2024-07-09 23:58:39,970 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-09 23:58:40,295 Running on GPU 2024-07-09 23:58:44,140 Found 6 citations for tools or databases 2024-07-09 23:58:44,140 Query 1/1: EPOP_HS3S5 (length 725) 2024-07-09 23:58:44,790 Sleeping for 9s. Reason: PENDING 2024-07-09 23:58:54,231 Sleeping for 8s. Reason: RUNNING 2024-07-09 23:59:02,662 Sleeping for 9s. Reason: RUNNING 2024-07-09 23:59:12,092 Sleeping for 5s. Reason: RUNNING 2024-07-09 23:59:17,520 Sleeping for 7s. Reason: RUNNING 2024-07-09 23:59:24,939 Sleeping for 5s. Reason: RUNNING 2024-07-09 23:59:30,364 Sleeping for 5s. Reason: RUNNING 2024-07-09 23:59:35,792 Sleeping for 5s. Reason: RUNNING 2024-07-09 23:59:41,192 Sleeping for 7s. Reason: RUNNING 2024-07-09 23:59:48,608 Sleeping for 5s. Reason: RUNNING 2024-07-09 23:59:58,098 Sleeping for 7s. Reason: PENDING 2024-07-10 00:00:05,804 Sleeping for 6s. Reason: RUNNING 2024-07-10 00:00:12,225 Sleeping for 7s. Reason: RUNNING 2024-07-10 00:00:19,667 Sleeping for 6s. Reason: RUNNING 2024-07-10 00:00:27,743 Setting max_seq=508, max_extra_seq=2048 2024-07-10 00:03:22,894 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.4 pTM=0.429 ipTM=0.143 2024-07-10 00:03:33,392 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=47.1 pTM=0.434 ipTM=0.157 tol=8.97 2024-07-10 00:03:43,890 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.4 pTM=0.437 ipTM=0.173 tol=5.23 2024-07-10 00:03:54,417 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48 pTM=0.438 ipTM=0.177 tol=4.84 2024-07-10 00:04:04,966 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47.7 pTM=0.436 ipTM=0.173 tol=5.53 2024-07-10 00:04:15,544 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48 pTM=0.439 ipTM=0.178 tol=4.62 2024-07-10 00:04:26,101 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.6 pTM=0.438 ipTM=0.173 tol=2.38 2024-07-10 00:04:36,685 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.1 pTM=0.439 ipTM=0.168 tol=1.72 2024-07-10 00:04:47,259 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.6 pTM=0.438 ipTM=0.181 tol=1.67 2024-07-10 00:04:57,865 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.4 pTM=0.438 ipTM=0.17 tol=1.56 2024-07-10 00:05:08,465 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.8 pTM=0.437 ipTM=0.179 tol=1.36 2024-07-10 00:05:19,082 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.9 pTM=0.438 ipTM=0.176 tol=1.6 2024-07-10 00:05:29,697 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.8 pTM=0.438 ipTM=0.173 tol=2.33 2024-07-10 00:05:40,325 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.1 pTM=0.439 ipTM=0.176 tol=1.21 2024-07-10 00:05:50,917 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.2 pTM=0.437 ipTM=0.176 tol=2.7 2024-07-10 00:06:01,531 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.5 pTM=0.438 ipTM=0.181 tol=2 2024-07-10 00:06:12,140 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.3 pTM=0.438 ipTM=0.184 tol=1.65 2024-07-10 00:06:22,767 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48 pTM=0.437 ipTM=0.17 tol=1.84 2024-07-10 00:06:33,367 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.2 pTM=0.439 ipTM=0.181 tol=3.08 2024-07-10 00:06:43,968 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.9 pTM=0.437 ipTM=0.177 tol=2.15 2024-07-10 00:06:54,575 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.4 pTM=0.437 ipTM=0.181 tol=1.85 2024-07-10 00:07:05,203 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.2 pTM=0.438 ipTM=0.178 tol=2.23 2024-07-10 00:07:15,814 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.6 pTM=0.436 ipTM=0.174 tol=3.28 2024-07-10 00:07:26,442 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48.5 pTM=0.437 ipTM=0.175 tol=1.56 2024-07-10 00:07:37,073 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.2 pTM=0.437 ipTM=0.178 tol=1.76 2024-07-10 00:07:47,702 