2024-07-10 01:23:32,913 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 01:23:33,236 Running on GPU 2024-07-10 01:23:36,946 Found 6 citations for tools or databases 2024-07-10 01:23:36,946 Query 1/1: EVI5_ATG9A (length 1649) 2024-07-10 01:23:37,791 Sleeping for 9s. Reason: PENDING 2024-07-10 01:23:47,222 Sleeping for 9s. Reason: RUNNING 2024-07-10 01:23:56,656 Sleeping for 5s. Reason: RUNNING 2024-07-10 01:24:02,074 Sleeping for 8s. Reason: RUNNING 2024-07-10 01:24:11,422 Sleeping for 7s. Reason: RUNNING 2024-07-10 01:24:18,831 Sleeping for 7s. Reason: RUNNING 2024-07-10 01:24:26,263 Sleeping for 5s. Reason: RUNNING 2024-07-10 01:24:31,894 Sleeping for 7s. Reason: RUNNING 2024-07-10 01:24:39,658 Sleeping for 10s. Reason: RUNNING 2024-07-10 01:24:50,097 Sleeping for 7s. Reason: RUNNING 2024-07-10 01:24:57,515 Sleeping for 10s. Reason: RUNNING 2024-07-10 01:25:25,394 Sleeping for 5s. Reason: PENDING 2024-07-10 01:25:30,803 Sleeping for 5s. Reason: RUNNING 2024-07-10 01:25:36,229 Sleeping for 7s. Reason: RUNNING 2024-07-10 01:25:43,671 Sleeping for 10s. Reason: RUNNING 2024-07-10 01:25:54,428 Sleeping for 8s. Reason: RUNNING 2024-07-10 01:26:02,848 Sleeping for 6s. Reason: RUNNING 2024-07-10 01:26:09,497 Sleeping for 5s. Reason: RUNNING 2024-07-10 01:26:14,914 Sleeping for 9s. Reason: RUNNING 2024-07-10 01:26:24,336 Sleeping for 7s. Reason: RUNNING 2024-07-10 01:26:31,746 Sleeping for 5s. Reason: RUNNING 2024-07-10 01:26:48,141 Setting max_seq=508, max_extra_seq=2048 2024-07-10 01:31:11,358 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.1 pTM=0.39 ipTM=0.172 2024-07-10 01:32:39,030 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.2 pTM=0.447 ipTM=0.189 tol=20.5 2024-07-10 01:34:06,593 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.3 pTM=0.452 ipTM=0.192 tol=10.1 2024-07-10 01:35:34,198 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.3 pTM=0.456 ipTM=0.204 tol=9.93 2024-07-10 01:37:01,835 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.3 pTM=0.455 ipTM=0.199 tol=5.27 2024-07-10 01:38:29,516 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.3 pTM=0.454 ipTM=0.228 tol=5.04 2024-07-10 01:39:57,218 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.6 pTM=0.455 ipTM=0.191 tol=4.41 2024-07-10 01:41:24,946 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60.5 pTM=0.452 ipTM=0.188 tol=4.05 2024-07-10 01:42:52,637 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.5 pTM=0.453 ipTM=0.218 tol=2.68 2024-07-10 01:44:20,313 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.7 pTM=0.453 ipTM=0.194 tol=3.03 2024-07-10 01:45:47,983 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.5 pTM=0.45 ipTM=0.185 tol=2.67 2024-07-10 01:47:15,640 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.5 pTM=0.455 ipTM=0.199 tol=1.94 2024-07-10 01:48:43,450 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.4 pTM=0.455 ipTM=0.205 tol=2.23 2024-07-10 01:50:11,114 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.2 pTM=0.454 ipTM=0.199 tol=2.16 2024-07-10 01:51:38,980 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.3 pTM=0.452 ipTM=0.19 tol=3.34 2024-07-10 01:53:06,654 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.3 pTM=0.454 ipTM=0.201 tol=2.66 2024-07-10 01:54:34,337 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.3 pTM=0.453 ipTM=0.197 tol=7.69 2024-07-10 01:56:02,060 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.1 pTM=0.455 ipTM=0.212 tol=7.64 2024-07-10 01:57:29,757 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.9 pTM=0.453 ipTM=0.209 tol=3.43 2024-07-10 01:58:57,409 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.1 pTM=0.451 ipTM=0.227 tol=3.52 2024-07-10 02:00:25,042 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.1 pTM=0.453 ipTM=0.198 tol=1.72 2024-07-10 02:01:52,725 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.3 pTM=0.453 ipTM=0.195 tol=4.28 2024-07-10 02:03:20,468 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.2 