2024-07-09 20:21:16,277 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 20:21:16,597 Running on GPU
2024-07-09 20:21:20,492 Found 6 citations for tools or databases
2024-07-09 20:21:20,493 Query 1/1: DPH6_PRKN (length 732)
2024-07-09 20:21:20,956 Sleeping for 7s. Reason: PENDING
2024-07-09 20:21:28,364 Sleeping for 6s. Reason: RUNNING
2024-07-09 20:21:35,929 Sleeping for 9s. Reason: RUNNING
2024-07-09 20:21:45,358 Sleeping for 10s. Reason: RUNNING
2024-07-09 20:21:55,798 Sleeping for 9s. Reason: RUNNING
2024-07-09 20:22:05,213 Sleeping for 7s. Reason: RUNNING
2024-07-09 20:22:12,643 Sleeping for 6s. Reason: RUNNING
2024-07-09 20:22:19,065 Sleeping for 10s. Reason: RUNNING
2024-07-09 20:22:29,484 Sleeping for 8s. Reason: RUNNING
2024-07-09 20:22:37,920 Sleeping for 7s. Reason: RUNNING
2024-07-09 20:22:45,343 Sleeping for 8s. Reason: RUNNING
2024-07-09 20:22:53,774 Sleeping for 6s. Reason: RUNNING
2024-07-09 20:23:08,503 Sleeping for 6s. Reason: PENDING
2024-07-09 20:23:15,536 Sleeping for 6s. Reason: RUNNING
2024-07-09 20:23:21,968 Sleeping for 8s. Reason: RUNNING
2024-07-09 20:23:30,384 Sleeping for 8s. Reason: RUNNING
2024-07-09 20:23:38,820 Sleeping for 5s. Reason: RUNNING
2024-07-09 20:23:44,228 Sleeping for 8s. Reason: RUNNING
2024-07-09 20:23:52,659 Sleeping for 10s. Reason: RUNNING
2024-07-09 20:24:05,753 Setting max_seq=508, max_extra_seq=2048
2024-07-09 20:26:22,413 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.6 pTM=0.454 ipTM=0.128
2024-07-09 20:26:32,972 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.4 pTM=0.443 ipTM=0.139 tol=8.52
2024-07-09 20:26:43,536 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.6 pTM=0.44 ipTM=0.138 tol=4.79
2024-07-09 20:26:54,104 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.3 pTM=0.441 ipTM=0.163 tol=2.44
2024-07-09 20:27:04,688 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.9 pTM=0.433 ipTM=0.143 tol=2.81
2024-07-09 20:27:15,299 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.2 pTM=0.438 ipTM=0.144 tol=3.76
2024-07-09 20:27:25,916 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.7 pTM=0.429 ipTM=0.136 tol=4.13
2024-07-09 20:27:36,528 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.2 pTM=0.434 ipTM=0.147 tol=6.54
2024-07-09 20:27:47,176 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.5 pTM=0.426 ipTM=0.125 tol=8.05
2024-07-09 20:27:57,794 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.7 pTM=0.422 ipTM=0.142 tol=5.04
2024-07-09 20:28:08,444 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.3 pTM=0.416 ipTM=0.13 tol=3.93
2024-07-09 20:28:19,080 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.4 pTM=0.415 ipTM=0.145 tol=4.68
2024-07-09 20:28:29,719 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.9 pTM=0.408 ipTM=0.133 tol=4.82
2024-07-09 20:28:40,345 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.1 pTM=0.414 ipTM=0.146 tol=5.07
2024-07-09 20:28:51,003 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.4 pTM=0.402 ipTM=0.132 tol=4.23
2024-07-09 20:29:01,652 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.9 pTM=0.409 ipTM=0.144 tol=5
2024-07-09 20:29:12,302 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.1 pTM=0.403 ipTM=0.131 tol=4.5
2024-07-09 20:29:22,946 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.3 pTM=0.413 ipTM=0.143 tol=6.34
2024-07-09 20:29:33,616 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.6 pTM=0.406 ipTM=0.133 tol=4.41
2024-07-09 20:29:44,265 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.1 pTM=0.412 ipTM=0.142 tol=2.55
2024-07-09 20:29:54,938 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.6 pTM=0.409 ipTM=0.131 tol=4.83
2024-07-09 20:30:05,600 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.7 pTM=0.412 ipTM=0.14 tol=3.01
2024-07-09 20:30:16,255 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.4 pTM=0.413 ipTM=0.133 tol=2.59
