2024-07-10 06:19:39,106 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 06:19:39,417 Running on GPU 2024-07-10 06:19:43,293 Found 6 citations for tools or databases 2024-07-10 06:19:43,293 Query 1/1: FOXB2_ZN609 (length 1843) 2024-07-10 06:19:43,752 Sleeping for 6s. Reason: PENDING 2024-07-10 06:19:50,179 Sleeping for 8s. Reason: RUNNING 2024-07-10 06:19:58,738 Sleeping for 5s. Reason: RUNNING 2024-07-10 06:20:04,156 Sleeping for 10s. Reason: RUNNING 2024-07-10 06:20:14,944 Sleeping for 5s. Reason: RUNNING 2024-07-10 06:20:21,158 Sleeping for 8s. Reason: RUNNING 2024-07-10 06:20:29,601 Sleeping for 5s. Reason: RUNNING 2024-07-10 06:20:35,012 Sleeping for 8s. Reason: RUNNING 2024-07-10 06:20:49,803 Sleeping for 10s. Reason: PENDING 2024-07-10 06:21:00,755 Sleeping for 6s. Reason: RUNNING 2024-07-10 06:21:07,175 Sleeping for 9s. Reason: RUNNING 2024-07-10 06:21:16,608 Sleeping for 8s. Reason: RUNNING 2024-07-10 06:21:26,049 Sleeping for 10s. Reason: RUNNING 2024-07-10 06:21:36,493 Sleeping for 10s. Reason: RUNNING 2024-07-10 06:21:52,101 Setting max_seq=508, max_extra_seq=2048 2024-07-10 06:26:45,685 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=22.2 pTM=0.256 ipTM=0.209 2024-07-10 06:28:51,559 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=21.5 pTM=0.251 ipTM=0.217 tol=20.4 2024-07-10 06:30:57,500 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=21.6 pTM=0.25 ipTM=0.233 tol=22.4 2024-07-10 06:33:03,501 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=21.7 pTM=0.247 ipTM=0.221 tol=19.4 2024-07-10 06:35:09,505 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=21.9 pTM=0.247 ipTM=0.226 tol=9.8 2024-07-10 06:37:15,537 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=22 pTM=0.247 ipTM=0.226 tol=12.7 2024-07-10 06:39:21,560 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=22.1 pTM=0.245 ipTM=0.23 tol=9.63 2024-07-10 06:41:27,585 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=21.8 pTM=0.244 ipTM=0.225 tol=6.2 2024-07-10 06:43:33,718 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=22.2 pTM=0.245 ipTM=0.226 tol=6.04 2024-07-10 06:45:39,730 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=22.1 pTM=0.242 ipTM=0.225 tol=5.38 2024-07-10 06:47:45,807 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=22.4 pTM=0.244 ipTM=0.23 tol=4.63 2024-07-10 06:49:51,887 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=22.1 pTM=0.242 ipTM=0.229 tol=5.63 2024-07-10 06:51:57,966 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=22.3 pTM=0.241 ipTM=0.233 tol=5.71 2024-07-10 06:54:03,961 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=22.1 pTM=0.241 ipTM=0.228 tol=6.93 2024-07-10 06:56:09,891 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=22.5 pTM=0.243 ipTM=0.229 tol=5.3 2024-07-10 06:58:15,764 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=22.3 pTM=0.24 ipTM=0.225 tol=5.85 2024-07-10 07:00:21,648 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=22.3 pTM=0.241 ipTM=0.225 tol=6.1 2024-07-10 07:02:27,587 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=22 pTM=0.241 ipTM=0.225 tol=4.95 2024-07-10 07:04:33,658 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=22.5 pTM=0.241 ipTM=0.229 tol=5.75 2024-07-10 07:06:39,764 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=22.3 pTM=0.24 ipTM=0.224 tol=7.2 2024-07-10 07:08:45,929 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=22.5 pTM=0.242 ipTM=0.226 tol=5.55 2024-07-10 07:10:52,001 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=22.3 pTM=0.24 ipTM=0.224 tol=5.95 2024-07-10 07:12:58,205 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=22.5 pTM=0.241 ipTM=0.228 tol=11.6 2024-07-10 07:15:04,276 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=22.2 pTM=0.238 ipTM=0.223 tol=12 2024-07-10 07:17:10,354 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=22.6 pTM=0.24 ipTM=0.227 tol=6.12 2024-07-10 07:19:16,347 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=22.4 