2024-07-09 22:06:54,206 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-09 22:06:54,541 Running on GPU 2024-07-09 22:06:58,795 Found 6 citations for tools or databases 2024-07-09 22:06:58,795 Query 1/1: ELA_CPSF7 (length 525) 2024-07-09 22:06:59,317 Sleeping for 10s. Reason: PENDING 2024-07-09 22:07:09,740 Sleeping for 7s. Reason: RUNNING 2024-07-09 22:07:17,945 Sleeping for 10s. Reason: RUNNING 2024-07-09 22:07:28,859 Sleeping for 7s. Reason: RUNNING 2024-07-09 22:07:36,276 Sleeping for 5s. Reason: RUNNING 2024-07-09 22:07:41,699 Sleeping for 10s. Reason: RUNNING 2024-07-09 22:07:52,127 Sleeping for 7s. Reason: RUNNING 2024-07-09 22:08:07,516 Sleeping for 6s. Reason: PENDING 2024-07-09 22:08:13,936 Sleeping for 5s. Reason: RUNNING 2024-07-09 22:08:19,349 Sleeping for 5s. Reason: RUNNING 2024-07-09 22:08:24,770 Sleeping for 9s. Reason: RUNNING 2024-07-09 22:08:34,204 Sleeping for 7s. Reason: RUNNING 2024-07-09 22:08:41,656 Sleeping for 8s. Reason: RUNNING 2024-07-09 22:08:51,609 Setting max_seq=508, max_extra_seq=1668 2024-07-09 22:11:46,193 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.6 pTM=0.282 ipTM=0.32 2024-07-09 22:11:53,291 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=47.2 pTM=0.283 ipTM=0.31 tol=13.4 2024-07-09 22:12:00,386 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47.9 pTM=0.283 ipTM=0.303 tol=7.68 2024-07-09 22:12:07,483 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.8 pTM=0.282 ipTM=0.299 tol=5.16 2024-07-09 22:12:14,596 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47.8 pTM=0.281 ipTM=0.29 tol=6.18 2024-07-09 22:12:21,704 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47.3 pTM=0.283 ipTM=0.302 tol=3.85 2024-07-09 22:12:28,815 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.8 pTM=0.281 ipTM=0.296 tol=5.69 2024-07-09 22:12:35,927 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.5 pTM=0.282 ipTM=0.294 tol=5.91 2024-07-09 22:12:43,039 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47 pTM=0.281 ipTM=0.303 tol=6.03 2024-07-09 22:12:50,153 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.7 pTM=0.281 ipTM=0.29 tol=5.24 2024-07-09 22:12:57,270 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48 pTM=0.282 ipTM=0.3 tol=4.62 2024-07-09 22:13:04,386 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.4 pTM=0.281 ipTM=0.284 tol=5.5 2024-07-09 22:13:11,501 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47 pTM=0.283 ipTM=0.3 tol=5.52 2024-07-09 22:13:18,617 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48 pTM=0.282 ipTM=0.288 tol=5.05 2024-07-09 22:13:25,736 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.3 pTM=0.281 ipTM=0.292 tol=5.32 2024-07-09 22:13:32,851 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.3 pTM=0.281 ipTM=0.289 tol=6.67 2024-07-09 22:13:39,971 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.6 pTM=0.282 ipTM=0.291 tol=2.37 2024-07-09 22:13:47,091 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47.4 pTM=0.282 ipTM=0.3 tol=2.96 2024-07-09 22:13:54,215 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.6 pTM=0.283 ipTM=0.304 tol=4.98 2024-07-09 22:14:01,336 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.4 pTM=0.283 ipTM=0.302 tol=4.42 2024-07-09 22:14:08,458 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.8 pTM=0.283 ipTM=0.298 tol=4.01 2024-07-09 22:14:15,587 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.9 pTM=0.282 ipTM=0.292 tol=4.83 2024-07-09 22:14:22,716 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.4 pTM=0.281 ipTM=0.289 tol=4.08 2024-07-09 22:14:29,842 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.4 pTM=0.283 ipTM=0.296 tol=4.33 2024-07-09 22:14:36,962 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.3 pTM=0.281 ipTM=0.286 tol=5.17 2024-07-09 22:14:44,092 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.7 pTM=0.282 