2024-07-10 05:06:29,945 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 05:06:30,262 Running on GPU 2024-07-10 05:06:34,381 Found 6 citations for tools or databases 2024-07-10 05:06:34,381 Query 1/1: FERM2_DPH6 (length 947) 2024-07-10 05:06:35,353 Sleeping for 5s. Reason: PENDING 2024-07-10 05:06:40,820 Sleeping for 8s. Reason: RUNNING 2024-07-10 05:06:49,255 Sleeping for 7s. Reason: RUNNING 2024-07-10 05:06:57,261 Sleeping for 6s. Reason: RUNNING 2024-07-10 05:07:03,674 Sleeping for 7s. Reason: RUNNING 2024-07-10 05:07:11,094 Sleeping for 5s. Reason: RUNNING 2024-07-10 05:07:17,237 Sleeping for 8s. Reason: RUNNING 2024-07-10 05:07:25,649 Sleeping for 10s. Reason: RUNNING 2024-07-10 05:07:36,353 Sleeping for 8s. Reason: RUNNING 2024-07-10 05:07:44,796 Sleeping for 7s. Reason: RUNNING 2024-07-10 05:07:52,222 Sleeping for 7s. Reason: RUNNING 2024-07-10 05:08:05,631 Sleeping for 8s. Reason: PENDING 2024-07-10 05:08:14,060 Sleeping for 5s. Reason: RUNNING 2024-07-10 05:08:19,473 Sleeping for 5s. Reason: RUNNING 2024-07-10 05:08:24,898 Sleeping for 8s. Reason: RUNNING 2024-07-10 05:08:33,324 Sleeping for 6s. Reason: RUNNING 2024-07-10 05:08:40,080 Sleeping for 5s. Reason: RUNNING 2024-07-10 05:08:45,517 Sleeping for 9s. Reason: RUNNING 2024-07-10 05:08:57,064 Setting max_seq=508, max_extra_seq=2048 2024-07-10 05:11:56,057 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=75.4 pTM=0.605 ipTM=0.206 2024-07-10 05:12:16,183 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.3 pTM=0.568 ipTM=0.169 tol=6.69 2024-07-10 05:12:36,369 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.9 pTM=0.55 ipTM=0.225 tol=1.95 2024-07-10 05:12:56,596 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75.5 pTM=0.544 ipTM=0.156 tol=3.69 2024-07-10 05:13:16,851 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74.8 pTM=0.534 ipTM=0.156 tol=1.94 2024-07-10 05:13:37,161 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=75.9 pTM=0.533 ipTM=0.165 tol=2.17 2024-07-10 05:13:57,471 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.4 pTM=0.538 ipTM=0.167 tol=1.76 2024-07-10 05:14:17,808 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=76.2 pTM=0.541 ipTM=0.157 tol=1.28 2024-07-10 05:14:38,129 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=75.2 pTM=0.533 ipTM=0.186 tol=1.56 2024-07-10 05:14:58,471 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=76.4 pTM=0.541 ipTM=0.167 tol=1.34 2024-07-10 05:15:18,792 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.4 pTM=0.536 ipTM=0.193 tol=1.29 2024-07-10 05:15:39,130 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=76.1 pTM=0.539 ipTM=0.158 tol=4.69 2024-07-10 05:15:59,466 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=75.2 pTM=0.527 ipTM=0.184 tol=3.74 2024-07-10 05:16:19,810 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=76.2 pTM=0.541 ipTM=0.156 tol=3.55 2024-07-10 05:16:40,143 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75.4 pTM=0.532 ipTM=0.164 tol=1.89 2024-07-10 05:17:00,482 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=76.1 pTM=0.529 ipTM=0.159 tol=2.09 2024-07-10 05:17:20,809 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75.4 pTM=0.534 ipTM=0.169 tol=1.83 2024-07-10 05:17:41,145 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=76.1 pTM=0.541 ipTM=0.154 tol=2.44 2024-07-10 05:18:01,470 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.2 pTM=0.535 ipTM=0.156 tol=0.746 2024-07-10 05:18:21,803 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=76.1 pTM=0.541 ipTM=0.153 tol=1.15 2024-07-10 05:18:42,127 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=75.4 pTM=0.536 ipTM=0.155 tol=1.17 2024-07-10 05:19:02,457 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=75.7 pTM=0.538 