2024-07-09 20:30:26,922 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.9 pTM=0.406 ipTM=0.14 tol=2.38
2024-07-09 20:30:37,595 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67 pTM=0.406 ipTM=0.131 tol=2.13
2024-07-09 20:30:48,265 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.7 pTM=0.401 ipTM=0.14 tol=2.33
2024-07-09 20:30:58,935 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.8 pTM=0.4 ipTM=0.129 tol=2.47
2024-07-09 20:31:09,587 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67 pTM=0.405 ipTM=0.143 tol=2.22
2024-07-09 20:31:20,256 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.6 pTM=0.404 ipTM=0.13 tol=2.06
2024-07-09 20:31:30,915 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.8 pTM=0.412 ipTM=0.146 tol=1.77
2024-07-09 20:31:41,593 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.7 pTM=0.401 ipTM=0.126 tol=3.44
2024-07-09 20:31:41,593 alphafold2_multimer_v3_model_1_seed_000 took 450.6s (30 recycles)
2024-07-09 20:31:52,609 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.3 pTM=0.444 ipTM=0.129
2024-07-09 20:32:03,245 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.7 pTM=0.453 ipTM=0.193 tol=13.3
2024-07-09 20:32:13,940 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.1 pTM=0.41 ipTM=0.122 tol=10
2024-07-09 20:32:24,594 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.6 pTM=0.438 ipTM=0.164 tol=8.3
2024-07-09 20:32:35,264 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.2 pTM=0.415 ipTM=0.137 tol=13.6
2024-07-09 20:32:45,931 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.9 pTM=0.424 ipTM=0.131 tol=2.44
2024-07-09 20:32:56,595 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.9 pTM=0.424 ipTM=0.136 tol=2.98
2024-07-09 20:33:07,268 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=70.4 pTM=0.437 ipTM=0.134 tol=4.98
2024-07-09 20:33:17,949 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.3 pTM=0.438 ipTM=0.134 tol=2.83
2024-07-09 20:33:28,608 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.9 pTM=0.437 ipTM=0.136 tol=1.48
2024-07-09 20:33:39,278 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.8 pTM=0.434 ipTM=0.132 tol=1.18
2024-07-09 20:33:49,935 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.1 pTM=0.436 ipTM=0.141 tol=1.18
2024-07-09 20:34:00,593 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.2 pTM=0.435 ipTM=0.135 tol=1.39
2024-07-09 20:34:11,262 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.3 pTM=0.438 ipTM=0.138 tol=1.46
2024-07-09 20:34:21,929 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70 pTM=0.435 ipTM=0.134 tol=1.31
2024-07-09 20:34:32,598 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.1 pTM=0.434 ipTM=0.137 tol=1.56
2024-07-09 20:34:43,271 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.8 pTM=0.438 ipTM=0.136 tol=1.75
2024-07-09 20:34:53,933 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.8 pTM=0.439 ipTM=0.138 tol=2.27
2024-07-09 20:35:04,607 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.8 pTM=0.438 ipTM=0.137 tol=1.16
2024-07-09 20:35:15,266 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.1 pTM=0.442 ipTM=0.139 tol=0.737
2024-07-09 20:35:25,933 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.8 pTM=0.447 ipTM=0.141 tol=7.25
2024-07-09 20:35:36,600 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.9 pTM=0.438 ipTM=0.131 tol=4.11
2024-07-09 20:35:47,252 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.2 pTM=0.444 ipTM=0.137 tol=3.31
2024-07-09 20:35:57,924 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.9 pTM=0.434 ipTM=0.131 tol=1.45
2024-07-09 20:36:08,590 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.8 pTM=0.436 ipTM=0.136 tol=1.21
2024-07-09 20:36:19,252 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.1 pTM=0.424 ipTM=0.126 tol=4.12
2024-07-09 20:36:29,909 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.3 pTM=0.427 ipTM=0.137 tol=1.57
