2024-07-10 02:02:28,830 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 02:02:29,145 Running on GPU 2024-07-10 02:02:33,084 Found 6 citations for tools or databases 2024-07-10 02:02:33,084 Query 1/1: F157B_CP074 (length 460) 2024-07-10 02:02:33,572 Sleeping for 5s. Reason: PENDING 2024-07-10 02:02:39,040 Sleeping for 9s. Reason: RUNNING 2024-07-10 02:02:48,454 Sleeping for 8s. Reason: RUNNING 2024-07-10 02:02:56,882 Sleeping for 7s. Reason: RUNNING 2024-07-10 02:03:04,333 Sleeping for 8s. Reason: RUNNING 2024-07-10 02:03:12,944 Sleeping for 6s. Reason: RUNNING 2024-07-10 02:03:19,380 Sleeping for 7s. Reason: RUNNING 2024-07-10 02:03:26,814 Sleeping for 7s. Reason: RUNNING 2024-07-10 02:03:34,266 Sleeping for 9s. Reason: RUNNING 2024-07-10 02:03:44,544 Sleeping for 7s. Reason: PENDING 2024-07-10 02:03:51,968 Sleeping for 10s. Reason: RUNNING 2024-07-10 02:04:02,408 Sleeping for 6s. Reason: RUNNING 2024-07-10 02:04:08,839 Sleeping for 5s. Reason: RUNNING 2024-07-10 02:04:14,246 Sleeping for 7s. Reason: RUNNING 2024-07-10 02:04:22,498 Setting max_seq=229, max_extra_seq=1 2024-07-10 02:06:47,638 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=27.7 pTM=0.164 ipTM=0.157 2024-07-10 02:06:51,185 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=28.5 pTM=0.163 ipTM=0.147 tol=15.4 2024-07-10 02:06:54,728 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=27.8 pTM=0.164 ipTM=0.156 tol=9.64 2024-07-10 02:06:58,273 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=28.8 pTM=0.165 ipTM=0.154 tol=5.42 2024-07-10 02:07:01,813 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=29.2 pTM=0.164 ipTM=0.156 tol=5.81 2024-07-10 02:07:05,351 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=29.5 pTM=0.163 ipTM=0.153 tol=2.9 2024-07-10 02:07:08,887 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=30.2 pTM=0.164 ipTM=0.152 tol=2.09 2024-07-10 02:07:12,425 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=30.2 pTM=0.163 ipTM=0.153 tol=1.74 2024-07-10 02:07:15,961 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=29.9 pTM=0.162 ipTM=0.154 tol=3.26 2024-07-10 02:07:19,500 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=30.7 pTM=0.164 ipTM=0.152 tol=1.03 2024-07-10 02:07:23,041 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=30.6 pTM=0.163 ipTM=0.153 tol=1 2024-07-10 02:07:26,578 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=30.9 pTM=0.163 ipTM=0.151 tol=1.42 2024-07-10 02:07:30,118 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=30.3 pTM=0.162 ipTM=0.155 tol=1.03 2024-07-10 02:07:33,658 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=30.4 pTM=0.163 ipTM=0.152 tol=1.11 2024-07-10 02:07:37,198 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=30.2 pTM=0.162 ipTM=0.154 tol=0.869 2024-07-10 02:07:40,737 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=30.8 pTM=0.163 ipTM=0.154 tol=1.01 2024-07-10 02:07:44,276 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=31.5 pTM=0.164 ipTM=0.152 tol=1.47 2024-07-10 02:07:47,815 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=30.8 pTM=0.163 ipTM=0.152 tol=0.771 2024-07-10 02:07:51,350 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=30.7 pTM=0.163 ipTM=0.15 tol=1.67 2024-07-10 02:07:54,888 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=30.9 pTM=0.163 ipTM=0.151 tol=1.02 2024-07-10 02:07:58,424 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=30.7 pTM=0.162 ipTM=0.153 tol=1.22 2024-07-10 02:08:01,959 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=31 pTM=0.164 ipTM=0.151 tol=1.66 2024-07-10 02:08:05,495 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=30.9 pTM=0.164 ipTM=0.149 tol=7.56 2024-07-10 02:08:09,029 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=30.6 pTM=0.163 ipTM=0.147 tol=3.39 2024-07-10 02:08:12,568 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=30.2 pTM=0.163 ipTM=0.149 tol=5.81 2024-07-10 02:08:16,106 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=30.9 