ipTM=0.298 tol=4.38 2024-07-09 22:14:51,221 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47.5 pTM=0.281 ipTM=0.287 tol=5.64 2024-07-09 22:14:58,352 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.5 pTM=0.283 ipTM=0.292 tol=2.22 2024-07-09 22:15:05,485 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.3 pTM=0.283 ipTM=0.294 tol=6.61 2024-07-09 22:15:12,618 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47 pTM=0.284 ipTM=0.31 tol=8.38 2024-07-09 22:15:19,750 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.3 pTM=0.284 ipTM=0.304 tol=4.6 2024-07-09 22:15:19,750 alphafold2_multimer_v3_model_1_seed_000 took 382.9s (30 recycles) 2024-07-09 22:15:27,083 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.4 pTM=0.282 ipTM=0.274 2024-07-09 22:15:34,228 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.4 pTM=0.279 ipTM=0.254 tol=12.9 2024-07-09 22:15:41,375 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.5 pTM=0.28 ipTM=0.255 tol=6.68 2024-07-09 22:15:48,518 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.5 pTM=0.281 ipTM=0.26 tol=8.42 2024-07-09 22:15:55,667 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.2 pTM=0.28 ipTM=0.258 tol=3.09 2024-07-09 22:16:02,812 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.4 pTM=0.282 ipTM=0.263 tol=3.18 2024-07-09 22:16:09,958 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.6 pTM=0.282 ipTM=0.276 tol=3.35 2024-07-09 22:16:17,100 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.4 pTM=0.282 ipTM=0.269 tol=4.45 2024-07-09 22:16:24,245 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.3 pTM=0.281 ipTM=0.271 tol=4.3 2024-07-09 22:16:31,388 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.8 pTM=0.281 ipTM=0.27 tol=3.72 2024-07-09 22:16:38,535 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=48.4 pTM=0.281 ipTM=0.271 tol=3.1 2024-07-09 22:16:45,682 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.5 pTM=0.279 ipTM=0.254 tol=3.04 2024-07-09 22:16:52,826 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.2 pTM=0.281 ipTM=0.277 tol=3.51 2024-07-09 22:16:59,975 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.8 pTM=0.279 ipTM=0.257 tol=2.24 2024-07-09 22:17:07,123 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.4 pTM=0.28 ipTM=0.27 tol=1.82 2024-07-09 22:17:14,271 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.5 pTM=0.278 ipTM=0.251 tol=2.44 2024-07-09 22:17:21,417 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49 pTM=0.278 ipTM=0.254 tol=1.89 2024-07-09 22:17:28,559 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.8 pTM=0.278 ipTM=0.247 tol=1.76 2024-07-09 22:17:35,704 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.6 pTM=0.281 ipTM=0.271 tol=1.83 2024-07-09 22:17:42,848 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48.6 pTM=0.28 ipTM=0.267 tol=1.79 2024-07-09 22:17:49,995 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.6 pTM=0.279 ipTM=0.259 tol=2.93 2024-07-09 22:17:57,142 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.7 pTM=0.281 ipTM=0.271 tol=2.58 2024-07-09 22:18:04,287 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.7 pTM=0.279 ipTM=0.256 tol=2.63 2024-07-09 22:18:11,428 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.3 pTM=0.281 ipTM=0.275 tol=3.48 2024-07-09 22:18:18,572 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.4 pTM=0.28 ipTM=0.271 tol=4.29 2024-07-09 22:18:25,713 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.3 pTM=0.282 ipTM=0.286 tol=3.17 2024-07-09 22:18:32,852 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.7 pTM=0.281 ipTM=0.278 tol=2.05 2024-07-09 22:18:39,994 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.5 pTM=0.281 ipTM=0.275 tol=3.24 2024-07-09 22:18:47,131 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.2 pTM=0.283 ipTM=0.294 tol=2.94 2024-07-09 22:18:54,270 