ipTM=0.155 tol=0.837 2024-07-10 05:19:22,779 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=75.1 pTM=0.538 ipTM=0.157 tol=0.73 2024-07-10 05:19:43,072 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=75.5 pTM=0.541 ipTM=0.184 tol=1.49 2024-07-10 05:20:03,379 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.8 pTM=0.537 ipTM=0.407 tol=2.51 2024-07-10 05:20:23,694 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.6 pTM=0.542 ipTM=0.292 tol=0.893 2024-07-10 05:20:44,021 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.2 pTM=0.533 ipTM=0.234 tol=1.36 2024-07-10 05:21:04,345 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.2 pTM=0.545 ipTM=0.213 tol=0.485 2024-07-10 05:21:04,346 alphafold2_multimer_v3_model_1_seed_000 took 719.6s (27 recycles) 2024-07-10 05:21:25,230 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74 pTM=0.726 ipTM=0.679 2024-07-10 05:21:45,600 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.8 pTM=0.583 ipTM=0.154 tol=9.07 2024-07-10 05:22:05,942 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.6 pTM=0.574 ipTM=0.151 tol=5.88 2024-07-10 05:22:26,284 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.8 pTM=0.565 ipTM=0.159 tol=3.13 2024-07-10 05:22:46,610 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=75.4 pTM=0.56 ipTM=0.158 tol=1.1 2024-07-10 05:23:06,946 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.9 pTM=0.56 ipTM=0.165 tol=0.751 2024-07-10 05:23:27,287 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75.5 pTM=0.554 ipTM=0.159 tol=2.14 2024-07-10 05:23:47,625 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75.9 pTM=0.553 ipTM=0.159 tol=1.91 2024-07-10 05:24:07,955 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=75.3 pTM=0.55 ipTM=0.156 tol=0.625 2024-07-10 05:24:28,316 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.8 pTM=0.546 ipTM=0.162 tol=1.49 2024-07-10 05:24:48,664 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.4 pTM=0.548 ipTM=0.163 tol=2.46 2024-07-10 05:25:08,995 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.6 pTM=0.547 ipTM=0.158 tol=3.88 2024-07-10 05:25:29,320 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75.4 pTM=0.548 ipTM=0.154 tol=0.681 2024-07-10 05:25:49,639 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75.7 pTM=0.551 ipTM=0.163 tol=0.962 2024-07-10 05:26:09,961 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75.5 pTM=0.548 ipTM=0.166 tol=3.21 2024-07-10 05:26:30,278 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.7 pTM=0.546 ipTM=0.159 tol=2.23 2024-07-10 05:26:50,602 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.4 pTM=0.545 ipTM=0.155 tol=0.888 2024-07-10 05:27:10,933 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.6 pTM=0.545 ipTM=0.154 tol=0.793 2024-07-10 05:27:31,260 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.4 pTM=0.545 ipTM=0.154 tol=2.01 2024-07-10 05:27:51,600 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.8 pTM=0.547 ipTM=0.151 tol=1.31 2024-07-10 05:28:11,925 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.5 pTM=0.548 ipTM=0.155 tol=1.36 2024-07-10 05:28:32,272 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.6 pTM=0.546 ipTM=0.154 tol=2.1 2024-07-10 05:28:52,611 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.2 pTM=0.549 ipTM=0.153 tol=1.82 2024-07-10 05:29:12,954 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.4 pTM=0.545 ipTM=0.155 tol=1.94 2024-07-10 05:29:33,293 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.5 pTM=0.544 ipTM=0.156 tol=1.7 2024-07-10 05:29:53,631 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.3 pTM=0.545 ipTM=0.156 tol=1.33 2024-07-10 05:30:13,986 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.4 pTM=0.547 ipTM=0.15 tol=1.54 2024-07-10 