pTM=0.164 ipTM=0.148 tol=2.6 2024-07-10 02:08:19,645 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=30.9 pTM=0.163 ipTM=0.15 tol=1.81 2024-07-10 02:08:23,185 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=30.8 pTM=0.165 ipTM=0.151 tol=2.32 2024-07-10 02:08:26,724 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=31.2 pTM=0.165 ipTM=0.147 tol=1.9 2024-07-10 02:08:30,266 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=29.8 pTM=0.161 ipTM=0.152 tol=2.67 2024-07-10 02:08:33,803 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=30.8 pTM=0.165 ipTM=0.149 tol=2.94 2024-07-10 02:08:33,804 alphafold2_multimer_v3_model_1_seed_000 took 246.2s (30 recycles) 2024-07-10 02:08:37,490 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=24.4 pTM=0.172 ipTM=0.153 2024-07-10 02:08:41,022 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=25.2 pTM=0.17 ipTM=0.145 tol=8.96 2024-07-10 02:08:44,550 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=25.9 pTM=0.172 ipTM=0.149 tol=6.95 2024-07-10 02:08:48,078 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=25.9 pTM=0.169 ipTM=0.146 tol=3.62 2024-07-10 02:08:51,604 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=26.2 pTM=0.168 ipTM=0.144 tol=3.15 2024-07-10 02:08:55,128 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=26.2 pTM=0.166 ipTM=0.141 tol=1.86 2024-07-10 02:08:58,653 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=25.9 pTM=0.167 ipTM=0.14 tol=8.32 2024-07-10 02:09:02,174 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=25.9 pTM=0.163 ipTM=0.14 tol=6.22 2024-07-10 02:09:05,701 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=26.2 pTM=0.162 ipTM=0.14 tol=5.44 2024-07-10 02:09:09,228 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=26.3 pTM=0.162 ipTM=0.14 tol=4.28 2024-07-10 02:09:12,759 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=26.1 pTM=0.162 ipTM=0.139 tol=4.33 2024-07-10 02:09:16,289 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=26 pTM=0.164 ipTM=0.139 tol=7.27 2024-07-10 02:09:19,814 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=26.1 pTM=0.165 ipTM=0.142 tol=4.38 2024-07-10 02:09:23,339 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=26.1 pTM=0.164 ipTM=0.142 tol=3.9 2024-07-10 02:09:26,865 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=26 pTM=0.164 ipTM=0.144 tol=1.59 2024-07-10 02:09:30,394 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=26.5 pTM=0.165 ipTM=0.146 tol=2.45 2024-07-10 02:09:33,923 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=26.7 pTM=0.166 ipTM=0.144 tol=2.54 2024-07-10 02:09:37,453 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=26.1 pTM=0.165 ipTM=0.144 tol=5.19 2024-07-10 02:09:40,981 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=25.9 pTM=0.165 ipTM=0.145 tol=5.44 2024-07-10 02:09:44,514 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=26.2 pTM=0.165 ipTM=0.146 tol=5.61 2024-07-10 02:09:48,045 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=25.7 pTM=0.164 ipTM=0.146 tol=2.27 2024-07-10 02:09:51,574 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=26.3 pTM=0.165 ipTM=0.144 tol=2.74 2024-07-10 02:09:55,105 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=26.4 pTM=0.164 ipTM=0.143 tol=1.72 2024-07-10 02:09:58,636 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=26.1 pTM=0.164 ipTM=0.143 tol=2.88 2024-07-10 02:10:02,168 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=26 pTM=0.165 ipTM=0.141 tol=3.24 2024-07-10 02:10:05,699 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=26 pTM=0.165 ipTM=0.141 tol=2.75 2024-07-10 02:10:09,232 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=26.3 pTM=0.166 ipTM=0.141 tol=1.58 2024-07-10 02:10:12,764 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=26.3 pTM=0.167 ipTM=0.142 tol=1.59 2024-07-10 02:10:16,296 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=26.5 pTM=0.168 ipTM=0.14 tol=2.79 2024-07-10 