pTM=0.238 ipTM=0.223 tol=5.64 2024-07-10 07:21:22,332 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=22.4 pTM=0.239 ipTM=0.226 tol=12 2024-07-10 07:23:28,258 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=22.2 pTM=0.238 ipTM=0.221 tol=13.9 2024-07-10 07:25:34,301 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=22.4 pTM=0.239 ipTM=0.224 tol=8.16 2024-07-10 07:27:40,372 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=22.3 pTM=0.237 ipTM=0.222 tol=11.7 2024-07-10 07:29:46,334 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=22.5 pTM=0.238 ipTM=0.229 tol=11.5 2024-07-10 07:29:46,336 alphafold2_multimer_v3_model_1_seed_000 took 4069.2s (30 recycles) 2024-07-10 07:31:54,210 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=22.9 pTM=0.248 ipTM=0.214 2024-07-10 07:34:00,309 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=23.1 pTM=0.24 ipTM=0.196 tol=25.8 2024-07-10 07:36:06,548 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=23.2 pTM=0.242 ipTM=0.194 tol=29.1 2024-07-10 07:38:12,814 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=23.2 pTM=0.238 ipTM=0.191 tol=20 2024-07-10 07:40:19,017 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=23.5 pTM=0.238 ipTM=0.198 tol=15 2024-07-10 07:42:25,259 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=23.5 pTM=0.239 ipTM=0.201 tol=13.4 2024-07-10 07:44:31,641 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=23.5 pTM=0.243 ipTM=0.206 tol=15 2024-07-10 07:46:38,098 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=23.8 pTM=0.243 ipTM=0.205 tol=11.4 2024-07-10 07:48:44,527 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=23.7 pTM=0.241 ipTM=0.206 tol=12.1 2024-07-10 07:50:50,884 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=23.9 pTM=0.241 ipTM=0.207 tol=11.8 2024-07-10 07:52:57,315 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=23.7 pTM=0.24 ipTM=0.208 tol=10.2 2024-07-10 07:55:03,763 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=23.8 pTM=0.24 ipTM=0.204 tol=9.95 2024-07-10 07:57:10,044 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=24 pTM=0.24 ipTM=0.206 tol=11.7 2024-07-10 07:59:16,381 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=24.1 pTM=0.24 ipTM=0.203 tol=17.7 2024-07-10 08:01:22,585 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=24.1 pTM=0.239 ipTM=0.201 tol=16.6 2024-07-10 08:03:28,814 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=24.2 pTM=0.24 ipTM=0.201 tol=10.2 2024-07-10 08:05:35,043 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=23.8 pTM=0.239 ipTM=0.202 tol=10.5 2024-07-10 08:07:41,277 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=23.9 pTM=0.24 ipTM=0.199 tol=10.6 2024-07-10 08:09:47,486 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=24.1 pTM=0.24 ipTM=0.199 tol=8.93 2024-07-10 08:11:53,821 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=24.1 pTM=0.241 ipTM=0.197 tol=9.81 2024-07-10 08:14:00,157 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=23.9 pTM=0.243 ipTM=0.2 tol=10.6 2024-07-10 08:16:06,497 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=23.9 pTM=0.241 ipTM=0.202 tol=11.5 2024-07-10 08:18:12,739 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=24.1 pTM=0.247 ipTM=0.203 tol=21.5 2024-07-10 08:20:19,057 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=23.9 pTM=0.239 ipTM=0.197 tol=15.9 2024-07-10 08:22:25,302 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=23.9 pTM=0.24 ipTM=0.201 tol=14.7 2024-07-10 08:24:31,611 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=24.2 pTM=0.24 ipTM=0.203 tol=14.6 2024-07-10 08:26:37,891 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=24.2 pTM=0.239 ipTM=0.202 tol=11.4 2024-07-10 08:28:44,197 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=24.1 pTM=0.24 ipTM=0.203 tol=10 2024-07-10 08:30:50,534 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=24 pTM=0.239 ipTM=0.202 tol=9.59 2024-07-10 