2024-07-10 07:54:58,056 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-10 07:54:58,370 Running on GPU 2024-07-10 07:55:02,077 Found 6 citations for tools or databases 2024-07-10 07:55:02,077 Query 1/1: GAGE6_DRC12 (length 327) 2024-07-10 07:55:02,532 Sleeping for 7s. Reason: PENDING 2024-07-10 07:55:09,965 Sleeping for 10s. Reason: RUNNING 2024-07-10 07:55:21,545 Sleeping for 9s. Reason: PENDING 2024-07-10 07:55:32,355 Setting max_seq=508, max_extra_seq=785 2024-07-10 07:58:22,315 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.8 pTM=0.331 ipTM=0.0948 2024-07-10 07:58:25,168 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.7 pTM=0.338 ipTM=0.0956 tol=9.28 2024-07-10 07:58:28,018 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.9 pTM=0.335 ipTM=0.0889 tol=7.84 2024-07-10 07:58:30,862 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.6 pTM=0.335 ipTM=0.0886 tol=4.87 2024-07-10 07:58:33,707 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.7 pTM=0.331 ipTM=0.0868 tol=5.25 2024-07-10 07:58:36,553 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.8 pTM=0.333 ipTM=0.0864 tol=5.23 2024-07-10 07:58:39,397 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.1 pTM=0.331 ipTM=0.0862 tol=3.85 2024-07-10 07:58:42,243 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.8 pTM=0.332 ipTM=0.0851 tol=4.68 2024-07-10 07:58:45,092 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.3 pTM=0.331 ipTM=0.0847 tol=5.41 2024-07-10 07:58:47,938 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.7 pTM=0.333 ipTM=0.0872 tol=5.57 2024-07-10 07:58:50,787 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.6 pTM=0.333 ipTM=0.0892 tol=1.84 2024-07-10 07:58:53,637 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.9 pTM=0.33 ipTM=0.087 tol=5.2 2024-07-10 07:58:56,481 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.6 pTM=0.331 ipTM=0.0857 tol=6.43 2024-07-10 07:58:59,328 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.5 pTM=0.331 ipTM=0.086 tol=2.88 2024-07-10 07:59:02,174 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.9 pTM=0.332 ipTM=0.0865 tol=4.05 2024-07-10 07:59:05,021 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.9 pTM=0.331 ipTM=0.0853 tol=2.61 2024-07-10 07:59:07,868 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.7 pTM=0.333 ipTM=0.0884 tol=1.62 2024-07-10 07:59:10,715 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.8 pTM=0.332 ipTM=0.0863 tol=1.45 2024-07-10 07:59:13,563 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.6 pTM=0.332 ipTM=0.0866 tol=3.95 2024-07-10 07:59:16,412 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.1 pTM=0.332 ipTM=0.0862 tol=7.21 2024-07-10 07:59:19,258 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64 pTM=0.333 ipTM=0.0859 tol=6.83 2024-07-10 07:59:22,103 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.9 pTM=0.33 ipTM=0.0829 tol=3.35 2024-07-10 07:59:24,951 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.1 pTM=0.332 ipTM=0.0853 tol=3.02 2024-07-10 07:59:27,798 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.8 pTM=0.333 ipTM=0.0826 tol=5.5 2024-07-10 07:59:30,648 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.6 pTM=0.333 ipTM=0.0842 tol=3.13 2024-07-10 07:59:33,492 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.8 pTM=0.331 ipTM=0.0854 tol=5.07 2024-07-10 07:59:36,341 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.7 pTM=0.331 ipTM=0.0865 tol=1.81 2024-07-10 07:59:39,187 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64 pTM=0.332 ipTM=0.0855 tol=1.44 2024-07-10 07:59:42,032 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.5 pTM=0.33 ipTM=0.0844 tol=3.64 2024-07-10 07:59:44,875 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.7 pTM=0.331 ipTM=0.0843 tol=3.75 2024-07-10 07:59:47,724 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.4 pTM=0.331 ipTM=0.0881 tol=4.08 2024-07-10 07:59:47,724 alphafold2_multimer_v3_model_1_seed_000 took 250.3s (30 recycles) 2024-07-10 07:59:50,659 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.9 pTM=0.338 ipTM=0.0831 2024-07-10 07:59:53,500 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.3 pTM=0.344 ipTM=0.105 tol=9.84 2024-07-10 07:59:56,336 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.4 pTM=0.344 ipTM=0.114 tol=3.13 2024-07-10 07:59:59,170 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.6 pTM=0.346 ipTM=0.114 tol=1.72 2024-07-10 08:00:02,009 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.5 pTM=0.342 ipTM=0.12 tol=1.08 2024-07-10 08:00:04,845 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.9 pTM=0.344 ipTM=0.124 tol=0.79 2024-07-10 08:00:07,678 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.7 