2024-07-09 20:39:28,313 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-09 20:39:28,623 Running on GPU
2024-07-09 20:39:30,891 Found 6 citations for tools or databases
2024-07-09 20:39:30,892 Query 1/1: DUS28_APC1 (length 2120)
2024-07-09 20:39:31,829 Sleeping for 10s. Reason: PENDING
2024-07-09 20:39:42,244 Sleeping for 7s. Reason: RUNNING
2024-07-09 20:39:49,675 Sleeping for 9s. Reason: RUNNING
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2024-07-09 20:40:18,875 Sleeping for 8s. Reason: RUNNING
2024-07-09 20:40:27,297 Sleeping for 9s. Reason: RUNNING
2024-07-09 20:40:36,889 Sleeping for 10s. Reason: RUNNING
2024-07-09 20:40:47,316 Sleeping for 5s. Reason: RUNNING
2024-07-09 20:40:52,726 Sleeping for 10s. Reason: RUNNING
2024-07-09 20:41:03,166 Sleeping for 8s. Reason: RUNNING
2024-07-09 20:41:11,589 Sleeping for 8s. Reason: RUNNING
2024-07-09 20:41:20,010 Sleeping for 10s. Reason: RUNNING
2024-07-09 20:41:30,437 Sleeping for 9s. Reason: RUNNING
2024-07-09 20:41:40,008 Sleeping for 9s. Reason: RUNNING
2024-07-09 20:41:49,443 Sleeping for 7s. Reason: RUNNING
2024-07-09 20:41:59,786 Sleeping for 5s. Reason: PENDING
2024-07-09 20:42:05,188 Sleeping for 8s. Reason: RUNNING
2024-07-09 20:42:13,599 Sleeping for 5s. Reason: RUNNING
2024-07-09 20:42:19,009 Sleeping for 7s. Reason: RUNNING
2024-07-09 20:42:26,421 Sleeping for 7s. Reason: RUNNING
2024-07-09 20:42:33,859 Sleeping for 6s. Reason: RUNNING
2024-07-09 20:42:40,266 Sleeping for 5s. Reason: RUNNING
2024-07-09 20:42:45,680 Sleeping for 9s. Reason: RUNNING
2024-07-09 20:42:55,098 Sleeping for 6s. Reason: RUNNING
2024-07-09 20:43:01,529 Sleeping for 10s. Reason: RUNNING
2024-07-09 20:43:12,467 Sleeping for 8s. Reason: RUNNING
2024-07-09 20:43:20,897 Sleeping for 9s. Reason: RUNNING
2024-07-09 20:43:30,315 Sleeping for 6s. Reason: RUNNING
2024-07-09 20:43:36,721 Sleeping for 10s. Reason: RUNNING
2024-07-09 20:43:56,441 Setting max_seq=508, max_extra_seq=2048
2024-07-09 20:48:57,782 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.6 pTM=0.639 ipTM=0.203
2024-07-09 20:51:58,145 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.1 pTM=0.641 ipTM=0.198 tol=6.07
2024-07-09 20:54:58,476 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.6 pTM=0.642 ipTM=0.208 tol=3.96
2024-07-09 20:57:58,800 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73 pTM=0.647 ipTM=0.213 tol=1.64
2024-07-09 21:00:59,140 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.1 pTM=0.65 ipTM=0.214 tol=1.88
2024-07-09 21:03:59,515 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.2 pTM=0.651 ipTM=0.226 tol=3.22
2024-07-09 21:06:59,831 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.1 pTM=0.654 ipTM=0.223 tol=2.09
2024-07-09 21:10:00,191 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.2 pTM=0.653 ipTM=0.223 tol=1.91
2024-07-09 21:13:00,563 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.6 pTM=0.655 ipTM=0.238 tol=2.54
2024-07-09 21:16:00,919 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.6 pTM=0.657 ipTM=0.282 tol=1.8
2024-07-09 21:19:01,250 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.7 pTM=0.66 ipTM=0.335 tol=2.86
2024-07-09 21:22:01,564 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.8 pTM=0.66 ipTM=0.37 tol=3.32
2024-07-09 21:25:01,839 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.8 pTM=0.659 ipTM=0.396 tol=2.01
2024-07-09 21:28:02,124 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.8 pTM=0.659 ipTM=0.386 tol=2.64
2024-07-09 21:31:02,416 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.9 pTM=0.659 ipTM=0.388 tol=2.07
2024-07-09 21:34:02,688 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.6 pTM=0.66 ipTM=0.402 tol=3.79
2024-07-09 21:37:02,970 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.8 pTM=0.656 ipTM=0.446 tol=3.55
2024-07-09 21:40:03,273 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.8 pTM=0.66 ipTM=0.45 tol=1.25
2024-07-09 21:43:03,676 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.9 pTM=0.661 ipTM=0.444 tol=2.61
