2024-07-10 06:57:12,541 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-10 06:57:12,869 Running on GPU
2024-07-10 06:57:16,865 Found 6 citations for tools or databases
2024-07-10 06:57:16,865 Query 1/1: FUCO_CE027 (length 562)
2024-07-10 06:57:17,323 Sleeping for 9s. Reason: PENDING
2024-07-10 06:57:27,317 Sleeping for 8s. Reason: RUNNING
2024-07-10 06:57:35,744 Sleeping for 7s. Reason: RUNNING
2024-07-10 06:57:43,159 Sleeping for 10s. Reason: RUNNING
2024-07-10 06:57:53,582 Sleeping for 5s. Reason: RUNNING
2024-07-10 06:57:59,033 Sleeping for 5s. Reason: RUNNING
2024-07-10 06:58:04,449 Sleeping for 10s. Reason: RUNNING
2024-07-10 06:58:14,870 Sleeping for 6s. Reason: RUNNING
2024-07-10 06:58:21,296 Sleeping for 9s. Reason: RUNNING
2024-07-10 06:58:30,717 Sleeping for 7s. Reason: RUNNING
2024-07-10 06:58:38,141 Sleeping for 7s. Reason: RUNNING
2024-07-10 06:58:45,558 Sleeping for 8s. Reason: RUNNING
2024-07-10 06:59:10,294 Sleeping for 8s. Reason: PENDING
2024-07-10 06:59:18,754 Sleeping for 5s. Reason: RUNNING
2024-07-10 06:59:24,171 Sleeping for 6s. Reason: RUNNING
2024-07-10 06:59:30,599 Sleeping for 9s. Reason: RUNNING
2024-07-10 06:59:40,024 Sleeping for 6s. Reason: RUNNING
2024-07-10 06:59:48,457 Setting max_seq=508, max_extra_seq=1550
2024-07-10 07:02:27,374 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=79.2 pTM=0.776 ipTM=0.212
2024-07-10 07:02:34,348 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=79.4 pTM=0.78 ipTM=0.218 tol=6.93
2024-07-10 07:02:41,322 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=79.6 pTM=0.781 ipTM=0.228 tol=2.13
2024-07-10 07:02:48,297 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=79.6 pTM=0.784 ipTM=0.247 tol=1.37
2024-07-10 07:02:55,263 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=79.8 pTM=0.786 ipTM=0.258 tol=1.89
2024-07-10 07:03:02,236 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=79.7 pTM=0.788 ipTM=0.27 tol=1.24
2024-07-10 07:03:09,212 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=79.8 pTM=0.787 ipTM=0.262 tol=0.783
2024-07-10 07:03:16,187 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=79.6 pTM=0.786 ipTM=0.259 tol=0.53
2024-07-10 07:03:23,163 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=79.4 pTM=0.787 ipTM=0.261 tol=0.828
2024-07-10 07:03:30,141 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=79.6 pTM=0.786 ipTM=0.255 tol=0.573
2024-07-10 07:03:37,122 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=79.4 pTM=0.786 ipTM=0.255 tol=0.659
2024-07-10 07:03:44,100 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=79.6 pTM=0.786 ipTM=0.257 tol=0.828
2024-07-10 07:03:51,081 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=79.6 pTM=0.786 ipTM=0.253 tol=0.414
2024-07-10 07:03:51,081 alphafold2_multimer_v3_model_1_seed_000 took 237.5s (12 recycles)
2024-07-10 07:03:58,272 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=79 pTM=0.771 ipTM=0.18
2024-07-10 07:04:05,267 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=79.7 pTM=0.78 ipTM=0.218 tol=6.3
2024-07-10 07:04:12,270 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=79.8 pTM=0.782 ipTM=0.224 tol=1.56
2024-07-10 07:04:19,274 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.9 pTM=0.783 ipTM=0.228 tol=1.49
2024-07-10 07:04:26,281 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=79.9 pTM=0.786 ipTM=0.243 tol=1.45
2024-07-10 07:04:33,280 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80 pTM=0.785 ipTM=0.239 tol=1.1
2024-07-10 07:04:40,287 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=79.9 pTM=0.784 ipTM=0.238 tol=0.699
2024-07-10 07:04:47,286 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79.9 pTM=0.785 ipTM=0.237 tol=0.524
2024-07-10 07:04:54,286 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=79.8 pTM=0.784 ipTM=0.237 tol=0.611
2024-07-10 07:05:01,280 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.8 pTM=0.784 ipTM=0.236 tol=0.383
2024-07-10 07:05:01,281 alphafold2_multimer_v3_model_2_seed_000 took 70.0s (9 recycles)
2024-07-10 07:05:08,484 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=79 pTM=0.779 ipTM=0.234
