26:09,042 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.9 pTM=0.439 ipTM=0.421 tol=17.4
2024-07-09 19:26:16,990 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.9 pTM=0.482 ipTM=0.553 tol=8.78
2024-07-09 19:26:24,964 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.2 pTM=0.467 ipTM=0.427 tol=5.12
2024-07-09 19:26:32,919 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.7 pTM=0.466 ipTM=0.45 tol=3
2024-07-09 19:26:40,884 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.5 pTM=0.451 ipTM=0.342 tol=9.58
2024-07-09 19:26:48,837 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.3 pTM=0.458 ipTM=0.375 tol=4.98
2024-07-09 19:26:56,791 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.8 pTM=0.444 ipTM=0.265 tol=4.47
2024-07-09 19:27:04,740 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.9 pTM=0.451 ipTM=0.303 tol=2.56
2024-07-09 19:27:12,699 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.1 pTM=0.445 ipTM=0.294 tol=4.41
2024-07-09 19:27:20,657 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.2 pTM=0.447 ipTM=0.354 tol=3.01
2024-07-09 19:27:28,611 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53 pTM=0.453 ipTM=0.337 tol=3.93
2024-07-09 19:27:36,565 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.7 pTM=0.447 ipTM=0.313 tol=2.34
2024-07-09 19:27:44,517 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.9 pTM=0.453 ipTM=0.369 tol=4.63
2024-07-09 19:27:52,465 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.8 pTM=0.443 ipTM=0.272 tol=4.51
2024-07-09 19:28:00,413 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.2 pTM=0.461 ipTM=0.404 tol=3.74
2024-07-09 19:28:08,368 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.4 pTM=0.453 ipTM=0.348 tol=2.53
2024-07-09 19:28:16,320 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.3 pTM=0.461 ipTM=0.402 tol=3.56
2024-07-09 19:28:24,274 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.3 pTM=0.449 ipTM=0.307 tol=4.09
2024-07-09 19:28:32,222 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.3 pTM=0.459 ipTM=0.398 tol=3.73
2024-07-09 19:28:40,177 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.3 pTM=0.445 ipTM=0.281 tol=2.99
2024-07-09 19:28:48,127 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.1 pTM=0.46 ipTM=0.362 tol=4.59
2024-07-09 19:28:56,082 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.9 pTM=0.446 ipTM=0.284 tol=4.36
2024-07-09 19:29:04,030 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.3 pTM=0.46 ipTM=0.415 tol=4.13
2024-07-09 19:29:11,978 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.3 pTM=0.452 ipTM=0.343 tol=4.61
2024-07-09 19:29:19,924 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.3 pTM=0.46 ipTM=0.4 tol=1.85
2024-07-09 19:29:27,876 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.1 pTM=0.448 ipTM=0.302 tol=4.16
2024-07-09 19:29:35,829 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.6 pTM=0.461 ipTM=0.424 tol=3.83
2024-07-09 19:29:43,787 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.5 pTM=0.452 ipTM=0.356 tol=3.39
2024-07-09 19:29:51,741 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.4 pTM=0.459 ipTM=0.405 tol=4.73
2024-07-09 19:29:59,694 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.9 pTM=0.448 ipTM=0.31 tol=4.86
2024-07-09 19:29:59,694 alphafold2_multimer_v3_model_5_seed_000 took 246.5s (30 recycles)
2024-07-09 19:29:59,950 reranking models by 'multimer' metric
2024-07-09 19:30:03,301 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 19:30:35,085 Relaxation took 35.1s
2024-07-09 19:30:35,085 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.4 pTM=0.497 ipTM=0.562
2024-07-09 19:31:10,584 Relaxation took 35.5s
2024-07-09 19:31:10,584 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.5 pTM=0.462 ipTM=0.443
2024-07-09 19:31:38,605 Relaxation took 28.0s
2024-07-09 19:31:38,605 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.2 pTM=0.466 ipTM=0.418
2024-07-09 19:32:12,712 Relaxation took 34.1s
2024-07-09 19:32:12,712 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.1 pTM=0.459 ipTM=0.366
2024-07-09 19:32:42,766 Relaxation took 30.1s
2024-07-09 19:32:42,767 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.9 pTM=0.448 ipTM=0.31
2024-07-09 19:32:43,914 Done