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.1 pTM=0.437 ipTM=0.18 tol=1.17 2024-07-10 00:07:58,336 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48 pTM=0.438 ipTM=0.18 tol=1.2 2024-07-10 00:08:08,950 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.7 pTM=0.436 ipTM=0.175 tol=1.19 2024-07-10 00:08:19,573 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.8 pTM=0.437 ipTM=0.169 tol=1.52 2024-07-10 00:08:30,190 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47.9 pTM=0.436 ipTM=0.172 tol=1.2 2024-07-10 00:08:40,816 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.9 pTM=0.438 ipTM=0.189 tol=1.93 2024-07-10 00:08:40,817 alphafold2_multimer_v3_model_1_seed_000 took 488.1s (30 recycles) 2024-07-10 00:08:51,747 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.9 pTM=0.438 ipTM=0.156 2024-07-10 00:09:02,371 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=47 pTM=0.444 ipTM=0.155 tol=9.79 2024-07-10 00:09:12,995 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.3 pTM=0.441 ipTM=0.156 tol=5.7 2024-07-10 00:09:23,641 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.6 pTM=0.442 ipTM=0.154 tol=5.25 2024-07-10 00:09:34,271 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.4 pTM=0.44 ipTM=0.148 tol=3.3 2024-07-10 00:09:44,938 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.9 pTM=0.445 ipTM=0.156 tol=4.66 2024-07-10 00:09:55,588 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.8 pTM=0.444 ipTM=0.158 tol=4.73 2024-07-10 00:10:06,251 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47.9 pTM=0.446 ipTM=0.156 tol=4.65 2024-07-10 00:10:16,887 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.8 pTM=0.441 ipTM=0.153 tol=8.3 2024-07-10 00:10:27,556 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.3 pTM=0.445 ipTM=0.156 tol=5.83 2024-07-10 00:10:38,235 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.9 pTM=0.445 ipTM=0.156 tol=4.14 2024-07-10 00:10:48,899 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.9 pTM=0.445 ipTM=0.158 tol=2.01 2024-07-10 00:10:59,577 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.2 pTM=0.446 ipTM=0.154 tol=2.78 2024-07-10 00:11:10,259 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.1 pTM=0.446 ipTM=0.156 tol=3.2 2024-07-10 00:11:20,916 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.1 pTM=0.444 ipTM=0.152 tol=6.09 2024-07-10 00:11:31,589 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.3 pTM=0.445 ipTM=0.152 tol=4.47 2024-07-10 00:11:42,262 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.4 pTM=0.445 ipTM=0.152 tol=3.88 2024-07-10 00:11:52,938 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.2 pTM=0.446 ipTM=0.154 tol=3.74 2024-07-10 00:12:03,585 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.1 pTM=0.442 ipTM=0.15 tol=5.08 2024-07-10 00:12:14,233 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48.2 pTM=0.442 ipTM=0.15 tol=2.77 2024-07-10 00:12:24,901 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.2 pTM=0.444 ipTM=0.155 tol=3.02 2024-07-10 00:12:35,574 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.1 pTM=0.444 ipTM=0.15 tol=6 2024-07-10 00:12:46,219 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.7 pTM=0.441 ipTM=0.149 tol=2.89 2024-07-10 00:12:56,883 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48 pTM=0.443 ipTM=0.152 tol=3.8 2024-07-10 00:13:07,566 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48 pTM=0.445 ipTM=0.153 tol=2.22 2024-07-10 00:13:18,239 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.9 pTM=0.446 ipTM=0.155 tol=1.31 2024-07-10 00:13:28,909 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.1 pTM=0.447 ipTM=0.156 tol=5.95 2024-07-10 00:13:39,576 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.7 pTM=0.446 ipTM=0.153 tol=7.73 2024-07-10 00:13:50,252 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.9 pTM=0.445 ipTM=0.152 tol=5.28 2024-07-10 