08:32:56,816 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=24.1 pTM=0.239 ipTM=0.2 tol=8.67 2024-07-10 08:35:03,136 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=24.1 pTM=0.238 ipTM=0.199 tol=7.5 2024-07-10 08:35:03,138 alphafold2_multimer_v3_model_2_seed_000 took 3914.8s (30 recycles) 2024-07-10 08:37:11,899 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=22 pTM=0.235 ipTM=0.204 2024-07-10 08:39:19,001 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=21.9 pTM=0.229 ipTM=0.212 tol=29.3 2024-07-10 08:41:26,090 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=22.4 pTM=0.23 ipTM=0.209 tol=25.3 2024-07-10 08:43:33,289 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=22.4 pTM=0.229 ipTM=0.204 tol=20.1 2024-07-10 08:45:40,543 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=22.6 pTM=0.23 ipTM=0.201 tol=24.1 2024-07-10 08:47:47,802 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=22.6 pTM=0.23 ipTM=0.204 tol=20 2024-07-10 08:49:55,125 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=22.7 pTM=0.23 ipTM=0.204 tol=17.3 2024-07-10 08:52:02,562 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=22.6 pTM=0.231 ipTM=0.206 tol=17.7 2024-07-10 08:54:10,023 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=22.7 pTM=0.232 ipTM=0.205 tol=15.9 2024-07-10 08:56:17,388 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=22.9 pTM=0.231 ipTM=0.204 tol=17 2024-07-10 08:58:24,720 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=22.9 pTM=0.231 ipTM=0.204 tol=13.5 2024-07-10 09:00:32,144 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=22.9 pTM=0.231 ipTM=0.204 tol=11.7 2024-07-10 09:02:39,584 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=22.9 pTM=0.231 ipTM=0.204 tol=8.24 2024-07-10 09:04:47,003 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=22.9 pTM=0.231 ipTM=0.204 tol=8.29 2024-07-10 09:06:54,380 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=23 pTM=0.231 ipTM=0.203 tol=10 2024-07-10 09:09:01,703 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=23 pTM=0.231 ipTM=0.203 tol=6.8 2024-07-10 09:11:09,094 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=23 pTM=0.232 ipTM=0.201 tol=10.5 2024-07-10 09:13:16,485 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=22.9 pTM=0.23 ipTM=0.202 tol=10.4 2024-07-10 09:15:23,795 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=23.1 pTM=0.231 ipTM=0.204 tol=8.49 2024-07-10 09:17:31,146 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=23.2 pTM=0.231 ipTM=0.205 tol=11.6 2024-07-10 09:19:38,513 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=23.1 pTM=0.231 ipTM=0.203 tol=8.41 2024-07-10 09:21:45,839 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=23.3 pTM=0.232 ipTM=0.203 tol=11.3 2024-07-10 09:23:53,213 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=23.2 pTM=0.232 ipTM=0.204 tol=11.2 2024-07-10 09:26:00,659 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=23.2 pTM=0.232 ipTM=0.204 tol=10.5 2024-07-10 09:28:08,024 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=23.2 pTM=0.231 ipTM=0.205 tol=7.44 2024-07-10 09:30:15,379 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=23.3 pTM=0.233 ipTM=0.205 tol=8.96 2024-07-10 09:32:22,768 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=23.1 pTM=0.231 ipTM=0.205 tol=8.17 2024-07-10 09:34:30,335 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=23 pTM=0.231 ipTM=0.201 tol=7.86 2024-07-10 09:36:37,777 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=23.2 pTM=0.231 ipTM=0.206 tol=10.2 2024-07-10 09:38:45,222 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=23 pTM=0.231 ipTM=0.205 tol=9.06 2024-07-10 09:40:52,652 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=23.1 pTM=0.23 ipTM=0.208 tol=6.24 2024-07-10 09:40:52,654 alphafold2_multimer_v3_model_3_seed_000 took 3947.5s (30 recycles) 2024-07-10 09:43:01,204 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=21.4 pTM=0.238 ipTM=0.212 