pTM=0.454 ipTM=0.199 tol=1.63 2024-07-10 02:04:48,176 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.1 pTM=0.453 ipTM=0.192 tol=1.7 2024-07-10 02:06:15,861 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.2 pTM=0.454 ipTM=0.202 tol=4.58 2024-07-10 02:07:43,615 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.2 pTM=0.454 ipTM=0.193 tol=4.82 2024-07-10 02:09:11,331 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.3 pTM=0.455 ipTM=0.206 tol=5.45 2024-07-10 02:10:39,037 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.2 pTM=0.452 ipTM=0.193 tol=6.06 2024-07-10 02:12:06,642 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60 pTM=0.451 ipTM=0.202 tol=8.66 2024-07-10 02:13:34,402 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.2 pTM=0.451 ipTM=0.207 tol=6.98 2024-07-10 02:15:02,077 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.1 pTM=0.453 ipTM=0.212 tol=2.98 2024-07-10 02:15:02,078 alphafold2_multimer_v3_model_1_seed_000 took 2888.8s (30 recycles) 2024-07-10 02:16:31,380 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.3 pTM=0.452 ipTM=0.175 2024-07-10 02:17:59,121 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.3 pTM=0.461 ipTM=0.182 tol=10.1 2024-07-10 02:19:26,811 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.9 pTM=0.459 ipTM=0.191 tol=8.25 2024-07-10 02:20:54,592 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.2 pTM=0.455 ipTM=0.186 tol=7.32 2024-07-10 02:22:22,405 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60 pTM=0.456 ipTM=0.178 tol=6.3 2024-07-10 02:23:50,193 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.5 pTM=0.455 ipTM=0.18 tol=5.14 2024-07-10 02:25:17,963 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60 pTM=0.453 ipTM=0.182 tol=3.99 2024-07-10 02:26:45,702 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.8 pTM=0.454 ipTM=0.196 tol=5.86 2024-07-10 02:28:13,470 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.2 pTM=0.455 ipTM=0.204 tol=4.48 2024-07-10 02:29:41,236 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.1 pTM=0.455 ipTM=0.203 tol=3.89 2024-07-10 02:31:09,129 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.3 pTM=0.454 ipTM=0.205 tol=3.62 2024-07-10 02:32:36,881 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.2 pTM=0.455 ipTM=0.198 tol=2.7 2024-07-10 02:34:04,650 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.5 pTM=0.456 ipTM=0.202 tol=2.62 2024-07-10 02:35:32,417 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.1 pTM=0.456 ipTM=0.21 tol=4.6 2024-07-10 02:37:00,299 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.3 pTM=0.456 ipTM=0.205 tol=3.06 2024-07-10 02:38:28,032 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.4 pTM=0.457 ipTM=0.202 tol=2.5 2024-07-10 02:39:55,882 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.2 pTM=0.457 ipTM=0.207 tol=3.76 2024-07-10 02:41:23,588 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.4 pTM=0.458 ipTM=0.214 tol=4.32 2024-07-10 02:42:51,305 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.6 pTM=0.458 ipTM=0.231 tol=3.58 2024-07-10 02:44:19,071 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.4 pTM=0.456 ipTM=0.246 tol=4.68 2024-07-10 02:45:46,870 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.4 pTM=0.456 ipTM=0.261 tol=5.52 2024-07-10 02:47:14,730 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.5 pTM=0.457 ipTM=0.245 tol=7.41 2024-07-10 02:48:42,664 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.4 pTM=0.456 ipTM=0.244 tol=6.57 2024-07-10 02:50:10,488 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.5 pTM=0.455 ipTM=0.262 tol=6.94 2024-07-10 02:51:38,282 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.4 pTM=0.455 ipTM=0.274 tol=3.5 2024-07-10 02:53:06,138 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.4 pTM=0.455 ipTM=0.268 tol=3.98 2024-07-10 02:54:34,090 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.1 pTM=0.455 ipTM=0.264 