00:14:00,906 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.9 pTM=0.444 ipTM=0.151 tol=3.36 2024-07-10 00:14:11,571 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48 pTM=0.445 ipTM=0.153 tol=3.28 2024-07-10 00:14:11,572 alphafold2_multimer_v3_model_2_seed_000 took 330.4s (30 recycles) 2024-07-10 00:14:22,586 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46.6 pTM=0.439 ipTM=0.165 2024-07-10 00:14:33,261 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=46.5 pTM=0.438 ipTM=0.158 tol=10.7 2024-07-10 00:14:43,950 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46.5 pTM=0.441 ipTM=0.16 tol=6.47 2024-07-10 00:14:54,664 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47 pTM=0.44 ipTM=0.162 tol=5.07 2024-07-10 00:15:05,381 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47 pTM=0.44 ipTM=0.154 tol=3.81 2024-07-10 00:15:16,099 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.1 pTM=0.441 ipTM=0.155 tol=2.97 2024-07-10 00:15:26,812 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.3 pTM=0.44 ipTM=0.158 tol=2.44 2024-07-10 00:15:37,537 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.2 pTM=0.44 ipTM=0.155 tol=2.02 2024-07-10 00:15:48,253 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.1 pTM=0.441 ipTM=0.165 tol=2.5 2024-07-10 00:15:58,978 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.2 pTM=0.442 ipTM=0.167 tol=2.28 2024-07-10 00:16:09,697 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.3 pTM=0.443 ipTM=0.179 tol=3.15 2024-07-10 00:16:20,425 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.1 pTM=0.441 ipTM=0.167 tol=2.66 2024-07-10 00:16:31,141 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.3 pTM=0.442 ipTM=0.168 tol=2.13 2024-07-10 00:16:41,866 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.4 pTM=0.442 ipTM=0.172 tol=2.42 2024-07-10 00:16:52,584 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.3 pTM=0.441 ipTM=0.165 tol=3.56 2024-07-10 00:17:03,292 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.1 pTM=0.441 ipTM=0.165 tol=2.04 2024-07-10 00:17:14,003 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47.2 pTM=0.443 ipTM=0.17 tol=2.37 2024-07-10 00:17:24,725 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.4 pTM=0.442 ipTM=0.163 tol=2.56 2024-07-10 00:17:35,446 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.3 pTM=0.443 ipTM=0.163 tol=2.48 2024-07-10 00:17:46,158 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.4 pTM=0.443 ipTM=0.166 tol=2.17 2024-07-10 00:17:56,889 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47.5 pTM=0.444 ipTM=0.176 tol=2.51 2024-07-10 00:18:07,623 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.7 pTM=0.444 ipTM=0.179 tol=2.11 2024-07-10 00:18:18,350 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.5 pTM=0.441 ipTM=0.163 tol=2.42 2024-07-10 00:18:29,071 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.5 pTM=0.444 ipTM=0.18 tol=2.21 2024-07-10 00:18:39,805 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.4 pTM=0.441 ipTM=0.169 tol=3.26 2024-07-10 00:18:50,541 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.7 pTM=0.447 ipTM=0.202 tol=3.43 2024-07-10 00:19:01,272 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.7 pTM=0.443 ipTM=0.178 tol=3.53 2024-07-10 00:19:11,998 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47.4 pTM=0.445 ipTM=0.198 tol=2.48 2024-07-10 00:19:22,730 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.5 pTM=0.443 ipTM=0.184 tol=2.34 2024-07-10 00:19:33,465 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.5 pTM=0.446 ipTM=0.214 tol=2.73 2024-07-10 00:19:44,198 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.5 pTM=0.443 ipTM=0.173 tol=3.21 2024-07-10 00:19:44,199 alphafold2_multimer_v3_model_3_seed_000 took 332.3s (30 recycles) 2024-07-10 00:19:55,257 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.3 pTM=0.44 