2024-07-10 09:45:08,374 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=21.5 pTM=0.232 ipTM=0.212 tol=28.9 2024-07-10 09:47:15,438 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=22 pTM=0.236 ipTM=0.217 tol=21.5 2024-07-10 09:49:22,671 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=22.5 pTM=0.244 ipTM=0.239 tol=21.1 2024-07-10 09:51:29,868 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=22.3 pTM=0.242 ipTM=0.233 tol=17.7 2024-07-10 09:53:37,063 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=22.7 pTM=0.243 ipTM=0.225 tol=15 2024-07-10 09:55:44,240 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=22.5 pTM=0.242 ipTM=0.232 tol=15.5 2024-07-10 09:57:51,440 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=22.5 pTM=0.24 ipTM=0.211 tol=19.4 2024-07-10 09:59:58,707 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=23.1 pTM=0.24 ipTM=0.212 tol=20.4 2024-07-10 10:02:05,856 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=23 pTM=0.239 ipTM=0.21 tol=12.5 2024-07-10 10:04:13,059 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=23 pTM=0.24 ipTM=0.204 tol=12 2024-07-10 10:06:20,372 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=23 pTM=0.239 ipTM=0.2 tol=13.6 2024-07-10 10:08:27,633 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=22.7 pTM=0.239 ipTM=0.205 tol=16.7 2024-07-10 10:10:34,859 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=22.9 pTM=0.24 ipTM=0.207 tol=18.2 2024-07-10 10:12:42,014 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=23 pTM=0.24 ipTM=0.206 tol=22.4 2024-07-10 10:14:49,172 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=22.6 pTM=0.239 ipTM=0.21 tol=18.8 2024-07-10 10:16:56,403 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=23.2 pTM=0.244 ipTM=0.265 tol=16.5 2024-07-10 10:19:03,758 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=23.1 pTM=0.244 ipTM=0.234 tol=16.2 2024-07-10 10:21:11,001 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=22.5 pTM=0.242 ipTM=0.23 tol=12.8 2024-07-10 10:23:18,235 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=23.1 pTM=0.245 ipTM=0.268 tol=12.5 2024-07-10 10:25:25,443 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=22.8 pTM=0.243 ipTM=0.25 tol=14 2024-07-10 10:27:32,606 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=22.8 pTM=0.243 ipTM=0.226 tol=12.1 2024-07-10 10:29:39,852 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=22.8 pTM=0.242 ipTM=0.223 tol=14.7 2024-07-10 10:31:47,052 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=23 pTM=0.243 ipTM=0.239 tol=12.1 2024-07-10 10:33:54,304 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=22.7 pTM=0.24 ipTM=0.234 tol=13.5 2024-07-10 10:36:01,568 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=22.8 pTM=0.24 ipTM=0.223 tol=12.6 2024-07-10 10:38:08,914 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=22.8 pTM=0.243 ipTM=0.235 tol=14.9 2024-07-10 10:40:16,208 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=23 pTM=0.244 ipTM=0.232 tol=13.7 2024-07-10 10:42:23,496 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=22.8 pTM=0.241 ipTM=0.227 tol=11.6 2024-07-10 10:44:30,770 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=22.9 pTM=0.243 ipTM=0.22 tol=10.2 2024-07-10 10:46:37,961 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=22.8 pTM=0.24 ipTM=0.22 tol=13.7 2024-07-10 10:46:37,963 alphafold2_multimer_v3_model_4_seed_000 took 3943.3s (30 recycles) 2024-07-10 10:48:47,203 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=22.6 pTM=0.235 ipTM=0.226 2024-07-10 10:50:54,714 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=22.1 pTM=0.23 ipTM=0.248 tol=22.3 2024-07-10 10:53:02,376 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=23 pTM=0.228 ipTM=0.211 tol=17.2 2024-07-10 10:55:10,134 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=23.5 pTM=0.227 ipTM=0.223 tol=25.2 2024-07-10 10:57:18,002 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=23.2 