2024-07-09 21:46:03,997 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.8 pTM=0.662 ipTM=0.436 tol=2.46
2024-07-09 21:49:04,305 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.6 pTM=0.659 ipTM=0.429 tol=1.61
2024-07-09 21:52:04,635 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.8 pTM=0.659 ipTM=0.414 tol=2.21
2024-07-09 21:55:04,971 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.9 pTM=0.657 ipTM=0.418 tol=0.852
2024-07-09 21:58:05,273 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.7 pTM=0.661 ipTM=0.378 tol=2.99
2024-07-09 22:01:05,565 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.8 pTM=0.662 ipTM=0.404 tol=3.03
2024-07-09 22:04:05,877 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.7 pTM=0.66 ipTM=0.407 tol=2.27
2024-07-09 22:07:06,184 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.6 pTM=0.654 ipTM=0.433 tol=1.79
2024-07-09 22:10:06,474 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.6 pTM=0.658 ipTM=0.445 tol=1.32
2024-07-09 22:13:06,727 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.8 pTM=0.662 ipTM=0.423 tol=2
2024-07-09 22:16:07,030 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.6 pTM=0.659 ipTM=0.377 tol=1.63
2024-07-09 22:19:07,345 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.6 pTM=0.657 ipTM=0.378 tol=2.03
2024-07-09 22:19:07,348 alphafold2_multimer_v3_model_1_seed_000 took 5707.3s (30 recycles)
2024-07-09 22:22:10,481 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.8 pTM=0.652 ipTM=0.206
2024-07-09 22:25:10,963 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71 pTM=0.653 ipTM=0.235 tol=5.71
2024-07-09 22:28:11,454 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.4 pTM=0.644 ipTM=0.21 tol=3.04
2024-07-09 22:31:11,983 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.1 pTM=0.654 ipTM=0.211 tol=1.6
2024-07-09 22:34:12,506 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.4 pTM=0.656 ipTM=0.216 tol=0.981
2024-07-09 22:37:13,010 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.6 pTM=0.662 ipTM=0.223 tol=1.09
2024-07-09 22:40:13,482 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.7 pTM=0.663 ipTM=0.23 tol=1.25
2024-07-09 22:43:13,932 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.7 pTM=0.663 ipTM=0.23 tol=0.771
2024-07-09 22:46:14,460 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.1 pTM=0.667 ipTM=0.231 tol=0.724
2024-07-09 22:49:14,876 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=72.8 pTM=0.665 ipTM=0.232 tol=0.817
2024-07-09 22:52:15,355 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.1 pTM=0.667 ipTM=0.227 tol=1.23
2024-07-09 22:55:15,793 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73 pTM=0.665 ipTM=0.227 tol=0.834
2024-07-09 22:58:16,211 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.9 pTM=0.665 ipTM=0.229 tol=0.775
2024-07-09 23:01:16,662 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.1 pTM=0.669 ipTM=0.238 tol=0.992
2024-07-09 23:04:17,121 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.9 pTM=0.667 ipTM=0.233 tol=0.723
2024-07-09 23:07:17,529 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.9 pTM=0.665 ipTM=0.234 tol=0.74
2024-07-09 23:10:17,971 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.2 pTM=0.667 ipTM=0.233 tol=0.739
2024-07-09 23:13:18,379 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.1 pTM=0.668 ipTM=0.236 tol=0.832
2024-07-09 23:16:18,820 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.2 pTM=0.671 ipTM=0.236 tol=0.764
2024-07-09 23:19:19,260 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.1 pTM=0.667 ipTM=0.233 tol=0.76
2024-07-09 23:22:19,679 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.8 pTM=0.662 ipTM=0.232 tol=0.758
2024-07-09 23:25:20,103 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.2 pTM=0.668 ipTM=0.234 tol=1.86
2024-07-09 23:28:20,526 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.2 pTM=0.666 ipTM=0.229 tol=0.783
2024-07-09 23:31:20,965 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.2 pTM=0.667 ipTM=0.23 tol=1.07
2024-07-09 23:34:21,389 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.4 pTM=0.672 ipTM=0.232 tol=0.883
