2024-07-09 21:06:49,979 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-09 21:06:50,306 Running on GPU 2024-07-09 21:06:54,064 Found 6 citations for tools or databases 2024-07-09 21:06:54,064 Query 1/1: ECHD3_RTRAF (length 547) 2024-07-09 21:06:54,522 Sleeping for 10s. Reason: PENDING 2024-07-09 21:07:04,966 Sleeping for 5s. Reason: RUNNING 2024-07-09 21:07:10,384 Sleeping for 7s. Reason: RUNNING 2024-07-09 21:07:17,810 Sleeping for 5s. Reason: RUNNING 2024-07-09 21:07:23,232 Sleeping for 7s. Reason: RUNNING 2024-07-09 21:07:30,657 Sleeping for 8s. Reason: RUNNING 2024-07-09 21:07:39,067 Sleeping for 7s. Reason: RUNNING 2024-07-09 21:07:46,493 Sleeping for 10s. Reason: RUNNING 2024-07-09 21:07:56,909 Sleeping for 10s. Reason: RUNNING 2024-07-09 21:08:07,349 Sleeping for 8s. Reason: RUNNING 2024-07-09 21:08:15,771 Sleeping for 5s. Reason: RUNNING 2024-07-09 21:08:21,194 Sleeping for 10s. Reason: RUNNING 2024-07-09 21:08:43,303 Sleeping for 7s. Reason: PENDING 2024-07-09 21:08:50,724 Sleeping for 9s. Reason: RUNNING 2024-07-09 21:09:00,133 Sleeping for 10s. Reason: RUNNING 2024-07-09 21:09:10,560 Sleeping for 9s. Reason: RUNNING 2024-07-09 21:09:19,979 Sleeping for 9s. Reason: RUNNING 2024-07-09 21:09:30,161 Sleeping for 6s. Reason: RUNNING 2024-07-09 21:09:36,797 Sleeping for 8s. Reason: RUNNING 2024-07-09 21:09:45,221 Sleeping for 6s. Reason: RUNNING 2024-07-09 21:09:51,638 Sleeping for 7s. Reason: RUNNING 2024-07-09 21:10:01,286 Setting max_seq=508, max_extra_seq=2048 2024-07-09 21:12:44,931 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.6 pTM=0.518 ipTM=0.132 2024-07-09 21:12:51,334 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75 pTM=0.526 ipTM=0.143 tol=4.77 2024-07-09 21:12:57,748 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.1 pTM=0.517 ipTM=0.12 tol=3.14 2024-07-09 21:13:04,173 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75.1 pTM=0.517 ipTM=0.122 tol=0.976 2024-07-09 21:13:10,612 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74.4 pTM=0.514 ipTM=0.114 tol=1.22 2024-07-09 21:13:17,051 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.6 pTM=0.515 ipTM=0.114 tol=1.28 2024-07-09 21:13:23,495 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.1 pTM=0.514 ipTM=0.112 tol=1.12 2024-07-09 21:13:29,940 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=74.1 pTM=0.514 ipTM=0.111 tol=2.71 2024-07-09 21:13:36,397 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.5 pTM=0.516 ipTM=0.113 tol=3.18 2024-07-09 21:13:42,846 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.1 pTM=0.515 ipTM=0.111 tol=2.06 2024-07-09 21:13:49,296 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.8 pTM=0.515 ipTM=0.111 tol=1.25 2024-07-09 21:13:55,749 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.5 pTM=0.515 ipTM=0.112 tol=1.49 2024-07-09 21:14:02,212 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.6 pTM=0.515 ipTM=0.112 tol=1.59 2024-07-09 21:14:08,677 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.2 pTM=0.515 ipTM=0.113 tol=1.68 2024-07-09 21:14:15,142 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.1 pTM=0.516 ipTM=0.114 tol=2.53 2024-07-09 21:14:21,601 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.1 pTM=0.515 ipTM=0.111 tol=3.02 2024-07-09 21:14:28,073 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.2 pTM=0.514 ipTM=0.11 tol=3.33 2024-07-09 21:14:34,536 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.9 pTM=0.514 ipTM=0.11 tol=3.15 2024-07-09 21:14:40,999 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.5 pTM=0.515 ipTM=0.112 tol=5.78 2024-07-09 21:14:47,469 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.6 pTM=0.516 ipTM=0.115 tol=3.11 2024-07-09 21:14:53,939 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.1 pTM=0.518 ipTM=0.119 tol=2.95 2024-07-09 21:15:00,404 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.1 pTM=0.518 ipTM=0.119 tol=2.01 2024-07-09 21:15:06,878 