2024-07-10 07:05:15,497 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=79.5 pTM=0.778 ipTM=0.217 tol=8.55
2024-07-10 07:05:22,504 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=79.6 pTM=0.78 ipTM=0.223 tol=3.79
2024-07-10 07:05:29,509 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.4 pTM=0.782 ipTM=0.235 tol=2.81
2024-07-10 07:05:36,520 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=79.5 pTM=0.783 ipTM=0.239 tol=2.16
2024-07-10 07:05:43,525 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=79.4 pTM=0.783 ipTM=0.241 tol=1.31
2024-07-10 07:05:50,539 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=79.6 pTM=0.782 ipTM=0.231 tol=1.62
2024-07-10 07:05:57,555 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79.4 pTM=0.782 ipTM=0.233 tol=0.669
2024-07-10 07:06:04,563 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.6 pTM=0.783 ipTM=0.239 tol=0.726
2024-07-10 07:06:11,569 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=79.5 pTM=0.781 ipTM=0.232 tol=1.11
2024-07-10 07:06:18,578 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79.6 pTM=0.783 ipTM=0.239 tol=0.842
2024-07-10 07:06:25,587 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79.5 pTM=0.782 ipTM=0.237 tol=0.611
2024-07-10 07:06:32,600 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=79.6 pTM=0.783 ipTM=0.237 tol=1.44
2024-07-10 07:06:39,609 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=79.5 pTM=0.783 ipTM=0.238 tol=1.49
2024-07-10 07:06:46,618 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.6 pTM=0.784 ipTM=0.24 tol=0.8
2024-07-10 07:06:53,627 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.4 pTM=0.782 ipTM=0.233 tol=0.942
2024-07-10 07:07:00,635 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=79.5 pTM=0.782 ipTM=0.234 tol=0.662
2024-07-10 07:07:07,643 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=79.3 pTM=0.781 ipTM=0.231 tol=0.769
2024-07-10 07:07:14,648 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.5 pTM=0.783 ipTM=0.238 tol=0.729
2024-07-10 07:07:21,659 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=79.4 pTM=0.782 ipTM=0.234 tol=1.48
2024-07-10 07:07:28,666 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.5 pTM=0.783 ipTM=0.235 tol=0.61
2024-07-10 07:07:35,671 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=79.4 pTM=0.782 ipTM=0.233 tol=0.829
2024-07-10 07:07:42,671 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=79.4 pTM=0.783 ipTM=0.238 tol=0.903
2024-07-10 07:07:49,672 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=79.2 pTM=0.782 ipTM=0.236 tol=0.71
2024-07-10 07:07:56,674 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=79.2 pTM=0.783 ipTM=0.24 tol=0.756
2024-07-10 07:08:03,676 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=79.4 pTM=0.782 ipTM=0.233 tol=2.49
2024-07-10 07:08:10,681 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=79.4 pTM=0.781 ipTM=0.227 tol=1.62
2024-07-10 07:08:17,687 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=79.4 pTM=0.781 ipTM=0.232 tol=1.35
2024-07-10 07:08:24,691 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=79.4 pTM=0.782 ipTM=0.234 tol=2.05
2024-07-10 07:08:31,695 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=79.3 pTM=0.781 ipTM=0.229 tol=0.708
2024-07-10 07:08:38,704 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=79.4 pTM=0.782 ipTM=0.231 tol=0.853
2024-07-10 07:08:38,704 alphafold2_multimer_v3_model_3_seed_000 took 217.2s (30 recycles)
2024-07-10 07:08:45,928 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=79.3 pTM=0.778 ipTM=0.203
2024-07-10 07:08:52,966 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=79.6 pTM=0.774 ipTM=0.194 tol=8.51
2024-07-10 07:09:00,008 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=79.7 pTM=0.776 ipTM=0.198 tol=4.61
2024-07-10 07:09:07,038 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=79.6 pTM=0.779 ipTM=0.204 tol=3.99
2024-07-10 07:09:14,070 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=79.8 pTM=0.784 ipTM=0.236 tol=2.87