pTM=0.344 ipTM=0.126 tol=1.07 2024-07-10 08:00:10,512 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.8 pTM=0.344 ipTM=0.128 tol=1.59 2024-07-10 08:00:13,349 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.9 pTM=0.341 ipTM=0.127 tol=1.63 2024-07-10 08:00:16,185 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.9 pTM=0.342 ipTM=0.128 tol=1.38 2024-07-10 08:00:19,021 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.8 pTM=0.344 ipTM=0.128 tol=1.32 2024-07-10 08:00:21,857 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.7 pTM=0.344 ipTM=0.13 tol=1.41 2024-07-10 08:00:24,693 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.6 pTM=0.343 ipTM=0.13 tol=1.06 2024-07-10 08:00:27,531 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.7 pTM=0.346 ipTM=0.131 tol=1.15 2024-07-10 08:00:30,367 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.9 pTM=0.344 ipTM=0.128 tol=1.28 2024-07-10 08:00:33,200 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64 pTM=0.342 ipTM=0.125 tol=0.655 2024-07-10 08:00:36,035 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.7 pTM=0.345 ipTM=0.127 tol=0.717 2024-07-10 08:00:38,871 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.7 pTM=0.343 ipTM=0.125 tol=0.849 2024-07-10 08:00:41,709 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.8 pTM=0.343 ipTM=0.123 tol=0.736 2024-07-10 08:00:44,547 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.9 pTM=0.342 ipTM=0.123 tol=1.24 2024-07-10 08:00:47,382 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.1 pTM=0.345 ipTM=0.126 tol=1.23 2024-07-10 08:00:50,219 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64 pTM=0.341 ipTM=0.124 tol=2.26 2024-07-10 08:00:53,055 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64 pTM=0.343 ipTM=0.128 tol=2.76 2024-07-10 08:00:55,891 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64 pTM=0.342 ipTM=0.126 tol=0.696 2024-07-10 08:00:58,728 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.9 pTM=0.344 ipTM=0.128 tol=1.08 2024-07-10 08:01:01,565 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.9 pTM=0.344 ipTM=0.13 tol=0.989 2024-07-10 08:01:04,402 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.6 pTM=0.34 ipTM=0.125 tol=0.874 2024-07-10 08:01:07,236 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.8 pTM=0.342 ipTM=0.129 tol=0.902 2024-07-10 08:01:10,073 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.7 pTM=0.343 ipTM=0.127 tol=2.18 2024-07-10 08:01:12,909 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.7 pTM=0.344 ipTM=0.126 tol=2.09 2024-07-10 08:01:15,749 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.7 pTM=0.345 ipTM=0.128 tol=0.904 2024-07-10 08:01:15,749 alphafold2_multimer_v3_model_2_seed_000 took 87.9s (30 recycles) 2024-07-10 08:01:18,686 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.1 pTM=0.354 ipTM=0.0916 2024-07-10 08:01:21,534 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.1 pTM=0.357 ipTM=0.106 tol=7.72 2024-07-10 08:01:24,375 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.6 pTM=0.349 ipTM=0.102 tol=4.34 2024-07-10 08:01:27,221 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.9 pTM=0.349 ipTM=0.105 tol=8.89 2024-07-10 08:01:30,067 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.9 pTM=0.348 ipTM=0.107 tol=2.22 2024-07-10 08:01:32,915 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.1 pTM=0.351 ipTM=0.105 tol=2.18 2024-07-10 08:01:35,761 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.1 pTM=0.349 ipTM=0.106 tol=1.44 2024-07-10 08:01:38,606 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.2 pTM=0.348 ipTM=0.101 tol=1.24 2024-07-10 08:01:41,452 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.4 pTM=0.348 ipTM=0.103 tol=1.43 2024-07-10 08:01:44,298 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.3 pTM=0.349 ipTM=0.104 tol=1.38 2024-07-10 08:01:47,144 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.2 pTM=0.351 ipTM=0.105 tol=1.19 2024-07-10 08:01:49,989 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.4 pTM=0.349 ipTM=0.1 tol=1.22 2024-07-10 08:01:52,833 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.7 pTM=0.349 ipTM=0.101 tol=6.45 2024-07-10 08:01:55,678 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.6 pTM=0.349 ipTM=0.102 tol=1.39 2024-07-10 08:01:58,529 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.3 pTM=0.348 ipTM=0.1 tol=6.33 2024-07-10 08:02:01,374 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.2 pTM=0.346 ipTM=0.103 tol=1.8 2024-07-10 08:02:04,220 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.4 pTM=0.348 ipTM=0.104 tol=5.78 2024-07-10 08:02:07,066 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.4 pTM=0.349 