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.4 pTM=0.517 ipTM=0.116 tol=1.62 2024-07-09 21:15:13,347 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.3 pTM=0.516 ipTM=0.115 tol=1.01 2024-07-09 21:15:19,821 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.5 pTM=0.515 ipTM=0.112 tol=3.12 2024-07-09 21:15:26,289 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.4 pTM=0.516 ipTM=0.116 tol=2.75 2024-07-09 21:15:32,762 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.3 pTM=0.516 ipTM=0.115 tol=1.68 2024-07-09 21:15:39,231 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.5 pTM=0.517 ipTM=0.119 tol=1.91 2024-07-09 21:15:45,702 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.1 pTM=0.518 ipTM=0.121 tol=3.03 2024-07-09 21:15:52,172 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74.3 pTM=0.517 ipTM=0.12 tol=1.41 2024-07-09 21:15:58,642 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.3 pTM=0.516 ipTM=0.118 tol=0.923 2024-07-09 21:15:58,642 alphafold2_multimer_v3_model_1_seed_000 took 351.7s (30 recycles) 2024-07-09 21:16:05,281 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.9 pTM=0.506 ipTM=0.104 2024-07-09 21:16:11,752 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.6 pTM=0.515 ipTM=0.12 tol=9.77 2024-07-09 21:16:18,223 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.6 pTM=0.514 ipTM=0.119 tol=4.03 2024-07-09 21:16:24,703 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.2 pTM=0.514 ipTM=0.118 tol=2.23 2024-07-09 21:16:31,183 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=75.1 pTM=0.511 ipTM=0.113 tol=1.37 2024-07-09 21:16:37,672 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.1 pTM=0.509 ipTM=0.106 tol=2.93 2024-07-09 21:16:44,164 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75.1 pTM=0.509 ipTM=0.104 tol=3.3 2024-07-09 21:16:50,659 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.9 pTM=0.51 ipTM=0.105 tol=4.95 2024-07-09 21:16:57,157 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=75 pTM=0.512 ipTM=0.109 tol=3.21 2024-07-09 21:17:03,654 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.1 pTM=0.513 ipTM=0.112 tol=3.27 2024-07-09 21:17:10,144 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.1 pTM=0.511 ipTM=0.11 tol=3.21 2024-07-09 21:17:16,635 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.7 pTM=0.514 ipTM=0.115 tol=2.95 2024-07-09 21:17:23,131 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.4 pTM=0.516 ipTM=0.117 tol=4.07 2024-07-09 21:17:29,626 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.6 pTM=0.516 ipTM=0.116 tol=4.5 2024-07-09 21:17:36,118 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.2 pTM=0.515 ipTM=0.116 tol=3.36 2024-07-09 21:17:42,612 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.1 pTM=0.513 ipTM=0.111 tol=3.23 2024-07-09 21:17:49,104 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.4 pTM=0.511 ipTM=0.105 tol=2.89 2024-07-09 21:17:55,596 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.5 pTM=0.512 ipTM=0.107 tol=2.95 2024-07-09 21:18:02,094 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.8 pTM=0.512 ipTM=0.107 tol=2.12 2024-07-09 21:18:08,585 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.1 pTM=0.512 ipTM=0.108 tol=2.2 2024-07-09 21:18:15,074 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.2 pTM=0.513 ipTM=0.11 tol=2.1 2024-07-09 21:18:21,565 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.3 pTM=0.512 ipTM=0.107 tol=2.09 2024-07-09 21:18:28,063 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.6 pTM=0.51 ipTM=0.104 tol=2.96 2024-07-09 21:18:34,562 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.8 pTM=0.508 ipTM=0.101 tol=2.21 2024-07-09 21:18:41,059 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.7 pTM=0.507 ipTM=0.099 tol=6.34 2024-07-09 21:18:47,549 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.4 pTM=0.508 ipTM=0.103 tol=2.97 2024-07-09 21:18:54,037 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.2 pTM=0.51 