2024-07-10 05:19:36,565 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 05:19:36,886 Running on GPU
2024-07-10 05:19:41,087 Found 6 citations for tools or databases
2024-07-10 05:19:41,088 Query 1/1: FGF11_LIMS1 (length 550)
2024-07-10 05:19:41,549 Sleeping for 5s. Reason: PENDING
2024-07-10 05:19:46,966 Sleeping for 9s. Reason: RUNNING
2024-07-10 05:19:56,728 Sleeping for 9s. Reason: RUNNING
2024-07-10 05:20:06,144 Sleeping for 6s. Reason: RUNNING
2024-07-10 05:20:12,569 Sleeping for 5s. Reason: RUNNING
2024-07-10 05:20:17,984 Sleeping for 5s. Reason: RUNNING
2024-07-10 05:20:23,394 Sleeping for 6s. Reason: RUNNING
2024-07-10 05:20:29,827 Sleeping for 5s. Reason: RUNNING
2024-07-10 05:20:35,249 Sleeping for 8s. Reason: RUNNING
2024-07-10 05:20:43,673 Sleeping for 7s. Reason: RUNNING
2024-07-10 05:20:58,531 Sleeping for 8s. Reason: PENDING
2024-07-10 05:21:07,450 Sleeping for 5s. Reason: RUNNING
2024-07-10 05:21:12,871 Sleeping for 8s. Reason: RUNNING
2024-07-10 05:21:21,747 Sleeping for 7s. Reason: RUNNING
2024-07-10 05:21:29,153 Sleeping for 10s. Reason: RUNNING
2024-07-10 05:21:41,749 Setting max_seq=508, max_extra_seq=2048
2024-07-10 05:24:21,600 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65 pTM=0.375 ipTM=0.196
2024-07-10 05:24:28,132 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.6 pTM=0.373 ipTM=0.17 tol=14.2
2024-07-10 05:24:34,660 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.7 pTM=0.383 ipTM=0.232 tol=5.3
2024-07-10 05:24:41,193 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.8 pTM=0.368 ipTM=0.159 tol=4.19
2024-07-10 05:24:47,731 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.8 pTM=0.373 ipTM=0.197 tol=2.46
2024-07-10 05:24:54,290 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.2 pTM=0.371 ipTM=0.205 tol=12.7
2024-07-10 05:25:00,848 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.6 pTM=0.369 ipTM=0.189 tol=4.23
2024-07-10 05:25:07,405 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.2 pTM=0.362 ipTM=0.152 tol=8.52
2024-07-10 05:25:13,950 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.7 pTM=0.375 ipTM=0.194 tol=5.74
2024-07-10 05:25:20,511 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.5 pTM=0.365 ipTM=0.165 tol=8.16
2024-07-10 05:25:27,070 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.6 pTM=0.373 ipTM=0.218 tol=6.35
2024-07-10 05:25:33,631 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.3 pTM=0.372 ipTM=0.175 tol=3.14
2024-07-10 05:25:40,191 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61 pTM=0.374 ipTM=0.2 tol=2.67
2024-07-10 05:25:46,755 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.2 pTM=0.371 ipTM=0.181 tol=3.45
2024-07-10 05:25:53,315 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.9 pTM=0.382 ipTM=0.261 tol=3.34
2024-07-10 05:25:59,882 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.9 pTM=0.366 ipTM=0.157 tol=2.78
2024-07-10 05:26:06,450 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.5 pTM=0.364 ipTM=0.172 tol=2.56
2024-07-10 05:26:13,017 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.7 pTM=0.365 ipTM=0.158 tol=4.61
2024-07-10 05:26:19,584 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.9 pTM=0.373 ipTM=0.192 tol=3.48
2024-07-10 05:26:26,156 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.2 pTM=0.365 ipTM=0.159 tol=2.02
2024-07-10 05:26:32,724 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.4 pTM=0.375 ipTM=0.208 tol=3.88
2024-07-10 05:26:39,300 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.4 pTM=0.375 ipTM=0.193 tol=4.09
2024-07-10 05:26:45,867 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.6 pTM=0.382 ipTM=0.252 tol=5.43
2024-07-10 05:26:52,446 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.5 pTM=0.373 ipTM=0.178 tol=4.9
2024-07-10 05:26:59,021 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.7 pTM=0.37 ipTM=0.202 tol=3.77
