2024-07-10 02:25:57,252 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 02:25:57,567 Running on GPU 2024-07-10 02:26:01,749 Found 6 citations for tools or databases 2024-07-10 02:26:01,749 Query 1/1: F90AA_SPADH (length 601) 2024-07-10 02:26:02,187 Sleeping for 8s. Reason: PENDING 2024-07-10 02:26:11,479 Sleeping for 9s. Reason: RUNNING 2024-07-10 02:26:20,908 Sleeping for 7s. Reason: RUNNING 2024-07-10 02:26:28,330 Sleeping for 9s. Reason: RUNNING 2024-07-10 02:26:37,769 Sleeping for 6s. Reason: RUNNING 2024-07-10 02:26:44,183 Sleeping for 7s. Reason: RUNNING 2024-07-10 02:26:56,594 Sleeping for 8s. Reason: PENDING 2024-07-10 02:27:05,003 Sleeping for 6s. Reason: RUNNING 2024-07-10 02:27:11,428 Sleeping for 5s. Reason: RUNNING 2024-07-10 02:27:16,839 Sleeping for 5s. Reason: RUNNING 2024-07-10 02:27:22,255 Sleeping for 6s. Reason: RUNNING 2024-07-10 02:27:29,720 Setting max_seq=508, max_extra_seq=1978 2024-07-10 02:30:26,423 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=36.8 pTM=0.285 ipTM=0.271 2024-07-10 02:30:33,706 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=35.7 pTM=0.278 ipTM=0.213 tol=18.4 2024-07-10 02:30:40,993 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=35.2 pTM=0.283 ipTM=0.221 tol=12.5 2024-07-10 02:30:48,299 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=36 pTM=0.281 ipTM=0.21 tol=5 2024-07-10 02:30:55,596 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=35.7 pTM=0.282 ipTM=0.219 tol=4.11 2024-07-10 02:31:02,898 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=35.4 pTM=0.282 ipTM=0.231 tol=9.14 2024-07-10 02:31:10,195 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=36 pTM=0.281 ipTM=0.233 tol=6.11 2024-07-10 02:31:17,493 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=34.8 pTM=0.284 ipTM=0.25 tol=3.7 2024-07-10 02:31:24,793 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=35.8 pTM=0.282 ipTM=0.241 tol=3.02 2024-07-10 02:31:32,098 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=35.2 pTM=0.286 ipTM=0.254 tol=3.29 2024-07-10 02:31:39,413 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=35.2 pTM=0.281 ipTM=0.244 tol=2.62 2024-07-10 02:31:46,736 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=35.6 pTM=0.284 ipTM=0.256 tol=3.79 2024-07-10 02:31:54,065 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=35.7 pTM=0.279 ipTM=0.245 tol=3.21 2024-07-10 02:32:01,401 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=35.5 pTM=0.286 ipTM=0.266 tol=6.3 2024-07-10 02:32:08,727 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=35.2 pTM=0.279 ipTM=0.241 tol=7.3 2024-07-10 02:32:16,061 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=34.9 pTM=0.281 ipTM=0.241 tol=7.29 2024-07-10 02:32:23,394 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=35 pTM=0.282 ipTM=0.244 tol=8.21 2024-07-10 02:32:30,735 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=35.8 pTM=0.286 ipTM=0.253 tol=8.02 2024-07-10 02:32:38,079 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=35.8 pTM=0.28 ipTM=0.251 tol=5.01 2024-07-10 02:32:45,423 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=35.7 pTM=0.287 ipTM=0.272 tol=5.39 2024-07-10 02:32:52,764 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=36 pTM=0.281 ipTM=0.253 tol=5.37 2024-07-10 02:33:00,099 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=36.3 pTM=0.289 ipTM=0.266 tol=3.13 2024-07-10 02:33:07,437 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=35.4 pTM=0.28 ipTM=0.245 tol=4.57 2024-07-10 02:33:14,774 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=36 pTM=0.284 ipTM=0.258 tol=4.75 2024-07-10 02:33:22,111 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=35.9 pTM=0.279 ipTM=0.238 tol=3.86 2024-07-10 02:33:29,452 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=35.3 pTM=0.287 ipTM=0.258 tol=7.68 2024-07-10 02:33:36,796 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=35.5 pTM=0.278 ipTM=0.238 