ipTM=0.106 tol=6.14 2024-07-09 21:19:00,531 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.8 pTM=0.512 ipTM=0.112 tol=4.87 2024-07-09 21:19:07,023 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.6 pTM=0.512 ipTM=0.115 tol=2.7 2024-07-09 21:19:13,512 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.6 pTM=0.515 ipTM=0.118 tol=7.82 2024-07-09 21:19:20,001 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.9 pTM=0.515 ipTM=0.117 tol=4.95 2024-07-09 21:19:20,002 alphafold2_multimer_v3_model_2_seed_000 took 201.2s (30 recycles) 2024-07-09 21:19:26,675 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=74.7 pTM=0.507 ipTM=0.103 2024-07-09 21:19:33,190 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.4 pTM=0.512 ipTM=0.106 tol=12.5 2024-07-09 21:19:39,683 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.8 pTM=0.514 ipTM=0.112 tol=7.22 2024-07-09 21:19:46,183 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.1 pTM=0.514 ipTM=0.11 tol=3.26 2024-07-09 21:19:52,681 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.2 pTM=0.513 ipTM=0.108 tol=1.92 2024-07-09 21:19:59,180 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.2 pTM=0.512 ipTM=0.106 tol=0.868 2024-07-09 21:20:05,685 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73 pTM=0.511 ipTM=0.102 tol=1.59 2024-07-09 21:20:12,191 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.1 pTM=0.511 ipTM=0.102 tol=2.14 2024-07-09 21:20:18,710 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.9 pTM=0.509 ipTM=0.108 tol=4.2 2024-07-09 21:20:25,224 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.1 pTM=0.508 ipTM=0.108 tol=2.5 2024-07-09 21:20:31,745 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.8 pTM=0.509 ipTM=0.104 tol=2.2 2024-07-09 21:20:38,266 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.7 pTM=0.509 ipTM=0.102 tol=2.37 2024-07-09 21:20:44,787 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.4 pTM=0.51 ipTM=0.102 tol=2.7 2024-07-09 21:20:51,309 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.1 pTM=0.511 ipTM=0.104 tol=1.29 2024-07-09 21:20:57,836 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.2 pTM=0.51 ipTM=0.104 tol=2.39 2024-07-09 21:21:04,353 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.1 pTM=0.512 ipTM=0.106 tol=1.68 2024-07-09 21:21:10,883 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.1 pTM=0.51 ipTM=0.106 tol=2.67 2024-07-09 21:21:17,403 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.6 pTM=0.511 ipTM=0.105 tol=1.98 2024-07-09 21:21:23,927 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.8 pTM=0.51 ipTM=0.105 tol=1.82 2024-07-09 21:21:30,448 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.1 pTM=0.512 ipTM=0.106 tol=2.42 2024-07-09 21:21:36,971 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.2 pTM=0.51 ipTM=0.103 tol=2.3 2024-07-09 21:21:43,485 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.2 pTM=0.511 ipTM=0.108 tol=1.56 2024-07-09 21:21:50,001 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.3 pTM=0.51 ipTM=0.105 tol=1.42 2024-07-09 21:21:56,518 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.2 pTM=0.512 ipTM=0.105 tol=1.17 2024-07-09 21:22:03,040 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.5 pTM=0.51 ipTM=0.104 tol=0.796 2024-07-09 21:22:09,557 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72.6 pTM=0.51 ipTM=0.107 tol=1.18 2024-07-09 21:22:16,078 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.3 pTM=0.51 ipTM=0.107 tol=1.96 2024-07-09 21:22:22,597 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.1 pTM=0.511 ipTM=0.106 tol=1.73 2024-07-09 21:22:29,115 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.1 pTM=0.51 ipTM=0.108 tol=1.36 2024-07-09 21:22:35,632 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.1 pTM=0.51 ipTM=0.107 tol=1.19 2024-07-09 21:22:42,150 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72 pTM=0.51 ipTM=0.108 tol=1.03 2024-07-09 21:22:42,151 