2024-07-10 05:27:05,599 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.3 pTM=0.366 ipTM=0.157 tol=4.12
2024-07-10 05:27:12,168 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.5 pTM=0.371 ipTM=0.178 tol=3.93
2024-07-10 05:27:18,745 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.2 pTM=0.366 ipTM=0.156 tol=4.52
2024-07-10 05:27:25,315 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.3 pTM=0.372 ipTM=0.177 tol=4.02
2024-07-10 05:27:31,891 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.2 pTM=0.37 ipTM=0.165 tol=5.42
2024-07-10 05:27:38,467 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.4 pTM=0.372 ipTM=0.204 tol=5.58
2024-07-10 05:27:38,468 alphafold2_multimer_v3_model_1_seed_000 took 351.1s (30 recycles)
2024-07-10 05:27:45,244 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.3 pTM=0.355 ipTM=0.163
2024-07-10 05:27:51,840 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.2 pTM=0.401 ipTM=0.373 tol=13.2
2024-07-10 05:27:58,431 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.5 pTM=0.363 ipTM=0.163 tol=12.4
2024-07-10 05:28:05,022 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.6 pTM=0.374 ipTM=0.271 tol=18.5
2024-07-10 05:28:11,629 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.6 pTM=0.392 ipTM=0.344 tol=11.7
2024-07-10 05:28:18,221 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.8 pTM=0.376 ipTM=0.267 tol=8.61
2024-07-10 05:28:24,808 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.4 pTM=0.373 ipTM=0.243 tol=2.72
2024-07-10 05:28:31,402 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.8 pTM=0.375 ipTM=0.247 tol=3.82
2024-07-10 05:28:37,986 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.9 pTM=0.367 ipTM=0.227 tol=5.59
2024-07-10 05:28:44,560 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.1 pTM=0.37 ipTM=0.214 tol=5.27
2024-07-10 05:28:51,164 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.1 pTM=0.358 ipTM=0.17 tol=15.4
2024-07-10 05:28:57,758 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.8 pTM=0.395 ipTM=0.353 tol=3.55
2024-07-10 05:29:04,359 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.5 pTM=0.378 ipTM=0.272 tol=6.27
2024-07-10 05:29:10,959 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66 pTM=0.365 ipTM=0.213 tol=3.72
2024-07-10 05:29:17,564 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.6 pTM=0.366 ipTM=0.222 tol=2.78
2024-07-10 05:29:24,155 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.4 pTM=0.37 ipTM=0.233 tol=3.06
2024-07-10 05:29:30,751 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.5 pTM=0.365 ipTM=0.22 tol=3.04
2024-07-10 05:29:37,343 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.8 pTM=0.369 ipTM=0.236 tol=5.06
2024-07-10 05:29:43,944 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.9 pTM=0.355 ipTM=0.175 tol=2.69
2024-07-10 05:29:50,533 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.1 pTM=0.381 ipTM=0.299 tol=3.97
2024-07-10 05:29:57,132 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.6 pTM=0.373 ipTM=0.247 tol=3.14
2024-07-10 05:30:03,724 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.5 pTM=0.372 ipTM=0.239 tol=2.74
2024-07-10 05:30:10,318 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.7 pTM=0.363 ipTM=0.185 tol=4.91
2024-07-10 05:30:16,911 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.2 pTM=0.379 ipTM=0.272 tol=3.26
2024-07-10 05:30:23,507 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.3 pTM=0.375 ipTM=0.253 tol=3.04
2024-07-10 05:30:30,106 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.3 pTM=0.369 ipTM=0.234 tol=3.01
2024-07-10 05:30:36,703 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.2 pTM=0.365 ipTM=0.216 tol=3.25
2024-07-10 05:30:43,298 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.5 pTM=0.376 ipTM=0.263 tol=3.47
2024-07-10 05:30:49,900 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.2 pTM=0.373 ipTM=0.241 tol=2.57