tol=5.76 2024-07-10 02:33:44,147 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=36.8 pTM=0.284 ipTM=0.255 tol=5.94 2024-07-10 02:33:51,490 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=35.6 pTM=0.28 ipTM=0.24 tol=4.02 2024-07-10 02:33:58,839 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=36.2 pTM=0.288 ipTM=0.267 tol=4.25 2024-07-10 02:34:06,171 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=35.1 pTM=0.281 ipTM=0.249 tol=4.87 2024-07-10 02:34:06,172 alphafold2_multimer_v3_model_1_seed_000 took 391.5s (30 recycles) 2024-07-10 02:34:13,727 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=34 pTM=0.292 ipTM=0.25 2024-07-10 02:34:21,051 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=33.6 pTM=0.283 ipTM=0.21 tol=15.8 2024-07-10 02:34:28,380 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=33.9 pTM=0.28 ipTM=0.208 tol=16.7 2024-07-10 02:34:35,714 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=34 pTM=0.28 ipTM=0.213 tol=9.73 2024-07-10 02:34:43,046 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=33.4 pTM=0.28 ipTM=0.214 tol=11.4 2024-07-10 02:34:50,375 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=33.7 pTM=0.286 ipTM=0.241 tol=8.85 2024-07-10 02:34:57,710 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=33.8 pTM=0.281 ipTM=0.224 tol=4.94 2024-07-10 02:35:05,044 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=34.2 pTM=0.294 ipTM=0.294 tol=4.36 2024-07-10 02:35:12,378 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=33.8 pTM=0.288 ipTM=0.247 tol=6.55 2024-07-10 02:35:19,700 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=34.3 pTM=0.289 ipTM=0.242 tol=4.36 2024-07-10 02:35:27,019 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=33.6 pTM=0.282 ipTM=0.222 tol=4.28 2024-07-10 02:35:34,350 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=34.3 pTM=0.29 ipTM=0.263 tol=3.68 2024-07-10 02:35:41,678 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=33.8 pTM=0.287 ipTM=0.246 tol=3.6 2024-07-10 02:35:49,006 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=33.9 pTM=0.288 ipTM=0.243 tol=4.14 2024-07-10 02:35:56,333 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=33.5 pTM=0.287 ipTM=0.244 tol=3.82 2024-07-10 02:36:03,662 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=34.1 pTM=0.285 ipTM=0.226 tol=3.46 2024-07-10 02:36:10,986 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=33.8 pTM=0.289 ipTM=0.249 tol=4.77 2024-07-10 02:36:18,321 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=34 pTM=0.283 ipTM=0.23 tol=4.32 2024-07-10 02:36:25,643 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=34.4 pTM=0.285 ipTM=0.245 tol=2.74 2024-07-10 02:36:32,975 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=33.5 pTM=0.286 ipTM=0.23 tol=3 2024-07-10 02:36:40,298 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=34.3 pTM=0.284 ipTM=0.238 tol=4.95 2024-07-10 02:36:47,621 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=33.5 pTM=0.285 ipTM=0.225 tol=7.07 2024-07-10 02:36:54,950 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=33.9 pTM=0.288 ipTM=0.244 tol=4.91 2024-07-10 02:37:02,274 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=33.9 pTM=0.284 ipTM=0.227 tol=5.09 2024-07-10 02:37:09,610 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=33.7 pTM=0.288 ipTM=0.245 tol=6.9 2024-07-10 02:37:16,943 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=33.6 pTM=0.288 ipTM=0.238 tol=5.5 2024-07-10 02:37:24,259 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=34.2 pTM=0.286 ipTM=0.23 tol=6.61 2024-07-10 02:37:31,581 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=34.2 pTM=0.282 ipTM=0.225 tol=3.69 2024-07-10 02:37:38,908 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=33.7 pTM=0.284 ipTM=0.224 tol=4.78 2024-07-10 02:37:46,238 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=34.2 pTM=0.283 ipTM=0.234 tol=3.05 2024-07-10 02:37:53,570 