alphafold2_multimer_v3_model_3_seed_000 took 202.0s (30 recycles) 2024-07-09 21:22:48,747 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.7 pTM=0.493 ipTM=0.0997 2024-07-09 21:22:55,244 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.9 pTM=0.513 ipTM=0.116 tol=6.04 2024-07-09 21:23:01,737 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.6 pTM=0.51 ipTM=0.106 tol=4.41 2024-07-09 21:23:08,230 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.1 pTM=0.51 ipTM=0.1 tol=2.67 2024-07-09 21:23:14,725 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.4 pTM=0.513 ipTM=0.107 tol=2.36 2024-07-09 21:23:21,219 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.2 pTM=0.516 ipTM=0.115 tol=1.03 2024-07-09 21:23:27,717 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.9 pTM=0.514 ipTM=0.111 tol=1.51 2024-07-09 21:23:34,220 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.3 pTM=0.515 ipTM=0.112 tol=2.01 2024-07-09 21:23:40,728 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.2 pTM=0.516 ipTM=0.116 tol=3.12 2024-07-09 21:23:47,232 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.3 pTM=0.515 ipTM=0.112 tol=4.22 2024-07-09 21:23:53,746 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.2 pTM=0.518 ipTM=0.121 tol=3.58 2024-07-09 21:24:00,246 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71 pTM=0.519 ipTM=0.122 tol=2.21 2024-07-09 21:24:06,745 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.6 pTM=0.517 ipTM=0.118 tol=2.28 2024-07-09 21:24:13,243 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.6 pTM=0.518 ipTM=0.121 tol=2.21 2024-07-09 21:24:19,740 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.4 pTM=0.518 ipTM=0.121 tol=3.17 2024-07-09 21:24:26,236 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.1 pTM=0.519 ipTM=0.123 tol=2.23 2024-07-09 21:24:32,738 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.2 pTM=0.518 ipTM=0.121 tol=1.63 2024-07-09 21:24:39,242 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.9 pTM=0.517 ipTM=0.118 tol=1.58 2024-07-09 21:24:45,739 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.3 pTM=0.518 ipTM=0.12 tol=1.52 2024-07-09 21:24:52,234 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.3 pTM=0.518 ipTM=0.121 tol=1.39 2024-07-09 21:24:58,732 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70 pTM=0.518 ipTM=0.12 tol=1.3 2024-07-09 21:25:05,230 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70 pTM=0.518 ipTM=0.12 tol=2.45 2024-07-09 21:25:11,726 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.5 pTM=0.517 ipTM=0.118 tol=2.12 2024-07-09 21:25:18,223 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.4 pTM=0.517 ipTM=0.117 tol=0.961 2024-07-09 21:25:24,717 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.7 pTM=0.517 ipTM=0.119 tol=1.31 2024-07-09 21:25:31,209 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.6 pTM=0.518 ipTM=0.121 tol=0.744 2024-07-09 21:25:37,700 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.3 pTM=0.517 ipTM=0.118 tol=1.1 2024-07-09 21:25:44,190 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.1 pTM=0.519 ipTM=0.122 tol=1.25 2024-07-09 21:25:50,684 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.6 pTM=0.519 ipTM=0.122 tol=1.16 2024-07-09 21:25:57,174 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.4 pTM=0.518 ipTM=0.12 tol=1.29 2024-07-09 21:26:03,667 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.3 pTM=0.517 ipTM=0.118 tol=1.45 2024-07-09 21:26:03,668 alphafold2_multimer_v3_model_4_seed_000 took 201.3s (30 recycles) 2024-07-09 21:26:10,322 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.1 pTM=0.522 ipTM=0.155 2024-07-09 21:26:16,822 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71.4 pTM=0.523 ipTM=0.137 tol=5.77 2024-07-09 21:26:23,321 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.2 pTM=0.524 ipTM=0.138 tol=3.02 2024-07-09 21:26:29,825 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.6 pTM=0.527 ipTM=0.144 