ipTM=0.155 2024-07-10 00:20:05,996 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=45.8 pTM=0.441 ipTM=0.162 tol=10.3 2024-07-10 00:20:16,735 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.4 pTM=0.435 ipTM=0.151 tol=9.3 2024-07-10 00:20:27,479 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.2 pTM=0.441 ipTM=0.165 tol=6.79 2024-07-10 00:20:38,232 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.1 pTM=0.439 ipTM=0.159 tol=4.55 2024-07-10 00:20:48,992 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.7 pTM=0.444 ipTM=0.161 tol=4.54 2024-07-10 00:20:59,743 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.4 pTM=0.443 ipTM=0.159 tol=3.63 2024-07-10 00:21:10,487 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.9 pTM=0.445 ipTM=0.16 tol=2.2 2024-07-10 00:21:21,232 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.5 pTM=0.445 ipTM=0.181 tol=3.37 2024-07-10 00:21:31,973 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.1 pTM=0.446 ipTM=0.164 tol=3.44 2024-07-10 00:21:42,727 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47 pTM=0.446 ipTM=0.169 tol=3.79 2024-07-10 00:21:53,470 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.5 pTM=0.444 ipTM=0.163 tol=2.81 2024-07-10 00:22:04,220 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.9 pTM=0.446 ipTM=0.167 tol=2.59 2024-07-10 00:22:14,983 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47.1 pTM=0.447 ipTM=0.162 tol=3.45 2024-07-10 00:22:25,727 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.5 pTM=0.443 ipTM=0.166 tol=3.17 2024-07-10 00:22:36,470 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.6 pTM=0.442 ipTM=0.158 tol=2.25 2024-07-10 00:22:47,232 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.8 pTM=0.443 ipTM=0.167 tol=3.23 2024-07-10 00:22:57,988 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.8 pTM=0.442 ipTM=0.159 tol=3.77 2024-07-10 00:23:08,732 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.5 pTM=0.445 ipTM=0.17 tol=6.27 2024-07-10 00:23:19,479 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.6 pTM=0.442 ipTM=0.161 tol=5.73 2024-07-10 00:23:30,238 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47 pTM=0.442 ipTM=0.169 tol=2.56 2024-07-10 00:23:41,000 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47 pTM=0.444 ipTM=0.16 tol=2.43 2024-07-10 00:23:51,739 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.8 pTM=0.443 ipTM=0.168 tol=2.47 2024-07-10 00:24:02,493 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.2 pTM=0.444 ipTM=0.159 tol=2.85 2024-07-10 00:24:13,239 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.2 pTM=0.446 ipTM=0.169 tol=1.96 2024-07-10 00:24:23,985 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.3 pTM=0.445 ipTM=0.171 tol=2.09 2024-07-10 00:24:34,725 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.5 pTM=0.446 ipTM=0.186 tol=2.22 2024-07-10 00:24:45,474 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.2 pTM=0.443 ipTM=0.17 tol=3.03 2024-07-10 00:24:56,227 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47 pTM=0.445 ipTM=0.172 tol=3.12 2024-07-10 00:25:06,983 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.1 pTM=0.444 ipTM=0.171 tol=2.74 2024-07-10 00:25:17,735 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.2 pTM=0.447 ipTM=0.17 tol=2.25 2024-07-10 00:25:17,736 alphafold2_multimer_v3_model_4_seed_000 took 333.2s (30 recycles) 2024-07-10 00:25:28,775 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.6 pTM=0.422 ipTM=0.135 2024-07-10 00:25:39,481 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=45 pTM=0.425 ipTM=0.138 tol=10.2 2024-07-10 00:25:50,213 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.8 pTM=0.429 ipTM=0.144 tol=11 2024-07-10 00:26:00,956 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.5 pTM=0.433 ipTM=0.146 tol=4.54 2024-07-10 00:26:11,699 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.4 