2024-07-09 19:12:20,138 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 19:12:20,463 Running on GPU
2024-07-09 19:12:24,127 Found 6 citations for tools or databases
2024-07-09 19:12:24,127 Query 1/1: DNJB2_STC2 (length 626)
2024-07-09 19:12:24,588 Sleeping for 6s. Reason: PENDING
2024-07-09 19:12:31,013 Sleeping for 7s. Reason: RUNNING
2024-07-09 19:12:38,443 Sleeping for 8s. Reason: RUNNING
2024-07-09 19:12:46,859 Sleeping for 9s. Reason: RUNNING
2024-07-09 19:12:56,286 Sleeping for 8s. Reason: RUNNING
2024-07-09 19:13:04,705 Sleeping for 6s. Reason: RUNNING
2024-07-09 19:13:11,153 Sleeping for 7s. Reason: RUNNING
2024-07-09 19:13:18,577 Sleeping for 8s. Reason: RUNNING
2024-07-09 19:13:26,988 Sleeping for 5s. Reason: RUNNING
2024-07-09 19:13:32,936 Sleeping for 7s. Reason: RUNNING
2024-07-09 19:13:40,355 Sleeping for 5s. Reason: RUNNING
2024-07-09 19:13:45,802 Sleeping for 6s. Reason: RUNNING
2024-07-09 19:13:52,216 Sleeping for 7s. Reason: RUNNING
2024-07-09 19:13:59,629 Sleeping for 8s. Reason: RUNNING
2024-07-09 19:14:08,049 Sleeping for 9s. Reason: RUNNING
2024-07-09 19:14:31,361 Sleeping for 5s. Reason: PENDING
2024-07-09 19:14:36,785 Sleeping for 6s. Reason: RUNNING
2024-07-09 19:14:43,207 Sleeping for 7s. Reason: RUNNING
2024-07-09 19:14:50,613 Sleeping for 5s. Reason: RUNNING
2024-07-09 19:14:56,067 Sleeping for 5s. Reason: RUNNING
2024-07-09 19:15:01,486 Sleeping for 9s. Reason: RUNNING
2024-07-09 19:15:10,909 Sleeping for 10s. Reason: RUNNING
2024-07-09 19:15:24,387 Setting max_seq=508, max_extra_seq=2048
2024-07-09 19:17:57,432 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.9 pTM=0.334 ipTM=0.141
2024-07-09 19:18:05,468 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.2 pTM=0.346 ipTM=0.137 tol=9.41
2024-07-09 19:18:13,509 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.1 pTM=0.347 ipTM=0.133 tol=10.2
2024-07-09 19:18:21,559 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.3 pTM=0.349 ipTM=0.128 tol=9.28
2024-07-09 19:18:29,611 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.2 pTM=0.348 ipTM=0.127 tol=9.88
2024-07-09 19:18:37,687 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.2 pTM=0.351 ipTM=0.132 tol=9.23
2024-07-09 19:18:45,744 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53 pTM=0.349 ipTM=0.128 tol=9.41
2024-07-09 19:18:53,816 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.3 pTM=0.349 ipTM=0.129 tol=6.41
2024-07-09 19:19:01,892 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.4 pTM=0.348 ipTM=0.126 tol=3.44
2024-07-09 19:19:09,955 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.3 pTM=0.35 ipTM=0.129 tol=3.79
2024-07-09 19:19:18,042 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.6 pTM=0.348 ipTM=0.126 tol=3.83
2024-07-09 19:19:26,129 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.6 pTM=0.349 ipTM=0.128 tol=4.37
2024-07-09 19:19:34,215 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.6 pTM=0.349 ipTM=0.127 tol=4.07
2024-07-09 19:19:42,309 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.4 pTM=0.349 ipTM=0.128 tol=2.89
2024-07-09 19:19:50,392 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53.5 pTM=0.35 ipTM=0.129 tol=3.07
2024-07-09 19:19:58,486 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.3 pTM=0.35 ipTM=0.128 tol=2.56
2024-07-09 19:20:06,581 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=53.6 pTM=0.35 ipTM=0.128 tol=3.74
2024-07-09 19:20:14,678 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.5 pTM=0.352 ipTM=0.132 tol=1.17
2024-07-09 19:20:22,772 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=53.5 pTM=0.35 ipTM=0.129 tol=2.42
2024-07-09 19:20:30,883 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.5 pTM=0.351 ipTM=0.13 tol=2.03
2024-07-09 19:20:38,990 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.5 pTM=0.35 ipTM=0.129 tol=1.63
2024-07-09 19:20:47,093 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.4 pTM=0.351 ipTM=0.131 tol=1.83