2024-07-10 07:09:21,100 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=79.9 pTM=0.786 ipTM=0.243 tol=0.926
2024-07-10 07:09:28,136 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=79.8 pTM=0.784 ipTM=0.234 tol=0.533
2024-07-10 07:09:35,159 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=79.8 pTM=0.785 ipTM=0.246 tol=0.799
2024-07-10 07:09:42,186 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=79.6 pTM=0.784 ipTM=0.239 tol=0.601
2024-07-10 07:09:49,213 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=79.8 pTM=0.785 ipTM=0.243 tol=0.935
2024-07-10 07:09:56,240 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=79.7 pTM=0.784 ipTM=0.237 tol=0.749
2024-07-10 07:10:03,267 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=79.8 pTM=0.786 ipTM=0.246 tol=0.567
2024-07-10 07:10:10,297 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=79.8 pTM=0.784 ipTM=0.24 tol=0.551
2024-07-10 07:10:17,317 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=79.8 pTM=0.785 ipTM=0.242 tol=0.543
2024-07-10 07:10:24,343 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=79.8 pTM=0.785 ipTM=0.243 tol=0.475
2024-07-10 07:10:24,344 alphafold2_multimer_v3_model_4_seed_000 took 105.4s (14 recycles)
2024-07-10 07:10:31,542 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=78 pTM=0.777 ipTM=0.228
2024-07-10 07:10:38,562 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.9 pTM=0.776 ipTM=0.208 tol=6.66
2024-07-10 07:10:45,568 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.9 pTM=0.777 ipTM=0.215 tol=2.94
2024-07-10 07:10:52,578 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=78.9 pTM=0.781 ipTM=0.225 tol=2.24
2024-07-10 07:10:59,585 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=79 pTM=0.783 ipTM=0.237 tol=1.08
2024-07-10 07:11:06,597 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79 pTM=0.782 ipTM=0.228 tol=1.14
2024-07-10 07:11:13,601 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=78.9 pTM=0.78 ipTM=0.219 tol=0.751
2024-07-10 07:11:20,607 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=78.9 pTM=0.781 ipTM=0.22 tol=0.75
2024-07-10 07:11:27,608 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78.8 pTM=0.78 ipTM=0.221 tol=1.46
2024-07-10 07:11:34,613 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=78.9 pTM=0.78 ipTM=0.214 tol=1.2
2024-07-10 07:11:41,614 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78.8 pTM=0.781 ipTM=0.224 tol=0.833
2024-07-10 07:11:48,615 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=78.9 pTM=0.782 ipTM=0.229 tol=1.65
2024-07-10 07:11:55,615 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=78.8 pTM=0.782 ipTM=0.229 tol=0.628
2024-07-10 07:12:02,618 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.9 pTM=0.782 ipTM=0.227 tol=0.67
2024-07-10 07:12:09,618 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78.9 pTM=0.782 ipTM=0.228 tol=0.576
2024-07-10 07:12:16,614 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.9 pTM=0.782 ipTM=0.229 tol=0.621
2024-07-10 07:12:23,614 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=78.8 pTM=0.78 ipTM=0.223 tol=0.493
2024-07-10 07:12:23,615 alphafold2_multimer_v3_model_5_seed_000 took 119.1s (16 recycles)
2024-07-10 07:12:23,821 reranking models by 'multimer' metric
2024-07-10 07:12:25,638 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-10 07:12:58,444 Relaxation took 34.6s
2024-07-10 07:12:58,444 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=79.6 pTM=0.786 ipTM=0.253
2024-07-10 07:13:11,247 Relaxation took 12.8s
2024-07-10 07:13:11,247 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=79.8 pTM=0.785 ipTM=0.243
2024-07-10 07:13:42,740 Relaxation took 31.5s
2024-07-10 07:13:42,740 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=79.8 pTM=0.784 ipTM=0.236
2024-07-10 07:14:02,349 Relaxation took 19.6s
2024-07-10 07:14:02,350 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=79.4 pTM=0.782 ipTM=0.231
2024-07-10 07:14:27,709 Relaxation took 25.4s
2024-07-10 07:14:27,709 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.8 pTM=0.78 ipTM=0.223
2024-07-10 07:14:29,035 Done