2024-07-09 23:37:21,828 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.2 pTM=0.673 ipTM=0.242 tol=1.06
2024-07-09 23:40:22,250 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.2 pTM=0.665 ipTM=0.234 tol=0.73
2024-07-09 23:43:22,687 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.2 pTM=0.669 ipTM=0.237 tol=1.04
2024-07-09 23:46:23,125 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.2 pTM=0.668 ipTM=0.232 tol=0.832
2024-07-09 23:49:23,547 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.1 pTM=0.667 ipTM=0.234 tol=0.641
2024-07-09 23:52:23,969 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.1 pTM=0.666 ipTM=0.231 tol=0.727
2024-07-09 23:52:23,971 alphafold2_multimer_v3_model_2_seed_000 took 5594.0s (30 recycles)
2024-07-09 23:55:27,043 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=71.1 pTM=0.638 ipTM=0.214
2024-07-09 23:58:27,548 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.4 pTM=0.652 ipTM=0.197 tol=16
2024-07-10 00:01:27,961 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.9 pTM=0.665 ipTM=0.246 tol=5.03
2024-07-10 00:04:28,311 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.3 pTM=0.673 ipTM=0.294 tol=1.95
2024-07-10 00:07:28,630 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.2 pTM=0.678 ipTM=0.273 tol=0.859
2024-07-10 00:10:28,990 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.3 pTM=0.68 ipTM=0.271 tol=0.534
2024-07-10 00:13:29,366 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.5 pTM=0.681 ipTM=0.246 tol=0.848
2024-07-10 00:16:29,744 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.5 pTM=0.681 ipTM=0.246 tol=0.654
2024-07-10 00:19:30,108 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.5 pTM=0.679 ipTM=0.253 tol=1.14
2024-07-10 00:22:30,518 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.4 pTM=0.677 ipTM=0.215 tol=1.2
2024-07-10 00:25:30,929 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.7 pTM=0.682 ipTM=0.226 tol=0.783
2024-07-10 00:28:31,297 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.7 pTM=0.683 ipTM=0.215 tol=0.9
2024-07-10 00:31:31,698 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.6 pTM=0.681 ipTM=0.208 tol=1.22
2024-07-10 00:34:32,123 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.5 pTM=0.677 ipTM=0.198 tol=4.41
2024-07-10 00:37:32,520 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.7 pTM=0.683 ipTM=0.233 tol=7.82
2024-07-10 00:40:32,875 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.6 pTM=0.684 ipTM=0.234 tol=1.25
2024-07-10 00:43:33,225 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.8 pTM=0.686 ipTM=0.242 tol=1.27
2024-07-10 00:46:33,571 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.7 pTM=0.687 ipTM=0.248 tol=1.18
2024-07-10 00:49:33,942 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.8 pTM=0.689 ipTM=0.25 tol=1.08
2024-07-10 00:52:34,274 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.8 pTM=0.686 ipTM=0.246 tol=1.12
2024-07-10 00:55:34,593 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.8 pTM=0.688 ipTM=0.247 tol=1.02
2024-07-10 00:58:34,942 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.9 pTM=0.688 ipTM=0.244 tol=0.829
2024-07-10 01:01:35,288 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.7 pTM=0.684 ipTM=0.246 tol=0.595
2024-07-10 01:04:35,621 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.9 pTM=0.688 ipTM=0.248 tol=1.03
2024-07-10 01:07:35,913 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.8 pTM=0.687 ipTM=0.243 tol=0.89
2024-07-10 01:10:36,238 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.7 pTM=0.687 ipTM=0.246 tol=0.692
2024-07-10 01:13:36,554 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.7 pTM=0.682 ipTM=0.245 tol=0.839
2024-07-10 01:16:36,856 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.8 pTM=0.686 ipTM=0.247 tol=0.889
2024-07-10 01:19:37,182 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.8 pTM=0.688 ipTM=0.241 tol=0.895
2024-07-10 01:22:37,504 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.9 pTM=0.69 ipTM=0.243 tol=0.975
