2024-07-10 07:46:42,972 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 07:46:43,279 Running on GPU 2024-07-10 07:46:47,092 Found 6 citations for tools or databases 2024-07-10 07:46:47,093 Query 1/1: GAG2E_KCJ12 (length 543) 2024-07-10 07:46:47,531 Sleeping for 7s. Reason: PENDING 2024-07-10 07:46:54,954 Sleeping for 6s. Reason: RUNNING 2024-07-10 07:47:01,417 Sleeping for 10s. Reason: RUNNING 2024-07-10 07:47:12,999 Sleeping for 10s. Reason: RUNNING 2024-07-10 07:47:23,413 Sleeping for 6s. Reason: RUNNING 2024-07-10 07:47:32,570 Sleeping for 7s. Reason: PENDING 2024-07-10 07:47:39,975 Sleeping for 10s. Reason: RUNNING 2024-07-10 07:47:50,396 Sleeping for 8s. Reason: RUNNING 2024-07-10 07:48:00,546 Setting max_seq=508, max_extra_seq=1955 2024-07-10 07:50:50,175 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.8 pTM=0.454 ipTM=0.101 2024-07-10 07:50:57,550 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.4 pTM=0.426 ipTM=0.107 tol=5.73 2024-07-10 07:51:04,935 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.9 pTM=0.418 ipTM=0.104 tol=3.97 2024-07-10 07:51:12,323 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.7 pTM=0.413 ipTM=0.103 tol=2.78 2024-07-10 07:51:19,723 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.8 pTM=0.415 ipTM=0.103 tol=1.9 2024-07-10 07:51:27,129 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.6 pTM=0.411 ipTM=0.104 tol=2.36 2024-07-10 07:51:34,533 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.7 pTM=0.414 ipTM=0.107 tol=2.28 2024-07-10 07:51:41,942 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.7 pTM=0.412 ipTM=0.106 tol=1.92 2024-07-10 07:51:49,354 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58 pTM=0.415 ipTM=0.108 tol=1.72 2024-07-10 07:51:56,770 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=57.8 pTM=0.412 ipTM=0.109 tol=1.11 2024-07-10 07:52:04,187 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57.8 pTM=0.412 ipTM=0.11 tol=1.51 2024-07-10 07:52:11,599 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57.8 pTM=0.414 ipTM=0.111 tol=1.65 2024-07-10 07:52:19,013 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.9 pTM=0.415 ipTM=0.11 tol=1.47 2024-07-10 07:52:26,430 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=57.8 pTM=0.417 ipTM=0.111 tol=2.69 2024-07-10 07:52:33,852 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.9 pTM=0.417 ipTM=0.109 tol=2.55 2024-07-10 07:52:41,274 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.1 pTM=0.416 ipTM=0.111 tol=2.55 2024-07-10 07:52:48,696 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58 pTM=0.416 ipTM=0.113 tol=2.79 2024-07-10 07:52:56,122 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.1 pTM=0.414 ipTM=0.112 tol=2.74 2024-07-10 07:53:03,544 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58 pTM=0.416 ipTM=0.114 tol=2.81 2024-07-10 07:53:10,967 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.1 pTM=0.418 ipTM=0.114 tol=2.72 2024-07-10 07:53:18,395 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.9 pTM=0.414 ipTM=0.112 tol=4.23 2024-07-10 07:53:25,823 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58 pTM=0.416 ipTM=0.111 tol=2.2 2024-07-10 07:53:33,251 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.1 pTM=0.417 ipTM=0.111 tol=1.29 2024-07-10 07:53:40,682 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58.2 pTM=0.417 ipTM=0.111 tol=1.5 2024-07-10 07:53:48,114 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58.2 pTM=0.418 ipTM=0.111 tol=0.688 2024-07-10 07:53:55,543 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.5 pTM=0.421 ipTM=0.111 tol=1.08 2024-07-10 07:54:02,975 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58.1 pTM=0.419 ipTM=0.111 tol=1.1 2024-07-10 07:54:10,405 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58 pTM=0.417 ipTM=0.109 tol=1.23 2024-07-10 07:54:17,841 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.2 pTM=0.42 ipTM=0.11 tol=0.865 2024-07-10 07:54:25,275 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.2 pTM=0.417 ipTM=0.109 tol=1.05 2024-07-10 07:54:32,707 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.1 pTM=0.419 ipTM=0.11 tol=1.87 2024-07-10 07:54:32,707 alphafold2_multimer_v3_model_1_seed_000 took 387.6s (30 recycles) 2024-07-10 07:54:40,350 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.2 pTM=0.453 ipTM=0.1 2024-07-10 07:54:47,787 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.2 pTM=0.445 ipTM=0.107 tol=7.97 2024-07-10 07:54:55,235 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.9 pTM=0.445 ipTM=0.111 tol=3.81 2024-07-10 07:55:02,685 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.2 pTM=0.442 ipTM=0.114 tol=4.43 2024-07-10 07:55:10,144 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.3 pTM=0.443 