2024-07-09 20:36:40,574 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.5 pTM=0.431 ipTM=0.136 tol=1.59
2024-07-09 20:36:51,225 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.2 pTM=0.428 ipTM=0.137 tol=0.798
2024-07-09 20:37:01,892 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.6 pTM=0.435 ipTM=0.134 tol=1.66
2024-07-09 20:37:12,557 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.1 pTM=0.429 ipTM=0.137 tol=1.6
2024-07-09 20:37:12,558 alphafold2_multimer_v3_model_2_seed_000 took 330.6s (30 recycles)
2024-07-09 20:37:23,561 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.7 pTM=0.469 ipTM=0.146
2024-07-09 20:37:34,222 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68 pTM=0.438 ipTM=0.136 tol=7.88
2024-07-09 20:37:44,892 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.2 pTM=0.442 ipTM=0.134 tol=12.5
2024-07-09 20:37:55,557 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.9 pTM=0.44 ipTM=0.14 tol=3.97
2024-07-09 20:38:06,235 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=69.2 pTM=0.44 ipTM=0.134 tol=9.81
2024-07-09 20:38:16,891 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.3 pTM=0.446 ipTM=0.142 tol=7.89
2024-07-09 20:38:27,557 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.2 pTM=0.455 ipTM=0.138 tol=3.89
2024-07-09 20:38:38,225 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.4 pTM=0.459 ipTM=0.155 tol=2.41
2024-07-09 20:38:48,906 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.6 pTM=0.46 ipTM=0.135 tol=11.3
2024-07-09 20:38:59,598 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.5 pTM=0.45 ipTM=0.128 tol=8.23
2024-07-09 20:39:10,262 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.4 pTM=0.451 ipTM=0.136 tol=4.11
2024-07-09 20:39:20,939 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.2 pTM=0.448 ipTM=0.136 tol=1.09
2024-07-09 20:39:31,603 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.9 pTM=0.447 ipTM=0.136 tol=2.77
2024-07-09 20:39:42,278 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.2 pTM=0.457 ipTM=0.137 tol=5.67
2024-07-09 20:39:52,926 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.4 pTM=0.48 ipTM=0.206 tol=2.93
2024-07-09 20:40:03,618 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.8 pTM=0.455 ipTM=0.134 tol=2.4
2024-07-09 20:40:14,304 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.1 pTM=0.447 ipTM=0.135 tol=8.11
2024-07-09 20:40:24,987 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.7 pTM=0.46 ipTM=0.147 tol=7.33
2024-07-09 20:40:35,670 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.8 pTM=0.452 ipTM=0.136 tol=10.4
2024-07-09 20:40:46,343 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.7 pTM=0.453 ipTM=0.136 tol=7.51
2024-07-09 20:40:57,023 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.2 pTM=0.455 ipTM=0.132 tol=2.26
2024-07-09 20:41:07,704 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.1 pTM=0.449 ipTM=0.137 tol=2.25
2024-07-09 20:41:18,378 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.2 pTM=0.45 ipTM=0.133 tol=0.773
2024-07-09 20:41:29,059 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70 pTM=0.455 ipTM=0.143 tol=2.87
2024-07-09 20:41:39,745 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.1 pTM=0.447 ipTM=0.131 tol=3.59
2024-07-09 20:41:50,421 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.6 pTM=0.447 ipTM=0.134 tol=2.33
2024-07-09 20:42:01,104 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.4 pTM=0.444 ipTM=0.138 tol=2.23
2024-07-09 20:42:11,783 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.9 pTM=0.447 ipTM=0.137 tol=2.23
2024-07-09 20:42:22,454 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.5 pTM=0.444 ipTM=0.139 tol=2.83
2024-07-09 20:42:33,129 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.4 pTM=0.45 ipTM=0.14 tol=3.54
2024-07-09 20:42:43,817 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.2 pTM=0.44 ipTM=0.133 tol=4.36
2024-07-09 20:42:43,818 alphafold2_multimer_v3_model_3_seed_000 took 330.9s (30 recycles)