tol=3.15 2024-07-09 21:26:36,325 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.3 pTM=0.521 ipTM=0.13 tol=2.9 2024-07-09 21:26:42,824 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=71.6 pTM=0.524 ipTM=0.138 tol=2.87 2024-07-09 21:26:49,328 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.3 pTM=0.519 ipTM=0.124 tol=1.81 2024-07-09 21:26:55,826 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.8 pTM=0.521 ipTM=0.132 tol=1.88 2024-07-09 21:27:02,332 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.5 pTM=0.517 ipTM=0.118 tol=2.36 2024-07-09 21:27:08,842 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.7 pTM=0.515 ipTM=0.115 tol=2.37 2024-07-09 21:27:15,346 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.7 pTM=0.513 ipTM=0.114 tol=1.07 2024-07-09 21:27:21,852 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.6 pTM=0.514 ipTM=0.116 tol=2.31 2024-07-09 21:27:28,353 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.4 pTM=0.513 ipTM=0.114 tol=1.23 2024-07-09 21:27:34,855 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.4 pTM=0.514 ipTM=0.117 tol=1.49 2024-07-09 21:27:41,356 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.4 pTM=0.514 ipTM=0.116 tol=1.27 2024-07-09 21:27:47,860 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.2 pTM=0.514 ipTM=0.116 tol=1.23 2024-07-09 21:27:54,368 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.6 pTM=0.513 ipTM=0.117 tol=1.54 2024-07-09 21:28:00,869 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71 pTM=0.512 ipTM=0.114 tol=2.05 2024-07-09 21:28:07,384 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.2 pTM=0.512 ipTM=0.115 tol=1.12 2024-07-09 21:28:13,885 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.2 pTM=0.512 ipTM=0.114 tol=1.43 2024-07-09 21:28:20,393 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71 pTM=0.514 ipTM=0.115 tol=1.14 2024-07-09 21:28:26,892 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.2 pTM=0.513 ipTM=0.113 tol=1.96 2024-07-09 21:28:33,393 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.2 pTM=0.513 ipTM=0.116 tol=2.23 2024-07-09 21:28:39,897 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.3 pTM=0.513 ipTM=0.117 tol=1.35 2024-07-09 21:28:46,403 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.3 pTM=0.513 ipTM=0.116 tol=0.938 2024-07-09 21:28:52,908 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.2 pTM=0.513 ipTM=0.116 tol=0.843 2024-07-09 21:28:59,412 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.1 pTM=0.512 ipTM=0.114 tol=1.14 2024-07-09 21:29:05,920 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71 pTM=0.513 ipTM=0.116 tol=1.12 2024-07-09 21:29:12,425 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.2 pTM=0.513 ipTM=0.116 tol=1.76 2024-07-09 21:29:18,930 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.2 pTM=0.513 ipTM=0.114 tol=0.68 2024-07-09 21:29:25,432 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.9 pTM=0.513 ipTM=0.116 tol=1.55 2024-07-09 21:29:25,433 alphafold2_multimer_v3_model_5_seed_000 took 201.6s (30 recycles) 2024-07-09 21:29:25,632 reranking models by 'multimer' metric 2024-07-09 21:29:28,648 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-09 21:29:52,641 Relaxation took 27.0s 2024-07-09 21:29:52,641 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.3 pTM=0.517 ipTM=0.118 2024-07-09 21:30:05,120 Relaxation took 12.5s 2024-07-09 21:30:05,121 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.3 pTM=0.516 ipTM=0.118 2024-07-09 21:30:35,878 Relaxation took 30.8s 2024-07-09 21:30:35,878 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.9 pTM=0.515 ipTM=0.117 2024-07-09 21:30:48,611 Relaxation took 12.7s 2024-07-09 21:30:48,611 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.9 pTM=0.513 ipTM=0.116 2024-07-09 21:31:08,259 Relaxation took 19.6s 2024-07-09 21:31:08,259 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72 pTM=0.51 ipTM=0.108 2024-07-09 21:31:09,293 Done