ipTM=0.112 tol=3.59 2024-07-10 07:55:17,601 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58 pTM=0.434 ipTM=0.113 tol=2.55 2024-07-10 07:55:25,056 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58 pTM=0.438 ipTM=0.111 tol=4.07 2024-07-10 07:55:32,516 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.8 pTM=0.434 ipTM=0.109 tol=5.27 2024-07-10 07:55:39,981 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.4 pTM=0.441 ipTM=0.113 tol=3.49 2024-07-10 07:55:47,441 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.3 pTM=0.442 ipTM=0.117 tol=2.16 2024-07-10 07:55:54,900 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58 pTM=0.44 ipTM=0.12 tol=1.61 2024-07-10 07:56:02,358 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.2 pTM=0.443 ipTM=0.123 tol=1.37 2024-07-10 07:56:09,816 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.3 pTM=0.446 ipTM=0.124 tol=1.01 2024-07-10 07:56:17,268 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.2 pTM=0.443 ipTM=0.125 tol=1.83 2024-07-10 07:56:24,727 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.1 pTM=0.441 ipTM=0.121 tol=1 2024-07-10 07:56:32,183 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.4 pTM=0.442 ipTM=0.123 tol=1.3 2024-07-10 07:56:39,637 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.2 pTM=0.441 ipTM=0.122 tol=1.4 2024-07-10 07:56:47,090 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.2 pTM=0.434 ipTM=0.121 tol=1.21 2024-07-10 07:56:54,546 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.2 pTM=0.435 ipTM=0.121 tol=1.16 2024-07-10 07:57:02,001 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.3 pTM=0.436 ipTM=0.118 tol=1.34 2024-07-10 07:57:09,462 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.7 pTM=0.438 ipTM=0.121 tol=1.47 2024-07-10 07:57:16,922 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.4 pTM=0.437 ipTM=0.121 tol=1.72 2024-07-10 07:57:24,381 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.5 pTM=0.438 ipTM=0.12 tol=0.95 2024-07-10 07:57:31,843 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.7 pTM=0.44 ipTM=0.12 tol=0.723 2024-07-10 07:57:39,304 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.5 pTM=0.44 ipTM=0.122 tol=0.781 2024-07-10 07:57:46,765 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.5 pTM=0.437 ipTM=0.12 tol=1.41 2024-07-10 07:57:54,220 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.4 pTM=0.439 ipTM=0.12 tol=1.22 2024-07-10 07:58:01,673 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.4 pTM=0.437 ipTM=0.119 tol=1.1 2024-07-10 07:58:09,131 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.4 pTM=0.439 ipTM=0.12 tol=1.16 2024-07-10 07:58:16,586 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.6 pTM=0.44 ipTM=0.12 tol=1.38 2024-07-10 07:58:24,043 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.7 pTM=0.443 ipTM=0.122 tol=1.04 2024-07-10 07:58:24,044 alphafold2_multimer_v3_model_2_seed_000 took 231.1s (30 recycles) 2024-07-10 07:58:31,684 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.1 pTM=0.448 ipTM=0.0906 2024-07-10 07:58:39,124 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58 pTM=0.432 ipTM=0.0978 tol=7.86 2024-07-10 07:58:46,569 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.2 pTM=0.425 ipTM=0.109 tol=5.26 2024-07-10 07:58:54,011 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.2 pTM=0.427 ipTM=0.114 tol=2.62 2024-07-10 07:59:01,456 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.4 pTM=0.431 ipTM=0.116 tol=2.25 2024-07-10 07:59:08,898 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.2 pTM=0.428 ipTM=0.112 tol=1.35 2024-07-10 07:59:16,340 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.2 pTM=0.43 ipTM=0.113 tol=1.1 2024-07-10 07:59:23,778 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.2 pTM=0.427 ipTM=0.112 tol=0.841 2024-07-10 07:59:31,220 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.6 pTM=0.431 ipTM=0.112 tol=1.47 2024-07-10 07:59:38,662 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.3 pTM=0.429 ipTM=0.113 tol=1.23 2024-07-10 07:59:46,102 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.3 pTM=0.429 ipTM=0.116 tol=0.771 2024-07-10 07:59:53,545 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.1 pTM=0.425 ipTM=0.113 tol=0.933 2024-07-10 08:00:00,985 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.1 pTM=0.429 ipTM=0.115 tol=0.839 2024-07-10 08:00:08,423 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57 pTM=0.427 ipTM=0.114 tol=1.27 2024-07-10 08:00:15,870 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.6 pTM=0.432 ipTM=0.112 tol=0.775 2024-07-10 08:00:23,310 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.1 pTM=0.428 ipTM=0.113 tol=1.18 2024-07-10 08:00:30,752 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.1 