2024-07-09 20:42:54,837 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.8 pTM=0.441 ipTM=0.149
2024-07-09 20:43:05,521 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.6 pTM=0.423 ipTM=0.146 tol=10.1
2024-07-09 20:43:16,183 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.8 pTM=0.47 ipTM=0.365 tol=17.6
2024-07-09 20:43:26,861 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.1 pTM=0.428 ipTM=0.14 tol=16.3
2024-07-09 20:43:37,542 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.2 pTM=0.429 ipTM=0.146 tol=6.2
2024-07-09 20:43:48,227 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.7 pTM=0.435 ipTM=0.145 tol=4.82
2024-07-09 20:43:58,902 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.8 pTM=0.438 ipTM=0.148 tol=3.19
2024-07-09 20:44:09,578 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69 pTM=0.436 ipTM=0.146 tol=2.09
2024-07-09 20:44:20,259 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.1 pTM=0.439 ipTM=0.144 tol=1.18
2024-07-09 20:44:30,936 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69 pTM=0.436 ipTM=0.145 tol=1.23
2024-07-09 20:44:41,599 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.9 pTM=0.433 ipTM=0.141 tol=0.826
2024-07-09 20:44:52,274 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.5 pTM=0.43 ipTM=0.141 tol=2.34
2024-07-09 20:45:02,946 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.8 pTM=0.436 ipTM=0.144 tol=2.58
2024-07-09 20:45:13,628 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.4 pTM=0.439 ipTM=0.141 tol=1.7
2024-07-09 20:45:24,295 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.2 pTM=0.436 ipTM=0.142 tol=1.37
2024-07-09 20:45:34,974 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.9 pTM=0.435 ipTM=0.142 tol=1.31
2024-07-09 20:45:45,637 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.4 pTM=0.428 ipTM=0.141 tol=3.84
2024-07-09 20:45:56,318 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.9 pTM=0.434 ipTM=0.139 tol=2.04
2024-07-09 20:46:06,993 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.9 pTM=0.446 ipTM=0.14 tol=2.28
2024-07-09 20:46:17,675 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.4 pTM=0.44 ipTM=0.141 tol=1.9
2024-07-09 20:46:28,360 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.3 pTM=0.439 ipTM=0.141 tol=1.39
2024-07-09 20:46:39,027 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.8 pTM=0.444 ipTM=0.139 tol=0.77
2024-07-09 20:46:49,699 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.7 pTM=0.439 ipTM=0.144 tol=1.39
2024-07-09 20:47:00,361 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.1 pTM=0.445 ipTM=0.152 tol=2.46
2024-07-09 20:47:11,046 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.6 pTM=0.438 ipTM=0.129 tol=2.65
2024-07-09 20:47:21,709 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.8 pTM=0.433 ipTM=0.141 tol=2.11
2024-07-09 20:47:32,383 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.6 pTM=0.44 ipTM=0.147 tol=8.14
2024-07-09 20:47:43,072 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.4 pTM=0.439 ipTM=0.133 tol=7.1
2024-07-09 20:47:53,731 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.4 pTM=0.451 ipTM=0.15 tol=3.3
2024-07-09 20:48:04,394 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.1 pTM=0.438 ipTM=0.137 tol=1.93
2024-07-09 20:48:15,060 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69 pTM=0.433 ipTM=0.141 tol=1.54
2024-07-09 20:48:15,061 alphafold2_multimer_v3_model_4_seed_000 took 330.9s (30 recycles)
2024-07-09 20:48:26,068 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.4 pTM=0.529 ipTM=0.306
2024-07-09 20:48:36,738 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.5 pTM=0.454 ipTM=0.142 tol=18.4
2024-07-09 20:48:47,411 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.7 pTM=0.449 ipTM=0.134 tol=14.6
2024-07-09 20:48:58,089 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.6 pTM=0.462 ipTM=0.138 tol=3.67