2024-07-10 05:30:56,495 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.2 pTM=0.376 ipTM=0.252 tol=6.53
2024-07-10 05:31:03,090 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.9 pTM=0.364 ipTM=0.178 tol=3.48
2024-07-10 05:31:03,091 alphafold2_multimer_v3_model_2_seed_000 took 204.4s (30 recycles)
2024-07-10 05:31:09,909 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.9 pTM=0.355 ipTM=0.139
2024-07-10 05:31:16,510 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.2 pTM=0.361 ipTM=0.159 tol=10
2024-07-10 05:31:23,110 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62 pTM=0.355 ipTM=0.135 tol=10.5
2024-07-10 05:31:29,699 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.3 pTM=0.36 ipTM=0.141 tol=12.5
2024-07-10 05:31:36,292 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.6 pTM=0.355 ipTM=0.132 tol=6.55
2024-07-10 05:31:42,883 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.7 pTM=0.357 ipTM=0.134 tol=5.77
2024-07-10 05:31:49,479 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.8 pTM=0.357 ipTM=0.138 tol=11
2024-07-10 05:31:56,075 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.2 pTM=0.358 ipTM=0.138 tol=10.8
2024-07-10 05:32:02,661 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.6 pTM=0.357 ipTM=0.132 tol=8.45
2024-07-10 05:32:09,249 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.4 pTM=0.358 ipTM=0.13 tol=5.57
2024-07-10 05:32:15,838 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.8 pTM=0.366 ipTM=0.173 tol=6.59
2024-07-10 05:32:22,423 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.7 pTM=0.362 ipTM=0.135 tol=6.07
2024-07-10 05:32:29,006 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.1 pTM=0.365 ipTM=0.14 tol=5.01
2024-07-10 05:32:35,596 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.2 pTM=0.361 ipTM=0.133 tol=4.75
2024-07-10 05:32:42,177 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.6 pTM=0.365 ipTM=0.14 tol=4.73
2024-07-10 05:32:48,767 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.2 pTM=0.364 ipTM=0.137 tol=10.3
2024-07-10 05:32:55,357 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.2 pTM=0.358 ipTM=0.129 tol=5.49
2024-07-10 05:33:01,956 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.3 pTM=0.379 ipTM=0.244 tol=8.38
2024-07-10 05:33:08,554 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63 pTM=0.367 ipTM=0.165 tol=3.43
2024-07-10 05:33:15,139 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.8 pTM=0.368 ipTM=0.144 tol=11.4
2024-07-10 05:33:21,730 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64 pTM=0.387 ipTM=0.34 tol=9.86
2024-07-10 05:33:28,319 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.2 pTM=0.368 ipTM=0.169 tol=5.14
2024-07-10 05:33:34,910 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.6 pTM=0.363 ipTM=0.14 tol=9.6
2024-07-10 05:33:41,498 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.8 pTM=0.366 ipTM=0.142 tol=6.01
2024-07-10 05:33:48,082 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.1 pTM=0.365 ipTM=0.139 tol=4.3
2024-07-10 05:33:54,674 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.5 pTM=0.362 ipTM=0.135 tol=6.83
2024-07-10 05:34:01,258 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.8 pTM=0.36 ipTM=0.131 tol=7.14
2024-07-10 05:34:07,848 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.8 pTM=0.363 ipTM=0.139 tol=5.55
2024-07-10 05:34:14,431 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.4 pTM=0.358 ipTM=0.132 tol=4.25
2024-07-10 05:34:21,015 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.3 pTM=0.369 ipTM=0.177 tol=3.82
2024-07-10 05:34:27,596 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.1 pTM=0.361 ipTM=0.137 tol=3.05
2024-07-10 05:34:27,597 alphafold2_multimer_v3_model_3_seed_000 took 204.3s (30 recycles)
2024-07-10 05:34:34,398 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.9 pTM=0.358 ipTM=0.146