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=33.8 pTM=0.281 ipTM=0.219 tol=2.84 2024-07-10 02:37:53,571 alphafold2_multimer_v3_model_2_seed_000 took 227.2s (30 recycles) 2024-07-10 02:38:01,169 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33.4 pTM=0.284 ipTM=0.223 2024-07-10 02:38:08,559 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=33.5 pTM=0.276 ipTM=0.207 tol=16.3 2024-07-10 02:38:15,953 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=33.9 pTM=0.273 ipTM=0.225 tol=11.2 2024-07-10 02:38:23,354 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=34.4 pTM=0.275 ipTM=0.227 tol=8.55 2024-07-10 02:38:30,740 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=34.4 pTM=0.271 ipTM=0.214 tol=9.44 2024-07-10 02:38:38,112 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=33.9 pTM=0.278 ipTM=0.225 tol=10.8 2024-07-10 02:38:45,508 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=34.3 pTM=0.273 ipTM=0.222 tol=11.8 2024-07-10 02:38:52,905 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=34.2 pTM=0.276 ipTM=0.236 tol=9.25 2024-07-10 02:39:00,301 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=34.4 pTM=0.276 ipTM=0.234 tol=11 2024-07-10 02:39:07,699 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=34.2 pTM=0.276 ipTM=0.228 tol=9.79 2024-07-10 02:39:15,098 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=33.8 pTM=0.274 ipTM=0.232 tol=13.9 2024-07-10 02:39:22,501 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=34.7 pTM=0.276 ipTM=0.229 tol=12.8 2024-07-10 02:39:29,891 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=34.5 pTM=0.272 ipTM=0.228 tol=10.6 2024-07-10 02:39:37,284 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=33.4 pTM=0.277 ipTM=0.233 tol=7.43 2024-07-10 02:39:44,679 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=33.6 pTM=0.274 ipTM=0.237 tol=9.89 2024-07-10 02:39:52,068 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=34.2 pTM=0.275 ipTM=0.22 tol=11.5 2024-07-10 02:39:59,461 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=33.2 pTM=0.274 ipTM=0.234 tol=12 2024-07-10 02:40:06,858 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=34.5 pTM=0.276 ipTM=0.234 tol=10.7 2024-07-10 02:40:14,254 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=34.2 pTM=0.273 ipTM=0.234 tol=9.08 2024-07-10 02:40:21,644 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=34.3 pTM=0.277 ipTM=0.239 tol=4.82 2024-07-10 02:40:29,037 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=34.4 pTM=0.275 ipTM=0.238 tol=3.94 2024-07-10 02:40:36,421 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=33.8 pTM=0.277 ipTM=0.243 tol=5.16 2024-07-10 02:40:43,808 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=33.5 pTM=0.274 ipTM=0.226 tol=6.29 2024-07-10 02:40:51,201 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=34.1 pTM=0.275 ipTM=0.237 tol=7.03 2024-07-10 02:40:58,590 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=33.6 pTM=0.274 ipTM=0.226 tol=7.62 2024-07-10 02:41:05,968 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=33.6 pTM=0.276 ipTM=0.237 tol=6.66 2024-07-10 02:41:13,357 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=33.8 pTM=0.274 ipTM=0.222 tol=11.9 2024-07-10 02:41:20,772 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=34.8 pTM=0.274 ipTM=0.241 tol=10.8 2024-07-10 02:41:28,175 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=34.3 pTM=0.275 ipTM=0.229 tol=8.67 2024-07-10 02:41:35,569 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=35.1 pTM=0.275 ipTM=0.23 tol=7.92 2024-07-10 02:41:42,955 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=33.6 pTM=0.275 ipTM=0.236 tol=12.8 2024-07-10 02:41:42,956 alphafold2_multimer_v3_model_3_seed_000 took 229.1s (30 recycles) 2024-07-10 02:41:50,536 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=33.8 pTM=0.283 ipTM=0.207 2024-07-10 02:41:57,868 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=33.7 