05:30:34,328 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.4 pTM=0.551 ipTM=0.163 tol=2.78 2024-07-10 05:30:54,679 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.5 pTM=0.546 ipTM=0.151 tol=2.04 2024-07-10 05:31:15,019 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.4 pTM=0.545 ipTM=0.155 tol=1.26 2024-07-10 05:31:35,373 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.4 pTM=0.548 ipTM=0.153 tol=1.48 2024-07-10 05:31:35,374 alphafold2_multimer_v3_model_2_seed_000 took 630.5s (30 recycles) 2024-07-10 05:31:56,283 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.1 pTM=0.643 ipTM=0.305 2024-07-10 05:32:16,621 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=75.9 pTM=0.601 ipTM=0.242 tol=2.14 2024-07-10 05:32:36,960 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=75.9 pTM=0.598 ipTM=0.258 tol=2.96 2024-07-10 05:32:57,317 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=76.2 pTM=0.587 ipTM=0.212 tol=1.31 2024-07-10 05:33:17,652 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=76.3 pTM=0.608 ipTM=0.266 tol=1.14 2024-07-10 05:33:38,002 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.2 pTM=0.59 ipTM=0.215 tol=1.1 2024-07-10 05:33:58,334 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75.9 pTM=0.602 ipTM=0.262 tol=0.981 2024-07-10 05:34:18,672 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.8 pTM=0.593 ipTM=0.241 tol=0.827 2024-07-10 05:34:39,003 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.8 pTM=0.605 ipTM=0.279 tol=1.16 2024-07-10 05:34:59,333 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.5 pTM=0.588 ipTM=0.231 tol=1 2024-07-10 05:35:19,654 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.5 pTM=0.614 ipTM=0.294 tol=1.4 2024-07-10 05:35:39,958 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=75.2 pTM=0.592 ipTM=0.236 tol=1.14 2024-07-10 05:36:00,279 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=75.7 pTM=0.607 ipTM=0.268 tol=0.697 2024-07-10 05:36:20,595 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=75.7 pTM=0.598 ipTM=0.252 tol=1.18 2024-07-10 05:36:40,923 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=75.8 pTM=0.603 ipTM=0.268 tol=0.635 2024-07-10 05:37:01,257 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=75.2 pTM=0.587 ipTM=0.242 tol=1.1 2024-07-10 05:37:21,592 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=75.8 pTM=0.593 ipTM=0.255 tol=1.25 2024-07-10 05:37:41,923 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=75.6 pTM=0.588 ipTM=0.244 tol=1.08 2024-07-10 05:38:02,258 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=75.5 pTM=0.588 ipTM=0.257 tol=0.715 2024-07-10 05:38:22,593 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=75.4 pTM=0.589 ipTM=0.251 tol=0.766 2024-07-10 05:38:42,928 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=75.4 pTM=0.587 ipTM=0.251 tol=1.22 2024-07-10 05:39:03,254 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=75.4 pTM=0.588 ipTM=0.245 tol=1.05 2024-07-10 05:39:23,590 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=75.6 pTM=0.594 ipTM=0.255 tol=0.585 2024-07-10 05:39:43,915 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=75.3 pTM=0.584 ipTM=0.242 tol=0.498 2024-07-10 05:39:43,916 alphafold2_multimer_v3_model_3_seed_000 took 488.0s (23 recycles) 2024-07-10 05:40:04,838 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.9 pTM=0.617 ipTM=0.167 2024-07-10 05:40:25,207 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=75.9 pTM=0.601 ipTM=0.162 tol=5.88 2024-07-10 05:40:45,569 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=74.8 pTM=0.589 ipTM=0.165 tol=6.82 2024-07-10 05:41:05,904 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=74.9 pTM=0.585 ipTM=0.415 tol=5.79 2024-07-10 05:41:26,247 