02:10:19,827 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=26.2 pTM=0.165 ipTM=0.14 tol=2.58 2024-07-10 02:10:23,361 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=26.5 pTM=0.166 ipTM=0.139 tol=2.78 2024-07-10 02:10:23,361 alphafold2_multimer_v3_model_2_seed_000 took 109.4s (30 recycles) 2024-07-10 02:10:27,061 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=26.4 pTM=0.159 ipTM=0.139 2024-07-10 02:10:30,626 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=28.1 pTM=0.162 ipTM=0.164 tol=20.7 2024-07-10 02:10:34,188 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=28.3 pTM=0.165 ipTM=0.171 tol=10.9 2024-07-10 02:10:37,750 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=28.4 pTM=0.167 ipTM=0.178 tol=5.98 2024-07-10 02:10:41,317 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=28.6 pTM=0.167 ipTM=0.182 tol=6.64 2024-07-10 02:10:44,883 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=28.6 pTM=0.167 ipTM=0.184 tol=6.78 2024-07-10 02:10:48,451 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=29.1 pTM=0.167 ipTM=0.187 tol=3.69 2024-07-10 02:10:52,010 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=29.2 pTM=0.166 ipTM=0.189 tol=3.56 2024-07-10 02:10:55,570 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=28.3 pTM=0.165 ipTM=0.194 tol=2.15 2024-07-10 02:10:59,135 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=29 pTM=0.165 ipTM=0.189 tol=1.41 2024-07-10 02:11:02,697 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=29 pTM=0.166 ipTM=0.194 tol=1.26 2024-07-10 02:11:06,263 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=29 pTM=0.165 ipTM=0.191 tol=1.11 2024-07-10 02:11:09,823 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=28.9 pTM=0.166 ipTM=0.193 tol=1.31 2024-07-10 02:11:13,388 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=29 pTM=0.166 ipTM=0.192 tol=1.79 2024-07-10 02:11:16,955 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=29.3 pTM=0.165 ipTM=0.196 tol=1.51 2024-07-10 02:11:20,522 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=29.2 pTM=0.166 ipTM=0.194 tol=2.08 2024-07-10 02:11:24,090 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=29.1 pTM=0.165 ipTM=0.196 tol=4.41 2024-07-10 02:11:27,659 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=28.6 pTM=0.165 ipTM=0.197 tol=3.89 2024-07-10 02:11:31,226 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=28.9 pTM=0.165 ipTM=0.197 tol=2.75 2024-07-10 02:11:34,799 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=29 pTM=0.164 ipTM=0.196 tol=2.54 2024-07-10 02:11:38,371 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=29 pTM=0.164 ipTM=0.199 tol=3.36 2024-07-10 02:11:41,941 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=29 pTM=0.165 ipTM=0.198 tol=4.17 2024-07-10 02:11:45,511 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=29.2 pTM=0.165 ipTM=0.199 tol=1.7 2024-07-10 02:11:49,079 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=28.6 pTM=0.164 ipTM=0.197 tol=2.47 2024-07-10 02:11:52,651 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=28.7 pTM=0.164 ipTM=0.196 tol=1.7 2024-07-10 02:11:56,220 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=29 pTM=0.164 ipTM=0.196 tol=2.95 2024-07-10 02:11:59,793 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=29.1 pTM=0.164 ipTM=0.198 tol=1.57 2024-07-10 02:12:03,366 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=29.2 pTM=0.165 ipTM=0.2 tol=1.27 2024-07-10 02:12:06,937 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=29 pTM=0.165 ipTM=0.197 tol=1.38 2024-07-10 02:12:10,505 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=28.2 pTM=0.164 ipTM=0.199 tol=2.03 2024-07-10 02:12:14,075 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=29 pTM=0.165 ipTM=0.196 tol=2.34 2024-07-10 02:12:14,075 alphafold2_multimer_v3_model_3_seed_000 took 110.6s (30 recycles) 2024-07-10 02:12:17,757 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=27.3 pTM=0.171 ipTM=0.14 