pTM=0.281 ipTM=0.209 tol=12.5 2024-07-10 02:42:05,211 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=33.7 pTM=0.277 ipTM=0.216 tol=6.87 2024-07-10 02:42:12,555 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=33.9 pTM=0.28 ipTM=0.223 tol=8.32 2024-07-10 02:42:19,898 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=34 pTM=0.281 ipTM=0.244 tol=8.66 2024-07-10 02:42:27,252 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=33.7 pTM=0.279 ipTM=0.213 tol=5.99 2024-07-10 02:42:34,608 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=35.7 pTM=0.301 ipTM=0.51 tol=16.8 2024-07-10 02:42:41,965 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=34.3 pTM=0.284 ipTM=0.358 tol=10 2024-07-10 02:42:49,330 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=34 pTM=0.281 ipTM=0.257 tol=6.93 2024-07-10 02:42:56,695 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=34.2 pTM=0.27 ipTM=0.224 tol=5.73 2024-07-10 02:43:04,052 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=34.1 pTM=0.275 ipTM=0.248 tol=19.1 2024-07-10 02:43:11,398 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=33.9 pTM=0.274 ipTM=0.221 tol=13.6 2024-07-10 02:43:18,757 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=34.6 pTM=0.291 ipTM=0.358 tol=22 2024-07-10 02:43:26,111 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=33.1 pTM=0.274 ipTM=0.225 tol=18.9 2024-07-10 02:43:33,458 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=34 pTM=0.273 ipTM=0.213 tol=13.7 2024-07-10 02:43:40,816 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=35.3 pTM=0.301 ipTM=0.456 tol=15.5 2024-07-10 02:43:48,168 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=35.9 pTM=0.313 ipTM=0.614 tol=6.91 2024-07-10 02:43:55,542 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=36.4 pTM=0.31 ipTM=0.542 tol=5.14 2024-07-10 02:44:02,915 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=36.1 pTM=0.307 ipTM=0.545 tol=4.32 2024-07-10 02:44:10,272 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=35.7 pTM=0.309 ipTM=0.5 tol=4.05 2024-07-10 02:44:17,634 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=36.2 pTM=0.315 ipTM=0.585 tol=5.28 2024-07-10 02:44:24,993 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=35.4 pTM=0.31 ipTM=0.514 tol=4.59 2024-07-10 02:44:32,357 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=36 pTM=0.313 ipTM=0.567 tol=5.51 2024-07-10 02:44:39,716 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=35.7 pTM=0.308 ipTM=0.517 tol=6.95 2024-07-10 02:44:47,079 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=36.1 pTM=0.319 ipTM=0.602 tol=4.89 2024-07-10 02:44:54,426 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=35.8 pTM=0.314 ipTM=0.554 tol=4.9 2024-07-10 02:45:01,788 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=35.6 pTM=0.311 ipTM=0.55 tol=6.83 2024-07-10 02:45:09,158 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=36.2 pTM=0.302 ipTM=0.512 tol=7.06 2024-07-10 02:45:16,520 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=35.7 pTM=0.306 ipTM=0.519 tol=6.63 2024-07-10 02:45:23,891 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=35.8 pTM=0.302 ipTM=0.503 tol=3.81 2024-07-10 02:45:31,249 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=36.2 pTM=0.311 ipTM=0.569 tol=4.9 2024-07-10 02:45:31,250 alphafold2_multimer_v3_model_4_seed_000 took 228.1s (30 recycles) 2024-07-10 02:45:38,884 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=32.6 pTM=0.27 ipTM=0.21 2024-07-10 02:45:46,302 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=33 pTM=0.271 ipTM=0.238 tol=19.6 2024-07-10 02:45:53,719 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=33.5 pTM=0.264 ipTM=0.206 tol=8.12 2024-07-10 02:46:01,144 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=33.3 pTM=0.283 ipTM=0.406 tol=18.7 2024-07-10 02:46:08,574 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=33.5 pTM=0.263 ipTM=0.209 