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=74.6 pTM=0.585 ipTM=0.188 tol=2.02 2024-07-10 05:41:46,576 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=74.1 pTM=0.588 ipTM=0.183 tol=1.52 2024-07-10 05:42:06,906 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=74.1 pTM=0.584 ipTM=0.188 tol=0.856 2024-07-10 05:42:27,235 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=74.1 pTM=0.581 ipTM=0.176 tol=1.16 2024-07-10 05:42:47,559 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.8 pTM=0.576 ipTM=0.18 tol=0.883 2024-07-10 05:43:07,898 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=73.8 pTM=0.576 ipTM=0.171 tol=1.42 2024-07-10 05:43:28,237 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.7 pTM=0.577 ipTM=0.182 tol=1.14 2024-07-10 05:43:48,585 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.6 pTM=0.568 ipTM=0.167 tol=2.14 2024-07-10 05:44:08,946 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74 pTM=0.571 ipTM=0.168 tol=2.24 2024-07-10 05:44:29,286 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73.4 pTM=0.572 ipTM=0.173 tol=2.67 2024-07-10 05:44:49,625 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73.6 pTM=0.569 ipTM=0.168 tol=1.14 2024-07-10 05:45:09,949 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73 pTM=0.567 ipTM=0.17 tol=0.974 2024-07-10 05:45:30,285 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=73.4 pTM=0.567 ipTM=0.169 tol=1.07 2024-07-10 05:45:50,603 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.2 pTM=0.567 ipTM=0.172 tol=1.21 2024-07-10 05:46:10,942 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73.3 pTM=0.569 ipTM=0.177 tol=1.31 2024-07-10 05:46:31,278 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73.1 pTM=0.572 ipTM=0.176 tol=0.848 2024-07-10 05:46:51,621 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=73.5 pTM=0.575 ipTM=0.188 tol=0.869 2024-07-10 05:47:11,960 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.4 pTM=0.573 ipTM=0.178 tol=0.963 2024-07-10 05:47:32,295 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=73.3 pTM=0.571 ipTM=0.177 tol=1.34 2024-07-10 05:47:52,627 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=73.2 pTM=0.575 ipTM=0.19 tol=1.09 2024-07-10 05:48:12,959 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=73.2 pTM=0.568 ipTM=0.174 tol=1.18 2024-07-10 05:48:33,289 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.9 pTM=0.573 ipTM=0.175 tol=1.33 2024-07-10 05:48:53,622 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=73.2 pTM=0.566 ipTM=0.165 tol=1.84 2024-07-10 05:49:13,958 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=73.4 pTM=0.575 ipTM=0.167 tol=1.41 2024-07-10 05:49:34,289 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=73 pTM=0.571 ipTM=0.172 tol=0.554 2024-07-10 05:49:54,620 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=73.1 pTM=0.579 ipTM=0.176 tol=1.06 2024-07-10 05:50:14,945 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=73.1 pTM=0.569 ipTM=0.172 tol=1.02 2024-07-10 05:50:14,946 alphafold2_multimer_v3_model_4_seed_000 took 630.5s (30 recycles) 2024-07-10 05:50:35,896 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.6 pTM=0.598 ipTM=0.168 2024-07-10 05:50:56,256 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=74.1 pTM=0.657 ipTM=0.536 tol=5.43 2024-07-10 05:51:16,626 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.7 pTM=0.575 ipTM=0.179 tol=13.2 2024-07-10 05:51:36,996 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=76.1 pTM=0.572 ipTM=0.177 tol=1.48 2024-07-10 05:51:57,360 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=76.1 pTM=0.577 ipTM=0.185 tol=1.32 2024-07-10 05:52:17,741 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=76.8 pTM=0.591 ipTM=0.193 tol=1.85 