2024-07-09 19:20:55,192 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=53.6 pTM=0.35 ipTM=0.128 tol=3.39
2024-07-09 19:21:03,297 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53.7 pTM=0.35 ipTM=0.13 tol=5.8
2024-07-09 19:21:11,391 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=53.7 pTM=0.348 ipTM=0.125 tol=4.21
2024-07-09 19:21:19,486 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.5 pTM=0.35 ipTM=0.129 tol=2.76
2024-07-09 19:21:27,583 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53.4 pTM=0.35 ipTM=0.13 tol=3.11
2024-07-09 19:21:35,679 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.4 pTM=0.35 ipTM=0.13 tol=3.16
2024-07-09 19:21:43,777 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.5 pTM=0.35 ipTM=0.13 tol=2.58
2024-07-09 19:21:51,876 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.6 pTM=0.35 ipTM=0.129 tol=7.56
2024-07-09 19:21:59,973 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.3 pTM=0.349 ipTM=0.129 tol=6.92
2024-07-09 19:21:59,974 alphafold2_multimer_v3_model_1_seed_000 took 390.7s (30 recycles)
2024-07-09 19:22:08,330 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.6 pTM=0.365 ipTM=0.196
2024-07-09 19:22:16,466 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.5 pTM=0.347 ipTM=0.15 tol=9.39
2024-07-09 19:22:24,607 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.4 pTM=0.348 ipTM=0.193 tol=9.79
2024-07-09 19:22:32,737 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54 pTM=0.349 ipTM=0.193 tol=8.7
2024-07-09 19:22:40,869 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.8 pTM=0.352 ipTM=0.2 tol=9.76
2024-07-09 19:22:49,001 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.2 pTM=0.351 ipTM=0.196 tol=3.65
2024-07-09 19:22:57,133 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.8 pTM=0.353 ipTM=0.195 tol=3.64
2024-07-09 19:23:05,265 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.9 pTM=0.352 ipTM=0.188 tol=3.69
2024-07-09 19:23:13,396 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.8 pTM=0.352 ipTM=0.186 tol=2.04
2024-07-09 19:23:21,528 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.9 pTM=0.351 ipTM=0.192 tol=3.41
2024-07-09 19:23:29,662 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.7 pTM=0.351 ipTM=0.19 tol=3.54
2024-07-09 19:23:37,794 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.6 pTM=0.354 ipTM=0.193 tol=3.05
2024-07-09 19:23:45,921 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.7 pTM=0.354 ipTM=0.195 tol=3.35
2024-07-09 19:23:54,045 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.6 pTM=0.355 ipTM=0.198 tol=4.9
2024-07-09 19:24:02,173 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.7 pTM=0.354 ipTM=0.196 tol=5.11
2024-07-09 19:24:10,292 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.8 pTM=0.354 ipTM=0.197 tol=4.3
2024-07-09 19:24:18,421 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.8 pTM=0.354 ipTM=0.192 tol=5.95
2024-07-09 19:24:26,551 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.7 pTM=0.352 ipTM=0.194 tol=5.58
2024-07-09 19:24:34,675 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.6 pTM=0.352 ipTM=0.201 tol=4.69
2024-07-09 19:24:42,798 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.8 pTM=0.356 ipTM=0.196 tol=4.43
2024-07-09 19:24:50,920 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.7 pTM=0.355 ipTM=0.192 tol=3.31
2024-07-09 19:24:59,044 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.8 pTM=0.353 ipTM=0.186 tol=7.74
2024-07-09 19:25:07,171 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.1 pTM=0.352 ipTM=0.187 tol=6.15
2024-07-09 19:25:15,287 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.9 pTM=0.351 ipTM=0.194 tol=5.12
2024-07-09 19:25:23,413 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54 pTM=0.353 ipTM=0.194 tol=3.6
2024-07-09 19:25:31,532 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.8 pTM=0.353 ipTM=0.19 tol=2.58
2024-07-09 19:25:39,659 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.6 pTM=0.353 ipTM=0.196 tol=3.51