2024-07-10 05:34:40,995 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.8 pTM=0.413 ipTM=0.439 tol=21.9
2024-07-10 05:34:47,607 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.8 pTM=0.441 ipTM=0.558 tol=25.1
2024-07-10 05:34:54,208 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.8 pTM=0.425 ipTM=0.474 tol=8.2
2024-07-10 05:35:00,805 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.8 pTM=0.429 ipTM=0.49 tol=6.97
2024-07-10 05:35:07,428 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.2 pTM=0.409 ipTM=0.419 tol=17.7
2024-07-10 05:35:14,037 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.8 pTM=0.387 ipTM=0.326 tol=16.6
2024-07-10 05:35:20,643 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.6 pTM=0.366 ipTM=0.225 tol=9.36
2024-07-10 05:35:27,236 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.4 pTM=0.367 ipTM=0.215 tol=7.65
2024-07-10 05:35:33,837 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.8 pTM=0.358 ipTM=0.159 tol=11.2
2024-07-10 05:35:40,429 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.1 pTM=0.361 ipTM=0.156 tol=8.02
2024-07-10 05:35:47,021 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.5 pTM=0.361 ipTM=0.17 tol=4.89
2024-07-10 05:35:53,613 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63 pTM=0.359 ipTM=0.149 tol=2.56
2024-07-10 05:36:00,203 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.4 pTM=0.368 ipTM=0.23 tol=5.41
2024-07-10 05:36:06,793 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.5 pTM=0.359 ipTM=0.177 tol=2.81
2024-07-10 05:36:13,379 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.9 pTM=0.364 ipTM=0.167 tol=3.73
2024-07-10 05:36:19,974 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.9 pTM=0.357 ipTM=0.168 tol=6.88
2024-07-10 05:36:26,568 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.9 pTM=0.362 ipTM=0.168 tol=5.62
2024-07-10 05:36:33,161 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.6 pTM=0.358 ipTM=0.171 tol=5.64
2024-07-10 05:36:39,746 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.5 pTM=0.358 ipTM=0.142 tol=7.81
2024-07-10 05:36:46,327 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.7 pTM=0.373 ipTM=0.248 tol=7.98
2024-07-10 05:36:52,941 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.4 pTM=0.407 ipTM=0.454 tol=15.8
2024-07-10 05:36:59,526 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.1 pTM=0.391 ipTM=0.37 tol=8.68
2024-07-10 05:37:06,128 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.8 pTM=0.366 ipTM=0.22 tol=17.1
2024-07-10 05:37:12,720 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.5 pTM=0.386 ipTM=0.316 tol=7.82
2024-07-10 05:37:19,323 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.4 pTM=0.377 ipTM=0.291 tol=5.18
2024-07-10 05:37:25,915 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.4 pTM=0.365 ipTM=0.202 tol=6.62
2024-07-10 05:37:32,511 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.4 pTM=0.361 ipTM=0.179 tol=2.64
2024-07-10 05:37:39,101 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.3 pTM=0.362 ipTM=0.192 tol=3.4
2024-07-10 05:37:45,696 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.5 pTM=0.359 ipTM=0.171 tol=2.74
2024-07-10 05:37:52,293 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.4 pTM=0.366 ipTM=0.23 tol=3.29
2024-07-10 05:37:52,293 alphafold2_multimer_v3_model_4_seed_000 took 204.5s (30 recycles)
2024-07-10 05:37:59,118 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.2 pTM=0.364 ipTM=0.222
2024-07-10 05:38:05,756 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.1 pTM=0.37 ipTM=0.279 tol=13.1
2024-07-10 05:38:12,368 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.1 pTM=0.361 ipTM=0.173 tol=22.5
2024-07-10 05:38:18,977 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.9 pTM=0.36 ipTM=0.175 tol=18.8