2024-07-10 05:52:38,115 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=76.9 pTM=0.587 ipTM=0.191 tol=1.05 2024-07-10 05:52:58,493 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=76.6 pTM=0.575 ipTM=0.169 tol=1.49 2024-07-10 05:53:18,880 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=76.9 pTM=0.583 ipTM=0.181 tol=2.06 2024-07-10 05:53:39,256 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76.8 pTM=0.579 ipTM=0.173 tol=1.24 2024-07-10 05:53:59,618 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.4 pTM=0.577 ipTM=0.18 tol=1.68 2024-07-10 05:54:19,968 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=76.6 pTM=0.578 ipTM=0.19 tol=1.71 2024-07-10 05:54:40,320 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=76.8 pTM=0.582 ipTM=0.194 tol=1.24 2024-07-10 05:55:00,677 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.7 pTM=0.575 ipTM=0.188 tol=1.07 2024-07-10 05:55:21,040 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.9 pTM=0.584 ipTM=0.209 tol=1.35 2024-07-10 05:55:41,397 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.6 pTM=0.57 ipTM=0.182 tol=1.36 2024-07-10 05:56:01,775 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.7 pTM=0.574 ipTM=0.19 tol=1.32 2024-07-10 05:56:22,150 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.4 pTM=0.565 ipTM=0.175 tol=0.967 2024-07-10 05:56:42,534 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.6 pTM=0.576 ipTM=0.195 tol=1.69 2024-07-10 05:57:02,923 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.5 pTM=0.564 ipTM=0.168 tol=1.17 2024-07-10 05:57:23,306 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=76.8 pTM=0.572 ipTM=0.184 tol=1.38 2024-07-10 05:57:43,688 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.4 pTM=0.563 ipTM=0.169 tol=1.23 2024-07-10 05:58:04,080 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76.6 pTM=0.574 ipTM=0.189 tol=0.924 2024-07-10 05:58:24,468 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=76.6 pTM=0.565 ipTM=0.174 tol=0.819 2024-07-10 05:58:44,850 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76.5 pTM=0.572 ipTM=0.204 tol=1.09 2024-07-10 05:59:05,218 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.4 pTM=0.568 ipTM=0.178 tol=1.45 2024-07-10 05:59:25,584 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=76.7 pTM=0.577 ipTM=0.188 tol=1.2 2024-07-10 05:59:45,950 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.3 pTM=0.57 ipTM=0.172 tol=0.953 2024-07-10 06:00:06,313 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.9 pTM=0.581 ipTM=0.185 tol=1.36 2024-07-10 06:00:26,680 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.3 pTM=0.564 ipTM=0.167 tol=1.52 2024-07-10 06:00:47,040 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.4 pTM=0.574 ipTM=0.185 tol=1.8 2024-07-10 06:00:47,041 alphafold2_multimer_v3_model_5_seed_000 took 631.5s (30 recycles) 2024-07-10 06:00:47,598 reranking models by 'multimer' metric 2024-07-10 06:00:51,136 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 06:01:24,180 Relaxation took 36.6s 2024-07-10 06:01:24,180 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=75.3 pTM=0.584 ipTM=0.242 2024-07-10 06:02:04,893 Relaxation took 40.7s 2024-07-10 06:02:04,893 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.2 pTM=0.545 ipTM=0.213 2024-07-10 06:03:11,450 Relaxation took 66.6s 2024-07-10 06:03:11,451 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.4 pTM=0.574 ipTM=0.185 2024-07-10 06:03:44,383 Relaxation took 32.9s 2024-07-10 06:03:44,383 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=73.1 pTM=0.569 ipTM=0.172 2024-07-10 06:04:27,357 Relaxation took 43.0s 2024-07-10 06:04:27,357 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.4 pTM=0.548 ipTM=0.153 2024-07-10 06:04:29,078 Done