2024-07-09 19:25:47,785 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.9 pTM=0.352 ipTM=0.193 tol=2.29
2024-07-09 19:25:55,911 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.9 pTM=0.357 ipTM=0.19 tol=4.33
2024-07-09 19:26:04,041 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.9 pTM=0.353 ipTM=0.192 tol=4.63
2024-07-09 19:26:12,165 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.8 pTM=0.354 ipTM=0.192 tol=7.78
2024-07-09 19:26:12,166 alphafold2_multimer_v3_model_2_seed_000 took 251.9s (30 recycles)
2024-07-09 19:26:20,575 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.3 pTM=0.344 ipTM=0.173
2024-07-09 19:26:28,719 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.1 pTM=0.352 ipTM=0.139 tol=17.4
2024-07-09 19:26:36,876 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.8 pTM=0.356 ipTM=0.153 tol=11.3
2024-07-09 19:26:45,034 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.6 pTM=0.352 ipTM=0.165 tol=7.38
2024-07-09 19:26:53,198 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=50.1 pTM=0.354 ipTM=0.155 tol=4.78
2024-07-09 19:27:01,376 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50.1 pTM=0.354 ipTM=0.161 tol=3.23
2024-07-09 19:27:09,537 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.3 pTM=0.352 ipTM=0.16 tol=5.64
2024-07-09 19:27:17,709 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.8 pTM=0.35 ipTM=0.157 tol=4.37
2024-07-09 19:27:25,886 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=51.9 pTM=0.352 ipTM=0.161 tol=4.66
2024-07-09 19:27:34,081 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=51.9 pTM=0.351 ipTM=0.163 tol=2.99
2024-07-09 19:27:42,252 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.3 pTM=0.351 ipTM=0.163 tol=2.33
2024-07-09 19:27:50,436 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.2 pTM=0.351 ipTM=0.174 tol=2.99
2024-07-09 19:27:58,608 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.1 pTM=0.353 ipTM=0.165 tol=2.59
2024-07-09 19:28:06,779 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.1 pTM=0.352 ipTM=0.167 tol=2.01
2024-07-09 19:28:14,952 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.3 pTM=0.352 ipTM=0.169 tol=2.81
2024-07-09 19:28:23,126 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=52.4 pTM=0.353 ipTM=0.167 tol=2.58
2024-07-09 19:28:31,304 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=52.5 pTM=0.349 ipTM=0.169 tol=3.4
2024-07-09 19:28:39,476 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52.4 pTM=0.354 ipTM=0.166 tol=3.14
2024-07-09 19:28:47,651 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.5 pTM=0.349 ipTM=0.168 tol=4.45
2024-07-09 19:28:55,818 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=52.5 pTM=0.353 ipTM=0.163 tol=4.28
2024-07-09 19:29:03,993 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.2 pTM=0.35 ipTM=0.164 tol=2.68
2024-07-09 19:29:12,165 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.1 pTM=0.352 ipTM=0.162 tol=1.88
2024-07-09 19:29:20,328 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.1 pTM=0.35 ipTM=0.161 tol=3.37
2024-07-09 19:29:28,501 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.4 pTM=0.352 ipTM=0.164 tol=3.88
2024-07-09 19:29:36,673 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.4 pTM=0.352 ipTM=0.163 tol=1.63
2024-07-09 19:29:44,847 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.2 pTM=0.353 ipTM=0.162 tol=1.53
2024-07-09 19:29:53,018 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=51.8 pTM=0.35 ipTM=0.162 tol=1.45
2024-07-09 19:30:01,190 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=51.9 pTM=0.352 ipTM=0.163 tol=4.13
2024-07-09 19:30:09,366 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52 pTM=0.354 ipTM=0.168 tol=4.72
2024-07-09 19:30:17,541 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.3 pTM=0.354 ipTM=0.166 tol=3.05
2024-07-09 19:30:25,703 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=51.9 pTM=0.352 ipTM=0.162 tol=2.09