ipTM=0.102 tol=1.82 2024-07-10 08:02:09,911 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.2 pTM=0.348 ipTM=0.103 tol=6.5 2024-07-10 08:02:12,754 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.3 pTM=0.348 ipTM=0.101 tol=1.48 2024-07-10 08:02:15,605 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.2 pTM=0.348 ipTM=0.101 tol=1.88 2024-07-10 08:02:18,448 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.1 pTM=0.345 ipTM=0.0994 tol=1.28 2024-07-10 08:02:21,294 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.4 pTM=0.347 ipTM=0.102 tol=3.31 2024-07-10 08:02:24,142 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.2 pTM=0.346 ipTM=0.0972 tol=3.55 2024-07-10 08:02:26,991 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.1 pTM=0.347 ipTM=0.101 tol=1.03 2024-07-10 08:02:29,836 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.5 pTM=0.347 ipTM=0.101 tol=5.92 2024-07-10 08:02:32,680 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.2 pTM=0.348 ipTM=0.103 tol=5.82 2024-07-10 08:02:35,526 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.2 pTM=0.347 ipTM=0.102 tol=1.59 2024-07-10 08:02:38,369 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.1 pTM=0.348 ipTM=0.104 tol=1.6 2024-07-10 08:02:41,215 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.1 pTM=0.348 ipTM=0.102 tol=2.32 2024-07-10 08:02:44,061 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.2 pTM=0.35 ipTM=0.102 tol=0.897 2024-07-10 08:02:44,061 alphafold2_multimer_v3_model_3_seed_000 took 88.2s (30 recycles) 2024-07-10 08:02:46,994 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.2 pTM=0.34 ipTM=0.09 2024-07-10 08:02:49,833 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.8 pTM=0.348 ipTM=0.103 tol=6.67 2024-07-10 08:02:52,671 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.9 pTM=0.341 ipTM=0.0909 tol=2.59 2024-07-10 08:02:55,509 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64 pTM=0.342 ipTM=0.092 tol=4.32 2024-07-10 08:02:58,347 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64 pTM=0.344 ipTM=0.0945 tol=2.92 2024-07-10 08:03:01,188 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.2 pTM=0.343 ipTM=0.097 tol=1.2 2024-07-10 08:03:04,026 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.1 pTM=0.34 ipTM=0.0967 tol=2.9 2024-07-10 08:03:06,864 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.2 pTM=0.344 ipTM=0.1 tol=3.22 2024-07-10 08:03:09,701 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.2 pTM=0.341 ipTM=0.097 tol=1.86 2024-07-10 08:03:12,539 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64 pTM=0.342 ipTM=0.0989 tol=2.91 2024-07-10 08:03:15,378 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.2 pTM=0.345 ipTM=0.102 tol=3.41 2024-07-10 08:03:18,216 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.3 pTM=0.344 ipTM=0.1 tol=1.89 2024-07-10 08:03:21,053 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64 pTM=0.343 ipTM=0.0984 tol=1.33 2024-07-10 08:03:23,888 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.1 pTM=0.341 ipTM=0.0983 tol=1.18 2024-07-10 08:03:26,726 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.2 pTM=0.344 ipTM=0.0992 tol=2.71 2024-07-10 08:03:29,564 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64 pTM=0.344 ipTM=0.098 tol=0.646 2024-07-10 08:03:32,404 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.1 pTM=0.342 ipTM=0.103 tol=3.61 2024-07-10 08:03:35,241 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64 pTM=0.341 ipTM=0.0994 tol=1.11 2024-07-10 08:03:38,077 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.1 pTM=0.342 ipTM=0.101 tol=1.11 2024-07-10 08:03:40,914 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64 pTM=0.343 ipTM=0.0987 tol=3.82 2024-07-10 08:03:43,752 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.2 pTM=0.346 ipTM=0.1 tol=3.67 2024-07-10 08:03:46,591 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.1 pTM=0.342 ipTM=0.1 tol=3.17 2024-07-10 08:03:49,433 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.9 pTM=0.341 ipTM=0.0999 tol=1.38 2024-07-10 08:03:52,271 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.9 pTM=0.342 ipTM=0.0963 tol=2.28 2024-07-10 08:03:55,110 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64 pTM=0.342 ipTM=0.099 tol=2.51 2024-07-10 08:03:57,948 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64 pTM=0.341 ipTM=0.1 tol=2.21 2024-07-10 08:04:00,784 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64 pTM=0.343 ipTM=0.1 tol=1.04 2024-07-10 08:04:03,623 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64 pTM=0.343 ipTM=0.1 tol=3.25 2024-07-10 08:04:06,461 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.1 pTM=0.342 ipTM=0.102 tol=3.04 