tol=2.65 2024-07-10 02:56:01,997 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.2 pTM=0.454 ipTM=0.253 tol=3.21 2024-07-10 02:57:29,855 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.2 pTM=0.456 ipTM=0.247 tol=2.58 2024-07-10 02:58:57,790 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.4 pTM=0.453 ipTM=0.244 tol=2.42 2024-07-10 03:00:25,616 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.2 pTM=0.454 ipTM=0.258 tol=4.52 2024-07-10 03:00:25,617 alphafold2_multimer_v3_model_2_seed_000 took 2721.9s (30 recycles) 2024-07-10 03:01:55,189 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59 pTM=0.456 ipTM=0.198 2024-07-10 03:03:23,329 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.7 pTM=0.449 ipTM=0.199 tol=12 2024-07-10 03:04:51,389 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.6 pTM=0.45 ipTM=0.199 tol=9.96 2024-07-10 03:06:19,484 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.4 pTM=0.454 ipTM=0.193 tol=5.64 2024-07-10 03:07:47,462 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.4 pTM=0.453 ipTM=0.193 tol=4.23 2024-07-10 03:09:15,417 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.2 pTM=0.454 ipTM=0.196 tol=4.56 2024-07-10 03:10:43,383 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.6 pTM=0.456 ipTM=0.194 tol=5.53 2024-07-10 03:12:11,300 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.6 pTM=0.457 ipTM=0.194 tol=3.91 2024-07-10 03:13:39,328 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.5 pTM=0.455 ipTM=0.197 tol=4.61 2024-07-10 03:15:07,219 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.8 pTM=0.458 ipTM=0.202 tol=3.78 2024-07-10 03:16:35,101 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.5 pTM=0.457 ipTM=0.203 tol=3.31 2024-07-10 03:18:02,981 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.7 pTM=0.459 ipTM=0.209 tol=2.96 2024-07-10 03:19:30,844 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.7 pTM=0.46 ipTM=0.217 tol=3.66 2024-07-10 03:20:58,754 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.7 pTM=0.459 ipTM=0.224 tol=3.36 2024-07-10 03:22:26,638 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60 pTM=0.46 ipTM=0.232 tol=3.87 2024-07-10 03:23:54,485 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.1 pTM=0.461 ipTM=0.246 tol=2.94 2024-07-10 03:25:22,315 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60 pTM=0.462 ipTM=0.247 tol=3.81 2024-07-10 03:26:50,150 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.9 pTM=0.462 ipTM=0.251 tol=2.78 2024-07-10 03:28:18,084 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.1 pTM=0.466 ipTM=0.259 tol=2.52 2024-07-10 03:29:45,897 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60 pTM=0.463 ipTM=0.25 tol=2.77 2024-07-10 03:31:13,685 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60 pTM=0.464 ipTM=0.251 tol=3.84 2024-07-10 03:32:41,454 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.3 pTM=0.467 ipTM=0.236 tol=2.45 2024-07-10 03:34:09,267 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60 pTM=0.465 ipTM=0.243 tol=2.33 2024-07-10 03:35:37,001 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.1 pTM=0.466 ipTM=0.256 tol=3.82 2024-07-10 03:37:04,851 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.2 pTM=0.463 ipTM=0.248 tol=4.09 2024-07-10 03:38:32,599 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.2 pTM=0.465 ipTM=0.235 tol=3.16 2024-07-10 03:40:00,309 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.3 pTM=0.469 ipTM=0.251 tol=3.6 2024-07-10 03:41:28,168 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.1 pTM=0.466 ipTM=0.247 tol=2.98 2024-07-10 03:42:55,924 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.1 pTM=0.466 ipTM=0.252 tol=2.24 2024-07-10 03:44:23,681 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.9 pTM=0.463 ipTM=0.25 tol=2.5 2024-07-10 03:45:51,422 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.9 pTM=0.464 ipTM=0.239 tol=2.77 2024-07-10 03:45:51,424 