pTM=0.429 ipTM=0.112 tol=1.14 2024-07-10 08:00:38,192 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.2 pTM=0.429 ipTM=0.113 tol=0.659 2024-07-10 08:00:45,634 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.1 pTM=0.43 ipTM=0.113 tol=0.96 2024-07-10 08:00:53,073 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.4 pTM=0.431 ipTM=0.113 tol=1.01 2024-07-10 08:01:00,510 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.2 pTM=0.429 ipTM=0.112 tol=0.839 2024-07-10 08:01:07,951 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.3 pTM=0.431 ipTM=0.113 tol=0.889 2024-07-10 08:01:15,396 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.4 pTM=0.432 ipTM=0.111 tol=0.997 2024-07-10 08:01:22,846 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.4 pTM=0.433 ipTM=0.113 tol=0.796 2024-07-10 08:01:30,293 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.4 pTM=0.433 ipTM=0.114 tol=1.1 2024-07-10 08:01:37,742 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.4 pTM=0.431 ipTM=0.111 tol=0.894 2024-07-10 08:01:45,185 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.2 pTM=0.429 ipTM=0.115 tol=1.91 2024-07-10 08:01:52,631 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.3 pTM=0.429 ipTM=0.113 tol=1.39 2024-07-10 08:02:00,076 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.9 pTM=0.427 ipTM=0.113 tol=1.11 2024-07-10 08:02:07,518 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.2 pTM=0.428 ipTM=0.112 tol=0.661 2024-07-10 08:02:14,963 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.4 pTM=0.432 ipTM=0.111 tol=0.688 2024-07-10 08:02:14,964 alphafold2_multimer_v3_model_3_seed_000 took 230.7s (30 recycles) 2024-07-10 08:02:22,586 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.2 pTM=0.439 ipTM=0.0913 2024-07-10 08:02:30,023 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.4 pTM=0.432 ipTM=0.107 tol=9.69 2024-07-10 08:02:37,462 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.3 pTM=0.433 ipTM=0.11 tol=4.38 2024-07-10 08:02:44,896 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.4 pTM=0.434 ipTM=0.116 tol=5.99 2024-07-10 08:02:52,330 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.8 pTM=0.443 ipTM=0.126 tol=4.42 2024-07-10 08:02:59,762 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.9 pTM=0.443 ipTM=0.129 tol=3.08 2024-07-10 08:03:07,193 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.6 pTM=0.444 ipTM=0.131 tol=3.59 2024-07-10 08:03:14,624 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.4 pTM=0.44 ipTM=0.131 tol=2.07 2024-07-10 08:03:22,058 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.1 pTM=0.448 ipTM=0.133 tol=3.62 2024-07-10 08:03:29,493 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.8 pTM=0.442 ipTM=0.133 tol=1.09 2024-07-10 08:03:36,921 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.7 pTM=0.444 ipTM=0.135 tol=1.23 2024-07-10 08:03:44,350 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.5 pTM=0.44 ipTM=0.137 tol=2.76 2024-07-10 08:03:51,783 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.4 pTM=0.441 ipTM=0.134 tol=3.49 2024-07-10 08:03:59,213 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.4 pTM=0.444 ipTM=0.136 tol=2.91 2024-07-10 08:04:06,644 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.7 pTM=0.446 ipTM=0.135 tol=2.86 2024-07-10 08:04:14,073 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.6 pTM=0.445 ipTM=0.136 tol=1.12 2024-07-10 08:04:21,499 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.5 pTM=0.445 ipTM=0.134 tol=3.76 2024-07-10 08:04:28,931 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.6 pTM=0.441 ipTM=0.133 tol=3.92 2024-07-10 08:04:36,363 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.6 pTM=0.444 ipTM=0.137 tol=1.6 2024-07-10 08:04:43,795 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.8 pTM=0.445 ipTM=0.133 tol=1.41 2024-07-10 08:04:51,229 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.8 pTM=0.443 ipTM=0.133 tol=0.858 2024-07-10 08:04:58,660 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.8 pTM=0.445 ipTM=0.134 tol=1.31 2024-07-10 08:05:06,092 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58 pTM=0.446 ipTM=0.134 tol=1.93 2024-07-10 08:05:13,526 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.2 pTM=0.446 ipTM=0.134 tol=1.85 2024-07-10 08:05:20,957 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.8 pTM=0.443 ipTM=0.134 tol=4.07 2024-07-10 08:05:28,386 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.7 pTM=0.441 ipTM=0.133 tol=3.52 2024-07-10 08:05:35,817 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.9 pTM=0.444 ipTM=0.135 tol=1.34 2024-07-10 08:05:43,252 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.9 pTM=0.443 ipTM=0.135 tol=1.68 2024-07-10 08:05:50,687 