2024-07-10 02:12:21,319 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=29.4 pTM=0.162 ipTM=0.136 tol=18.5 2024-07-10 02:12:24,875 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=30.5 pTM=0.162 ipTM=0.155 tol=6 2024-07-10 02:12:28,431 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=30.9 pTM=0.164 ipTM=0.155 tol=3.46 2024-07-10 02:12:31,982 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=30.8 pTM=0.165 ipTM=0.157 tol=2.61 2024-07-10 02:12:35,537 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=31.2 pTM=0.165 ipTM=0.156 tol=3.39 2024-07-10 02:12:39,090 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=31.3 pTM=0.166 ipTM=0.157 tol=3.82 2024-07-10 02:12:42,645 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=31.3 pTM=0.166 ipTM=0.157 tol=1.37 2024-07-10 02:12:46,199 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=31.2 pTM=0.166 ipTM=0.158 tol=2.43 2024-07-10 02:12:49,756 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=31.1 pTM=0.166 ipTM=0.157 tol=4.67 2024-07-10 02:12:53,310 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=31.2 pTM=0.166 ipTM=0.157 tol=2.96 2024-07-10 02:12:56,861 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=30.8 pTM=0.164 ipTM=0.159 tol=1.81 2024-07-10 02:13:00,412 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=30.8 pTM=0.165 ipTM=0.161 tol=1.66 2024-07-10 02:13:03,962 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=30.8 pTM=0.165 ipTM=0.159 tol=2.49 2024-07-10 02:13:07,512 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=30.9 pTM=0.166 ipTM=0.158 tol=2.16 2024-07-10 02:13:11,062 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=31 pTM=0.167 ipTM=0.157 tol=1.24 2024-07-10 02:13:14,610 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=31.4 pTM=0.166 ipTM=0.154 tol=1.43 2024-07-10 02:13:18,157 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=30.8 pTM=0.166 ipTM=0.157 tol=1.46 2024-07-10 02:13:21,700 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=31.1 pTM=0.168 ipTM=0.159 tol=2.31 2024-07-10 02:13:25,247 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=31 pTM=0.169 ipTM=0.16 tol=3.51 2024-07-10 02:13:28,793 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=30.8 pTM=0.167 ipTM=0.159 tol=1.73 2024-07-10 02:13:32,339 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=31 pTM=0.168 ipTM=0.16 tol=0.76 2024-07-10 02:13:35,883 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=30.9 pTM=0.167 ipTM=0.159 tol=1.09 2024-07-10 02:13:39,428 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=30.8 pTM=0.167 ipTM=0.156 tol=2.02 2024-07-10 02:13:42,976 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=31 pTM=0.168 ipTM=0.157 tol=1.82 2024-07-10 02:13:46,521 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=30.9 pTM=0.168 ipTM=0.157 tol=1.89 2024-07-10 02:13:50,070 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=31.3 pTM=0.167 ipTM=0.156 tol=2.33 2024-07-10 02:13:53,614 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=31.1 pTM=0.167 ipTM=0.157 tol=2.13 2024-07-10 02:13:57,163 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=31.5 pTM=0.167 ipTM=0.155 tol=2.05 2024-07-10 02:14:00,708 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=30.2 pTM=0.166 ipTM=0.154 tol=2.05 2024-07-10 02:14:04,255 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=31.2 pTM=0.168 ipTM=0.153 tol=1.23 2024-07-10 02:14:04,256 alphafold2_multimer_v3_model_4_seed_000 took 110.0s (30 recycles) 2024-07-10 02:14:07,956 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=24.4 pTM=0.144 ipTM=0.174 2024-07-10 02:14:11,527 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=25.8 pTM=0.149 ipTM=0.172 tol=17.9 2024-07-10 02:14:15,092 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=27.3 pTM=0.152 ipTM=0.165 tol=12.5 2024-07-10 02:14:18,662 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=27.9 pTM=0.155 ipTM=0.155 tol=6.55 2024-07-10 02:14:22,235 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=28.2 