alphafold2_multimer_v3_model_3_seed_000 took 2724.2s (30 recycles) 2024-07-10 03:47:21,009 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.3 pTM=0.443 ipTM=0.166 2024-07-10 03:48:48,951 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.2 pTM=0.452 ipTM=0.242 tol=25.8 2024-07-10 03:50:16,885 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58 pTM=0.449 ipTM=0.194 tol=11.7 2024-07-10 03:51:44,824 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.6 pTM=0.453 ipTM=0.211 tol=6.35 2024-07-10 03:53:12,710 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.8 pTM=0.451 ipTM=0.207 tol=6.42 2024-07-10 03:54:40,687 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.7 pTM=0.45 ipTM=0.216 tol=6.3 2024-07-10 03:56:08,601 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.8 pTM=0.45 ipTM=0.183 tol=9.54 2024-07-10 03:57:36,551 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.9 pTM=0.448 ipTM=0.182 tol=5.84 2024-07-10 03:59:04,466 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.8 pTM=0.445 ipTM=0.176 tol=8.34 2024-07-10 04:00:32,355 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.5 pTM=0.448 ipTM=0.178 tol=13.7 2024-07-10 04:02:00,242 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.7 pTM=0.447 ipTM=0.185 tol=8.45 2024-07-10 04:03:28,132 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.5 pTM=0.446 ipTM=0.186 tol=5.42 2024-07-10 04:04:56,070 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.6 pTM=0.448 ipTM=0.191 tol=5.31 2024-07-10 04:06:24,155 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.2 pTM=0.448 ipTM=0.189 tol=7.52 2024-07-10 04:07:52,176 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.1 pTM=0.449 ipTM=0.19 tol=11.7 2024-07-10 04:09:20,141 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.1 pTM=0.447 ipTM=0.19 tol=10.6 2024-07-10 04:10:48,127 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.4 pTM=0.446 ipTM=0.188 tol=12.4 2024-07-10 04:12:16,071 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.3 pTM=0.446 ipTM=0.186 tol=4.75 2024-07-10 04:13:43,972 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.2 pTM=0.447 ipTM=0.19 tol=5.61 2024-07-10 04:15:11,866 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.2 pTM=0.447 ipTM=0.187 tol=6.63 2024-07-10 04:16:39,867 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.1 pTM=0.448 ipTM=0.188 tol=4.53 2024-07-10 04:18:07,754 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.9 pTM=0.448 ipTM=0.189 tol=9.04 2024-07-10 04:19:35,790 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.2 pTM=0.451 ipTM=0.191 tol=5.43 2024-07-10 04:21:03,733 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.2 pTM=0.449 ipTM=0.193 tol=7.49 2024-07-10 04:22:31,661 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.2 pTM=0.447 ipTM=0.188 tol=8.38 2024-07-10 04:23:59,595 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.5 pTM=0.45 ipTM=0.188 tol=4.19 2024-07-10 04:25:27,477 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.5 pTM=0.449 ipTM=0.188 tol=6.12 2024-07-10 04:26:55,396 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.1 pTM=0.446 ipTM=0.189 tol=5.67 2024-07-10 04:28:23,242 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.3 pTM=0.449 ipTM=0.188 tol=3.83 2024-07-10 04:29:51,121 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.1 pTM=0.446 ipTM=0.189 tol=5.88 2024-07-10 04:31:19,094 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.8 pTM=0.446 ipTM=0.189 tol=5.83 2024-07-10 04:31:19,096 alphafold2_multimer_v3_model_4_seed_000 took 2726.1s (30 recycles) 2024-07-10 04:32:48,750 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.3 pTM=0.45 ipTM=0.184 2024-07-10 04:34:16,571 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.1 pTM=0.465 ipTM=0.187 tol=14.9 2024-07-10 04:35:44,373 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.6 pTM=0.469 ipTM=0.194 tol=10.3 2024-07-10 04:37:12,230 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.7 pTM=0.469 