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.2 pTM=0.282 ipTM=0.287 tol=3.16 2024-07-09 22:19:01,411 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.5 pTM=0.28 ipTM=0.277 tol=2.2 2024-07-09 22:19:01,412 alphafold2_multimer_v3_model_2_seed_000 took 221.5s (30 recycles) 2024-07-09 22:19:08,768 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49.9 pTM=0.282 ipTM=0.255 2024-07-09 22:19:15,942 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.3 pTM=0.288 ipTM=0.298 tol=15.6 2024-07-09 22:19:23,106 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.1 pTM=0.29 ipTM=0.29 tol=6.08 2024-07-09 22:19:30,260 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.7 pTM=0.29 ipTM=0.296 tol=6.49 2024-07-09 22:19:37,417 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.1 pTM=0.291 ipTM=0.29 tol=4.52 2024-07-09 22:19:44,581 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.3 pTM=0.289 ipTM=0.282 tol=7.71 2024-07-09 22:19:51,742 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.5 pTM=0.289 ipTM=0.281 tol=4.6 2024-07-09 22:19:58,910 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.8 pTM=0.29 ipTM=0.28 tol=6.64 2024-07-09 22:20:06,074 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.8 pTM=0.289 ipTM=0.278 tol=6.8 2024-07-09 22:20:13,238 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48 pTM=0.292 ipTM=0.29 tol=5.19 2024-07-09 22:20:20,406 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.2 pTM=0.292 ipTM=0.283 tol=3.87 2024-07-09 22:20:27,573 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.8 pTM=0.293 ipTM=0.293 tol=2.69 2024-07-09 22:20:34,739 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.9 pTM=0.291 ipTM=0.283 tol=7.12 2024-07-09 22:20:41,908 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.2 pTM=0.29 ipTM=0.29 tol=4 2024-07-09 22:20:49,063 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.7 pTM=0.289 ipTM=0.276 tol=3.61 2024-07-09 22:20:56,226 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.7 pTM=0.292 ipTM=0.298 tol=5.76 2024-07-09 22:21:03,397 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.4 pTM=0.289 ipTM=0.276 tol=2.7 2024-07-09 22:21:10,559 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.3 pTM=0.291 ipTM=0.299 tol=4.51 2024-07-09 22:21:17,728 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.5 pTM=0.29 ipTM=0.282 tol=2.72 2024-07-09 22:21:24,896 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.8 pTM=0.292 ipTM=0.295 tol=1.85 2024-07-09 22:21:32,069 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.6 pTM=0.29 ipTM=0.278 tol=3.29 2024-07-09 22:21:39,236 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.5 pTM=0.289 ipTM=0.285 tol=2.02 2024-07-09 22:21:46,406 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.2 pTM=0.289 ipTM=0.281 tol=1.79 2024-07-09 22:21:53,571 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.2 pTM=0.291 ipTM=0.295 tol=2.32 2024-07-09 22:22:00,739 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.2 pTM=0.291 ipTM=0.284 tol=2.66 2024-07-09 22:22:07,908 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.3 pTM=0.291 ipTM=0.292 tol=4.44 2024-07-09 22:22:15,078 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.9 pTM=0.291 ipTM=0.283 tol=4.07 2024-07-09 22:22:22,249 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47.6 pTM=0.291 ipTM=0.297 tol=2.01 2024-07-09 22:22:29,418 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.4 pTM=0.29 ipTM=0.283 tol=2.46 2024-07-09 22:22:36,588 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.4 pTM=0.29 ipTM=0.294 tol=4.18 2024-07-09 22:22:43,753 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.1 pTM=0.29 ipTM=0.283 tol=3.59 2024-07-09 22:22:43,754 alphafold2_multimer_v3_model_3_seed_000 took 222.2s (30 recycles) 2024-07-09 22:22:51,108 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.1 pTM=0.272 ipTM=0.237 2024-07-09 22:22:58,257 