2024-07-09 20:49:08,781 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.1 pTM=0.453 ipTM=0.13 tol=5.62
2024-07-09 20:49:19,467 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.4 pTM=0.454 ipTM=0.134 tol=2.47
2024-07-09 20:49:30,144 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.4 pTM=0.449 ipTM=0.13 tol=2.17
2024-07-09 20:49:40,829 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.3 pTM=0.455 ipTM=0.13 tol=2.93
2024-07-09 20:49:51,494 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.2 pTM=0.454 ipTM=0.134 tol=2.89
2024-07-09 20:50:02,172 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.8 pTM=0.443 ipTM=0.13 tol=2.53
2024-07-09 20:50:12,845 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.8 pTM=0.449 ipTM=0.136 tol=2.25
2024-07-09 20:50:23,519 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.6 pTM=0.447 ipTM=0.13 tol=1.64
2024-07-09 20:50:34,182 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.8 pTM=0.446 ipTM=0.13 tol=1.68
2024-07-09 20:50:44,852 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.8 pTM=0.448 ipTM=0.13 tol=2.27
2024-07-09 20:50:55,523 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.9 pTM=0.45 ipTM=0.132 tol=1.62
2024-07-09 20:51:06,184 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.3 pTM=0.445 ipTM=0.13 tol=1.85
2024-07-09 20:51:16,852 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.6 pTM=0.443 ipTM=0.13 tol=1.76
2024-07-09 20:51:27,526 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.7 pTM=0.451 ipTM=0.129 tol=2.71
2024-07-09 20:51:38,201 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.5 pTM=0.453 ipTM=0.128 tol=1.88
2024-07-09 20:51:48,884 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.8 pTM=0.453 ipTM=0.136 tol=1.81
2024-07-09 20:51:59,560 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.4 pTM=0.447 ipTM=0.123 tol=2.69
2024-07-09 20:52:10,233 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.2 pTM=0.453 ipTM=0.134 tol=1.94
2024-07-09 20:52:20,912 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.4 pTM=0.448 ipTM=0.12 tol=1.6
2024-07-09 20:52:31,576 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.9 pTM=0.454 ipTM=0.141 tol=2.85
2024-07-09 20:52:42,273 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.5 pTM=0.441 ipTM=0.119 tol=11.4
2024-07-09 20:52:52,952 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.9 pTM=0.447 ipTM=0.134 tol=8.93
2024-07-09 20:53:03,626 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.4 pTM=0.445 ipTM=0.122 tol=5.25
2024-07-09 20:53:14,293 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.7 pTM=0.447 ipTM=0.13 tol=3.42
2024-07-09 20:53:24,987 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.4 pTM=0.442 ipTM=0.122 tol=6.38
2024-07-09 20:53:35,661 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.6 pTM=0.443 ipTM=0.134 tol=3.02
2024-07-09 20:53:46,343 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.8 pTM=0.442 ipTM=0.128 tol=4.44
2024-07-09 20:53:46,343 alphafold2_multimer_v3_model_5_seed_000 took 330.9s (30 recycles)
2024-07-09 20:53:46,685 reranking models by 'multimer' metric
2024-07-09 20:53:49,920 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-09 21:02:35,272 Relaxation took 528.6s
2024-07-09 21:02:35,273 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69 pTM=0.433 ipTM=0.141
2024-07-09 21:03:30,206 Relaxation took 54.9s
2024-07-09 21:03:30,206 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.1 pTM=0.429 ipTM=0.137
2024-07-09 21:04:19,971 Relaxation took 49.8s
2024-07-09 21:04:19,971 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.2 pTM=0.44 ipTM=0.133
2024-07-09 21:05:04,440 Relaxation took 44.5s
2024-07-09 21:05:04,440 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.8 pTM=0.442 ipTM=0.128
2024-07-09 21:06:11,411 Relaxation took 67.0s
2024-07-09 21:06:11,411 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.7 pTM=0.401 ipTM=0.126
2024-07-09 21:06:12,733 Done