ipTM=0.188 tol=5.87 2024-07-10 04:38:40,027 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.8 pTM=0.474 ipTM=0.253 tol=8.06 2024-07-10 04:40:07,784 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.8 pTM=0.475 ipTM=0.209 tol=4.92 2024-07-10 04:41:35,601 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.2 pTM=0.475 ipTM=0.197 tol=3.52 2024-07-10 04:43:03,445 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.9 pTM=0.474 ipTM=0.208 tol=2.51 2024-07-10 04:44:31,280 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.1 pTM=0.476 ipTM=0.206 tol=3.22 2024-07-10 04:45:59,150 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.9 pTM=0.472 ipTM=0.195 tol=2.4 2024-07-10 04:47:26,978 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59 pTM=0.475 ipTM=0.196 tol=3.01 2024-07-10 04:48:54,742 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59 pTM=0.475 ipTM=0.199 tol=4.19 2024-07-10 04:50:22,663 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.1 pTM=0.476 ipTM=0.206 tol=4.5 2024-07-10 04:51:50,487 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.1 pTM=0.476 ipTM=0.2 tol=4.01 2024-07-10 04:53:18,289 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.3 pTM=0.474 ipTM=0.195 tol=3.45 2024-07-10 04:54:46,136 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.1 pTM=0.473 ipTM=0.197 tol=1.92 2024-07-10 04:56:13,965 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59 pTM=0.472 ipTM=0.197 tol=2.12 2024-07-10 04:57:41,768 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59 pTM=0.472 ipTM=0.202 tol=2.86 2024-07-10 04:59:09,532 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59 pTM=0.474 ipTM=0.2 tol=9.79 2024-07-10 05:00:37,525 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.1 pTM=0.47 ipTM=0.195 tol=5.97 2024-07-10 05:02:05,433 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.4 pTM=0.471 ipTM=0.195 tol=5.49 2024-07-10 05:03:33,285 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.8 pTM=0.472 ipTM=0.197 tol=7.5 2024-07-10 05:05:01,083 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.9 pTM=0.473 ipTM=0.198 tol=6.57 2024-07-10 05:06:28,917 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.6 pTM=0.471 ipTM=0.198 tol=4.74 2024-07-10 05:07:56,770 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.9 pTM=0.471 ipTM=0.198 tol=3.26 2024-07-10 05:09:24,617 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60.1 pTM=0.469 ipTM=0.196 tol=3.58 2024-07-10 05:10:52,456 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.8 pTM=0.47 ipTM=0.196 tol=3.44 2024-07-10 05:12:20,208 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.8 pTM=0.471 ipTM=0.199 tol=1.87 2024-07-10 05:13:48,042 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.9 pTM=0.47 ipTM=0.2 tol=1.4 2024-07-10 05:15:15,798 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.9 pTM=0.471 ipTM=0.201 tol=1.57 2024-07-10 05:16:43,511 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.9 pTM=0.47 ipTM=0.204 tol=1.66 2024-07-10 05:16:43,513 alphafold2_multimer_v3_model_5_seed_000 took 2722.8s (30 recycles) 2024-07-10 05:16:45,146 reranking models by 'multimer' metric 2024-07-10 05:16:46,751 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 05:21:24,804 Relaxation took 279.7s 2024-07-10 05:21:24,804 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.2 pTM=0.454 ipTM=0.258 2024-07-10 05:24:25,582 Relaxation took 180.8s 2024-07-10 05:24:25,583 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.9 pTM=0.464 ipTM=0.239 2024-07-10 05:49:02,007 Relaxation took 1476.4s 2024-07-10 05:49:02,007 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.1 pTM=0.453 ipTM=0.212 2024-07-10 05:52:00,175 Relaxation took 178.2s 2024-07-10 05:52:00,175 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.9 pTM=0.47 ipTM=0.204 2024-07-10 05:56:09,061 Relaxation took 248.9s 2024-07-10 05:56:09,061 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.8 pTM=0.446 ipTM=0.189 2024-07-10 05:56:12,809 Done