2024-07-09 19:30:25,703 alphafold2_multimer_v3_model_3_seed_000 took 253.3s (30 recycles)
2024-07-09 19:30:34,083 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.2 pTM=0.426 ipTM=0.312
2024-07-09 19:30:42,227 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.2 pTM=0.367 ipTM=0.185 tol=11.1
2024-07-09 19:30:50,383 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53 pTM=0.36 ipTM=0.206 tol=7.92
2024-07-09 19:30:58,530 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.6 pTM=0.371 ipTM=0.198 tol=7.97
2024-07-09 19:31:06,689 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53 pTM=0.359 ipTM=0.205 tol=4.09
2024-07-09 19:31:14,830 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.7 pTM=0.367 ipTM=0.205 tol=5.49
2024-07-09 19:31:22,985 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.1 pTM=0.365 ipTM=0.207 tol=5.17
2024-07-09 19:31:31,140 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.8 pTM=0.366 ipTM=0.203 tol=5.19
2024-07-09 19:31:39,289 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.5 pTM=0.362 ipTM=0.204 tol=8.47
2024-07-09 19:31:47,455 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.5 pTM=0.368 ipTM=0.21 tol=3.5
2024-07-09 19:31:55,609 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.1 pTM=0.362 ipTM=0.211 tol=8.76
2024-07-09 19:32:03,758 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.9 pTM=0.365 ipTM=0.214 tol=10.4
2024-07-09 19:32:11,904 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.2 pTM=0.364 ipTM=0.211 tol=2.95
2024-07-09 19:32:20,056 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.6 pTM=0.366 ipTM=0.213 tol=1.97
2024-07-09 19:32:28,208 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.6 pTM=0.364 ipTM=0.219 tol=5.78
2024-07-09 19:32:36,359 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.8 pTM=0.369 ipTM=0.218 tol=5.95
2024-07-09 19:32:44,519 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.7 pTM=0.362 ipTM=0.223 tol=4.14
2024-07-09 19:32:52,664 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.8 pTM=0.371 ipTM=0.212 tol=5.04
2024-07-09 19:33:00,820 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.5 pTM=0.362 ipTM=0.218 tol=4.88
2024-07-09 19:33:08,964 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.9 pTM=0.366 ipTM=0.216 tol=3.75
2024-07-09 19:33:17,113 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.5 pTM=0.361 ipTM=0.213 tol=2.28
2024-07-09 19:33:25,258 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.5 pTM=0.367 ipTM=0.211 tol=6.2
2024-07-09 19:33:33,405 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.4 pTM=0.363 ipTM=0.215 tol=7.23
2024-07-09 19:33:41,554 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.1 pTM=0.369 ipTM=0.216 tol=6.92
2024-07-09 19:33:49,706 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.7 pTM=0.362 ipTM=0.219 tol=3.84
2024-07-09 19:33:57,853 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.4 pTM=0.367 ipTM=0.213 tol=5.65
2024-07-09 19:34:06,008 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=51.9 pTM=0.364 ipTM=0.217 tol=5.64
2024-07-09 19:34:14,157 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.2 pTM=0.37 ipTM=0.216 tol=3.24
2024-07-09 19:34:22,311 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.8 pTM=0.363 ipTM=0.216 tol=5.13
2024-07-09 19:34:30,457 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53 pTM=0.367 ipTM=0.219 tol=6.34
2024-07-09 19:34:38,607 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.3 pTM=0.363 ipTM=0.212 tol=3.41
2024-07-09 19:34:38,608 alphafold2_multimer_v3_model_4_seed_000 took 252.6s (30 recycles)
2024-07-09 19:34:47,018 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.5 pTM=0.359 ipTM=0.203
2024-07-09 19:34:55,184 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.1 pTM=0.344 ipTM=0.156 tol=15.7
2024-07-09 19:35:03,344 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.1 pTM=0.347 ipTM=0.171 tol=6.67
2024-07-09 19:35:11,525 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.2 pTM=0.347 ipTM=0.172 tol=6.61