pTM=0.153 ipTM=0.146 tol=3.86 2024-07-10 02:14:25,809 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=28.5 pTM=0.154 ipTM=0.14 tol=3.22 2024-07-10 02:14:29,386 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=29.1 pTM=0.156 ipTM=0.141 tol=3.73 2024-07-10 02:14:32,960 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=29.2 pTM=0.156 ipTM=0.141 tol=3.03 2024-07-10 02:14:36,535 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=29 pTM=0.155 ipTM=0.142 tol=1.58 2024-07-10 02:14:40,107 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=29.1 pTM=0.155 ipTM=0.136 tol=2.21 2024-07-10 02:14:43,682 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=29 pTM=0.155 ipTM=0.138 tol=1.66 2024-07-10 02:14:47,255 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=29 pTM=0.154 ipTM=0.138 tol=2.39 2024-07-10 02:14:50,827 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=28.8 pTM=0.154 ipTM=0.144 tol=1.95 2024-07-10 02:14:54,403 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=29.1 pTM=0.155 ipTM=0.141 tol=2.79 2024-07-10 02:14:57,976 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=28.8 pTM=0.154 ipTM=0.146 tol=7.3 2024-07-10 02:15:01,553 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=29.2 pTM=0.155 ipTM=0.146 tol=5.38 2024-07-10 02:15:05,128 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=29.7 pTM=0.154 ipTM=0.136 tol=6.46 2024-07-10 02:15:08,702 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=28.9 pTM=0.154 ipTM=0.138 tol=6.17 2024-07-10 02:15:12,278 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=28.9 pTM=0.154 ipTM=0.137 tol=1.93 2024-07-10 02:15:15,852 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=28.8 pTM=0.153 ipTM=0.139 tol=2.73 2024-07-10 02:15:19,431 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=28.8 pTM=0.153 ipTM=0.14 tol=2.19 2024-07-10 02:15:23,003 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=28.8 pTM=0.154 ipTM=0.143 tol=2.6 2024-07-10 02:15:26,578 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=29 pTM=0.155 ipTM=0.145 tol=1.83 2024-07-10 02:15:30,154 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=28.7 pTM=0.153 ipTM=0.145 tol=1.92 2024-07-10 02:15:33,730 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=28.6 pTM=0.152 ipTM=0.149 tol=2.2 2024-07-10 02:15:37,307 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=28.7 pTM=0.152 ipTM=0.15 tol=2.51 2024-07-10 02:15:40,879 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=28.7 pTM=0.151 ipTM=0.151 tol=2.03 2024-07-10 02:15:44,454 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=28.6 pTM=0.153 ipTM=0.154 tol=6.56 2024-07-10 02:15:48,029 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=28.7 pTM=0.154 ipTM=0.153 tol=5.21 2024-07-10 02:15:51,605 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=28.5 pTM=0.152 ipTM=0.15 tol=6.13 2024-07-10 02:15:55,183 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=28.9 pTM=0.154 ipTM=0.149 tol=5.98 2024-07-10 02:15:55,184 alphafold2_multimer_v3_model_5_seed_000 took 110.8s (30 recycles) 2024-07-10 02:15:55,342 reranking models by 'multimer' metric 2024-07-10 02:15:58,341 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 02:16:27,819 Relaxation took 32.5s 2024-07-10 02:16:27,820 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=29 pTM=0.165 ipTM=0.196 2024-07-10 02:16:52,528 Relaxation took 24.7s 2024-07-10 02:16:52,528 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=31.2 pTM=0.168 ipTM=0.153 2024-07-10 02:17:17,639 Relaxation took 25.1s 2024-07-10 02:17:17,639 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=30.8 pTM=0.165 ipTM=0.149 2024-07-10 02:17:48,521 Relaxation took 30.9s 2024-07-10 02:17:48,522 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=28.9 pTM=0.154 ipTM=0.149 2024-07-10 02:18:18,577 Relaxation took 30.1s 2024-07-10 02:18:18,577 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=26.5 pTM=0.166 ipTM=0.139 2024-07-10 02:18:19,516 Done