pTM=0.434 ipTM=0.148 tol=4.93 2024-07-10 00:26:22,444 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.6 pTM=0.437 ipTM=0.152 tol=4.24 2024-07-10 00:26:33,185 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47 pTM=0.437 ipTM=0.152 tol=3.34 2024-07-10 00:26:43,929 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47 pTM=0.439 ipTM=0.154 tol=4.42 2024-07-10 00:26:54,669 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47 pTM=0.438 ipTM=0.154 tol=4.15 2024-07-10 00:27:05,414 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.3 pTM=0.44 ipTM=0.153 tol=3.16 2024-07-10 00:27:16,145 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.1 pTM=0.441 ipTM=0.157 tol=2.31 2024-07-10 00:27:26,875 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.1 pTM=0.441 ipTM=0.158 tol=3.73 2024-07-10 00:27:37,607 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.4 pTM=0.443 ipTM=0.16 tol=2.21 2024-07-10 00:27:48,332 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.3 pTM=0.441 ipTM=0.159 tol=2.52 2024-07-10 00:27:59,068 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47 pTM=0.44 ipTM=0.156 tol=3.38 2024-07-10 00:28:09,798 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47 pTM=0.438 ipTM=0.153 tol=1.87 2024-07-10 00:28:20,515 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47 pTM=0.44 ipTM=0.156 tol=4.55 2024-07-10 00:28:31,246 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47 pTM=0.441 ipTM=0.156 tol=2 2024-07-10 00:28:41,973 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47 pTM=0.439 ipTM=0.152 tol=4.25 2024-07-10 00:28:52,710 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.2 pTM=0.438 ipTM=0.151 tol=1.66 2024-07-10 00:29:03,430 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.2 pTM=0.439 ipTM=0.157 tol=4.13 2024-07-10 00:29:14,162 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.2 pTM=0.439 ipTM=0.155 tol=1.89 2024-07-10 00:29:24,887 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.2 pTM=0.438 ipTM=0.155 tol=1.74 2024-07-10 00:29:35,624 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.2 pTM=0.439 ipTM=0.152 tol=3.39 2024-07-10 00:29:46,350 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.2 pTM=0.439 ipTM=0.153 tol=3.78 2024-07-10 00:29:57,084 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.2 pTM=0.44 ipTM=0.155 tol=1.56 2024-07-10 00:30:07,818 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.4 pTM=0.439 ipTM=0.153 tol=3.53 2024-07-10 00:30:18,550 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.1 pTM=0.44 ipTM=0.156 tol=3.87 2024-07-10 00:30:29,278 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.1 pTM=0.441 ipTM=0.157 tol=3.99 2024-07-10 00:30:40,015 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.3 pTM=0.441 ipTM=0.156 tol=1.84 2024-07-10 00:30:50,745 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.1 pTM=0.441 ipTM=0.157 tol=4.29 2024-07-10 00:30:50,746 alphafold2_multimer_v3_model_5_seed_000 took 332.7s (30 recycles) 2024-07-10 00:30:51,079 reranking models by 'multimer' metric 2024-07-10 00:30:52,075 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 00:31:43,243 Relaxation took 52.2s 2024-07-10 00:31:43,243 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.9 pTM=0.438 ipTM=0.189 2024-07-10 00:32:27,680 Relaxation took 44.4s 2024-07-10 00:32:27,680 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.5 pTM=0.443 ipTM=0.173 2024-07-10 00:33:14,239 Relaxation took 46.6s 2024-07-10 00:33:14,280 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.2 pTM=0.447 ipTM=0.17 2024-07-10 00:33:58,633 Relaxation took 44.4s 2024-07-10 00:33:58,633 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.1 pTM=0.441 ipTM=0.157 2024-07-10 00:34:44,232 Relaxation took 45.6s 2024-07-10 00:34:44,232 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48 pTM=0.445 ipTM=0.153 2024-07-10 00:34:45,484 Done