pTM=0.223 ipTM=0.204 tol=21.2 2024-07-10 10:59:26,006 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=23.6 pTM=0.226 ipTM=0.217 tol=17 2024-07-10 11:01:33,823 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=23.4 pTM=0.224 ipTM=0.215 tol=13.7 2024-07-10 11:03:41,707 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=23.5 pTM=0.224 ipTM=0.223 tol=21.8 2024-07-10 11:05:49,606 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=23.5 pTM=0.226 ipTM=0.242 tol=19.3 2024-07-10 11:07:57,487 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=23.9 pTM=0.233 ipTM=0.325 tol=20.5 2024-07-10 11:10:05,345 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=23.8 pTM=0.226 ipTM=0.243 tol=12.8 2024-07-10 11:12:13,263 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=23.9 pTM=0.228 ipTM=0.268 tol=12.6 2024-07-10 11:14:21,068 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=23.6 pTM=0.227 ipTM=0.264 tol=9.68 2024-07-10 11:16:28,979 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=24.2 pTM=0.236 ipTM=0.355 tol=12.1 2024-07-10 11:18:36,920 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=23.7 pTM=0.228 ipTM=0.272 tol=22 2024-07-10 11:20:44,902 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=24 pTM=0.231 ipTM=0.306 tol=22.3 2024-07-10 11:22:52,809 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=23.7 pTM=0.229 ipTM=0.289 tol=15.7 2024-07-10 11:25:00,574 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=23.7 pTM=0.228 ipTM=0.269 tol=14.8 2024-07-10 11:27:08,419 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=23.9 pTM=0.231 ipTM=0.311 tol=22 2024-07-10 11:29:16,212 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=23.6 pTM=0.225 ipTM=0.252 tol=19.4 2024-07-10 11:31:24,183 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=23.8 pTM=0.23 ipTM=0.305 tol=25.7 2024-07-10 11:33:32,146 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=23.6 pTM=0.225 ipTM=0.251 tol=14.1 2024-07-10 11:35:39,990 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=24 pTM=0.232 ipTM=0.331 tol=11.1 2024-07-10 11:37:47,806 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=23.4 pTM=0.225 ipTM=0.242 tol=12 2024-07-10 11:39:55,615 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=23.9 pTM=0.23 ipTM=0.314 tol=13.9 2024-07-10 11:42:03,425 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=23.5 pTM=0.225 ipTM=0.246 tol=13.5 2024-07-10 11:44:11,339 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=23.9 pTM=0.23 ipTM=0.306 tol=15 2024-07-10 11:46:19,212 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=23.5 pTM=0.225 ipTM=0.245 tol=11.9 2024-07-10 11:48:27,025 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=24 pTM=0.23 ipTM=0.301 tol=16.2 2024-07-10 11:50:34,767 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=23.6 pTM=0.227 ipTM=0.252 tol=12.5 2024-07-10 11:52:42,602 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=23.8 pTM=0.228 ipTM=0.273 tol=22.8 2024-07-10 11:52:42,603 alphafold2_multimer_v3_model_5_seed_000 took 3962.7s (30 recycles) 2024-07-10 11:52:44,571 reranking models by 'multimer' metric 2024-07-10 11:52:48,507 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 11:58:33,836 Relaxation took 349.3s 2024-07-10 11:58:33,836 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=23.8 pTM=0.228 ipTM=0.273 2024-07-10 12:08:30,235 Relaxation took 596.4s 2024-07-10 12:08:30,235 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=22.5 pTM=0.238 ipTM=0.229 2024-07-10 12:13:39,611 Relaxation took 309.4s 2024-07-10 12:13:39,611 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=22.8 pTM=0.24 ipTM=0.22 2024-07-10 12:19:00,196 Relaxation took 320.6s 2024-07-10 12:19:00,196 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=23.1 pTM=0.23 ipTM=0.208 2024-07-10 12:24:56,912 Relaxation took 356.7s 2024-07-10 12:24:56,913 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=24.1 pTM=0.238 ipTM=0.199 2024-07-10 12:25:01,249 Done