2024-07-10 08:04:09,297 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.1 pTM=0.344 ipTM=0.101 tol=1.27 2024-07-10 08:04:12,134 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64 pTM=0.344 ipTM=0.104 tol=1.08 2024-07-10 08:04:12,135 alphafold2_multimer_v3_model_4_seed_000 took 88.0s (30 recycles) 2024-07-10 08:04:15,078 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.9 pTM=0.352 ipTM=0.0825 2024-07-10 08:04:17,931 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.6 pTM=0.359 ipTM=0.0905 tol=5.08 2024-07-10 08:04:20,780 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.5 pTM=0.355 ipTM=0.086 tol=4.61 2024-07-10 08:04:23,631 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.7 pTM=0.356 ipTM=0.0859 tol=5.57 2024-07-10 08:04:26,483 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.6 pTM=0.356 ipTM=0.0885 tol=6.7 2024-07-10 08:04:29,333 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.9 pTM=0.357 ipTM=0.0882 tol=1.96 2024-07-10 08:04:32,182 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.1 pTM=0.355 ipTM=0.0911 tol=1.48 2024-07-10 08:04:35,027 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64 pTM=0.355 ipTM=0.0884 tol=2.42 2024-07-10 08:04:37,875 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.4 pTM=0.355 ipTM=0.0909 tol=2.16 2024-07-10 08:04:40,724 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.1 pTM=0.357 ipTM=0.0906 tol=2.27 2024-07-10 08:04:43,573 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.1 pTM=0.356 ipTM=0.0891 tol=2.37 2024-07-10 08:04:46,423 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64 pTM=0.357 ipTM=0.0886 tol=2.03 2024-07-10 08:04:49,274 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.8 pTM=0.357 ipTM=0.0903 tol=1.74 2024-07-10 08:04:52,123 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.7 pTM=0.357 ipTM=0.0918 tol=1.71 2024-07-10 08:04:54,977 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.8 pTM=0.357 ipTM=0.0895 tol=1.46 2024-07-10 08:04:57,823 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.9 pTM=0.357 ipTM=0.0893 tol=2.59 2024-07-10 08:05:00,677 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.9 pTM=0.357 ipTM=0.0903 tol=3.21 2024-07-10 08:05:03,527 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.8 pTM=0.358 ipTM=0.0906 tol=2.9 2024-07-10 08:05:06,382 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.8 pTM=0.359 ipTM=0.091 tol=0.898 2024-07-10 08:05:09,232 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.1 pTM=0.354 ipTM=0.0883 tol=2.74 2024-07-10 08:05:12,083 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.8 pTM=0.358 ipTM=0.0902 tol=2.68 2024-07-10 08:05:14,932 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.8 pTM=0.354 ipTM=0.0903 tol=1.34 2024-07-10 08:05:17,786 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.9 pTM=0.358 ipTM=0.0905 tol=1.13 2024-07-10 08:05:20,636 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.8 pTM=0.357 ipTM=0.0899 tol=1.19 2024-07-10 08:05:23,486 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.9 pTM=0.357 ipTM=0.0912 tol=1.07 2024-07-10 08:05:26,337 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.8 pTM=0.358 ipTM=0.093 tol=1.13 2024-07-10 08:05:29,187 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.1 pTM=0.356 ipTM=0.09 tol=3.16 2024-07-10 08:05:32,037 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.9 pTM=0.357 ipTM=0.0933 tol=3.29 2024-07-10 08:05:34,888 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.9 pTM=0.358 ipTM=0.0945 tol=2.97 2024-07-10 08:05:37,737 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.8 pTM=0.359 ipTM=0.0928 tol=3.24 2024-07-10 08:05:40,587 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.8 pTM=0.358 ipTM=0.0914 tol=1.44 2024-07-10 08:05:40,588 alphafold2_multimer_v3_model_5_seed_000 took 88.4s (30 recycles) 2024-07-10 08:05:40,674 reranking models by 'multimer' metric 2024-07-10 08:05:43,462 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-10 08:05:55,471 Relaxation took 14.8s 2024-07-10 08:05:55,472 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.7 pTM=0.345 ipTM=0.128 2024-07-10 08:06:01,750 Relaxation took 6.3s 2024-07-10 08:06:01,750 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64 pTM=0.344 ipTM=0.104 2024-07-10 08:06:15,436 Relaxation took 13.7s 2024-07-10 08:06:15,436 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.2 pTM=0.35 ipTM=0.102 2024-07-10 08:06:25,771 Relaxation took 10.3s 2024-07-10 08:06:25,771 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.8 pTM=0.358 ipTM=0.0914 2024-07-10 08:06:32,123 Relaxation took 6.4s 2024-07-10 08:06:32,124 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.4 pTM=0.331 ipTM=0.0881 2024-07-10 08:06:32,939 Done