tol=14.8 2024-07-10 02:46:15,982 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=33.2 pTM=0.267 ipTM=0.225 tol=11.8 2024-07-10 02:46:23,404 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=34.7 pTM=0.305 ipTM=0.633 tol=10.9 2024-07-10 02:46:30,824 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=33.5 pTM=0.264 ipTM=0.226 tol=6.71 2024-07-10 02:46:38,251 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=33.7 pTM=0.266 ipTM=0.221 tol=6.21 2024-07-10 02:46:45,675 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=34.1 pTM=0.303 ipTM=0.589 tol=11.1 2024-07-10 02:46:53,102 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=33.9 pTM=0.265 ipTM=0.22 tol=9.77 2024-07-10 02:47:00,527 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=33.8 pTM=0.265 ipTM=0.221 tol=5.97 2024-07-10 02:47:07,955 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=34.6 pTM=0.301 ipTM=0.583 tol=9.96 2024-07-10 02:47:15,388 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=32.9 pTM=0.263 ipTM=0.214 tol=8.62 2024-07-10 02:47:22,820 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=33 pTM=0.262 ipTM=0.208 tol=17.2 2024-07-10 02:47:30,235 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=35.8 pTM=0.307 ipTM=0.683 tol=11.4 2024-07-10 02:47:37,641 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=35.6 pTM=0.307 ipTM=0.68 tol=9.65 2024-07-10 02:47:45,052 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=37.1 pTM=0.321 ipTM=0.656 tol=9.57 2024-07-10 02:47:52,458 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=35.7 pTM=0.306 ipTM=0.656 tol=7.37 2024-07-10 02:47:59,870 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=35.9 pTM=0.308 ipTM=0.656 tol=8.41 2024-07-10 02:48:07,277 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=36.2 pTM=0.303 ipTM=0.624 tol=3.85 2024-07-10 02:48:14,683 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=36.7 pTM=0.317 ipTM=0.632 tol=8.69 2024-07-10 02:48:22,087 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=35.1 pTM=0.302 ipTM=0.613 tol=6.13 2024-07-10 02:48:29,485 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=35.7 pTM=0.313 ipTM=0.656 tol=19.6 2024-07-10 02:48:36,884 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=35.3 pTM=0.3 ipTM=0.568 tol=7.38 2024-07-10 02:48:44,292 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=34.9 pTM=0.313 ipTM=0.594 tol=12.6 2024-07-10 02:48:51,696 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=34 pTM=0.292 ipTM=0.478 tol=10 2024-07-10 02:48:59,110 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=35.9 pTM=0.307 ipTM=0.656 tol=10.6 2024-07-10 02:49:06,518 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=35.8 pTM=0.307 ipTM=0.586 tol=9.99 2024-07-10 02:49:13,928 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=34.7 pTM=0.298 ipTM=0.557 tol=13.5 2024-07-10 02:49:21,335 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=34.8 pTM=0.309 ipTM=0.612 tol=11.9 2024-07-10 02:49:21,335 alphafold2_multimer_v3_model_5_seed_000 took 229.8s (30 recycles) 2024-07-10 02:49:21,573 reranking models by 'multimer' metric 2024-07-10 02:49:22,470 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 02:50:04,156 Relaxation took 42.6s 2024-07-10 02:50:04,156 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=34.8 pTM=0.309 ipTM=0.612 2024-07-10 02:50:45,785 Relaxation took 41.6s 2024-07-10 02:50:45,785 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=36.2 pTM=0.311 ipTM=0.569 2024-07-10 02:51:20,116 Relaxation took 34.3s 2024-07-10 02:51:20,116 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=35.1 pTM=0.281 ipTM=0.249 2024-07-10 02:51:58,375 Relaxation took 38.3s 2024-07-10 02:51:58,375 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=33.6 pTM=0.275 ipTM=0.236 2024-07-10 02:52:35,665 Relaxation took 37.3s 2024-07-10 02:52:35,665 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=33.8 pTM=0.281 ipTM=0.219 2024-07-10 02:52:36,823 Done