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.5 pTM=0.28 ipTM=0.272 tol=15.5 2024-07-09 22:23:05,400 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.8 pTM=0.284 ipTM=0.281 tol=7.29 2024-07-09 22:23:12,536 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.5 pTM=0.285 ipTM=0.302 tol=5.25 2024-07-09 22:23:19,673 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.6 pTM=0.284 ipTM=0.284 tol=4.36 2024-07-09 22:23:26,808 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.4 pTM=0.281 ipTM=0.276 tol=5.58 2024-07-09 22:23:33,945 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.5 pTM=0.284 ipTM=0.29 tol=3.96 2024-07-09 22:23:41,085 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.9 pTM=0.281 ipTM=0.27 tol=4.3 2024-07-09 22:23:48,220 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.5 pTM=0.283 ipTM=0.288 tol=3.64 2024-07-09 22:23:55,359 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.4 pTM=0.281 ipTM=0.273 tol=4.39 2024-07-09 22:24:02,495 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.5 pTM=0.283 ipTM=0.284 tol=3.65 2024-07-09 22:24:09,634 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.8 pTM=0.281 ipTM=0.27 tol=1.91 2024-07-09 22:24:16,768 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.1 pTM=0.283 ipTM=0.287 tol=4.12 2024-07-09 22:24:23,906 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.6 pTM=0.281 ipTM=0.271 tol=4.59 2024-07-09 22:24:31,040 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.3 pTM=0.281 ipTM=0.28 tol=2.75 2024-07-09 22:24:38,173 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.2 pTM=0.281 ipTM=0.268 tol=4.28 2024-07-09 22:24:45,305 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.5 pTM=0.282 ipTM=0.279 tol=3.5 2024-07-09 22:24:52,437 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.3 pTM=0.282 ipTM=0.277 tol=3.43 2024-07-09 22:24:59,571 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.4 pTM=0.283 ipTM=0.279 tol=2.41 2024-07-09 22:25:06,705 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.4 pTM=0.283 ipTM=0.272 tol=3.67 2024-07-09 22:25:13,846 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.4 pTM=0.283 ipTM=0.272 tol=2.77 2024-07-09 22:25:20,979 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.4 pTM=0.282 ipTM=0.272 tol=2.89 2024-07-09 22:25:28,118 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.4 pTM=0.281 ipTM=0.277 tol=2.88 2024-07-09 22:25:35,252 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.2 pTM=0.282 ipTM=0.28 tol=6.29 2024-07-09 22:25:42,390 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.5 pTM=0.283 ipTM=0.275 tol=7.57 2024-07-09 22:25:49,529 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.4 pTM=0.282 ipTM=0.273 tol=3.41 2024-07-09 22:25:56,666 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.4 pTM=0.282 ipTM=0.274 tol=5.15 2024-07-09 22:26:03,799 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.5 pTM=0.282 ipTM=0.273 tol=6.41 2024-07-09 22:26:10,939 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.2 pTM=0.282 ipTM=0.277 tol=4.34 2024-07-09 22:26:18,078 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.7 pTM=0.281 ipTM=0.268 tol=4.31 2024-07-09 22:26:25,216 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.5 pTM=0.281 ipTM=0.273 tol=2.6 2024-07-09 22:26:25,216 alphafold2_multimer_v3_model_4_seed_000 took 221.3s (30 recycles) 2024-07-09 22:26:32,564 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46 pTM=0.281 ipTM=0.27 2024-07-09 22:26:39,722 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47 pTM=0.281 ipTM=0.261 tol=13.4 2024-07-09 22:26:46,890 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=47.8 pTM=0.281 ipTM=0.267 tol=10.1 2024-07-09 22:26:54,044 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.2 pTM=0.287 ipTM=0.286 tol=4.98 2024-07-09 22:27:01,200 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.3 