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.4 pTM=0.441 ipTM=0.132 tol=4.05 2024-07-10 08:05:58,121 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.9 pTM=0.442 ipTM=0.133 tol=3.96 2024-07-10 08:06:05,557 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58 pTM=0.448 ipTM=0.134 tol=2.26 2024-07-10 08:06:05,557 alphafold2_multimer_v3_model_4_seed_000 took 230.4s (30 recycles) 2024-07-10 08:06:13,210 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.1 pTM=0.43 ipTM=0.11 2024-07-10 08:06:20,667 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.1 pTM=0.418 ipTM=0.103 tol=7.56 2024-07-10 08:06:28,127 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.4 pTM=0.414 ipTM=0.0987 tol=7.46 2024-07-10 08:06:35,589 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.6 pTM=0.412 ipTM=0.101 tol=7.97 2024-07-10 08:06:43,055 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.7 pTM=0.416 ipTM=0.104 tol=6.89 2024-07-10 08:06:50,521 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.7 pTM=0.414 ipTM=0.104 tol=4.96 2024-07-10 08:06:57,985 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.7 pTM=0.418 ipTM=0.104 tol=4.16 2024-07-10 08:07:05,446 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.4 pTM=0.413 ipTM=0.0999 tol=6.27 2024-07-10 08:07:12,913 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.5 pTM=0.421 ipTM=0.105 tol=3.9 2024-07-10 08:07:20,376 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.8 pTM=0.418 ipTM=0.103 tol=3.84 2024-07-10 08:07:27,840 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.3 pTM=0.415 ipTM=0.103 tol=5.31 2024-07-10 08:07:35,300 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.3 pTM=0.414 ipTM=0.102 tol=4.71 2024-07-10 08:07:42,766 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.3 pTM=0.416 ipTM=0.102 tol=4.13 2024-07-10 08:07:50,228 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.5 pTM=0.415 ipTM=0.103 tol=2.98 2024-07-10 08:07:57,695 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.7 pTM=0.418 ipTM=0.102 tol=1.5 2024-07-10 08:08:05,157 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.3 pTM=0.417 ipTM=0.104 tol=2.14 2024-07-10 08:08:12,614 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.2 pTM=0.415 ipTM=0.102 tol=3.31 2024-07-10 08:08:20,078 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.2 pTM=0.413 ipTM=0.101 tol=4.48 2024-07-10 08:08:27,542 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.3 pTM=0.418 ipTM=0.107 tol=7.65 2024-07-10 08:08:35,008 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.5 pTM=0.419 ipTM=0.103 tol=3.05 2024-07-10 08:08:42,472 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.6 pTM=0.417 ipTM=0.103 tol=1.7 2024-07-10 08:08:49,937 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.5 pTM=0.418 ipTM=0.101 tol=2.06 2024-07-10 08:08:57,399 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.5 pTM=0.417 ipTM=0.102 tol=1.54 2024-07-10 08:09:04,864 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.7 pTM=0.417 ipTM=0.101 tol=2.55 2024-07-10 08:09:12,333 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.7 pTM=0.418 ipTM=0.102 tol=2.06 2024-07-10 08:09:19,801 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.6 pTM=0.417 ipTM=0.101 tol=2.63 2024-07-10 08:09:27,266 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.7 pTM=0.417 ipTM=0.105 tol=2.94 2024-07-10 08:09:34,736 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.8 pTM=0.417 ipTM=0.102 tol=1.66 2024-07-10 08:09:42,199 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.2 pTM=0.415 ipTM=0.101 tol=4.98 2024-07-10 08:09:49,667 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.6 pTM=0.416 ipTM=0.101 tol=4.35 2024-07-10 08:09:57,135 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56.6 pTM=0.419 ipTM=0.103 tol=2.64 2024-07-10 08:09:57,135 alphafold2_multimer_v3_model_5_seed_000 took 231.4s (30 recycles) 2024-07-10 08:09:57,337 reranking models by 'multimer' metric 2024-07-10 08:10:00,341 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 08:10:23,913 Relaxation took 26.6s 2024-07-10 08:10:23,913 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58 pTM=0.448 ipTM=0.134 2024-07-10 08:10:57,392 Relaxation took 33.5s 2024-07-10 08:10:57,392 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.7 pTM=0.443 ipTM=0.122 2024-07-10 08:11:30,047 Relaxation took 32.7s 2024-07-10 08:11:30,047 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.4 pTM=0.432 ipTM=0.111 2024-07-10 08:11:49,339 Relaxation took 19.3s 2024-07-10 08:11:49,339 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.1 pTM=0.419 ipTM=0.11 2024-07-10 08:12:10,225 Relaxation took 20.9s 2024-07-10 08:12:10,225 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56.6 pTM=0.419 ipTM=0.103 2024-07-10 08:12:11,327 Done