2024-07-10 05:38:25,602 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.9 pTM=0.362 ipTM=0.239 tol=12.7
2024-07-10 05:38:32,222 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.1 pTM=0.355 ipTM=0.15 tol=9.19
2024-07-10 05:38:38,848 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.9 pTM=0.359 ipTM=0.186 tol=8.25
2024-07-10 05:38:45,478 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.4 pTM=0.361 ipTM=0.236 tol=14.9
2024-07-10 05:38:52,088 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.2 pTM=0.358 ipTM=0.183 tol=13.9
2024-07-10 05:38:58,699 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.5 pTM=0.358 ipTM=0.18 tol=8.93
2024-07-10 05:39:05,308 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.2 pTM=0.355 ipTM=0.183 tol=6.48
2024-07-10 05:39:11,921 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.8 pTM=0.35 ipTM=0.164 tol=5.52
2024-07-10 05:39:18,521 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.7 pTM=0.35 ipTM=0.151 tol=6.8
2024-07-10 05:39:25,136 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.8 pTM=0.348 ipTM=0.152 tol=6.15
2024-07-10 05:39:31,743 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.4 pTM=0.356 ipTM=0.194 tol=4.65
2024-07-10 05:39:38,356 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.2 pTM=0.346 ipTM=0.138 tol=4.51
2024-07-10 05:39:44,964 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.1 pTM=0.351 ipTM=0.148 tol=8.27
2024-07-10 05:39:51,589 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66 pTM=0.351 ipTM=0.177 tol=9.39
2024-07-10 05:39:58,201 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.7 pTM=0.35 ipTM=0.149 tol=7.08
2024-07-10 05:40:04,812 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.4 pTM=0.349 ipTM=0.133 tol=6.26
2024-07-10 05:40:11,425 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.9 pTM=0.346 ipTM=0.126 tol=4.41
2024-07-10 05:40:18,034 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.4 pTM=0.347 ipTM=0.128 tol=4.68
2024-07-10 05:40:24,648 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.1 pTM=0.349 ipTM=0.138 tol=3.82
2024-07-10 05:40:31,259 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.9 pTM=0.345 ipTM=0.125 tol=3.46
2024-07-10 05:40:37,864 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.1 pTM=0.344 ipTM=0.119 tol=2.77
2024-07-10 05:40:44,482 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.1 pTM=0.364 ipTM=0.242 tol=17.7
2024-07-10 05:40:51,098 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.1 pTM=0.347 ipTM=0.167 tol=14
2024-07-10 05:40:57,711 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.1 pTM=0.347 ipTM=0.126 tol=11.3
2024-07-10 05:41:04,318 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.5 pTM=0.346 ipTM=0.121 tol=5.63
2024-07-10 05:41:10,929 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.5 pTM=0.36 ipTM=0.181 tol=7.16
2024-07-10 05:41:17,538 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.2 pTM=0.357 ipTM=0.207 tol=5.3
2024-07-10 05:41:17,539 alphafold2_multimer_v3_model_5_seed_000 took 205.0s (30 recycles)
2024-07-10 05:41:17,742 reranking models by 'multimer' metric
2024-07-10 05:41:18,508 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 05:42:11,902 Relaxation took 54.2s
2024-07-10 05:42:11,902 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.4 pTM=0.366 ipTM=0.23
2024-07-10 05:43:00,396 Relaxation took 48.5s
2024-07-10 05:43:00,396 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.4 pTM=0.372 ipTM=0.204
2024-07-10 05:43:39,142 Relaxation took 38.7s
2024-07-10 05:43:39,143 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.2 pTM=0.357 ipTM=0.207
2024-07-10 05:43:56,502 Relaxation took 17.4s
2024-07-10 05:43:56,502 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.9 pTM=0.364 ipTM=0.178
2024-07-10 05:44:43,337 Relaxation took 46.8s
2024-07-10 05:44:43,337 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.1 pTM=0.361 ipTM=0.137
2024-07-10 05:44:44,451 Done