2024-07-10 01:25:37,793 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=73.7 pTM=0.686 ipTM=0.243 tol=0.759
2024-07-10 01:25:37,796 alphafold2_multimer_v3_model_3_seed_000 took 5591.3s (30 recycles)
2024-07-10 01:28:40,755 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.8 pTM=0.673 ipTM=0.209
2024-07-10 01:31:41,073 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=70.8 pTM=0.668 ipTM=0.203 tol=8.95
2024-07-10 01:34:41,341 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.6 pTM=0.673 ipTM=0.21 tol=3.67
2024-07-10 01:37:41,669 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.6 pTM=0.676 ipTM=0.209 tol=3.35
2024-07-10 01:40:42,004 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.6 pTM=0.677 ipTM=0.21 tol=2
2024-07-10 01:43:42,332 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.7 pTM=0.679 ipTM=0.21 tol=2.55
2024-07-10 01:46:42,654 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.9 pTM=0.684 ipTM=0.216 tol=2.67
2024-07-10 01:49:42,988 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.9 pTM=0.681 ipTM=0.215 tol=3.34
2024-07-10 01:52:43,324 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.8 pTM=0.684 ipTM=0.215 tol=2.15
2024-07-10 01:55:43,634 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.7 pTM=0.679 ipTM=0.212 tol=1.61
2024-07-10 01:58:43,939 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.8 pTM=0.681 ipTM=0.212 tol=1.87
2024-07-10 02:01:44,234 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.9 pTM=0.681 ipTM=0.218 tol=1.77
2024-07-10 02:04:44,529 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.9 pTM=0.682 ipTM=0.216 tol=1.89
2024-07-10 02:07:44,866 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.8 pTM=0.684 ipTM=0.217 tol=2.97
2024-07-10 02:10:45,189 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.8 pTM=0.682 ipTM=0.216 tol=1.76
2024-07-10 02:13:45,501 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.9 pTM=0.685 ipTM=0.214 tol=1.33
2024-07-10 02:16:45,820 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72 pTM=0.681 ipTM=0.216 tol=2.15
2024-07-10 02:19:46,151 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.9 pTM=0.683 ipTM=0.218 tol=2.65
2024-07-10 02:22:46,452 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.8 pTM=0.685 ipTM=0.22 tol=1.35
2024-07-10 02:25:46,752 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.8 pTM=0.681 ipTM=0.218 tol=1.79
2024-07-10 02:28:47,035 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.9 pTM=0.685 ipTM=0.219 tol=1.89
2024-07-10 02:31:47,361 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.9 pTM=0.684 ipTM=0.214 tol=1.53
2024-07-10 02:34:47,685 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.8 pTM=0.678 ipTM=0.22 tol=2.02
2024-07-10 02:37:48,035 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.9 pTM=0.685 ipTM=0.22 tol=1.5
2024-07-10 02:40:48,388 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.9 pTM=0.685 ipTM=0.22 tol=1.25
2024-07-10 02:43:48,727 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72 pTM=0.686 ipTM=0.221 tol=1.05
2024-07-10 02:46:49,083 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.8 pTM=0.679 ipTM=0.218 tol=0.847
2024-07-10 02:49:49,440 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.9 pTM=0.684 ipTM=0.221 tol=0.797
2024-07-10 02:52:49,742 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.9 pTM=0.683 ipTM=0.216 tol=1.79
2024-07-10 02:55:50,034 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.1 pTM=0.686 ipTM=0.219 tol=1.94
2024-07-10 02:58:50,329 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.8 pTM=0.682 ipTM=0.219 tol=1.04
2024-07-10 02:58:50,331 alphafold2_multimer_v3_model_4_seed_000 took 5590.0s (30 recycles)
2024-07-10 03:01:53,413 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.2 pTM=0.658 ipTM=0.202
2024-07-10 03:04:53,846 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.2 pTM=0.658 ipTM=0.212 tol=4.18
2024-07-10 03:07:54,265 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.6 pTM=0.66 ipTM=0.218 tol=3.71