2024-07-09 19:35:19,684 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.1 pTM=0.346 ipTM=0.17 tol=6.52
2024-07-09 19:35:27,837 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.1 pTM=0.349 ipTM=0.174 tol=4.67
2024-07-09 19:35:35,991 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52 pTM=0.346 ipTM=0.168 tol=5.05
2024-07-09 19:35:44,154 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.5 pTM=0.349 ipTM=0.177 tol=5.84
2024-07-09 19:35:52,315 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.3 pTM=0.347 ipTM=0.172 tol=5.96
2024-07-09 19:36:00,480 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.6 pTM=0.349 ipTM=0.181 tol=6.41
2024-07-09 19:36:08,639 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.6 pTM=0.346 ipTM=0.173 tol=2.59
2024-07-09 19:36:16,802 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.6 pTM=0.349 ipTM=0.182 tol=5.6
2024-07-09 19:36:24,958 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.3 pTM=0.347 ipTM=0.176 tol=2.57
2024-07-09 19:36:33,122 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.7 pTM=0.348 ipTM=0.181 tol=4.45
2024-07-09 19:36:41,273 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.3 pTM=0.347 ipTM=0.179 tol=2.39
2024-07-09 19:36:49,438 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.5 pTM=0.348 ipTM=0.181 tol=2.79
2024-07-09 19:36:57,602 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.7 pTM=0.347 ipTM=0.182 tol=3.87
2024-07-09 19:37:05,767 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.8 pTM=0.351 ipTM=0.184 tol=1.87
2024-07-09 19:37:13,929 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.6 pTM=0.347 ipTM=0.181 tol=5.54
2024-07-09 19:37:22,092 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.8 pTM=0.351 ipTM=0.183 tol=5.21
2024-07-09 19:37:30,273 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.5 pTM=0.347 ipTM=0.18 tol=4.74
2024-07-09 19:37:38,437 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.8 pTM=0.349 ipTM=0.18 tol=2.68
2024-07-09 19:37:46,594 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.5 pTM=0.346 ipTM=0.18 tol=5.03
2024-07-09 19:37:54,764 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.9 pTM=0.349 ipTM=0.181 tol=5.03
2024-07-09 19:38:02,923 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.6 pTM=0.347 ipTM=0.182 tol=6.9
2024-07-09 19:38:11,093 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.5 pTM=0.349 ipTM=0.18 tol=4.51
2024-07-09 19:38:19,259 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52.3 pTM=0.344 ipTM=0.178 tol=6.12
2024-07-09 19:38:27,427 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.6 pTM=0.349 ipTM=0.182 tol=7.99
2024-07-09 19:38:35,590 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.4 pTM=0.349 ipTM=0.186 tol=8.45
2024-07-09 19:38:43,760 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.6 pTM=0.35 ipTM=0.186 tol=2.55
2024-07-09 19:38:51,929 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.4 pTM=0.347 ipTM=0.184 tol=8.35
2024-07-09 19:38:51,930 alphafold2_multimer_v3_model_5_seed_000 took 253.1s (30 recycles)
2024-07-09 19:38:52,185 reranking models by 'multimer' metric
2024-07-09 19:38:55,003 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 19:39:34,788 Relaxation took 42.6s
2024-07-09 19:39:34,789 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.3 pTM=0.363 ipTM=0.212
2024-07-09 19:40:16,728 Relaxation took 41.9s
2024-07-09 19:40:16,728 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.8 pTM=0.354 ipTM=0.192
2024-07-09 19:40:54,568 Relaxation took 37.8s
2024-07-09 19:40:54,568 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.4 pTM=0.347 ipTM=0.184
2024-07-09 19:41:39,511 Relaxation took 44.9s
2024-07-09 19:41:39,511 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=51.9 pTM=0.352 ipTM=0.162
2024-07-09 19:42:25,352 Relaxation took 45.8s
2024-07-09 19:42:25,352 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.3 pTM=0.349 ipTM=0.129
2024-07-09 19:42:26,581 Done