pTM=0.288 ipTM=0.289 tol=3.73 2024-07-09 22:27:08,355 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.3 pTM=0.286 ipTM=0.284 tol=5.82 2024-07-09 22:27:15,512 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.4 pTM=0.286 ipTM=0.276 tol=7.68 2024-07-09 22:27:22,673 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.8 pTM=0.283 ipTM=0.271 tol=3.48 2024-07-09 22:27:29,829 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.4 pTM=0.283 ipTM=0.269 tol=3.84 2024-07-09 22:27:36,991 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47 pTM=0.282 ipTM=0.259 tol=5.18 2024-07-09 22:27:44,146 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.5 pTM=0.284 ipTM=0.269 tol=4.76 2024-07-09 22:27:51,305 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.5 pTM=0.283 ipTM=0.261 tol=3.86 2024-07-09 22:27:58,461 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.2 pTM=0.285 ipTM=0.271 tol=5.71 2024-07-09 22:28:05,625 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.5 pTM=0.283 ipTM=0.267 tol=2.56 2024-07-09 22:28:12,787 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.3 pTM=0.283 ipTM=0.266 tol=7.36 2024-07-09 22:28:19,937 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.2 pTM=0.285 ipTM=0.273 tol=2.56 2024-07-09 22:28:27,103 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.8 pTM=0.284 ipTM=0.268 tol=3.19 2024-07-09 22:28:34,257 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.9 pTM=0.286 ipTM=0.28 tol=3.37 2024-07-09 22:28:41,414 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.2 pTM=0.284 ipTM=0.269 tol=3 2024-07-09 22:28:48,571 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.3 pTM=0.284 ipTM=0.267 tol=3.29 2024-07-09 22:28:55,732 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.6 pTM=0.283 ipTM=0.262 tol=2 2024-07-09 22:29:02,888 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.1 pTM=0.284 ipTM=0.27 tol=3.52 2024-07-09 22:29:10,050 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47 pTM=0.282 ipTM=0.262 tol=2.48 2024-07-09 22:29:17,205 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.7 pTM=0.284 ipTM=0.268 tol=4.35 2024-07-09 22:29:24,368 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.1 pTM=0.282 ipTM=0.263 tol=3.13 2024-07-09 22:29:31,525 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=46.8 pTM=0.284 ipTM=0.269 tol=4.04 2024-07-09 22:29:38,685 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47 pTM=0.284 ipTM=0.264 tol=4.02 2024-07-09 22:29:45,839 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46.8 pTM=0.285 ipTM=0.266 tol=3.64 2024-07-09 22:29:52,996 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46.8 pTM=0.283 ipTM=0.264 tol=5.88 2024-07-09 22:30:00,157 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.9 pTM=0.284 ipTM=0.27 tol=4.21 2024-07-09 22:30:07,323 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.1 pTM=0.281 ipTM=0.26 tol=2.53 2024-07-09 22:30:07,323 alphafold2_multimer_v3_model_5_seed_000 took 221.9s (30 recycles) 2024-07-09 22:30:07,510 reranking models by 'multimer' metric 2024-07-09 22:30:10,242 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-09 22:30:35,059 Relaxation took 27.5s 2024-07-09 22:30:35,059 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.3 pTM=0.284 ipTM=0.304 2024-07-09 22:31:08,653 Relaxation took 33.6s 2024-07-09 22:31:08,654 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.1 pTM=0.29 ipTM=0.283 2024-07-09 22:31:38,437 Relaxation took 29.8s 2024-07-09 22:31:38,437 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.5 pTM=0.28 ipTM=0.277 2024-07-09 22:32:02,626 Relaxation took 24.2s 2024-07-09 22:32:02,626 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.5 pTM=0.281 ipTM=0.273 2024-07-09 22:32:31,071 Relaxation took 28.4s 2024-07-09 22:32:31,071 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.1 pTM=0.281 ipTM=0.26 2024-07-09 22:32:32,073 Done