2024-07-10 03:10:54,736 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.9 pTM=0.664 ipTM=0.211 tol=3.86
2024-07-10 03:13:55,186 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.9 pTM=0.667 ipTM=0.213 tol=1.67
2024-07-10 03:16:55,624 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.1 pTM=0.675 ipTM=0.219 tol=3.14
2024-07-10 03:19:56,070 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.8 pTM=0.678 ipTM=0.223 tol=13.5
2024-07-10 03:22:56,592 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.4 pTM=0.64 ipTM=0.205 tol=11.9
2024-07-10 03:25:57,080 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.6 pTM=0.662 ipTM=0.215 tol=8.48
2024-07-10 03:28:57,549 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.9 pTM=0.666 ipTM=0.213 tol=3.69
2024-07-10 03:31:58,053 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.3 pTM=0.671 ipTM=0.229 tol=2.6
2024-07-10 03:34:58,508 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.2 pTM=0.672 ipTM=0.226 tol=4.36
2024-07-10 03:37:58,935 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.2 pTM=0.673 ipTM=0.22 tol=3.09
2024-07-10 03:40:59,372 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.2 pTM=0.675 ipTM=0.214 tol=3.03
2024-07-10 03:43:59,790 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.3 pTM=0.676 ipTM=0.211 tol=1.83
2024-07-10 03:47:00,215 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.2 pTM=0.677 ipTM=0.209 tol=1.36
2024-07-10 03:50:00,681 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.4 pTM=0.676 ipTM=0.209 tol=0.919
2024-07-10 03:53:01,143 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.4 pTM=0.678 ipTM=0.212 tol=1.7
2024-07-10 03:56:01,630 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.2 pTM=0.681 ipTM=0.207 tol=1.42
2024-07-10 03:59:02,078 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.3 pTM=0.677 ipTM=0.211 tol=1.34
2024-07-10 04:02:02,468 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73.2 pTM=0.679 ipTM=0.211 tol=1.29
2024-07-10 04:05:02,912 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.5 pTM=0.682 ipTM=0.208 tol=0.885
2024-07-10 04:08:03,365 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.4 pTM=0.677 ipTM=0.207 tol=0.774
2024-07-10 04:11:03,843 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73.4 pTM=0.682 ipTM=0.214 tol=2.12
2024-07-10 04:14:04,309 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=73.4 pTM=0.683 ipTM=0.216 tol=1.04
2024-07-10 04:17:04,733 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=73.2 pTM=0.681 ipTM=0.212 tol=2.15
2024-07-10 04:20:05,186 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=73.4 pTM=0.676 ipTM=0.211 tol=1.97
2024-07-10 04:23:05,639 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.2 pTM=0.678 ipTM=0.208 tol=0.821
2024-07-10 04:26:06,079 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73.3 pTM=0.681 ipTM=0.203 tol=1.08
2024-07-10 04:29:06,534 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.4 pTM=0.68 ipTM=0.204 tol=0.92
2024-07-10 04:32:07,009 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.4 pTM=0.678 ipTM=0.208 tol=1.81
2024-07-10 04:32:07,012 alphafold2_multimer_v3_model_5_seed_000 took 5594.1s (30 recycles)
2024-07-10 04:32:09,585 reranking models by 'multimer' metric
2024-07-10 04:32:14,074 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 04:35:27,438 Relaxation took 197.9s
2024-07-10 04:35:27,439 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.6 pTM=0.657 ipTM=0.378
2024-07-10 04:39:53,544 Relaxation took 266.1s
2024-07-10 04:39:53,544 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.7 pTM=0.686 ipTM=0.243
2024-07-10 04:44:23,541 Relaxation took 270.0s
2024-07-10 04:44:23,541 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.1 pTM=0.666 ipTM=0.231
2024-07-10 04:48:43,004 Relaxation took 259.5s
2024-07-10 04:48:43,004 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.8 pTM=0.682 ipTM=0.219
2024-07-10 04:57:10,555 Relaxation took 507.5s
2024-07-10 04:57:10,555 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.4 pTM=0.678 ipTM=0.208
2024-07-10 04:57:16,199 Done